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Bousema, T (2024). Data from: Quantification of sporozoite expelling by Anopheles mosquitoes infected with laboratory and naturally circulating P. falciparum gametocytes. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.dbrv15f89

Keegan, S, Pedersen, A and Fenton, A (2024). The impact of within-host coinfection interactions on between-host parasite transmission dynamics varies with spatial scale. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.tdz08kq68

Lim, A and Brady, OJ (2024). OpenDengue/master-repo. [Data Collection]. GitHub. https://github.com/OpenDengue/master-repo

Hodgson, D (2024). dchodge/rsvmabmat. [Data Collection]. GitHub. https://github.com/dchodge/rsvmabmat

Midões, C, De Cian, E, Pasini, G, Pesenti, S and Mistry, M (2024). SHARE-ENV - Exposure to Environmental Hazards. [Data Collection]. Mendeley Data. https://doi.org/10.17632/nx2vhfyrm6.1

Foster, N (2024). ASCENT-Ethiopia health economics. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003721.

Ndzomo, P, Tchatchouang, S, Tabah, EN, Njamnshi, T, Tsanga, MVN, Bondi, JA, Handley, R, Beiras, CG, Tchatchueng, J, Müller, C, Lüert, S, Knauf, S, Boyomo, O, Harding-Esch, E, Mitja, O, Crucitti, T, Marks, M and Eyangoh, S (2023). Distribution of H. ducreyi and T. pallidum positive participants per site. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011553.s001

Ndzomo, P, Tchatchouang, S, Tabah, EN, Njamnshi, T, Tsanga, MVN, Bondi, JA, Handley, R, Beiras, CG, Tchatchueng, J, Müller, C, Lüert, S, Knauf, S, Boyomo, O, Harding-Esch, E, Mitja, O, Crucitti, T, Marks, M and Eyangoh, S (2023). Socio-demographic characteristics of participants. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011553.s002

Phelan, J and Thorpe, J (2023). jodyphelan/malaria-profiler. [Data Collection]. GitHub. https://github.com/jodyphelan/Malaria-Profiler

Kranzer, K (2023). Data for: "Comprehensive occupational health services for healthcare workers in Zimbabwe during the SARS-CoV-2 pandemic". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003679.

Fu, H (2023). hfu915/dynamice_mrmaps. [Data Collection]. Github. https://github.com/hfu915/dynamice_mrmaps

Wainaina, J, Ogero, M, Mumelo, L, Wairoto, K, Mbevi, G, Tuti, T, Mwaniki, P, Irimu, G, English, M, Aluvaala, J and The Clinical Information Network Author Group (2023). Replication Data for: Hypothermia amongst neonatal admissions in Kenya: A Retrospective Cohort Study Assessing Prevalence, Trends, Risk Factors, and its Relationship with All-Cause Neonatal Mortality. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/VDSUDE

Mclean, E (2023). Family network and household composition: a longitudinal dataset derived from the Karonga HDSS, in rural Malawi (author-written code). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10037084

Perski, O and Simons, D (2023). Dataset and code underpinning "Classification of lapses in smokers attempting to stop: A supervised machine learning approach using data from a popular smartphone application.". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.8423920

Qian, GY (2023). GeorgeYQian/Marburg_Branching_Process_Model. [Data Collection]. GitHub. https://github.com/GeorgeYQian/Marburg_Branching_Process_Model

Garcia, KKS, Soremekun, S, Bottomley, C, Abrahão, AA, de Miranda, CB, Drakeley, C, Ramalho, WM and Siqueira, AM (2023). Additional file 2 of Assessing the impact of the “malaria supporters project” intervention to malaria control in the Brazilian Amazon: an interrupted time-series analysis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.24151173.v1

Gomes, MC, Brokatzky, D, Bielecka, MK, Wardle, FC and Mostowy, S (2023). Shigella induces epigenetic reprogramming of zebrafish neutrophils. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE217063

Springmann, M, Kennard, H, Dalin, C and Freund, F (2023). Supplementary data file to "International food trade contributes to dietary risks and mortality at global, regional, and national levels". [Data Collection]. University of Oxford. https://doi.org/10.25446/oxford.24085362.v1

Tang, FF, Kosana, P, Jit, M, Terris-Prestholt, F, Wu, D, Ong, JJ and Tucker, JD (2023). PIF influenza costing analysis and probabilistic sensitivity analysis. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001590.s004

Durán, CE, Messina, D, Gini, R, Riefolo, F, Aragón, M, Belitser, S, Bissacco, CA, Bots, SH, de Burgos, A, Carreras-Martínez, JJ, Correcher-Martínez, E, Douglas, IJ, Garcia-Poza, P, Girardi, A, Herings, R, Hoxhaj, V, Huerta, C, Hyeraci, G, Ientile, V, Ingrasciotta, Y, Limoncella, G, Lupattelli, A, Maglanoc, L, Martin, I, Martin, M, Mira-Iglesias, A, Mohammadi, S, Molero, E, Nordeng, H, Oberski, D, Overbeek, J, Pallejà, M, Riera-Arnau, J, Santacà, K, Siiskonen, S, Souverein, P, Schultze, A, Swart, K, Trifirò, G, Urchueguía, A, Villalobos, F, Weibel, D, Zhao, J, Klungel, O and Sturkenboom, M (2023). Rapid Safety Assessment of SARS-CoV-2 Vaccines in EU Member States using Electronic Health Care Data Sources (COVID Vaccine Monitor-CVM study): Final Study Report for WP3 (electronic health record data). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10093613

Etyang, AO, Kapesa, S, Odipo, E, Bauni, E, Kyobutungi, C, Abdalla, M, Mutner, P, Musani, SK, Macharia, A, Williams, TN, Cruickshank, JK, Smeeth, L and Scott, JAG (2023). Replication Data for: Effect of Previous Exposure to Malaria on Blood Pressure in Kilifi, Kenya: A Mendelian Randomization Study. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NCFR6X

Picbougoum, TB, Somda, MS, Zango, SH, Lohmann, J, De Allegri, M, Saidou, H, Hien, H, Meda, N and Robert, A (2023). Study database from the baseline survey of the impact evaluation of the PBF program in Burkina Faso. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001248.s001

Perera, V, Allen, LN, Farrand, C, Kwong, EJL, Liyanage, I and Wickramasinghe, K (2023). Evaluating the role of salt intake in achieving WHO NCD targets in the Eurasian Economic Union: A PRIME modeling study. S1 File. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0289112.s012

Santana-Penin, U, Lopez-Cedrun, J, Santana-Mora, U, Mora, MJ, Lorenzo-Franco, F, Varela-Centelles, P, López-Solache, A, Collier, T and Pocock, SJ (2023). Remodeling dental anatomy vs sham therapy for chronic temporomandibular disorders: A placebo-controlled randomized clinical trial. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.zkh189370

Abouyannis, M, Boga, M, Amadi, D, Ouma, N, Nyaguara, A, Mturi, N, Berkley, JA, Adetifa, IMO, Casewell, NR, Lalloo, DG and Hamaluba, M (2023). The de-identified final dataset for the study population. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010987.s002

Khan, D (2023). Kit comparison data. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.23269328.v3

Kim, ES, Adriko, M, Aidah, W, Oseku, KC, Lokure, D, Sabapathy, K and Webb, EL (2023). The impact of dual- versus single-dosing and fatty food co-administration on albendazole efficacy against hookworm among children in Mayuge district, Uganda: Results from a 2x2 factorial randomised controlled trial. S1 Data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011439.s006

Ramaprasad, A, Burda, P, Koussis, K, Thomas, JA, Pietsch, E, Calvani, E, Howell, SA, MacRae, JI, Snijders, AP, Gilberger, T and Blackman, MJ (2023). Label-free quantitation of proteins detected in SUB1-null schizonts in the presence or absence of C2. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1011449.s007

Ramaprasad, A, Burda, P, Koussis, K, Thomas, JA, Pietsch, E, Calvani, E, Howell, SA, MacRae, JI, Snijders, AP, Gilberger, T and Blackman, MJ (2023). Raw peak intensities of various lipid species measured in LCAT:2loxPint egress-stalled schizonts following mock-or RAP-treatment at ring stages. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1011449.s008

Ramaprasad, A, Burda, P, Koussis, K, Thomas, J, Pietsch, E, Calvani, E, Howell, SA, MacRae, JI, Snijders, AP, Gilberger, T and Blackman, MJ (2023). Sequences of oligonucleotides and other synthetic DNA used in this study. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1011449.s006

Gibbs, H (2023). hamishgibbs/ghana_cdr_aggregation. [Data Collection]. Github. https://github.com/hamishgibbs/ghana_cdr_aggregation

Hyslop, C, Lutz, N, Tam, C, Thu, N, Main, L, Abdelaziz, S, Acikalin, D, Adams, B, Ahn, DE, Apenuwa, O, Barnes, A, Beever, A, Bill, C, Booth, A, Borthakur, B, Boyer, S, Boyes, K, Brown, S, Cairns, G, Candler, A, Collett, M, Collin, A, Coulthard, C, Dantas, L, Dariye, E, Dunn, A, Efthimiou, A, El Kilany, M, Fan, N, Fowks, L, Galang, JB, Glanz, B, Gonzales, J, Hard Af Segerstad-Smith, M, Harris, A, Hooseria, S, Hu, A, Hylton, A, James, M, Janiurek, A, Jones, O, Kamenkovich,, N, Katalan Nasi, A, Kennelly, R, Kline, K, Konle, J, Kunde, H, Laughton, I, Layton, E, Le, A, Lee, S, Linehan-Hill, H, Maddinson, C, Monikowska, L, Murrell, C, Muza, M, Needham-Hewavisenti, E, Newton, A, O'Keeffe, F, Palacio Sasse, L, Pang, SA, Parker, R, Perry, J, Prince, N, Ray, S, Reid, P, Robertson, M, Sakari, RR, Sarro, C, Seo, H, Shen, R, Shen, Q, Sherif, S, Shrestha, K, Spacey Martin, R, Speake, E, Sun, A, Taylor, H, Teginbayev, D, Troiano, M, Trung, I, Usman, I, Von Alten-Reuss, G, Wallock, W, Wang, H, Ward, J, Xia, M, Zionts, J and Zhukova, A (2023). Net Zero Stocktake 2023. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.8021260

White, J, Hawkins, J, Murphy, S, Towson, J, Cannings-John, R, Madden, K, Rona, C, Hickman, M, Moore, L, Bonell, C, Parrott, S, Zammit, S and Hines, L (2023). The FRANK friends study: Data. [Data Collection]. Cardiff University, Cardiff, Wales. https://doi.org/10.17035/d.2023.0244798057

Bolt, H (2023). ehr-lshtm/acute_kidney_injury_seasonality_ML. [Data Collection]. GitHub. https://github.com/ehr-lshtm/acute_kidney_injury_seasonality_ML

Kim, C, Abbas, KM and vaccine-impact (2023). vaccine-impact/vaccine_amr. [Data Collection]. Github. https://github.com/vaccine-impact/vaccine_amr

Bosse, NI, Abbott, S, Bracher, J, Van leeuwen, E, Cori, A and Funk, S (2023). Data for "Human judgement forecasting of COVID-19 in the UK" by Bosse et. al (2023). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7897288

Leung, WTM, Rudge, JW and Fournié, G (2023). Supplementary material from "Simulating contact networks for livestock disease epidemiology: a systematic review". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.6631153.v1

Tashiro, M, Sato, S and Endo, A (2023). Decreased community-acquired pneumonia coincided with rising awareness of precautions before governmental containment policy in Japan. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7891634

Khan, B, Hameed, W and Iqbal Avan, B (2023). Training of maternity service providers on supportive and dignified maternity care: pre-post training assessment. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.h44j0zpq5

Sharma waddington, H, Masset, E, Bick, S and Cairncross, S (2023). Data for: "Impact on childhood mortality of interventions to improve drinking water, sanitation, and hygiene (WASH) to households: Systematic review and meta-analysis". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003398.

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). BLAST results: S. stercoralis orthologues of the S. ratti E/S proteome. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s003

García, GA, Janko, M, Hergott, DEB, Donfack, OT, Smith, JM, Mba Eyono, JN, DeBoer, KR, Nguema Avue, RM, Phiri, WP, Aldrich, EM, Schwabe, C, Stabler, TC, Rivas, MR, Cameron, E, Guerra, CA, Cook, J, Kleinschmidt, I and Bradley, J (2023). Additional file 1 of Identifying individual, household and environmental risk factors for malaria infection on Bioko Island to inform interventions. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.22610438.v1

Spadar, A, Perdigão, J, Campino, S and Clark, TG (2023). Additional file 2 of Large-scale genomic analysis of global Klebsiella pneumoniae plasmids reveals multiple simultaneous clusters of carbapenem-resistant hypervirulent strains. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.22611932.v1

Otiende, M, Nyaguara, A, Bottomley, C, Walumbe, D, Mochamah, G, Amadi, D, Nyundo, C, Kagucia, E, Etyang, A, Adetifa, I, Brand, S, Maitha, E, Chondo, E, Nzomo, E, Aman, R, Mwangangi, M, Amoth, P, Kasera, K, Ng'ang'a, W, Barasa, E, Tsofa, B, Mwangangi, J, Bejon, P, Agweyu, A, Williams, TN and Scott, JAG (2023). Replication Data for: Impact of COVID-19 on mortality in coastal Kenya: a longitudinal open cohort study. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/HAGRAK

Richards, AS (2023). alexandrasrichards/natural_history_tb_disease. [Data Collection]. GitHub. https://github.com/alexandrasrichards/natural_history_tb_disease

Pry, J, Simbeza, S, Geng, E, Mutale, J, Sikombe, K, Jere, L, Bukankala, C and Beres, L (2023). Depression among healthcare workers in Lusaka, Zambia during the COVID-19 pandemic. [Data Collection]. Dryad. https://doi.org/10.25338/B8S646

Monod, M, Brizzi, A, Galiwango, R, Ssekubugu, R, Chen, Y, Xi, X, Kankaka, EN, Ssempijja, V, Abeler-Dörner, L, Akullian, A, Pereira Blenkinsop, A, Bonsall, D, Chang, L, Dan, S, Fraser, C, Golubchik, T, Gray, R, Jackson, J, Kigozi, G, Laeyendecker, O, Mills, L, Quinn, T, Reynolds, SJ, Santelli, J, Sewankambo, N, Spencer, S, Ssekasanvu, J, Waver, M, Serwadda, D, Godfrey-Faussett, P, Kagaayi, J, Grabowski, MK, Ratmann, O, Rakai Health Sciences Program and PANGEA-HIV consortium (2023). Phylogenetic and epidemiologic data relating to age-specific HIV incidence and transmission in Rakai, Uganda, 2003-2018. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7741616

Monod, M, Brizzi, A, Ratmann, O, Dan, S, Xi, X, Galiwango, R, Ssekubugu, R, Chen, Y, Kankaka, EN, Ssempijja, V, Abeler-Dörner, L, Akullian, A, Blenkinsop, AP, Bonsall, D, Chang, L, Fraser, C, Golubchik, T, Gray, R, Jackson, J, Laeyendecker, O, Mills, L, Quinn, T, Santelli, J, Sewankambo, N, Spencer, S, Ssekasanvu, J, Waver, M, Serwadda, D, Godfrey-Faussett, P, Kagaayi, J and Grabowski, MK (2023). Phylogenetic and epidemiologic data relating to age-specific HIV incidence and transmission in Rakai, Uganda, 2003-2018. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7741616

Masselot, P and Gasparrini, A (2023). Temperature-related mortality exposure-response functions for 854 cities in Europe. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7672107

Raghavan, M, Kalantar, K, Duarte, E, Teyssier, N, Takahashi, S, Kung, A, Rajan, JU, Rek, J, Tetteh, KKA, Drakeley, C, Ssewanyana, I, Rodriguez-Barraquer, I, Greenhouse, B and DeRisi, J (2023). Proteome-wide antigenic profiling in Ugandan cohorts identifies associations between age, exposure intensity, and responses to repeat-containing antigens in Plasmodium falciparum. [Data Collection]. Dryad. https://doi.org/10.7272/Q69S1P9G

Daynes, E, Baldwin, M, Greening, NJ, Yates, T, Bishop, NC, Mills, G, Roberts, M, Hamrouni, M, Plekhanova, T, Vogiatzis, I, Echevarria, C, Nathu, R, McAuley, HJC, Latimer, L, Glennie, J, Chambers, F, Penfold, R, Hume, E, Megaritis, D, Alexiou, C, Potthoff, S, Hogg, MJ, Haighton, C, Nichol, B, Leavy, OC, Richardson, M, Elneima, O, Singapuri, A, Sereno, M, Saunders, RM, Harris, VC, Nolan, CM, Bolton, C, Houchen-Wolloff, L, Harrison, EM, Lone, N, Quint, J, Chalmers, JD, Ho, L, Horsley, A, Marks, M, Poinasamy, K, Ramen, B, Wain, LV, Brightling, C, Man, WD, Evans, R and Singh, SJ (2023). Supplementary information files for The effect of COVID rehabilitation for ongoing symptoms post hospitalisation with COVID-19 (PHOSP-R): protocol for a randomised parallel group controlled trial on behalf of the PHOSP consortium. [Data Collection]. Loughborough University. https://doi.org/10.17028/rd.lboro.22189279.v1

Phelan, J and Manko, E (2023). jodyphelan/malaria-db. [Data Collection]. GitHub. https://github.com/jodyphelan/malaria-db

Pietersen, E, Anderson, K, Cox, H, Dheda, K, Bian, A, Shepherd, BE, Sterling, TR, Warren, RM and van der Heijden, YF (2023). Data for: "Variation in missed doses and reasons for discontinuation of anti-tuberculosis drugs during hospital treatment for drug-resistant tuberculosis in South Africa". [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0281097.s001

Chatterjee, S, Das, P, Shikhule, A, Munje, R and Vassall, A (2023). Journey of the tuberculosis patients in India from onset of symptom till one-year post-treatment. Complete dataset. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001564.s009

Koltai, M (2023). mbkoltai/RSV-CEA-Kenya-South-Africa. [Data Collection]. Github. https://github.com/mbkoltai/RSV-CEA-Kenya-South-Africa

Riffe, T and Aburto, JM (2023). A global assessment of the impact of violence on lifetime uncertainty. [Data Collection]. OSF. https://osf.io/degjy

Adeyemi, OO, Ndodo, ND, Sulaiman, MK, Ayansola, OT, Buhari, OIN, Akanbi, OA, Bolarinwa, OA, Chukwu, C, Joel, IY, Omoare, AA, Wahab, KW, Obiekea, C, Buhari, MO, Ahumibe, A, Kolawole, CF, Okoi, C, Omotesho, OB, Mba, N, Adeniyi, O, Babatunde, O, Akintunde, N, Ayinla, G, Akande, OW, Odunola, RA, Saka, MJ, Musa, OI, Durotoye, IA, Ihekweazu, C, Adetifa, IM and Fadeyi, A (2023). SARS-CoV-2 variants-associated outbreaks of COVID-19 in a tertiary institution, North-Central Nigeria: Implications for epidemic control. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0280756.s003

Procter, SR (2023). mert0248/GBS-vax-econ-model. [Data Collection]. Github. https://github.com/mert0248/GBS-vax-econ-model

Colón-González, FDJ, Gibb, R, Khan, K, Watts, A, Lowe, R and Brady, OJ (2022). Projecting the future incidence and burden of dengue in Southeast Asia. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/85XWQ

Shanaube, K, Gachie, T, Hoddinott, G, Schaap, A, Floyd, S, Mainga, T, Bond, V, Hayes, R, Fidler, S and Ayles, H (2022). Depressive symptoms and HIV risk behaviours among adolescents enrolled in the HPTN071 (PopART) trial in Zambia and South Africa. Aggregate dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278291.s012

Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). Gene ontology (GO) enrichment analysis results for significantly upregulated genes at all time points. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s003

Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). KEGG and gene ontology (GO) enrichment analyses for significantly differentially expressed genes between low and high PET score groups for the terms and pathways identified in the main analyses. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s005

Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). KEGG pathway enrichment analysis results for significantly differentially expressed genes at all time points. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s004

Kane, L (2022). Investigation of Vibrio cholerae pathogenesis using a novel human intestinal model of infection. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/PUBS.04670346

Woodward, A, Fuhr, DC, Barry, AS, Balabanova, D, Sondorp, E, Dieleman, MA, Pratley, P, Schoenberger, SF, Mckee, M, Ilkkursun, Z, Acarturk, C, Burchert, S, Knaevelsrud, C, Brown, FL, Steen, F, Spaaij, J, Morina, N, de Graaff, AM, Sijbrandij, M, Cuijpers, P and Roberts, B (2022). Supplementary materials for "Health system responsiveness to the mental health needs of Syrian refugees: mixed-methods rapid appraisals in eight host countries in Europe and the Middle East ". [Data Collection]. DataverseNL. https://doi.org/10.34894/DOMHPZ

Jarju, S, Senghore, E, Brotherton, H, Saidykhan, A, Jallow, S, Krubally, E, Sinjanka, E, Ndene, MN, Bajo, F, Sanyang, MM, Saidy, B, Bah, A, Mohammed, NI, Forrest, K, Clarke, E, Dalessandro, U, Sesay, AK, Usuf, E, Cerami, C, Roca, A, Kampmann, B and De silva, T (2022). Circulation of respiratory viruses during the COVID-19 pandemic in the Gambia. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/TSF78

Gombe, B, Streatfield, C, Leal, L, Opio, S, Joseph, S, Weber, J, Hare, J, Kaleebu, P and Serwanga, J (2022). Optimization and validation of an ELISA assay for the determination of antibody responses to CN54gp140 and AIDSVAX BE for use in the Phase IIb PrEPVacc vaccine trial. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0275927.s001

Piper, J, Ntozini, R, Prendergast, A, Mwapaura, MT and Chidhanguro, D (2022). Adaptation of the Kaufman Assessment Battery for Children—2nd edition (KABC-II) to assess school-age neurodevelopment in rural Zimbabwe. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/T6GXB

Gallandat, K (2022). Water Supply Service Index. [Data Collection]. OSF. https://osf.io/76sev/

Makori, TO, Bargul, JL, Lambisia, AW, Mwanga, MJ, Murunga, N, Laurent, ZRd, Lewa, CS, Mutunga, M, Phan, M, Cotten, M, Nokes, DJ and Agoti, CN (2022). Replication Data for: Genomic epidemiology of the rotavirus G2P[4] strains in coastal Kenya pre- and post-rotavirus introduction, 2012-2018. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/P4MRVF

Soremekun, O, Slob, EAW, Burgess, S, Boua, PR, Fatumo, S and Gill, D (2022). Genetically predicted lipid traits, diabetes mellitus liability and carotid intima-media thickness in African ancestry individuals: a Mendelian randomization study. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7229644

Benest, J (2022). ISIDLSHTM/CoBeDOA_Data. [Data Collection]. GitHub. https://github.com/ISIDLSHTM/CoBeDOA_Data

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Beiras, CG, Marks, M, Quintó, L, Gavilán, S, Kolmau, R, Ubals, M, Vall-Mayans, M and Mitjà, O (2022). Dataset of active ulcer cases included in the analysis. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010197.s001

Martin, JL, Messenger, LA, Mosha, FW, Lukole, E, Mosha, JF, Kulkarni, M, Churcher, TS, Sherrard-Smith, E, Manjurano, A, Protopopoff, N and Rowland, M (2022). Supporting files for: "Durability of three types of dual active ingredient long-lasting insecticidal net compared to a pyrethroid-only LLIN in Tanzania: methodology for a prospective cohort study nested in a cluster randomized controlled trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002833.

Ruiz Cuenca, P, Key, S, Lindblade, KA, Vythilingam, I, Drakeley, C and Fornace, K (2022). Additional file 3 of Is there evidence of sustained human-mosquito-human transmission of the zoonotic malaria Plasmodium knowlesi? A systematic literature review. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19380996.v1

Ruiz Cuenca, P, Key, S, Lindblade, KA, Vythilingam, I, Drakeley, C and Fornace, K (2022). Is there evidence of sustained human-mosquito-human transmission of the zoonotic malaria Plasmodium knowlesi? A systematic literature review. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.5902668.v1

Smith, A, Wall, RJ, Patterson, S, Rowan, T, Rico Vidal, E, Stojanovski, L, Huggett, M, Hampton, SE, Thomas, MG, Corpas Lopez, V, Gillingwater, K, Duke, J, Napier, G, Peter, R, Vitouley, HS, Harrison, JR, Milne, R, Jeacock, L, Baker, N, Davis, SH, Simeons, F, Riley, J, Horn, D, Brun, R, Zuccotto, F, Witty, MJ, Wyllie, S, Read, KD and Gilbert, IH (2022). Repositioning of a Diaminothiazole Series Confirmed to Target the Cyclin-Dependent Kinase CRK12 for Use in the Treatment of African Animal Trypanosomiasis. [Data Collection]. ACS Publications. https://doi.org/10.1021/acs.jmedchem.1c02104.s003

Finch, E and Kucharski, AJ (2022). EmilieFinch/covid-reinfection. [Data Collection]. Github. https://github.com/EmilieFinch/covid-reinfection

Gimma, A, Munday, JD, Wong, KLM, Coletti, P, Van Zandvoort, K, Prem, K, Klepac, P, Rubin, GJ, Funk, S, Edmunds, WJ and Jarvis, CI (2022). Mean contacts by age and date. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1003907.s015

Motuma, A, Regassa, LD, Gobena, T, Teji Roba, K, Berhane, Y and Worku, A (2022). Almost all working adults have at least one risk factor for non-communicable diseases: Survey of working adults in Eastern Ethiopia. S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0264698.s001

Saeed, DK, Shakoor, S, Razzak, SA, Hasan, Z, Sabzwari, SF, Azizullah, Z, Kanji, A, Nasir, A, Shafiq, S, Ghanchi, NK and Hasan, R (2022). Variants associated with Bedaquiline (BDQ) resistance identified in Rv0678 and efflux pump genes in Mycobacterium tuberculosis isolates from BDQ naïve TB patients in Pakistan. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.5861725.v1

Wamae, K, Ndwiga, L, Kharabora, O, Kimenyi, KM, Osoti, V, de Laurent, ZR, Wambua, J, Musyoki, J, Ngetsa, C, Kalume, P, Mwambingu, G, Hamaluba, M, van der Pluijm, RW, Dondorp, AM, Bailey, JA, Juliano, JJ, Bejon, P and Ochola-Oyier, LI (2022). Targeted Amplicon deep sequencing of ama1 and mdr1 to track within-host P. falciparum diversity in Kilifi, KENYA. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.6243928

Stangl, AL, Pliakas, T, Izazola-Licea, JA, Ayala, G, Beattie, TS, Ferguson, L, Orza, L, Mathur, S, Pulerwitz, J, Iovita, A and Bendaud, V (2022). S1 Data - Removing the societal and legal impediments to the HIV response: An evidence-based framework for 2025 and beyond. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0264249.s008

Eccleston, RC, Manko, E, Campino, S, Clark, TG and Furnham, N (2022). A computational method for predicting the most likely evolutionary trajectories in the stepwise accumulation of resistance mutations. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.6122329

Govender, I (2022). Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care:a whole systems approach. [Data Collection]. AHRI Data Repository. https://doi.org/10.23664/AHRI.UmoyaOmuhle.Datasets

Rojas de Arias, A, Messenger, LA, Rolon, M, Vega, MC, Acosta, N, Villalba, C and Marcet, PL (2022). Cytochrome B sequences used for phylogenetic network analysis. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0263465.s002

Williams, J (2022). jackrdwilliams/CRASH-Mild-Model. [Data Collection]. Github. https://github.com/jackrdwilliams/CRASH-Mild-Model

Gitonga, CW, Noor, AM, Brooker, SJ and Snow, RW (2022). Nationwide school health surveys 2009-2010 in Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/UQLTO5

Pung, R (2022). rachaelpung/cruise_networks. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.6009026

Mulick, A (2022). amulick/MCEE-u5mort2019. [Data Collection]. Github. https://github.com/amulick/MCEE-u5mort2019

Dadari, I and Usuf, E (2022). Medicines wastage data. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0000181.s001

Malawi Epidemiology and Intervention research Unit and London School of Hygiene and Tropical Medicine (2022). ALPHA HIV Incidence and Mortality Data 2002-2017, Karonga, Malawi. [Data Collection]. DataFirst, Cape Town, South Africa. https://doi.org/10.25828/wcty-q497

Wick, RR and Holt, KE (2022). Assembly and polishing details for the real-read tests. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1009802.s020

Wick, RR and Holt, KE (2022). Confusion matrices for the simulated-read tests. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1009802.s017

Wick, RR and Holt, KE (2022). Predictors of assembly quality. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1009802.s018

Simões, ML, Dong, Y, Mlambo, G and Dimopoulos, G (2022). C-type lectin 4 regulates broad-spectrum melanization-based refractoriness to malaria parasites. The underlying data for all graphs. [Data Collection]. PLOS Biology. https://doi.org/10.1371/journal.pbio.3001515.s012

Pickering, H, Hart, JD, Burr, S, Stabler, R, Maleta, K, Kalua, K, Bailey, RL and Holland, MJ (2022). Additional file 1 of Impact of azithromycin mass drug administration on the antibiotic-resistant gut microbiome in children: a randomized, controlled trial. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17982643.v1

Gibson, AJ, Passmore, IJ, Faulkner, V, Xia, D, Nobeli, I, Stiens, J, Willcocks, S, Clark, TG, Sobkowiak, B, Werling, D, Villarreal-Ramos, B, Wren, BW and Kendall, SL (2021). Table_1_Probing Differences in Gene Essentiality Between the Human and Animal Adapted Lineages of the Mycobacterium tuberculosis Complex Using TnSeq.XLSX. [Data Collection]. Frontiers. https://doi.org/10.3389/fvets.2021.760717.s002

Abbott, S, Sherratt, K and Funk, S (2021). Real-time estimation of the time-varying transmission advantage of Omicron in England using S-Gene Target Status as a Proxy. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5799135

Rubio, FJ, Alvares, D, Redondo-Sanchez, D and Luque-fernandez, MA (2021). migariane/BayesVarImpComorbiCancer. [Data Collection]. Github. https://github.com/migariane/BayesVarImpComorbiCancer

Udosen, B, Soremekun, O, Ekenna, C, Idowu Omotuyi, O, Chikowore, T, Nashiru, O and Fatumo, S (2021). Additional file 1 of In-silico analysis reveals druggable single nucleotide polymorphisms in angiotensin 1 converting enzyme involved in the onset of blood pressure. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17305518.v1

Rasoanaivo, TF, Bourner, J, Randriamparany, RN, Gamana, TM, Andrianaivoarimanana, V, Raherivelo, MH, Randriamampionona, H, Rajerison, M, Raberahona, M, Salam, AP, Edwards, T, Olliaro, PL and Randremanana, RV (2021). Data for: "The impact of COVID-19 on clinical research for Neglected Tropical Diseases (NTDs): A case study of bubonic plague". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010064.s001

Harris, RC, Quaife, M, Weerasuriya, CK, Gomez, GB, Sumner, T, Bozzani, F and White, RG (2021). lshtm-tbmg/natcomms-m72sa: Nat Comms - code. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5793302

Grant-McAuley, W, Klock, E, Laeyendecker, O, Piwowar-Manning, E, Wilson, E, Clarke, W, Breaud, A, Moore, A, Ayles, H, Kosloff, B, Shanaube, K, Bock, P, Mandla, N, van Deventer, A, Fidler, S, Donnell, D, Hayes, R and Eshleman, SH (2021). Evaluation of multi-assay algorithms for identifying individuals with recent HIV infection: HPTN 071 (PopART). Minimum dataset, seroconverters. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0258644.s004

Walls, H (2021). MalawiFoodSystems_Discrete_choice_experiment. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/YKVPR8

Walls, H (2021). MalawiFoodSystems_Food_market_survey. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NSAK0H

Chapman, LAC, Barnard, RC, Russell, TW, Abbott, S, Van Zandvoort, K, Davies, NG and Kucharski, AJ (2021). Unexposed populations and potential COVID-19 burden in European countries as of 21st November 2021. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5772162

Malla, L, Langat, R and Akech, S (2021). CIN paediatric admissions. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/C0CDP9

Lindsey, BB, Villabona-Arenas, CJ, Atkins, KE and Campbell, F (2021). Chjulian/sheffield_HT: Characterising within-hospital SARS-CoV-2 transmission events. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5769865

Holt, KE, Gorrie, C and Wyres, K (2021). Genome assemblies and pan-genome data for 328 clinical isolates of Klebsiella pneumoniae species complex, representing one year of infections diagnosed in a hospital diagnostic lab. [Data Collection]. Monash University. https://doi.org/10.26180/16811344

Nyaguthii, DM, Otieno, GP, Kombe, IK, Koech, D, Mutunga, M, Medley, GF, Nokes, DJ and Munywoki, PK (2021). Replication Data for: Infection patterns of endemic human coronaviruses in rural households in coastal Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/CPJ9B4

Quinn, AK, Williams, KN, Thompson, LM, Harvey, SA, Piedrahita, R, Wang, J, Quinn, C, Pillarisetti, A, McCracken, JP, Rosenthal, JP, Kirby, MA, Diaz Artiga, A, Thangavel, G, Rosa, G, Miranda, JJ, Checkley, W, Peel, JL and Clasen, TF (2021). Replication Data for: Fidelity and Adherence to a Liquefied Petroleum Gas Stove and Fuel Intervention during Gestation: The Multi-Country Household Air Pollution Intervention Network (HAPIN) Randomized Controlled Trial. [Data Collection]. UNC Dataverse. https://doi.org/10.15139/S3/9DDEAW

Soremekun, O, Soremekun, C, Machipisa, T, Soliman, M, Nashiru, O, Chikowore, T and Fatumo, S (2021). Genome-Wide Association and Mendelian Randomization Analysis Reveal the Causal Relationship Between White Blood Cell Subtypes and Asthma in Africans. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.3389/fgene.2021.749415.s001

Smith, KG, Scheelbeek, P, Balmford, A and Garnett, EE (2021). Research data supporting "Discrepancies between two long-term dietary datasets in the United Kingdom (UK)". [Data Collection]. University of Cambridge, Cambridge, United Kingdom. https://doi.org/10.17863/CAM.78207

Evans, B and Jombart, T (2021). Analysis of changes in worldwide routine immunisation coverage in 2020. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5746754

Springmann, M and Freund, F (2021). Supplementary data to "Options for reforming agricultural subsidies from health, climate, and economic perspectives". [Data Collection]. Oxford University Research Archive, Oxford, United Kingdom. https://doi.org/10.5287/bodleian:QmzkJxaYZ

Abotsi, RE, Nicol, MP, McHugh, G, Simms, V, Rehman, AM, Barthus, C, Ngwira, LG, Kwambana-Adams, B, Heyderman, RS, Odland, JØ, Ferrand, RA and Dube, FS (2021). Data from: The impact of long-term azithromycin on antibiotic resistance in HIV-associated chronic lung disease. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.5dv41ns71

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for South Africa Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/17XS9I

Zhu, J, Zhao, H, Chen, D, Tse, LA, Kinra, S and Li, Y (2021). DataSheet_1_Genetic Correlation and Bidirectional Causal Association Between Type 2 Diabetes and Pulmonary Function.xlsx. [Data Collection]. Frontiers. https://doi.org/10.3389/fendo.2021.777487.s001

Fischer, N, Darmstadt, GL, Shahunja, K, Crowther, JM, Kendall, L, Gibson, RA, Ahmed, T and Relman, DA (2021). Dataset and R code for article "Topical emollient therapy with sunflower seed oil alters the skin microbiota of young children with severe acute malnutrition in Bangladesh: a randomised, controlled study". [Data Collection]. Stanford Digital Repository. https://purl.stanford.edu/dk954yp6586

Gibb, R and Mollentze, N (2021). rorygibb/pathogen_discovery: Viral discovery Biology Letters code. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5714490

Cunha, MG, Silva, ES, Sepúlveda, N, Costa, SPT, Saboia, TC, Guerreiro, JF, Póvoa, MM, Corran, PH, Riley, E and Drakeley, CJ (2021). Serologically Defined Variations in Malaria Endemicity in Pará State, Brazil. Supplementary dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0260513.s001

Lee, SA, Economou, T, de Castro Catão, R, Barcellos, C and Lowe, R (2021). Data and R code to accompany 'The impact of climate suitability, urbanisation, and connectivity on the expansion of dengue in 21st century Brazil' (version 1.0.0). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5710715

Rosello, A, Abbott, S and Barnard, RC (2021). rmjlros/COVID19_care_home_NPIs. [Data Collection]. Github. https://github.com/rmjlros/COVID19_care_home_NPIs

Shulman, CE, Dorman, EK, Cutts, F, Kawuondo, K, Bulmer, JN, Peshu, N and Marsh, K (2021). Replication Data for: Malaria in pregnancy: adverse effects on haemoglobin levels and birthweight in primigravidae and multigravidae. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/HP1JYJ

Caruso, B, Sclar, GD, Routray, P, Nagel, CL, Majorin, F, Sola, S, Koehne, W and Clasen, TF (2021). Low-Cost Behaviour Change Interventions to Improve Latrine Use and Safe Child Faeces Disposal in Rural Odisha, India. [Data Collection]. OSF. https://osf.io/bewpz/

Amoah, J, Said, S, Rampal, L, Manaf, R, Ibrahim, N, Owusu-Agyei, S and Poku Asante, K (2021). Effects of a school-based intervention to reduce cardiovascular disease risk factors among secondary school students: A cluster-randomized, controlled trial. Working dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0259581.s003

Damilola R. Oresegun, Peter Thorpe, Benavente, E, Campino, S, Fauzi Muh, Moon, RW, Clark, T and Cox-Singh, J (2021). Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5598263

Stubbs, T, Kentikelenis, A, Stuckler, D, Mckee, M and King, L (2021). Replication Data for: "The impact of IMF conditionality on government health expenditure: A cross-national analysis of 16 West African nations". [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/BCMAV5

Barasa, E, Musiega, A, Hanson, K, Nyawira, L, Mulwa, A, Molyneux, S, Maina, I, Tsofa, B, Normand, C and Jemutai, J (2021). Additional file 1 of Level and determinants of county health system technical efficiency in Kenya: two stage data envelopment analysis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17132986.v1

Borghi, J, Binyaruka, P, Mayumana, I, Lange, S, Somville, V and Maestad, O (2021). Long term effects of payment for performance on maternal and child health outcomes– evidence from Tanzania. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5636645

Mowbray, CE, Braillard, S, Glossop, PA, Whitlock, GA, Jacobs, RT, Speake, J, Pandi, B, Nare, B, Maes, L, Yardley, V, Freund, Y, Wall, RJ, Carvalho, S, Bello, D, Van den Kerkhof, M, Caljon, G, Gilbert, IH, Corpas-Lopez, V, Lukac, I, Patterson, S, Zuccotto, F and Wyllie, S (2021). DNDI-6148: A Novel Benzoxaborole Preclinical Candidate for the Treatment of Visceral Leishmaniasis. [Data Collection]. ACS Publications, Washington, DC, USA. https://doi.org/10.1021/acs.jmedchem.1c01437.s004

Pray, IW, Pizzitutti, F, Bonnet, G, Gonzales-Gustavson, E, Wakeland, W, Pan, WK, Lambert, WE, Gonzalez, AE, Garcia, HH and O’Neal, SE (2021). Data file including CystiAgent simulation results, observed results from the Ring Strategy Trial, and all intervention settings for each village evaluated (n = 21 villages). [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009885.s002

Endo, A, Uchida, M, Hayashi, N, Liu, Y, Atkins, KE, Kucharski, AJ and Funk, S (2021). akira-endo/schooldynamics_FluMatsumoto14-15: Within and between classroom transmission patterns of seasonal influenza among primary school students in Matsumoto city, Japan. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5604502

Isac, S, Javalkar, P, Platt, L, Watts, C and Heise, L (2021). Samvedana Plus: Reducing Violence and Increasing Condom Use in the Intimate Partnerships of female Sex Workers in Bagalkote District, North Karnataka, South India. [Data Collection]. MEDAT Data Repository. https://medat.samrc.ac.za/index.php/catalog/37/

Wu, JT, Mei, S, Luo, S, Leung, K, Liu, D, Lv, Q, Liu, J, Li, Y, Prem, K, Jit, M, Weng, J, Feng, T, Zheng, X and Leung, GM (2021). Table S4 from A global assessment of the impact of school closure in reducing COVID-19 spread. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16851696.v1

Murphy, N, Cardinal, MV, Bhattacharyya, T, Enriquez, GF, Macchiaverna, NP, Alvedro, A, Freilij, H, Martinez de Salazar, P, Molina, I, Mertens, P, Gilleman, Q, Gürtler, RE and Miles, MA (2021). Additional file 5 of Assessing antibody decline after chemotherapy of early chronic Chagas disease patients. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16841066.v1

Mee, P, Alexander, N and Colón-González, FJ (2021). Paul-Mee/clic_brazil. [Data Collection]. Github. https://github.com/Paul-Mee/clic_brazil

Galofré-Vilà, G, Meissner, CM, Mckee, M and Stuckler, D (2021). Austerity and the rise of the nazi party. [Data Collection]. Inter-university Consortium for Political and Social Research. https://doi.org/10.3886/E125101V1

Witkowska McConnell, W, Davis, C, Sabir, SR, Garrett, A, Bradley-Stewart, A, Jajesniak, P, Reboud, J, Xu, G, Yang, Z, Gunson, R, Thomson, EC and Cooper, J (2021). Loop mediated isothermal amplification as a powerful tool for early diagnosis of hepatitis C virus. [Data Collection]. University of Glasgow. https://doi.org/10.5525/gla.researchdata.1127

Bauduin, S, Chubaty, A, McIntire, E, Kohli, M and Gruson, H (2021). PredictiveEcology/NetLogoR. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3695051

Orindi, BO, Ziraba, A, Bruyneel, L, Floyd, S and Lesaffre, E (2021). Invariance of the WHO violence against women instrument among Kenyan adolescent girls and young women: Bayesian psychometric modeling. S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0258651.s007

Yasuda, I, Saito, N, Suzuki, M, Umipig, DV, Solante, RM, Guzman, FD, Sayo, AR, Yasunami, M, Koizumi, N, Kitashoji, E, Sakashita, K, Ng, CFS, Smith, C and Ariyoshi, K (2021). Unique characteristics of new complete blood count parameters, the Immature Platelet Fraction and the Immature Platelet Fraction Count, in dengue patients. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16810771.v1

Chen-hussey, V (2021). Response of Hyalomma marginatum to 20% DEET. [Data Collection]. Mendeley Data. https://doi.org/10.17632/gg5f674w7m.1

Clements, AJ and Fadai, NT (2021). nfadai/Clements2021. [Data Collection]. GitHub. https://github.com/nfadai/Clements2021

Springmann, M (2021). Supplementary data to "The global and regional costs of healthy and sustainable dietary patterns: a modelling study". [Data Collection]. University of Oxford, Oxford, United Kingdom. https://doi.org/10.5287/bodleian:bpPJMRzJo

Phillips, D, Gemechu, T, Parry, E, Yacoub, M and Kotit, S (2021). Community-based prevalence of Rheumatic Heart Disease in rural Ethiopia: five-year follow-up. [Data Collection]. University of Southampton, Southampton, United Kingdom. https://doi.org/10.5258/SOTON/D1987

Fu, H and Abbas, KM (2021). lshtm-vimc/dynamice. [Data Collection]. Github. https://github.com/lshtm-vimc/dynamice

Weckman, AM, Conroy, AL, Madanitsa, M, Gnaneswaran, B, McDonald, CR, Kalilani-Phiri, L, Chandna, J, Ali, D, Mwapasa, V, Khairallah, C, Thwai, KL, Meshnick, SR, Taylor, SM, ter Kuile, FO, Kain, KC and Gladstone, M (2021). Neurocognitive outcomes in Malawian children exposed to malaria during pregnancy: An observational birth cohort study. Anonymized dataset, wide format. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1003701.s001

Liao, J, Kirby, MA, Pillarisetti, A, Piedrahita, R, Balakrishnan, K, Sambandam, S, Mukhopadhyay, K, Ye, W, Rosa, G, Majorin, F, Dusabimana, E, Ndagijimana, F, McCracken, JP, Mollinedo, E, de Leon, O, Díaz-Artiga, A, Thompson, LM, Kearns, KA, Naeher, L, Rosenthal, J, Clark, ML, Steenland, K, Waller, LA, Checkley, W, Peel, JL and Clasen, T (2021). Replication Data for: LPG stove and fuel intervention among pregnant women reduce fine particle air pollution exposures in three countries: Pilot results from the HAPIN trial. [Data Collection]. Harvard Dataverse. https://doi.org/10.15139/S3/XSGXUM

Koltai, M (2021). Source data for "Date of introduction and epidemiologic patterns of SARS-CoV-2 in Mogadishu, Somalia: estimates from transmission modelling of satellite-based excess mortality data in 2020". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5534768

Parker, E (2021). eparker12/RoVI: Analysis code and data for RoVI study primary outcomes. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5528336

Diamond, C, Gong, H, Sun, FY, Liu, Y, Quilty, B, Jit, M, Yang, J, Yu, H, Edmunds, WJ and Baguelin, M (2021). EIDECDIA/China_influenza_seasonality. [Data Collection]. Github. https://github.com/EIDECDIA/China_influenza_seasonality

Checchi, F, Testa, A, Gimma, A, Koum-Besson, E and Warsame, A (2021). francescochecchi/mortality_small_area_estimation. [Data Collection]. Github. https://github.com/francescochecchi/mortality_small_area_estimation

Ku, C, MacPherson, P, Khundi, M, Nzawa Soko, RH, Feasey, HRA, Nliwasa, M, Horton, KC, Corbett, EL and Dodd, PJ (2021). Durations of asymptomatic, symptomatic, and care-seeking phases of tuberculosis disease with a Bayesian analysis of prevalence survey and notification data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002633.

Levecke, B, Coffeng, LE, Hanna, C, Pullan, RL and Gass, KM (2021). The data used to determine the required diagnostic performance, the sample size and the corresponding decision cut-offs. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009740.s004

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Beilinson, HA, Glynn, RA, Yadavalli, AD, Xiao, J, Corbett, EL, Saribasak, H, Arya, R, Miot, C, Bhattacharyya, A, Jones, JM, Pongubala, JM, Bassing, CH and Schatz, DG (2021). The RAG1 N-terminal region regulates the efficiency and pathways of synapsis for V(D)J recombination. [Data Collection]. immunoSEQ Analyze. https://doi.org/10.21417/HAB2021JEM

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Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). Local Estimates of the Covid 19 Reproduction Number (R) for the United Kingdom Based on Deaths. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/UIM3MB

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Canada Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/2CNKZJ

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Sringernyuang, L, Whanpuch, P, Poompruek, P and Chandler, C (2021). Anti-microbials In Society - Thailand, Study 1, 2017-2021. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-855071

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Oliveira, MD, Vieira, AL, Dimitrovová, K, Angelis, A, Kanavos, P and Bana e Costa, C (2021). IMPACT HTA, WP7 (Methodological tools using multi-criteria value methods for HTA decision-making), Task 2 (Multi-criteria evaluation framework), Results of the 1st Web-Delphi process to HTA stakeholders, organized into 6 separate parallel panels. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5256671

Oliveira, MD, Dimitrovová, K, Vieira, AL, Angelis, A, Kanavos, P and Bana e Costa, C (2021). IMPACT HTA, WP7 (Methodological tools using multi-criteria value methods for HTA decision-making), Task 2 (Multi-criteria evaluation framework), Results of the 2nd Web-Delphi process to HTA stakeholders, organized in a single panel. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5256844

Oliveira, MD, Dimitrovová, K, Angelis, A, Kanavos, P and Bana e Costa, C (2021). Results of the Web-Delphi process to YLV stakeholders (three rounds). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5257424

Abbott, S and Funk, S (2021). epiforecasts/covid19.sgene.utla.rt. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5236661

Tennant, WSD, Cardinale, E, Cêtre-Sossah, C, Moutroifi, Y, Le Godais, G, Colombi, D, Spencer, SEF, Tildesley, MJ, Keeling, MJ, Charafouddine, O, Colizza, V, Edmunds, WJ and Métras, R (2021). wtennant/rvf_comoros: Supporting data and code for 'Modelling the persistence and control of Rift Valley fever virus in a spatially heterogeneous landscape'. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5234876

Pung, R (2021). rachaelpung/serial_interval_covid_b.1.617.2. [Data Collection]. Github. https://github.com/rachaelpung/serial_interval_covid_b.1.617.2

Van zandvoort, K, Bobe, MO, Hassan, AI, Abdi, MI, Ahmed, MS, Warsame, MY, Wais, MA, Diggle, E, Satzke, C, Mulholland, K, Egeh, MM, Hassan, MM, Hergeeye, MA, Eggo, RM, Checchi, F and Flasche, S (2021). Social contacts and other risk factors for respiratory infections among internally displaced people in Somaliland. Data and analyses. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5225140

Du, J, Page, AE and Mace, R (2021). Allocare project. [Data Collection]. OSF. https://osf.io/bh9ya/?view_only=6d201b5a998c4de4820db99e014b8967

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Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Impact of the DREAMS interventions on educational attainment among adolescent girls and young women: Causal analysis of a prospective cohort in urban Kenya. Analytical datasets. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0255165.s012

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Number and proportions of AGYW aged 15–22 years retained in the study vs those lost to follow up at endline (2019), by AGYW characteristics. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0255165.s008

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Number of interventions accessed by age group, schooling status at baseline, and invitation to DREAMS. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0255165.s009

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Results from sensitivity analysis for associations between DREAMS and educational attainment. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0255165.s011

De figueiredo, A (2021). Impact of vaccine passports on inclination to accept COVID-19 vaccinations in the UK. [Data Collection]. OSF. https://osf.io/xh9p7/

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Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Slovenia). [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.5137239

Chowdhury, S, Pozzer, A, Haines, A, Klingmüller, K, Münzel, T, Paasonen, P, Sharma, A, Venkataraman, C and Lelieveld, J (2021). Global health burden of ambient PM2.5 and the role of anthropogenic black carbon and organic aerosols. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5131659

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Oxborough, RM, Seyoum, A, Yihdego, Y, Chabi, J, Wat’senga, F, Agossa, FR, Coleman, S, Musa, SL, Faye, O, Okia, M, Bayoh, M, Alyko, E, Rakotoson, J, Masendu, H, Sovi, A, Gadiaga, L, Abong’o, B, Opondo, K, Baber, I, Dabire, R, Gnanguenon, V, Yohannes, G, Varela, K, Fondjo, E, Carlson, J, Armistead, JS and Dengela, D (2021). Additional file 1 of Determination of the discriminating concentration of chlorfenapyr (pyrrole) and Anopheles gambiae sensu lato susceptibility testing in preparation for distribution of Interceptor® G2 insecticide-treated nets. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14984900.v1

Oxborough, RM, Seyoum, A, Yihdego, Y, Chabi, J, Wat’senga, F, Agossa, FR, Coleman, S, Musa, SL, Faye, O, Okia, M, Bayoh, M, Alyko, E, Rakotoson, J, Masendu, H, Sovi, A, Gadiaga, L, Abong’o, B, Opondo, K, Baber, I, Dabire, R, Gnanguenon, V, Yohannes, G, Varela, K, Fondjo, E, Carlson, J, Armistead, JS and Dengela, D (2021). Additional file 2 of Determination of the discriminating concentration of chlorfenapyr (pyrrole) and Anopheles gambiae sensu lato susceptibility testing in preparation for distribution of Interceptor® G2 insecticide-treated nets. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14984906.v1

Oxborough, RM, Seyoum, A, Yihdego, Y, Chabi, J, Wat’senga, F, Agossa, FR, Coleman, S, Musa, SL, Faye, O, Okia, M, Bayoh, M, Alyko, E, Rakotoson, J, Masendu, H, Sovi, A, Gadiaga, L, Abong’o, B, Opondo, K, Baber, I, Dabire, R, Gnanguenon, V, Yohannes, G, Varela, K, Fondjo, E, Carlson, J, Armistead, JS and Dengela, D (2021). Additional file 3 of Determination of the discriminating concentration of chlorfenapyr (pyrrole) and Anopheles gambiae sensu lato susceptibility testing in preparation for distribution of Interceptor® G2 insecticide-treated nets. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14984909.v1

Niles, RA, Thickstun, CR, Cox, H, Dilliott, D, Burgert-Brucker, CR, Harding-Esch, EM, Clementson, N, Sampson, A, Alexandre, JS, Morice Trejos, AC, Scholte, RGC and Krentel, A (2021). Community Survey of Lymphatic Filariasis Mass Drug Administration Acceptability in Guyana, August 2019. [Data Collection]. UNC Dataverse. https://doi.org/10.15139/S3/VIOTDL

Wilkinson, KA, Maokola, WM, Ngowi, BJ, Mahande, MJ, Todd, J, Robert, M and Msuya, SE (2021). Impact of Isoniazid Preventive Therapy on Tuberculosis incidence among people living with HIV: A secondary data analysis using Inverse Probability Weighting of individuals attending HIV care and treatment clinics in Tanzania. S1 Dataset. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0254082.s001

Uyoga, S, Adetifa, IM, Otiende, M, Gitonga, JN, Mugo, D, Nyagwange, J, Karanja, HK, Tuju, J, Makale, J, Aman, R, Mwangangi, M, Amoth, P, Kasera, K, Ng’ang’a, W, Chege, E, Yegon, C, Kithi, K, Odhiambo, E, Rotich, T, Orgut, I, Kihara, S, Bottomley, C, Kagucia, EW, Gallagher, KE, Etyang, A, Voller, S, Lambe, T, Wright, D, Barasa, E, Tsofa, B, Mwangangi, J, Bejon, P, Ochola-Oyier, LI, Warimwe, GM, Agweyu, A and Scott, JAG (2021). Replication Data for: Prevalence of SARS-CoV-2 Antibodies from a one-year National Serosurveillance of Kenyan Blood Transfusion Donors. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/3E1YSQ

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Denmark). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5040530

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (France). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5040870

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Italy). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5041112

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Poland). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5041128

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Portugal). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5041140

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Spain). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5040839

Abbott, S, Hickson, J, Badr, HS, Funk, S, Monticone, P, Ellis, P, Munday, JD, Allen, J, Pearson, CAB, DeWitt, M, Bosse, N and Meakin, S (2021). epiforecasts/EpiNow2. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3957489

Spadar, A, Phelan, J, Diez-Benavente, E, Campos, M, Gomez, LF, Mohareb, F, Clark, TG and Campino, S (2021). Data for: "Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002482.

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Colombia Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/GI8EVP

Lay, C, Chu, CW, Purbojati, RW, Acerbi, E, Drautz-Moses, DI, de Sessions, PF, Jie, S, Ho, E, Kok, YJ, Bi, X, Chen, S, Mak, SY, Chua, MC, Goh, AEN, Chiang, WC, Rao, R, Chaithongwongwatthana, S, Khemapech, N, Chongsrisawat, V, Martin, R, Koh, Y, Lohar, SR, Tan, ICH, Anng, WA, Jie, C, Bartke, N, Ben-Amor, K, Renes, IB, Wong, F, Roeselers, G, Ho, YS, Hibberd, ML, Schuster, SC and Knol, J (2021). Data for: "A synbiotic intervention modulates meta-omics signatures of gut redox potential and acidity in elective caesarean born infants". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Pavanello, F, De Cian, E, Davide, M, Mistry, M, Cruz, TB, Bezerra, PdS, Jagu, D, Renner, S, Schaffer, R and Lucena, AFP (2021). Data for: Air-Conditioning and the Adaptation Cooling Deficit in Emerging Economies, Pavanello et al 2021. [Data Collection]. Mendeley Data. https://doi.org/10.17632/ws7cmwbnfg.1

Fujisawa, K, Silcott-Niles, C, Simonson, P, Lamattina, D, Humeres, CA, Bhattacharyya, T, Mertens, P, Thunissen, C, O’Rourke, V, Pańczuk, M, Whitworth, JA, Salomón, OD and Miles, MA (2021). Consolidated results of dogs in the 2018 and 2019 studies. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009552.s001

Davidson, JA (2021). jenAdavidson/cvrisk_mace_ari. [Data Collection]. Github. https://github.com/jenAdavidson/cvrisk_mace_ari

Dorman, M, Thomson, NR and Campos, J (2021). Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemic Vibrio cholerae infection. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14384225.v1

Oliphant, NP, Ray, N, Bensaid, K, Ouedraogo, A, Gali, AY, Habi, O, Maazou, I, Panciera, R, Muñiz, M, Sy, Z, Manda, S, Jackson, D and Doherty, T (2021). Supplementary Appendix 1c of "Optimising geographical accessibility to primary health care: a geospatial analysis of community health posts and community health workers in Niger". [Data Collection]. Zenodo.

Burke, R (2021). rachaelmburke/hivhospital. [Data Collection]. Github. https://github.com/rachaelmburke/hivhospital

Pollington, TM, Tildesley, MJ, Hollingsworth, TD and Chapman, LAC (2021). t-pollington/developments_tau_statistic. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4906403

Prem, K (2021). kieshaprem/synthetic-contact-matrices. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4889499

Randera-Rees, S, Safari, WC, Gareta, D, Herbst, K, Baisley, K and Grant, AD (2021). Clinic attendance by sex and HIV status in rural South Africa. [Data Collection]. Africa Health Research Institute (AHRI). https://doi.org/10.23664/AHRI.CLINIC.VISITS.CODE.2021

Shaver, J, Shenk, MK, Sear, R, Sosis, R, Spake, L, Schaffnit, S, Lynch, R and Hassan, A (2021). The Evolutionary Dynamics of Religion, Family Size, and Child Success. [Data Collection]. OSF. https://osf.io/b865v

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Austria). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4775972

Auzenbergs, M, Fountain, H, Macklin, G, Lyons, H and O'reilly, KM (2021). mauzenbergs/polio_vdpv. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4769689

Paton, RS, Kamau, A, Akech, S, Agweyu, A, Ogero, M, Mwandawiro, C, Mturi, N, Mohammed, S, Mpimbaza, A, Kariuki, S, Otieno, NA, Nyawanda, BO, Mohamed, AF, Mtove, G, Reyburn, H and Gupta, S (2021). Replication Data for: Malaria infection and severe disease risks in Africa. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/XGDB3K

Spake, L, Schaffnit, S, Sear, R, Shenk, MK, Sosis, R and Shaver, J (2021). Mother's partnership status and allomothering networks in the United Kingdom and United States. [Data Collection]. Open Science Framework. https://osf.io/zpu5f/

McCarthy, M, O'Keeffe, L, Williamson, P, Sydes, M, Farrin, A, Lugg-Widger, F, Davies, G, Avery, K, Chan, A, Kwakkenbos, L, Thombs, B, Watkins, A, Hemkens, LG, Gale, C, Zwarenstein, M, Langan, S, Thabane, L, Juszczak, E, Moher, D and Kearney, P (2021). The development of a SPIRIT extension for trials conducted using cohorts and routinely collected data (SPIRIT-ROUTINE). [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/VQRUW

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). Continent Summary Reproduction Number (R) Based on Reported Cases. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/F9HVNL

Fuehrer, H, Dombrowski, JG, Barateiro, A, Peixoto, EPM, Barros, André Boler Cláudio da Silva, Souza, RMd, Clark, TG, Campino, S, Wrenger, C, Wunderlich, G, Palmisano, G, Epiphanio, S, Gonçalves, LA and Marinho, CRF (2021). Study database for: "Adverse pregnancy outcomes are associated with Plasmodium vivax malaria in a prospective cohort of women from the Brazilian Amazon". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009390.s009

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Belgium Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NALGQJ

Lovell-Read, FA, Funk, S, Obolski, U, Donnelly, CA and Thompson, RN (2021). Supplementary material from "Interventions targeting non-symptomatic cases can be important to prevent local outbreaks: SARS-CoV-2 as a case study". [Data Collection]. The Royal Society. https://doi.org/10.6084/m9.figshare.c.5416023.v1

Mbaruku, G (2021). Testing the recording of priority facility-based, maternal and newborn coverage indicators for use in health management information systems. [Data Collection]. Ifakara Health Institute data repository. https://doi.org/10.17890/ihi.2017.09.99

Dorman, M, Thomson, NR and Campos, J (2021). Supporting data for "Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemic Vibrio cholerae infection". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13636577.v1

Brand, S and Ojal, J (2021). ojal/KenyaSerology. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4705243

Mitchell, K, Purcell, C, Forsyth, R, Barry, S, Hunter, R, Simpson, SA, McDaid, L, Elliot, L, McCann, M, Wetherall, K, Broccatelli, C, Bailey, JV and Moore, L (2021). A peer-led intervention to promote sexual health in secondary schools: the STASH feasibility study. [Data Collection]. University of Glasgow, Glasgow, Scotland. https://doi.org/10.5525/gla.researchdata.1110

Burke, R (2021). rachaelmburke/tbcovidblantyre. [Data Collection]. Github. https://github.com/rachaelmburke/tbcovidblantyre

Wright, K, de Silva, K, Plain, KM, Purdie, AC, Blair, TA, Duggin, IG, Britton, WJ and Oehlers, SH (2021). Source data for graphs. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1009186.s008

Wright, K, de Silva, K, Plain, KM, Purdie, AC, Blair, TA, Duggin, IG, Britton, WJ and Oehlers, SH (2021). miR-206 target prediction results from TargetScan analysis. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1009186.s007

Kelly-Hope, LA, Sanders, AM, Harding-Esch, E, Willems, J, Ahmed, F, Vincer, F and Hill, R (2021). Additional file 3 of Complex emergencies and the control and elimination of neglected tropical diseases in Africa: developing a practical approach for implementing safe and effective mapping and intervention strategies. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14355439.v1

Masselot, P (2021). PierreMasselot/Frontier-FrenchScientificYoutube. [Data Collection]. Github. https://github.com/PierreMasselot/Frontier-FrenchScientificYoutube

Pisani, E, Hasnida, A, Rahmi, M, Harsono, S, Kok, M and Anggriani, Y (2021). Supplementary material for Pisani et al: Substandard and falsified medicines: proposed methods for case finding and sentinel surveillance. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/SELJ0Z

Kessler, NJ (2021). knowah/bssnper2. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4647012

Lowe, R (2021). Data and R code to accompany 'Combined effects of hydrometeorological hazards and urbanisation on dengue risk in Brazil: a spatiotemporal modelling study'. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4632204

Wang, SV, Sreedhara, SK, Schneeweiss, S and REPEAT Initiative (2021). Reproducible Evidence: Practices to Enhance and Achieve Transparency (REPEAT). [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/MY5GN

Laban, N (2021). Comparable exposure to SARS-CoV-2 in young children and healthcare workers in Zambia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14237285.v2

Rees, E (2021). erees/seasonalHCoV. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4618261

Quilty, BJ, Hellewell, J, Clifford, S and CMMID COVID-19 working group (2021). R code for: "Confirmatory testing with a second lateral flow test may mitigate false positives at low levels of SARS-CoV-2 prevalence in English schools". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002074.

Davies, NG, Jarvis, CI, CMMID COVID-19 Working Group, Edmunds, WJ, Jewell, NP, Diaz-Ordaz, K and Keogh, RH (2021). Increased mortality in community-tested cases of SARS-CoV-2 lineage B.1.1.7. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4579856

Jung, S, Endo, A, Kinoshita, R and Nishiura, H (2021). SungmokJung/Projection_Japan_COVID19 v1.0.0. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4576936

Pavelka, M, van Zandvoort, K, Abbott, S, Sherratt, K, Majdan, M, Jarcuska, P, Krajci, M, Flasche, S and Funk, S (2021). Data and R code accompanying the manuscript "The impact of population-wide rapid antigen testing on SARS-CoV-2 prevalence in Slovakia". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4570938

Davies, NG, Abbott, S, Barnard, RC, Jarvis, CI, Kucharski, AJ, Munday, J, Pearson, CAB, Russell, TW, Tully, DC, Washburne, AD, Wenseleers, T, Gimma, A, Waites, W, Wong, KL, van Zandvoort, K, Silverman, JD, Diaz-Ordaz, K, Keogh, R, Eggo, RM, Funk, S, Jit, M, Atkins, KE and Edmunds, WJ (2021). Analysis data and code for "Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England". [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.4562961

Davies, NG, Abbott, S, Barnard, RC, Jarvis, CI, Kucharski, AJ, Munday, J, Pearson, CAB, Russell, TW, Tully, DC, Washburne, AD, Wenseleers, T, Gimma, A, Waites, W, Wong, KL, van Zandvoort, K, Silverman, JD, Diaz-Ordaz, K, Keogh, R, Eggo, RM, Funk, S, Jit, M, Atkins, KE and Edmunds, WJ (2021). Analysis data and code for "Estimated transmissibility and impact of SARS-CoV-2 Variant of Concern 202012/01 in England". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4549674

Sweeney, S, Cunnama, L, Laurence, Y, Garcia Baena, I, Kairu, A, Minyewelet, M, Eyob, H, Chatterjee, S, Toshniwal, M, Chikovani, I, Shingelia, N, Capeding,, TJ and Vassall, A (2021). Value TB Dataset: costs per intervention. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/QOI6IR

Bousema, T (2021). Data from: Higher gametocyte production and mosquito infectivity in chronic compared to incident Plasmodium falciparum infections. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.pc866t1n3

Chapman, LAC, Shukla, P and Lo, NC (2021). Comparison of COVID-19 vaccine prioritization strategies in the United States. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4516525

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Dahiru Balami, A, Said, SM, Zulkefli, NAM, Norsa’adah, B and Audu, B (2021). Additional file 1 of Improving malaria preventive practices and pregnancy outcomes through a health education intervention: A randomized controlled trial. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13627127.v1

Oliphant, NP, Ray, N, Bensaid, K, Ouedraogo, A, Gali, AY, Habi, O, Maazou, I, Panciera, R, Muñiz, M, Manda, SO, Sy, Z, Jackson, D and Doherty, T (2021). Supplementary Appendix 1c of "Toward a geography of community health workers in Niger: a geospatial analysis". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13536779.v5

Eyre, MT, Burns, R, Kirkby, V, Smith, C, Denaxas, S, Nguyen, V, Hayward, A, Shallcross, L, Fragaszy, E and Aldridge, RW (2021). Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study - Supplementary material, code and data. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/5J6DY

Mugiyo, H, Chimonyo, VGP, Sibanda, M, Kunz, R, Nhamo, L, Masemola, CR, Dalin, C, Modi, AT and Mabhaudhi, T (2021). S1 File for "Multi-criteria suitability analysis for neglected and underutilised crop species in South Africa". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0244734.s012

Abbott, S and Meakin, S (2021). epiforecasts/covid19.nhs.data: Initial release. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4447465

Scriba, TJ, Fiore-Gartland, A, Penn-Nicholson, A, Mulenga, H, Kimbung Mbandi, S, Borate, B, Mendelsohn, SC, Hadley, K, Hikuam, C, Kaskar, M, Musvosvi, M, Bilek, N, Self, S, Sumner, T, White, RG, Erasmus, M, Jaxa, L, Raphela, R, Innes, C, Brumskine, W, Hiemstra, A, Malherbe, ST, Hassan-Moosa, R, Tameris, M, Walzl, G, Naidoo, K, Churchyard, G and Hatherill, M (2021). RISK11 signature scores for the biomarker-guided tuberculosis preventive therapy (CORTIS) randomised controlled trial. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.13573337.v1

Bhaskaran, K and Inglesby, P (2021). opensafely/covid-vs-noncovid-deaths-research. [Data Collection]. Github. https://github.com/opensafely/covid-vs-noncovid-deaths-research

Sweeney, S, Cunnama, L, Laurence, Y, Garcia Baena, I, Kairu, A, Minyewelet, M, Eyob, H, Chatterjee, S, Toshniwal, M, Chikovani, I, Shingelia, N, Capeding, TJ and Vassall, A (2021). Value TB Dataset: costs per direct & ancillary service. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/UGYNGT

Oliphant, NP, Ray, N, Bensaid, K, Ouedraogo, A, Gali, AY, Habi, O, Maazou, I, Panciera, R, Muñiz, M, Sy, Z, Manda, S, Jackson, D and Doherty, T (2021). Supplementary Appendix 1b of "Optimising geographical accessibility to primary health care: a geospatial analysis of community health posts and community health workers in Niger". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4428176

Muchene, L and Safari, W (2021). Two-stage topic modelling of scientific publications: A case study of University of Nairobi, Kenya. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0243208.s006

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Ndwiga, L, Muteru, K, Wamae, K, Osoti, V, Akinyi, M, Omedo, I, Andagalu, B, Ghansah, A, Ishengoma, D, Amambua-Ngwa, A, Raman, J, Duah-Quashie, N, Tessema, S, Karema, C, Tukwasibwe, S, Djimde, A, Dondorp, A, Snow, R, Bejon, P and Ochola-Oyier, L (2020). Replication Data for: The emergence of an indigenous artemisinin-resistant Plasmodium falciparum in Africa. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/EUPXCF

Ssemata, AS, Opoka, RO, Ssenkusu, JM, Nakasujja, N, John, CC and Bangirana, P (2020). Final Z scores by regression for neurodevelopmental outcomes data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0240694.s001

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). Collated Results of the National and Subnational Estimates of the Covid 19 Reproduction Number (R) for the United Kingdom Based on Tests, Hospital Admissions and Deaths. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/4L3OKY

Hellewell, J, Lucas, T, Davis, E, Abbott, S, Gimma, A and Thompson, R (2020). timcdlucas/ringbp: Code as used in the paper "Engagement and adherence trade-offs for SARS-CoV-2 contact tracing". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4221774

Mugiyo, H, Mabhaudhi, T, Chimonyo, VGP, Dalin, C, Sibanda, M, Kunz, R, Modi, AT and Nhamo, L (2020). Multi-criteria suitability analysis for neglected and underutilised crop species in South Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13179881.v1

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). Continent Summary Reproduction Number (R) Based on Reported Deaths. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/A12ADQ

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Brazil Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/METDW2

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Germany Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/LNMJYJ

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for India Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/PRP6CY

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Italy Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/8DUSHZ

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for the United Kingdom Based on Deaths. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/QVWUJ5

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for the United Kingdom Based on Hospital Admissions. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/CCE4XT

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2020). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for the United States of America Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/BZ7FPH

Hogset, H, Horgan, C, Armstrong, J, Bergholt, M, Torraca, V, Chen, Q, Keane, T, Burgeon, L, Dallman, M, Mostowy, S and Stevens, M (2020). Research data supporting "In Vivo Biomolecular Imaging of Zebrafish Embryos using Confocal Raman Spectroscopy". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4059923

Nkosi-Gondwe, T (2020). Moderate to severe malnutrition in severe anemia study. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13061447.v1

Dorman, MJ, Domman, D, Poklepovich, T, Tolley, C, Zolezzi, G, Kane, L, Viñas, MR, Panagópulo, M, Moroni, M, Binsztein, N, Caffer, MI, Clare, S, Dougan, G, Salmond, GPC, Parkhill, J, Campos, J and Thomson, NR (2020). Supporting data for "Genomics of the Argentinian cholera epidemic elucidate the contrasting dynamics of epidemic and endemic Vibrio cholerae". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.11310131.v1

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Ojal, J, Brand, SPC, Were, V, Okiro, EA, Kombe, IK, Mburu, C, Aziza, R, Ogero, M, Agweyu, A, Warimwe, GM, Uyoga, S, Adetifa, IM, Scott, JAG, Otieno, E, Ochola-Oyier, LI, Agoti, CN, Kasera, K, Amoth, P, Mwangangi, M, Aman, R, Ng’ang’a, W, Tsofa, B, Bejon, P, Barasa, E, Keeling, MJ and Nokes, DJ (2020). Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/RXAIPS

Deenan, P, Koole, O and Wong, E (2020). Performance of computer-aided chest radiography for detection of TB in a community-based multimorbidity cohort in rural KwaZulu-Natal. [Data Collection]. AHRI Data Repository. https://doi.org/10.23664/AHRI.VUKUZAZI.CHESTXRAYPAPERDATA

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Tomkins, J, Hazel, W, Black, R, Smock, R and Sear, R (2020). An age-dependent ovulatory strategy explains the evolution of dizygotic twinning in humans. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.h70rxwdfw

Tsang, KK (2020). karatsang/rulesbased_logisticregression. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3988479

Herrett, E (2020). emilyherrett/qrisk_cprd_gold: QRISK bundle version 2.0. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3981237

Candido, DS, Claro, IM, de Jesus, JG, Souza, WM, Moreira, FRR, Dellicour, S, Mellan, TA, du Plessis, L, Pereira, RHM, Sales, FCS, Manuli, ER, Thézé, J, Almeida, L, Menezes, MT, Voloch, CM, Fumagalli, MJ, Coletti, TM, da Silva, CAM, Ramundo, MS, Amorim, MR, Hoeltgebaum, HH, Mishra, S, Gill, MS, Carvalho, LM, Buss, LF, Prete, CA, Ashworth, J, Nakaya, HI, Peixoto, PS, Brady, OJ, Nicholls, SM, Tanuri, A, Rossi, Átila D., Braga, CK, Gerber, AL, de C. Guimarães, AP, Gaburo, N, Alencar, CS, Ferreira, AC, Lima, CX, Levi, JE, Granato, C, Ferreira, GM, Francisco, RS, Granja, F, Garcia, MT, Moretti, ML, Perroud, MW, Castiñeiras, Terezinha M. P. P., Lazari, CS, Hill, SC, de Souza Santos, AA, Simeoni, CL, Forato, J, Sposito, AC, Schreiber, AZ, Santos, MNN, de Sá, CZ, Souza, RP, Resende-Moreira, LC, Teixeira, MM, Hubner, J, Leme, PAF, Moreira, RG, Nogueira, ML, Ferguson, NM, Costa, SF, Proenca-Modena, JL, Vasconcelos, ATR, Bhatt, S, Lemey, P, Wu, C, Rambaut, A, Loman, NJ, Aguiar, RS, Pybus, OG, Sabino, EC and Faria, NR (2020). Data from: Evolution and epidemic spread of SARS-CoV-2 in Brazil. [Data Collection]. Dryad. http://doi.org/10.5061/dryad.rxwdbrv5z

Liu, Y (2020). yangclaraliu/COVID19_NPIs_vs_Rt. [Data Collection]. Github. https://github.com/yangclaraliu/COVID19_NPIs_vs_Rt

Matowo, NS, Tanner, M, Munhenga, G, Mapua, SA, Finda, M, Utzinger, J, Ngowi, V and Okumu, FO (2020). Additional file 1 of Patterns of pesticide usage in agriculture in rural Tanzania call for integrating agricultural and public health practices in managing insecticide-resistance in malaria vectors. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.12668036.v1

Otieno, GP, Murunga, N, Agoti, CN, Gallagher, KE, Awori, JO and Nokes, DJ (2020). Replication Data for: Surveillance of endemic human coronaviruses (HCoV-NL63, OC43 and 229E) associated with pneumonia in Kilifi, Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/ZQ1DJY

Geer, A and Prowse, D (2020). PharmacoTXA Trial: Pharmacokinetics of Tranexamic Acid after oral, intramuscular or intravenous administration: a prospective, randomised, cross-over trial in healthy volunteers. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://freebird.lshtm.ac.uk/home/available-trials/

Leung, K, Jit, M, Lau, EHY and Wu, JT (2020). Social contact data for Hong Kong. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.3874808

Nightingale, E, Waterlow, N, Clifford, S and Rees, E (2020). COVID-19 length of hospital stay. [Data Collection]. Github. https://github.com/esnightingale/los_review

Indriani, C, Tantowijoyo, W, Rancès, E, Andari, B, Prabowo, E, Yusdi, D, Ansari, MR, Wardana, DS, Supriyati, E, Nurhayati, I, Ernesia, I, Setyawan, S, Fitriana, I, Arguni, E, Amelia, Y, Ahmad, RA, Jewell, NP, Dufault, SM, Ryan, PA, Green, BR, McAdam, TF, O'Neill, SL, Tanamas, SK, Simmons, CP, Anders, KL and Utarini, A (2020). Reduced dengue incidence following deployments of Wolbachia-infected Aedes aegypti in Yogyakarta, Indonesia: a quasi-experimental trial using controlled interrupted time series analysis. [Data Collection]. Gates Open Research. https://doi.org/10.12688/gatesopenres.13122.1

Lenhart, A, Morrison, AC, Paz-Soldan, VA, Forshey, BM, Cordova-Lopez, JJ, Astete, H, Elder, JP, Sihuincha, M, Gotlieb, EE, Halsey, ES, Kochel, TJ, Scott, TW, Alexander, N and McCall, PJ (2020). The impact of insecticide treated curtains on dengue virus transmission: A cluster randomized trial in Iquitos, Peru. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0008097.s003

Tetteh, KKA (2020). Optimisation and standardisation of a multiplex immunoassay of diverse Plasmodium falciparum antigens to assess sero-epidemiological changes in malaria transmission. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/AUJ35

Jombart, T, Abbott, S, Gimma, A, Van zandvoort, K and Jarvis, C (2020). Inferring COVID-19 cases from recent death. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3733046

Zameer, M, Phillips-White, N, Folorunso, O, Belt, R, Setayesh, H, Asghar, N and Chandio, A (2020). Immunization supply chain equity metrics for Pakistan. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.12032106.v1

van der Laan, LC, Meeks, KAC, Chilunga, FP, Agyemang, C, Venema, A, Mannens, Marcel M. A. M., Zafarmand, MH, Klipstein-Grobusch, K, Smeeth, L, Adeyemo, A and Henneman, P (2020). Epigenome-wide association study for perceived discrimination among sub-Saharan African migrants in Europe - the RODAM study. [Data Collection]. Scientific Reports. h.

Rahman, SIA, Dyson, ZA, Klemm, EJ, Khanam, F, Holt, KE, Chowdhury, EK, Dougan, G and Qadri, F (2020). Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0008036

Li, E, Mawji, A, Akech, S, Chandna, A, Kissoon, N, Kortz, T, Lubell, Y, Turner, P, Wiens, M and Ansermino, M (2020). Guidelines for the standardized collection of predictor variables in studies for pediatric sepsis (guidelines)~Pediatric Sepsis Predictors Standardization (PS2) Working Group. [Data Collection]. Scholars Portal Dataverse. https://doi.org/10.5683/SP2/02LVVT

Mooney, JP, Qendro, T, Keith, M, Philbey, AW, Groves, HT, Tregoning, JS, Goodier, MR and Riley, EM (2020). Data_Sheet_2_Natural Killer Cells Dampen the Pathogenic Features of Recall Responses to Influenza Infection. [Data Collection]. Frontiers. https://doi.org/10.3389/fimmu.2020.00135.s002

Vashist, P, Tandon, R, Murthy, G, Barua, C, Deka, D, Singh, S, Gupta, V, Gupta, N, Wadhwani, M, Singh, R and Vishwanath, K (2020). Association of cataract and sun exposure in geographically diverse populations of India: the case study. first report of the ICMR-EYE SEE study group. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.5qfttdz19

Hollingworth, S, Ruiz, F, Gad, M and Chalkidou, K (2020). iDSI HTA survey SSA Data sharing. [Data Collection]. The University of Queensland, Brisbane, Australia. https://doi.org/10.14264/uql.2020.178

DeCelles, J, Kaufman, Z, Bhauti, K, Hershow, R, Weiss, H, Chaibva, C, Moyo, N, Braunschweig, E, Mantula, F, Hatzold, K and Ross, D (2019). Voluntary medical male circumcision uptake through soccer in Zimbabwe. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/FI4R2V

Abbott, S (2019). seabbs/AssessBCGPolicyChange. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.2635687

León-Gómez, BB, Gotsens, M, Marí-Dell’Olmo, M, Domínguez-Berjón, MF, Luque-Fernandez, MA, Martin, U, Rodríguez-Sanz, M and Pérez, G (2019). MOESM4 of Bayesian smoothed small-areas analysis of urban inequalities in fertility across 1999–2013. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.11430522.v1

Költringer, FA, Rudgard, WE, Annerstedt, KS, Boccia, D and Carter, D (2019). Supporting data for: "The social determinants of national tuberculosis incidence rates in 116 countries: a longitudinal ecological study between 2005– 2015". [Data Collection]. OSF. https://osf.io/x6uag/

Zhang, J, Klepac, P, Read, J, Rosello, A, Wang, X, Lai, S, Li, M, Song, Y, Wei, Q, Jiang, H, Yang, J, Lynn, H, Flasche, S, Jit, M and Yu, H (2019). Social contact data for China mainland. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.3516113

Mendes Jorge, M, Ouermi, L, Meissner, P, Compaoré, G, Coulibaly, B, Nebie, E, Krisam, J, Klose, C, Kieser, M, Jahn, A, Lu, G, D'Alessandro, U, Sié, A, Mockenhaupt, FP and Müller, O (2019). Safety and efficacy of artesunate-amodiaquine combined with either methylene blue or primaquine in children with falciparum malaria in Burkina Faso: A randomized controlled trial. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0222993.s003

Ward, Z, Yeh, J, Bhakta, N, Frazier, AL, Girardi, F and Atun, R (2019). Simulation Results: Global Childhood Cancer Survival. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/PWPA9E

Delves, M, Lafuente-Monasterio, MJ, Upton, L, Ruecker, A, Leroy, D, Gamo, F and Sinden, R (2019). Table 1 - Fueling Open Innovation for Malaria Transmission-Blocking Drugs: Hundreds of Molecules Targeting Early Parasite Mosquito Stages. [Data Collection]. Frontiers in Microbiology. https://doi.org/10.3389/fmicb.2019.02134

Arunga, S (2019). The management of microbial keratitis within Uganda’s primary health system: a situational analysis. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/MSLAOS

Otieno, GP, Bottomley, C, Khagayi, S, Ogwel, B and Nokes, DJ (2019). Replication Data for: Impact of the introduction of rotavirus vaccine on hospital admissions for diarrhoea among children in Kenya: A controlled interrupted time series analysis. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/PH4COG

London School of Hygiene & Tropical Medicine (2019). The conjunctival transcriptome in Ethiopians after trichiasis surgery: associations with the development of eyelid contour abnormalities and the effect of oral doxycycline treatment. [Data Collection]. NCBI Gene Expression Omnibus. https://identifiers.org/geo:GSE135455

Derrick, T (2019). EXTENDED DATA [The conjunctival transcriptome in Ethiopians after trichiasis surgery: associations with the development of eyelid contour abnormalities and the effect of oral doxycycline treatment]. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.9696263.v1

Derrick, T (2019). The conjunctival transcriptome in Ethiopians after trichiasis surgery: associations with the development of eyelid contour abnormalities and the effect of oral doxycycline treatment. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.9696143.v1

Caruso, BA, Sclar, GD, Routray, P, Nagel, C, Majorin, F, Sola, S, Koehne, W, DeShay, R, Udaipuria, S, Williams, R and Clasen, T (2019). Impact of a multi-level intervention, Sundara Grama, on latrine use and safe disposal of child faeces in rural Odisha, India. [Data Collection]. Harvard Dataverse. https://doi.org/10.23846/TW14IE119.

Desmond, C, Seeley, J and Barnett, T (2019). AHRI.Emergent Properties.2016-2017.v1. [Data Collection]. Africa Health Research Institute. https://doi.org/10.23664/AHRI.Emergent.Properties.v1

Wang, X, Bourne, A, Liu, P, Sun, J, Cai, T, Mburu, G, Cassolato, M, Wang, B and Zhou, W (2019). Data from: Understanding willingness to use oral pre-exposure prophylaxis for HIV prevention among men who have sex with men in China. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.806382j

Demissie, SD, Larson, H, Chantler, T, Kozuki, N, Karafillakis, E, Landegger, J, Kiapi, L, Gebrekirstos, P, Mohammad, S, Wodajo, S and Langston, A (2019). Closing the immunisation gap in Ethiopia: a formative evaluation of 'The Fifth Child Project'. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/Z75DUF

Agoti, CN, Plan, MVT, Munywoki, PK, Githinji, G, Medley, GF, Cane, PA, Kellam, P, Cotten, M and Nokes, DJ (2019). Replication Data for: Genomic analysis of respiratory syncytial virus infections in households and utility in inferring who infects the infant. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/DUCQWE

Cox, SE (2019). Dataset and dictionary for inpatient mortality in a TB ward in the Philippines. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.8217443.v1

Mota, JF, Lee, N, White, LV, Marin, FP, Saludar, NR, Solante, MB, Tactacan-Abrenica, RJC, Calapis, RW, Suzuki, M, Saito, N, Ariyoshi, K, Parry, CM, Edwards, T and Cox, SE (2019). Mid-upper arm circumference predicts death in adult patients admitted to a TB ward in the Philippines: A prospective cohort study. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.8003318.v1

Arunga, S (2019). Traditional Eye Medicine use in Microbial Keratitis in Uganda. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/5GOPKZ

Slater, HC, Ross, A, Felger, I, Hofmann, NE, Robinson, L, Cook, J, Gonçalves, BP, Björkman, A, Ouedraogo, AL, Morris, U, Msellem, M, Koepfli, C, Mueller, I, Tadesse, F, Gadisa, E, Domingo, G, Kapulu, M, Midega, J, Owusu-Agyei, S, Nabet, C, Piarroux, R, Doumbo, O, Doumbo, SN, Koram, K, Lucchi, N, Udhayakumar, V, Mosha, J, Tiono, A, Chandramohan, D, Gosling, R, Mwingira, F, Sauerwein, R, Riley, EM, White, NJ, Nosten, F, Imwong, M, Bousema, T, Drakeley, C and Okell, LC (2019). Data from: The temporal dynamics and infectiousness of subpatent Plasmodium falciparum infections in relation to parasite density. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.75t5382

Webster, J, Landegger, J, Bruce, J, Malunda, D, Chantler, T, Kumakech, E, Schmucker, L, Kiapi, L, Kozuki, N, Olorunsaiye, C and Byrne, E (2019). Impacts of IRC’s Fifth Child community engagement strategy to increase immunisation in northern Uganda. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/6XGSOE

Barry, A, Behet, MC, Nébié, I, Lanke, K, Grignard, L, Ouedraogo, A, Soulama, I, Drakeley, C, Sauerwein, R, Bolscher, JM, Dechering, KJ, Bousema, T, Tiono, AB and Gonçalves, BP (2019). Data from: Functional antibodies against Plasmodium falciparum sporozoites are associated with a longer time to qPCR-detected infection among schoolchildren in Burkina Faso. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.n1m33qq

Barry, A, Behet, MC, Nébié, I, Lanke, K, Grignard, L, Ouedraogo, A, Soulama, I, Drakeley, C, Sauerwein, R, Bolscher, JM, Dechering, KJ, Bousema, T, Tiono, AB and Gonçalves, BP (2019). Functional antibodies against Plasmodium falciparum sporozoites are associated with a longer time to qPCR-detected infection among schoolchildren in Burkina Faso. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.n1m33qq

Seeley, J and Edwards, A (2019). The direct and indirect effects of HIV/ AIDS on the Health and wellbeing of older people study (WOPS)- Wave 3. [Data Collection]. AHRI Data Repository. https://data.ahri.org/index.php/catalog/914

Muthui, MK, Mogeni, P, Mwai, K, Nyundo, C, Macharia, A, Williams, TN, Nyangweso, G, Wambua, J, Mwanga, D, Marsh, K, Bejon, P and Kapulu, MC (2019). Kilifi Malaria Longitudinal Cohort cross-sectional survey and weekly-follow-up surveillance data for the estimation of parasite prevalence and factors associated with gametocyte carriage. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/18QB3V

Haque, F, Rahman, M, Banu, NN, Sharif, AR, Jubayer, S, Shamsuzzaman, A, Alamgir, A, Erasmus, JH, Guzman, H, Forrester, N, Luby, SP and Gurley, ES (2019). De-identified symptom duration data in SPSS. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0212218.s007

Haque, F, Rahman, M, Banu, NN, Sharif, AR, Jubayer, S, Shamsuzzaman, A, Alamgir, A, Erasmus, JH, Guzman, H, Forrester, N, Luby, SP and Gurley, ES (2019). Syndromic survey de-identified data in SPSS. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0212218.s005

Grant, AD, Baisley, K, Mzembe, T and Edwards, A (2019). Incidence of tuberculosis infection among adolescents in rural KwaZulu-Natal, South Africa, 2017-2018. [Data Collection]. AHRI Data Repository. https://data.ahri.org/index.php/catalog/912/

Lukindu, M, Bergey, CM, Wiltshire, RM, Small, ST, Bourke, BP, Kayondo, JK and Besansky, NJ (2019). Data from: Spatio-temporal genetic structure of Anopheles gambiae in the Northwestern Lake Victoria Basin, Uganda: implications for genetic control trials in malaria endemic regions. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.7p177s7

Babu, G (2019). Small for gestational age babies and depressive symptoms of mothers during pregnancy : Results from a birth cohort in India. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/BV8F6

Pacho, A and Fuller, S (2019). Precise Q1Q2 data_deidentified full dataset. [Data Collection]. St George's, University of London, London, United Kingdom. https://doi.org/10.24376/RD.SGUL.7660790.V1

Torres, AG, Vidal, RM, Muhsen, K, Tennant, SM, Svennerholm, A, Sow, SO, Sur, D, Zaidi, AKM, Faruque, ASG, Saha, D, Adegbola, R, Hossain, MJ, Alonso, PL, Breiman, RF, Bassat, Q, Tamboura, B, Sanogo, D, Onwuchekwa, U, Manna, B, Ramamurthy, T, Kanungo, S, Ahmed, S, Qureshi, S, Quadri, F, Hossain, A, Das, SK, Antonio, M, Mandomando, I, Nhampossa, T, Acácio, S, Omore, R, Ochieng, JB, Oundo, JO, Mintz, ED, O’Reilly, CE, Berkeley, LY, Livio, S, Panchalingam, S, Nasrin, D, Farag, TH, Wu, Y, Sommerfelt, H, Robins-Browne, RM, Del Canto, F, Hazen, TH, Rasko, DA, Kotloff, KL, Nataro, JP and Levine, MM (2019). Colonization factors among enterotoxigenic Escherichia coli isolates from children with moderate-to-severe diarrhea and from matched controls in the Global Enteric Multicenter Study (GEMS). [Data Collection]. PLoS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0007037

Karuga, RN, Mireku, M, Muturi, N, McCollum, R, Vallieres, F, Kumar, M, Taegtmeyer, M and Otiso, L (2019). Supportive supervision of close-to-community providers of health care: Findings from action research conducted in two counties in Kenya. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0216444

Mistry, MN (2019). A high spatiotemporal resolution global gridded dataset of historical (1970-2018) human discomfort Indices based on GLDAS data. [Data Collection]. PANGAEA. https://doi.org/10.1594/PANGAEA.904282

Bastiaens, GJH, Tiono, AB, Okebe, J, Pett, HE, Coulibaly, SA, Gonçalves, BP, Affara, M, Ouédraogo, A, Bougouma, EC, Sanou, GS, Nébié, I, Bradley, J, Lanke, KHW, Niemi, M, Sirima, SB, d’Alessandro, U, Bousema, T and Drakeley, C (2018). Data from: Safety of single low-dose primaquine in glucose-6-phosphate dehydrogenase deficient falciparum-infected African males: two open-label, randomized, safety trials. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.230ps

ACTwatch Group (2018). ACTwatch Outlet Survey Files: Kenya 2010. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.5016128

Brady, OJ (2018). Microcephaly and potential exposure data in Brazil 2015-2017. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.7359197.v1

Kombe, IK, Munywoki, PK, Baguelin, M, Nokes, DJ and Medley, GF (2018). Replication dataset for: Model-based estimates of transmission of respiratory syncytial virus within households. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/BPSZZS

Arora, NK, Nair, MKC, Gulati, S, Deshmukh, V, Mohapatra, A, Mishra, D, Patel, V, Pandey, RM, Das, BC, Divan, G, Murthy, GVS, Sharma, TD, Sapra, S, Aneja, S, Juneja, M, Reddy, SK, Suman, P, Mukherjee, SB, Dasgupta, R, Tudu, P, Das, MK, Bhutani, VK, Durkin, MS, Pinto-Martin, J, Silberberg, DH, Sagar, R, Ahmed, F, Babu, N, Bavdekar, S, Chandra, V, Chaudhuri, Z, Dada, T, Dass, R, Gourie-Devi, M, Remadevi, S, Gupta, JC, Handa, KK, Kalra, V, Karande, S, Konanki, R, Kulkarni, M, Kumar, R, Maria, A, Masoodi, MA, Mehta, M, Mohanty, SK, Nair, H, Natarajan, P, Niswade, AK, Prasad, A, Rai, SK, Russell, PSS, Saxena, R, Sharma, S, Singh, AK, Singh, GB, Sumaraj, L, Suresh, S, Thakar, A, Parthasarathy, S, Vyas, B, Panigrahi, A, Saroch, MK, Shukla, R, Rao, KVR, Silveira, MP, Singh, S and Vajaratkar, V (2018). Neurodevelopmental disorders in children aged 2–9 years: Population-based burden estimates across five regions in India. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1002615.s009

Morpeth, SC, Munywoki, PK, Hammitt, LL, Bett, A, Bottomley, C, Onyango, CO, Murdoch, DR, Nokes, DJ and Scott, A (2018). Replication Data for: Nasopharyngeal pneumococcal concentration among children in a longitudinal study of household respiratory virus transmission in Kilifi, Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/A0AXNN

Cusick, S, Jaramillo, E, Moody, E, Ssemata, AS, Bitwayi, D, Lund, T and Mupere, E (2018). Additional file 1: of Assessment of blood levels of heavy metals including lead and manganese in healthy children living in the Katanga settlement of Kampala, Uganda. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.6465632.v1

Ominde, MS and Scott, A (2018). Replication Data for: Reliability and validity of the World Health Organization reading standards for paediatric chest radiographs used in the field in an impact study of Pneumococcal Conjugate Vaccine in Kilifi, Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/WYAPHO

Pillay, D, Koole, O and Wong, E (2018). Vukuzazi Machine Learning Chest X-ray project among individuals aged 15 years and above in rural KwaZulu Natal, South Africa, 2018. [Data Collection]. Africa Health Research Institute. https://data.ahri.org/index.php/catalog/909/

Jeffries, CL, Rogers, ME and Walker, T (2018). Establishment of a method for Lutzomyia longipalpis sand fly embryo microinjection: the first step towards potential novel control strategies for leishmaniasis. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/S7CZP

Mysiak, J, Torresan, S, Bosello, F, Mistry, M, Amadio, M, Marzi, S, Furlan, E and Sperotto, A (2018). Climate risk index for Italy. [Data Collection]. Zenodo. https://zenodo.org/records/5506630

Davies, NG and Gardner, A (2018). Data from: Monogamy promotes altruistic sterility in insect societies. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.gt8b5

Leung, K, Jit, M, Lau, EHY and Wu, JT (2018). Social contact data for Hong Kong. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.1165562

Mossong, J, Hens, N, Jit, M, Beutels, P, Auranen, K, Mikolajczyk, R, Massari, M, Salmaso, S, Tomba, GS, Wallinga, J, Heijne, J, Sadkowska-Todys, M, Rosinska, M and Edmunds, WJ (2017). POLYMOD social contact data. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.1215899

Kaindoa, EW, Matowo, NS, Ngowo, HS, Mkandawile, G, Mmbando, A, Finda, M and Okumu, FO (2017). Interventions that effectively target Anopheles funestus mosquitoes could significantly improve control of persistent malaria transmission in south–eastern Tanzania. Supplementary data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0177807.s001

Jasseh, M, D'Alessandro, U and Dondeh, BL (2017). The Gambia - Farafenni INDEPTH Core Dataset 1982-2014 (Release 2017). [Data Collection]. INDEPTH Network. https://doi.org/10.7796/INDEPTH.GM011.CMD2014.v1

Bousema, T, Stresman, G, Baidjoe, AY, Bradley, J, Knight, P, Stone, W, Osoti, V, Makori, E, Owaga, C, Odongo, W, China, P, Shagari, S, Doumbo, OK, Sauerwein, RW, Kariuki, S, Drakeley, C, Stevenson, J and Cox, J (2017). Data from: The impact of hotspot-targeted interventions on malaria transmission in Rachuonyo south district in the western Kenyan highlands: a cluster-randomized controlled trial. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.nr8d8

Omedo, I, Mogeni, P and Rockett, K (2017). Dataset 1: Genotyping results for 111 single nucleotide polymorphisms (SNPs) typed in 2486 Plasmodium falciparum samples collected from primary school children during a parasitological survey in western Kenya in 2009 and 2010. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.4806619.v1

Omedo, I, Mogeni, P and Rockett, K (2017). Dataset 2: Single nucleotide polymorphisms (SNPs) and distance differences between Plasmodium falciparum parasite pairs sampled during a parasitological survey of primary school children in western Kenya. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.4806631.v1

Xie, J, Chen, P, Zhang, J, Gao, Z, Neves, H, Zhang, S, Wen, Q, Chen, W, Kwok, HF and Lin, Y (2017). The prognostic significance of DAPK1 in bladder cancer. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0175290.s004

Modell, B, Darlison, MW, Moorthie, S, Blencowe, H, Petrou, M and Lawn, JE (2016). Epidemiological Methods in Community Genetics and the Modell Global Database of Congenital Disorders (MGDb). [Data Collection]. UCL Discovery. https://discovery.ucl.ac.uk/id/eprint/1532179

Kliemann, BS, Levin, AS, Moura, ML, Boszczowski, I and Lewis, JJ (2016). Data from: Socioeconomic determinants of antibiotic consumption in the state of São Paulo, Brazil: the effect of restricting over-the-counter sales. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.mt685

Carr, T, Yang, H and Ray, C (2016). Data for: "Temporal Variations of Water Productivity in Irrigated Corn: An Analysis of Factors Influencing Yield and Water Use across Central Nebraska". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0161944.s001

Schallig, Henk D. F. H., Altaras, R, Nuwa, A, Agaba, B, Streat, E, Tibenderana, JK, Martin, S and Strachan, CE (2016). Data from: How do patients and health workers interact around malaria rapid diagnostic testing, and how are the tests experienced by patients in practice? A qualitative study in western Uganda. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.39np4

Jasseh, M, D'Alessandro, U and Dondeh, BL (2016). Farafenni INDEPTH Core Dataset 1982-2013 (Release 2016). [Data Collection]. INDEPTH Network. https://doi.org/10.7796/INDEPTH.GM011.CMD2013.v1

Wen, Q, Kim, C, Hamilton, PW and Zhang, S (2016). Additional file 1 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3624356_D4.v1

Wen, Q, Kim, C, Hamilton, P and Zhang, S (2016). Additional file 2 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3624356_D2.v1

Wen, Q, Kim, C, Hamilton, P and Zhang, S (2016). Additional file 3 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3624356_D3.v1

Wen, Q, Kim, C, Hamilton, P and Zhang, S (2016). Additional file 4 of A gene-signature progression approach to identifying candidate small-molecule cancer therapeutics with connectivity mapping. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3624356_D1.v1

Nicholls, SG, Quach, P, von Elm, E, Guttmann, A, Moher, D, Petersen, I, Sørensen, HT, Smeeth, L, Langan, SM and Benchimol, EI (2016). Data from: The REporting of studies Conducted using Observational Routinely-collected health Data (RECORD) statement: methods for arriving at consensus and developing reporting guidelines. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.7d65n

Shihab, HA, Gaunt, TR, Hemani, G, Relton, CL and Davey Smith, G (2016). ARIES mQTL results. [Data Collection]. University of Bristol, Bristol, United Kingdom. https://doi.org/10.5523/bris.r9bxayo5mmk510dczq6golkmb

Campbell, O, Cegolon, L, Macleod, D and Benova, L (2016). Length of Stay After Childbirth in 92 Countries and Associated Factors in 30 Low- and Middle-Income Countries: Compilation of Reported Data and a Cross-sectional Analysis from Nationally Representative Surveys. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1001972

de Witt Huberts, JC (2016). BCD Formative Research for PrEP Demand Creation. [Data Collection]. Data Archiving and Networked Services (DANS). https://doi.org/10.17026/dans-xpq-v3y2

Mbonye, AK, Buregyeya, E, Rutebemberwa, E, Clarke, S, Lal, S, Hansen, KS, Magnussen, P and LaRussa, P (2016). Data from: Prescription of antibiotics at drug shops and strategies to improve quality of care and patient safety: a cross-sectional survey in the private sector in Uganda. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.9c87t

Holt, KE (2016). Acinetobacter baumannii GC1 recombination analysis. [Data Collection]. University of Melbourne. https://doi.org/10.4225/49/5690B341A0FDB

Hanson, C, Waiswa, P, Marchant, T, Marx, M, Manzi, F, Mbaruku, G, Rowe, A, Tomson, G, Schellenberg, J and Peterson, S (2016). Expanded Quality Management Using Information Power for Maternal and Newborn Health in Africa (EQUIP). [Data Collection]. Ifakara Health Institute, Dar es Salaam, Tanzania. https://doi.org/10.17890/ihi.2014.04.99

Landay, A, Reither, K, Katsoulis, L, Beattie, T, Gardiner, N, Lenz, N, Said, K, Mfinanga, E, Pohl, C, Fielding, KL, Jeffery, H, Kagina, BM, Hughes, EJ, Scriba, TJ, Hanekom, WA, Hoff, ST, Bang, P, Kromann, I, Daubenberger, C, Andersen, P and Churchyard, GJ (2015). Data from: Safety and immunogenicity of H1/IC31®, an adjuvanted TB subunit vaccine, in HIV-infected adults with CD4+ Lymphocyte counts greater than 350 cells/mm3: a phase II, multi-centre, double-blind, randomized, placebo-controlled trial. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.r61r8

Chung The, H, Rabaa, MA, Pham Thanh, D, Ruekit, S, Wangchuk, S, Dorji, T, Pem Tshering, K, Nguyen Thi Nguyen, T, Voong Vinh, P, Ha Thanh, T, Nguyen Ngoc Minh, C, Turner, P, Sar, P, Thwaites, G, Holt, KE, Thomson, NR, Bodhidatta, L, Mason, CJ and Baker, S (2015). The introduction and establishment of fluoroquinolone resistant Shigella sonnei into Bhutan. [Data Collection]. Figshare.

Siraj, AS, Bouma, MJ, Santos-Vega, M, Yeshiwondim, AK, Rothman, DS, Yadeta, D, Sutton, PC and Pascual, M (2015). Data from: Temperature and population density determine reservoir regions of spatial persistence in highland malaria. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.kc20m

Owusu, R, Asante, KP, Mahama, E, Awini, E, Anyorigiya, T, Dosoo, D, Amu, A, Jakpa, G, Ofei, E, Segbaya, S, Oduro, AR, Gyapong, M, Hodgson, A, Bart-Plange, C and Owusu-Agyei, S (2015). Glucose-6-Phosphate Dehydrogenase Deficiency and haemoglobin drop after Sulphadoxine-Pyrimethamine use for Intermittent Preventive Treatment of Malaria during pregnancy in Ghana - a cohort study. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.1512815.v1

Reuter, S, Corander, J, de Been, M, Harris, S, Cheng, L, Hall, M, Thomson, NR and McNally, A (2015). Directional gene flow and ecological separation in Yersinia enterocolitica. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.1482060.v1

Cornick, JE, Chaguza, C, Harris, SR, Yalcin, F, Senghore, M, Kiran, AM, Govindpershad, S, Ousmane, S, Plessis, MD, Pluschke, G, Ebruke, C, McGee, L, Sigaùque, B, Collard, J, Antonio, M, von Gottberg, A, French, N, Klugman, KP, Heyderman, RS, Bentley, SD and Everett, DB (2015). Region specific diversification of the highly virulent serotype 1 Streptococcus pneumoniae. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.1472901.v1

Pigott, DM, Bhatt, S, Golding, N, Duda, KA, Battle, KE, Brady, OJ, Messina, JP, Balard, Y, Bastien, P, Pratlong, F, Brownstein, JS, Freifeld, CC, Mekaru, SR, Gething, PW, George, DB, Myers, MF and Hay, SI (2015). Data from: Global distribution maps of the Leishmaniases. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.05f5h

Hanifa, Y, Telisinghe, L, Fielding, KL, Malden, JL, Churchyard, GJ, Grant, AD and Charalambous, S (2015). The diagnostic accuracy of urine lipoarabinomannan test for tuberculosis screening in a South African correctional facility. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.1399199.v1

Meyer-Rath, G, Pienaar, J, Brink, B, Van Zyl, A, Muirhead, D, Grant, AD, Churchyard, GJ, Watts, C and Vickerman, P (2015). The impact of company-level ART provision to a mining workforce in South Africa: a cost–benefit analysis. [Data Collection]. Boston University Libraries. https://hdl.handle.net/2144/10817

Camacho, A, Kucharski, AJ, Aki-Sawyerr, Y, White, MA, Flasche, S, Baguelin, M, Pollington, TM, Carney, J, Glover, R, Smout, E, Tiffany, A, Edmunds, WJ and Funk, S (2015). Bed capacity for Ebola patients in Sierra Leone. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.1304889.v1

Binyaruka, P, Patouillard, E, Powell-Jackson, T, Greco, G, Maestad, O and Borghi, J (2015). Effect of paying for performance on utilisation, quality, and user costs of health services in Tanzania: a controlled before and after study. [Data Collection]. Ifakara Health Institute, Dar es Salaam, Tanzania. https://doi.org/10.17890/IHI.2013.02.99

Caputo, B, Nwakanma, D, Caputo, FP, Jawara, M, Oriero, C, Adiamoh, M, Dia, I, Konate, L, Petrarca, V, Pinto, J, Conway, DJ, della Torre, A, Oriero, EC and Hamid-Adiamoh, M (2014). Data from: Prominent intra-specific genetic divergence within Anopheles gambiae sibling species triggered by habitat discontinuities across a riverine landscape. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.601fk

Borghi, J, Mamdani, M, Abdulla, S, Mayumana, I, Mashasi, I, Binyaruka, P, Patouillard, E, Njau, I and Maestad, O (2014). Evaluation of a pay for performance programme in Pwani region in Tanzania: A controlled before and after study, PROCESS. [Data Collection]. Ifakara Health Institute, Dar es Salaam, Tanzania. https://doi.org/10.17890/ihi.2012.01.99

Borghi, J, Mamdani, M, Abdulla, S, Mayumana, I, Mashasi, I, Binyaruka, P, Patouillard, E, Njau, I and Maestad, O (2014). Evaluation of a pay for performance programme in Pwani region in Tanzania: A controlled before and after study, IMPACT. [Data Collection]. Ifakara Health Institute, Dar es Salaam, Tanzania. https://doi.org/10.17890/ihi.2012.12.99

Overgaard, H, Moore, S, Lorenz, L and Kisinza, W (2014). The useful life of bednets for malaria control in Tanzania: Attrition, Bioefficacy, Chemistry, Durability and insecticide Resistance - Household survey 2013, Retrospective household survey. [Data Collection]. Ifakara Health Institute, Dar es Salaam, Tanzania. https://doi.org/10.17890/ihi.2013.06.99

Ramagopalan, SV, Skingsley, A, Handunnetthi, L, Magnus, D, Pakpoor, J and Goldacre, B (2014). Data set of primary outcome changes in interventional clinical trials registered on ClinicalTrials.org. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.967827.v1

Rural AIDS & Development Action Research Programme, University of the Witwatersrand, London School of Hygiene and Tropical Medicine and Small Enterprise Foundation (2014). Intervention with Microfinance for AIDS and Gender Equity 2001-2003. [Data Collection]. DataFirst. https://doi.org/10.25828/yebs-j953

Brady, OJ (2013). Model of adult Aedes aegypti survival/mortality at different temperatures. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.865034.v1

Brady, OJ (2013). Model of adult Aedes albopictus survival/mortality at different temperatures. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.865035.v1

Churcher, TS, Bousema, T, Walker, M, Drakeley, C, Schneider, P, Ouédraogo, AL and Basáñez, M (2013). Data from: Predicting mosquito infection from Plasmodium falciparum gametocyte density and estimating the reservoir of infection. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.0k402

Schneider, P, Bousema, T, Gouagna, LC, Otieno, S, van de Vegte-Bolmer, M, Omar, SA and Sauerwein, RW (2013). Data from: Submicroscopic Plasmodium falciparum gametocyte densities frequently result in mosquito infection. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.589ft

Newton, CR, Ngugi, AK, Bottomley, C, Kleinschmidt, I, Wagner, RG, Kakooza-Mwesige, A, Ae-Ngibise, K, Owusu-Agyei, S, Masanja, H, Kamuyu, G, Odhiambo, R, Chengo, E and Sander, JW (2013). Epidemiology and Treatment of Epilepsy in sub-Saharan Africa. [Data Collection]. INDEPTH Network. https://doi.org/10.7796/INDEPTH.GH002.SEEDS.v1

Wurie, F, Le Polain de Waroux, OL, Brande, M, DeHaan, W, Holdgate, K, Mannan, R, Milton, D, Swerdlow, D and Hayward, A (2013). Exhaled particle production data. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.106632.v1

Jaramillo, JF, Olano, VA, Vargas, S, Sarmiento-Senior, D, Overgaard, HJ and Alexander, N (2013). Escuelas saludables: reduciendo las enfermedades de diarrea y dengue en las escuelas rurales de Anapoima y La Mesa, Cundinamarca. [Data Collection]. Universidad El Bosque, Bogotá, Colombia. http://hdl.handle.net/20.500.12495/9389

Deitz, KC, Athrey, G, Reddy, MR, Overgaard, HJ, Matias, A, Jawara, M, della Torre, A, Petrarca, V, Pinto, J, Kiszewski, AE, Kengne, P, Costantini, C, Caccone, A, Slotman, MA, Jawara, M and Athrey, G (2012). Data from: Genetic isolation within the malaria mosquito Anopheles melas. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.d15d4

Rachet, B, Westlake, S, Cooper, N, Shah, A, Quinn, M and Coleman, MP (2007). Cancer survival in the 'Spearhead' Primary Care Trusts of England, 1996-2003. [Data Collection]. The National Archives UK. https://data.gov.uk/dataset/cancer_survival_in_the_spearhead_primary_care_trusts_of_england

Rachet, B, Coleman, MP, Cooper, N and Quaresma, M (2006). Cancer survival in the Strategic Health Authorities of England, 1996-2003. [Data Collection]. Office for National Statistics. https://web.archive.org/web/20101113201310/http://www.statistics.gov.uk/StatBase/Product.asp?vlnk=11991

Rachet, B, Coleman, MP, Cooper, N and Elgohari, S (2006). Cancer survival in the Strategic Health Authorities of England, 1997-2004. [Data Collection]. Office for National Statistics. http://www.ons.gov.uk/ons/dcp19975_154103.xml

Rachet, B, Coleman, MP, Cooper, N, Quinn, M and Wood, H (2005). Long-term Breast Cancer Survival, England and Wales, up to 2003. [Data Collection]. Office for National Statistics. https://web.archive.org/web/20070111035057/http://www.statistics.gov.uk/STATBASE/ssdataset.asp?vlnk=9132&More=Y

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer Survival: England 1998-2003. [Data Collection]. Office for National Statistics, London, United Kingdom. https://web.archive.org/web/20070610223546/http://www.statistics.gov.uk/STATBASE/ssdataset.asp?vlnk=8982

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer Survival: England and Wales, 1991-2001, four major cancers. [Data Collection]. Office for National Statistics. https://web.archive.org/web/20070312224943/http://www.statistics.gov.uk/statbase/ssdataset.asp?vlnk=7091

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer Survival: England and Wales, 1991-2001, less common cancers by age group. [Data Collection]. Office for National Statistics, London, United Kingdom. https://web.archive.org/web/20070505052934/http://www.statistics.gov.uk/statbase/ssdataset.asp?vlnk=8904

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer survival in the strategic health authorities of England, 1995-2002. [Data Collection]. Office for National Statistics. https://web.archive.org/web/20070715075347/http://www.statistics.gov.uk/statbase/Product.asp?vlnk=11991

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer survival: England and Wales, 1991-2001, twenty major cancers. [Data Collection]. Office for National Statistics. https://web.archive.org/web/20070505052816/http://www.statistics.gov.uk/statbase/ssdataset.asp?vlnk=7898

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer survival: England and Wales, 1991-2001, twenty major cancers by age group. [Data Collection]. Office for National Statistics, London, United Kingdom. https://web.archive.org/web/20090629232158/http://www.statistics.gov.uk/statbase/ssdataset.asp?vlnk=7899

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer survival: five year relative survival rates in England by Health Authority up to 1999. [Data Collection]. Office for National Statistics. https://web.archive.org/web/20060221012923/http://www.statistics.gov.uk/StatBase/ssdataset.asp?vlnk=4878&More=Y

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer survival: five year relative survival rates in England by Health Authority up to 1999 - four further cancer sites. [Data Collection]. Office for National Statistics, London, United Kingdom. https://web.archive.org/web/20060221012955/http://www.statistics.gov.uk/StatBase/ssdataset.asp?vlnk=5388&More=Y

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer survival: five year relative survival rates in England by Health Authority up to 2000. [Data Collection]. Office for National Statistics, London, United Kingdom. https://web.archive.org/web/20060221013017/http://www.statistics.gov.uk/StatBase/ssdataset.asp?vlnk=5389&More=Y

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Cancer survival: five year relative survival rates in England by Health Authority up to 2000 - four further cancer sites. [Data Collection]. Office for National Statistics, London, United Kingdom. http://web.archive.org/web/20060222052104/http://www.statistics.gov.uk/STATBASE/ssdataset.asp?vlnk=5392&More=Y

Rachet, B, Coleman, MP, Cooper, N and Quinn, M (2005). Survival rates in England by Strategic Health Authority up to 2001. [Data Collection]. Office for National Statistics. https://web.archive.org/web/20070109133352/http://www.statistics.gov.uk/downloads/theme_health/SurvivalRatesbySHA2001Data.xls

This list was generated on Fri Mar 29 02:19:05 2024 GMT.