Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates

Damilola R. Oresegun, Peter Thorpe, Benavente, E, Campino, S, Fauzi Muh, Moon, RW, Clark, T and Cox-Singh, J. 2021. Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates. [Online]. Zenodo. Available from: https://doi.org/10.5281/zenodo.5598263

Damilola R. Oresegun, Peter Thorpe, Benavente, E, Campino, S, Fauzi Muh, Moon, RW, Clark, T and Cox-Singh, J. Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates [Internet]. Zenodo; 2021. Available from: https://doi.org/10.5281/zenodo.5598263

Damilola R. Oresegun, Peter Thorpe, Benavente, E, Campino, S, Fauzi Muh, Moon, RW, Clark, T and Cox-Singh, J (2021). Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5598263

Description

Supporting data for the attached publication. De Novo assembled genomes of Plasmodium knowlesi generated using Nanopore long reads. Supporting statistical results are included. Variant call files from structural variant calls are attached for each genome. Additionally, statistical results from BUSCO, QUAST, Pomoxis and AGAT are included. Annotation files in GFF3 format including further analyses of these annotation files are attached. Scripts for post analysis are attached with scripts for data generation presented on Github repository: "Pknowlesi_denovo_genome_assembly"

Methods

Data capture method	Unknown
Date (Date published in a 3rd party system)	10 November 2021
Language(s) of written materials	English

People & Groups

Data Creators	Damilola R. Oresegun, Peter Thorpe, Benavente, E, Campino, S, Fauzi Muh, Moon, RW, Clark, T and Cox-Singh, J
LSHTM Faculty/Department	Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology
Participating Institutions	London School of Hygiene & Tropical Medicine, London, United Kingdom, University of St. Andrews, St Andrews, Scotland