Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates

Damilola R. OresegunORCID logo; Peter Thorpe; Benavente, EORCID logo; Campino, SORCID logo; Fauzi Muh; Moon, RWORCID logo; Clark, TORCID logo and Cox-Singh, JORCID logo (2021). Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates. [Dataset]. Zenodo. https://doi.org/10.5281/zenodo.5598263
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Supporting data for the attached publication. De Novo assembled genomes of Plasmodium knowlesi generated using Nanopore long reads. Supporting statistical results are included. Variant call files from structural variant calls are attached for each genome. Additionally, statistical results from BUSCO, QUAST, Pomoxis and AGAT are included. Annotation files in GFF3 format including further analyses of these annotation files are attached. Scripts for post analysis are attached with scripts for data generation presented on Github repository: "Pknowlesi_denovo_genome_assembly"

Keywords

Plasmodium knowlesi; De novo genome assembly; Nanopore; Long read; SICAvar; KIR; multigene; Annotation

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