Replication Data for: Infection patterns of endemic human coronaviruses in rural households in coastal Kenya

Nyaguthii, DM; Otieno, GP

; Kombe, IK; Koech, D; Mutunga, M; Medley, GF

; Nokes, DJ and Munywoki, PK (2021). Replication Data for: Infection patterns of endemic human coronaviruses in rural households in coastal Kenya. [Dataset]. Harvard Dataverse. https://doi.org/10.7910/DVN/CPJ9B4

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This is a replication dataset for the manuscript "Infection patterns of endemic human coronaviruses in rural households in coastal Kenya" submitted to Wellcome Open Research journal. This dataset is part from a cohort study conducted in rural coastal Kenya between December 2009 and June 2020. The study recruited 47 households, each with an infant, containing 483 members. nasopharyngeal samples were taken from study participants every 3-4 days and screened for 3 hCoVs (OC43, NL63 and 229E) and several other respiratory viral pathogens using real-time polymerase chain reaction (RT-PCR).

Keywords

Medicine, Health and Life Sciences

Item Type	Dataset
Resource Type	Resource Type Resource Description Dataset Quantitative
Capture method	Unknown
Date	8 December 2021
Language(s) of written materials	English
Creator(s)	Nyaguthii, DM; Otieno, GP; Kombe, IK; Koech, D; Mutunga, M; Medley, GF ; Nokes, DJ and Munywoki, PK
LSHTM Faculty/Department	Faculty of Public Health and Policy > Dept of Global Health and Development
Research Centre	Centre for the Mathematical Modelling of Infectious Diseases
Participating Institutions	London School of Hygiene & Tropical Medicine, London, United Kingdom; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya; University of Warwick, Coventry, United Kingdom
Date Deposited	28 Oct 2021 08:46
Last Modified	16 Oct 2025 12:50
Publisher	Harvard Dataverse