Wamae, K, Ndwiga, L, Kharabora, O, Kimenyi, KM, Osoti, V, de Laurent, ZR, Wambua, J, Musyoki, J, Ngetsa, C, Kalume, P, Mwambingu, G, Hamaluba, M, van der Pluijm, RW, Dondorp, AM, Bailey, JA, Juliano, JJ, Bejon, P and Ochola-Oyier, LI. 2022. Targeted Amplicon deep sequencing of ama1 and mdr1 to track within-host P. falciparum diversity in Kilifi, KENYA. [Online]. Zenodo. Available from: https://doi.org/10.5281/zenodo.6243928
Wamae, K, Ndwiga, L, Kharabora, O, Kimenyi, KM, Osoti, V, de Laurent, ZR, Wambua, J, Musyoki, J, Ngetsa, C, Kalume, P, Mwambingu, G, Hamaluba, M, van der Pluijm, RW, Dondorp, AM, Bailey, JA, Juliano, JJ, Bejon, P and Ochola-Oyier, LI. Targeted Amplicon deep sequencing of ama1 and mdr1 to track within-host P. falciparum diversity in Kilifi, KENYA [Internet]. Zenodo; 2022. Available from: https://doi.org/10.5281/zenodo.6243928
Wamae, K, Ndwiga, L, Kharabora, O, Kimenyi, KM, Osoti, V, de Laurent, ZR, Wambua, J, Musyoki, J, Ngetsa, C, Kalume, P, Mwambingu, G, Hamaluba, M, van der Pluijm, RW, Dondorp, AM, Bailey, JA, Juliano, JJ, Bejon, P and Ochola-Oyier, LI (2022). Targeted Amplicon deep sequencing of ama1 and mdr1 to track within-host P. falciparum diversity in Kilifi, KENYA. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.6243928
Description
These data were generated from targeted amplicon sequencing of Plasmodium falciparum ama1 and mdr1 genes in samples collected from Kilifi, at the coast of Kenya.
Two objectives were explored:
[1] To determine temporal changes in the genetic diversity of malaria parasites in asymptomatic and febrile infections.
[2] To track within-host parasite diversity, throughout treatment in a clinical drug trial.
| Data capture method | Unknown |
|---|---|
| Date (Date published in a 3rd party system) | 23 February 2022 |
| Language(s) of written materials | English |
| Data Creators | Wamae, K, Ndwiga, L, Kharabora, O, Kimenyi, KM, Osoti, V, de Laurent, ZR, Wambua, J, Musyoki, J, Ngetsa, C, Kalume, P, Mwambingu, G, Hamaluba, M, van der Pluijm, RW, Dondorp, AM, Bailey, JA, Juliano, JJ, Bejon, P and Ochola-Oyier, LI |
|---|---|
| Associated roles | Ochola-Oyier, LI (Supervisor), Bejon, P (Supervisor) and Sutherland, CJ (Supervisor) |
| LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Dept of Immunology and Infection |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Date Deposited | 28 Feb 2022 11:55 |
|---|---|
| Last Modified | 28 Feb 2022 11:55 |
| Publisher | Zenodo |
