A

Abdurahman, O (2024). Data for: "Distribution and viability of ocular and non-ocular Chlamydia trachomatis in households in a trachoma-endemic community in Oromia, Ethiopia". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003869.

Abdurahman, O, Last, A, Macleod, D, Habtamu, E, Versteeg, B, Greenland, K, Burton, MJ, Dumessa, G, Guye, M, Nure, R, Adugna, D and Miecha, H (2023). Data for risk factor survey of active trachoma in the Oromia region of Ethiopia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003653.

Abotsi, RE, Nicol, MP, McHugh, G, Simms, V, Rehman, AM, Barthus, C, Ngwira, LG, Kwambana-Adams, B, Heyderman, RS, Odland, JØ, Ferrand, RA and Dube, FS (2021). Data from: The impact of long-term azithromycin on antibiotic resistance in HIV-associated chronic lung disease. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.5dv41ns71

Aghaji, A, Burchett, HED, Hameed, S and Gilbert, C (2022). Collection tools for: "Assessing the capacity of primary health care facilities in Nigeria to deliver eye health promotion: Results of a mixed-methods feasibility study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003208.

Amofa-Sekyi, M and Schaap, A (2023). Dataset for: "Prevalence and risk factors of M. Tuberculosis Infection in young people across 14 communities in Zambia and South Africa". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003627.

Ansah, E and Whitty, C (2015). Factors influencing choice of care seeking for acute fever comparing private chemical shops with health centres and hospitals in Ghana: A study using case-control methodology. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.36.

Anywaine, Z, Lule, SA, Hansen, C, Warimwe, G and Elliott, A (2021). Study investigating the clinical manifestations of Rift Valley fever in humans: Systematic review and meta-analysis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002178.

Armitage, E (2022). SpyCATS REDCap Data Dictionary. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7463051

Arora, NK, Nair, MKC, Gulati, S, Deshmukh, V, Mohapatra, A, Mishra, D, Patel, V, Pandey, RM, Das, BC, Divan, G, Murthy, GVS, Sharma, TD, Sapra, S, Aneja, S, Juneja, M, Reddy, SK, Suman, P, Mukherjee, SB, Dasgupta, R, Tudu, P, Das, MK, Bhutani, VK, Durkin, MS, Pinto-Martin, J, Silberberg, DH, Sagar, R, Ahmed, F, Babu, N, Bavdekar, S, Chandra, V, Chaudhuri, Z, Dada, T, Dass, R, Gourie-Devi, M, Remadevi, S, Gupta, JC, Handa, KK, Kalra, V, Karande, S, Konanki, R, Kulkarni, M, Kumar, R, Maria, A, Masoodi, MA, Mehta, M, Mohanty, SK, Nair, H, Natarajan, P, Niswade, AK, Prasad, A, Rai, SK, Russell, PSS, Saxena, R, Sharma, S, Singh, AK, Singh, GB, Sumaraj, L, Suresh, S, Thakar, A, Parthasarathy, S, Vyas, B, Panigrahi, A, Saroch, MK, Shukla, R, Rao, KVR, Silveira, MP, Singh, S and Vajaratkar, V (2018). Neurodevelopmental disorders in children aged 2–9 years: Population-based burden estimates across five regions in India. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1002615.s009

Arunga, S (2019). Traditional Eye Medicine use in Microbial Keratitis in Uganda. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/5GOPKZ

Arunga, S (2024). Uganda Pharmacy attendants KAP Survey dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004231.

Arunga, S (2019). The management of microbial keratitis within Uganda’s primary health system: a situational analysis. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/MSLAOS

Arunga, S (2019). The management of microbial keratitis within Uganda’s primary health system: a situational analysis. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/MSLAOS

Avan, B (2017). Community Base Newborn Care Evaluation, Ethiopia 2013-2017 - Woman's Development Army Survey Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Avan, B and Berhanu, D (2017). Community Base Newborn Care Evaluation, Ethiopia 2013-2017 - Contextual. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Avan, B and Berhanu, D (2017). Community Base Newborn Care Evaluation, Ethiopia 2013-2017 - Health Centre Survey Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001445.

Avan, B and Berhanu, D (2017). Community Base Newborn Care Evaluation, Ethiopia 2013-2017 - Health Post and Health Extension Work Survey Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Avan, B and Berhanu, D (2020). IDEAS Community Base Newborn Care Evaluation, Ethiopia 2013-2017. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001979.

B

Bah, SY, Forster, T, Dickinson, P, Kampmann, B and Ghazal, P (2018). Table 1 for "Meta-Analysis Identification of Highly Robust and Differential Immune-Metabolic Signatures of Systemic Host Response to Acute and Latent Tuberculosis in Children and Adults". [Data Collection]. Frontiers in Genetics. https://doi.org/10.3389/fgene.2018.00457.s002

Baiden, F, Fleck, S, Leigh, B, Ayieko, P, Tindanbil, D, Otieno, T, Lawal, B, Tehtor, M, Rogers, M, Odeny, L, Hodges, MH, Sonnie, M, Samai, M, Ishola, D, Lowe, B, Watson-jones, D and Greenwood, B (2022). Prevalence of malaria and helminth infections in rural communities in northern Sierra Leone, a baseline study to inform Ebola vaccine study protocols. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0270968.s001

Balami, AD, Said, SM, Zulkefli, NAM, Bachok, N and Audu, B (2019). MOESM2 of Effects of a health educational intervention on malaria knowledge, motivation, and behavioural skills: a randomized controlled trial. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.7750484.v1

Bandason, T, Dauya, E, Dakshina, S, McHugh, G, Chonzi, P, Munyati, S, Weiss, HA, Simms, V, Kranzer, K and Ferrand, RA (2018). Screening tool to identify adolescents living with HIV in a community setting in Zimbabwe: A validation study. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0204891.s001.

Banks, M (2019). Disability-inclusive social protection in Vietnam and Nepal data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Banks, M, Hameed, S and Kuper, H (2020). Impact of the Disability Allowance in the Maldives - Baseline Dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001698.

Bascaran, C, Mwangi, N, D’Esposito, F, Cleland, C, Gordon, I, Ulloa, JAL, Maswadi, R, Mdala, S, Ramke, J, Evans, JR and Burton, MJ (2021). Additional file 3 of Effectiveness of interventions to increase uptake and completion of treatment for diabetic retinopathy in low- and middle-income countries: a rapid review protocol. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13578790.v1

Bastawrous, A (2017). Peek: a retinal imaging smartphone app. [Data Collection]. Peek Vision Ltd. https://www.peekvision.org/

Beilinson, H, Yadavalli, A, Xiao, J, Corbett, L, Saribasak, H and Schatz, D (2021). The RAG1 N-terminal region regulates the efficiency and pathways of synapsis for V(D)J recombination. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE180734

Beilinson, HA, Glynn, RA, Yadavalli, AD, Xiao, J, Corbett, EL, Saribasak, H, Arya, R, Miot, C, Bhattacharyya, A, Jones, JM, Pongubala, JM, Bassing, CH and Schatz, DG (2021). The RAG1 N-terminal region regulates the efficiency and pathways of synapsis for V(D)J recombination. [Data Collection]. immunoSEQ Analyze. https://doi.org/10.21417/HAB2021JEM

Beiras, CG, Marks, M, Quintó, L, Gavilán, S, Kolmau, R, Ubals, M, Vall-Mayans, M and Mitjà, O (2022). Dataset of active ulcer cases included in the analysis. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010197.s001

Benavente, E, Coll, F, Furnham, N, Mcnerney, R, Glynn, J, Campino, S, Pain, A, Mohareb, FR and Clark, T (2015). PhyloTrack. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.82.

Boggs, D, Atijosan-Ayodele, O, Yonso, H, Scherer, N, O'Fallon, T, Deniz, G, Volkan, S, Örücü, A, Pivato, I, Beck, AH, Akıncı, İ, Kuper, H, Foster, A, Patterson, A and Polack, S (2021). Additional file 1 of Musculoskeletal impairment among Syrian refugees living in Sultanbeyli, Turkey: prevalence, cause, diagnosis and need for related services and assistive products. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14457117.v1

Bresser, M, Erhardt, R, Shanaube, K, Simwinga, M, Mahlatsi, P, Belus, J, Schaap, A, Amstutz, A, Gachie, T, Glass, T, Kangolo, B, Mota, M, Floyd, S, Katende, B, Klinkenberg, E, Ayles, H, Reither, K and Ruperez, M (2023). Evaluation of COVID-19 antigen rapid diagnostic tests for self-testing in Lesotho and Zambia - Lesotho data. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.8429840

Bresser, M, Erhardt,, R, Shanaube, K, Simwinga, M, Mahlatsi, P, Belus, J, Schaap, A, Amstutz, A, Gachie, T, Glass, T, Kangolo, B, Mota, M, Floyd, S, Katende, B, Klinkenberg, E, Ayles, H, Reither, K and Ruperez, M (2023). Evaluation of COVID-19 antigen rapid diagnostic tests for self-testing in Lesotho and Zambia - Zambia data. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.8426699

Bretscher, MT, Dahal, P, Griffin, JT, Stepniewska, K, Bassat, Q, Baudin, E, D'Alessandro, U, Djimde, AA, Dorsey, G, Espie, E, Fofana, B, Gonzalez, R, Juma, E, Karema, C, Lasry, E, Lell, B, Lima, N, Menendez, C, Mombo-Ngoma, G, Moreira, C, Nikiema, F, Ouedraogo, JB, Staedke, SG, Tinto, H, Valea, I, Yeka, A, Ghani, AC, Guerin, PJ and Okell, LC (2019). A pooled analysis of the duration of chemoprophylaxis against malaria after treatment with artesunate-amodiaquine and artemether-lumefantrine: data & analysis output. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3339214

Bright, T (2019). Data for: Rapid Assessment of Hearing Loss survey in Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001510.

Bright, T, Kuper, H, Macleod, D, Musendo, D, Irunga, P and Yip, JL (2018). Data from: Population need for primary eye care in Rwanda: a national survey. [Data Collection]. Dryad Digital Repository. https://doi.org/10.5061/dryad.p6qb650

Bright, T, Mulwafu, W, Thindwa, R, Zuurmond, M and Polack, S (2017). Data from: Reasons for low uptake of referrals to ear and hearing services for children in Malawi. [Data Collection]. Dryad Digital Repository. https://doi.org/10.5061/dryad.hc8k0

Burke, R (2024). Computer Aided Screening for Tuberculosis in Low Resource Environments (CASTLE) trial data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003552.

Burke, R (2024). HIV hospitalisation systematic review data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004347.

Burke, R (2021). rachaelmburke/hivhospital. [Data Collection]. Github. https://github.com/rachaelmburke/hivhospital

Burke, R (2022). rachaelmburke/tbacf. [Data Collection]. Github. https://github.com/rachaelmburke/tbacf

Burke, R (2021). rachaelmburke/tbcovidblantyre. [Data Collection]. Github. https://github.com/rachaelmburke/tbcovidblantyre

Burkhart Colorado, AS, Lazzaro, A, Preston, C, Nusbacher, N, Boyd, K, Fiorillo, S, Martin, C, Siebert, J and Campbell, T (2023). Differential effects of antiretroviral treatment on immunity and gut microbiome composition in people living with HIV in rural versus urban Zimbabwe. [Data Collection]. Zenodo. https://zenodo.org/records/8346401

Burr, SE, Camara, B, Oluwalana, C, Bojang, E, Bottomley, C, Bojang, A, Bailey, RL, D'Alessandro, U and Roca, A (2017). Data for: "Does azithromycin given to women in labour decrease ocular bacterial infection in neonates? A double-blind, randomized trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000626.

Burton, MJ, Hu, V, Bauer, J, Mabey, D, Holland, MJ and Bailey, RL (2011). The conjunctival transcriptome in scarring trachoma for Tanzanians. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE24383

Butcher, R (2018). Data for: "Clinical signs of trachoma are prevalent among Solomon Islanders who have no persistent markers of prior infection with Chlamydia trachomatis". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000795.

Butcher, RMR, Mccormick, I and RAAB Team (2022). raabteam/raab7-analysis. [Data Collection]. Github. https://github.com/raabteam/raab7-analysis

Butcher, RMR, Sokana, O, Jack, K, Macleod, CK, Marks, ME, Kalae, E, Sui, L, Russell, C, Tutill, HJ, Williams, RJ, Breuer, J, Willis, R, Le Mesurier, RT, Mabey, DCW, Solomon, AW and Roberts, Ch (2016). Data for: Low Prevalence of Conjunctival Infection with Chlamydia trachomatis in a Treatment-Naïve Trachoma-Endemic Region of the Solomon Islands. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0004863.s004

C

Calderwood, C (2024). ERASE-TB: cross-sectional HIV, malnutrition and non-communicable diseases dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004266.

Calderwood, C (2024). Multimorbidity in tuberculosis-affected households: evaluation of disease clustering and the acceptability and yield of integrated health screening in East and Southern Africa (IMBA Hutano). [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004267.

Chaila, MJ, Mcleod, D, Vermund, SH, Mbolongwe-Thornicroft, M, Mbewe, M, Mubekapi-Musadaidzwa, C, Harper, A, Schaap, A, Floyd, S, Hoddinott, G, Hayes, R, Fidler, S, Ayles, H and Shanaube, K (2024). Assessment of a screening tool to aid home-based identification of adolescents (aged 10–14) living with HIV in Zambia and South Africa: HPTN 071 (PopART) study. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0266573.s001

Chandler, C, Webb, EL, Maiteki-Sebuguzi, C, Nayiga, S, Nabirye, C, Diliberto, D, Ssemmondo, E, Dorsey, G, Kamya, MR and Staedke, SG (2017). The impact of an intervention to introduce malaria rapid diagnostic tests on fever case management in a high transmission setting in Uganda: A mixed-methods cluster-randomized trial (PRIME). [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0170998.

Chandler, DJ, Galván-Casas, C, Mitjá, O, Esteban, S, Kafulafula, J, Phiri, T, Navarro-Fernández, Íñigo, Román-Curto, C, Mtenje, H, Thauzeni, G, Harawa, E, Kaluzi, S, Diere, M, Mkandawire, M, Malizani, S, Chifundo, A, Utrera-Busquets, M, Roncero-Riesco, M, López Martín-Prieto, S, Vilanova-Urdániz, I, Petiti, GH, de Gálvez Aranda, MV, No Pérez, N, Rueda Gómez-Calcerrada, M, Iranzo, P, Escalonilla García-Patos, P, de Troya-Martín, M, Romero Gomez, J, Cardeñoso-Alvarez, E, Lucas Truyols, S, Aspe Unanue, L, Bajo del Pozo, C, Comunión Artieda, A, Martínez González, MI, López-López, OF, Moreno-Artero, E, Cubiró, X, Meilán-Sánchez, I, Tomás-Velázquez, A, López-Sánchez, C, Sánchez-Martínez, EM, Edwards, HA, Herrera Morueco, M, Zehe Rubiera, J, Salguero Caldera, L, Blanes-Moreno, U, Uribarren-Movilla, M and Marks, M (2021). Patients attended: Scabies, Impetigo and demographic data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009386.s001

Chandna, A, White, L, Pongvongsa, T, Mayxay, M, Newton, P, Day, N and Lubell, Y (2018). YLubell/SEA-CTN: surveillance-poct. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.2206940

Chidambaram, JD, Kannambath, S, Srikanthi, P, Shah, M, Lalitha, P, Elakkiya, S, Bauer, J, Prajna, NV, Holland, MJ and Burton, MJ (2017). Persistence of Innate Immune Pathways in Late Stage Human Bacterial and Fungal Keratitis: Results from a Comparative Transcriptome Analysis. [Data Collection]. Frontiers in Cellular and Infection Microbiology. http://journal.frontiersin.org/article/10.3389/fcimb.2017.00193/full#supplementary-material

Choko, A and Corbett, EL (2023). Baseline data for the fishermen’s schistosomiasis and HIV services (FISH) cluster randomized trial in Mangochi, Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003363.

Choko, A, Corbett, E and Fielding, K (2018). Baseline and primary data for the partner-provided HIV self-testing and linkage (PASTAL) adaptive multi-arm multi-stage cluster randomized trial in Blantyre, Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000923.

Choko, A, Webb, E and Corbett, E (2016). Initial Accuracy of HIV Rapid Test Kits Stored in Suboptimal Conditions and Validity of Delayed Reading of Oral Fluid Tests. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.105.

Choko, A, Webb, E and Corbett, L (2015). Uptake, accuracy, safety and linkage into care over two years of promoting annual self-testing for HIV in Blantyre, Malawi: a community-based prospective study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.7.

Coll, F, Mcnerney, R, Guerra-Assunção, JA, Glynn, JR, Perdigão, J, Viveiros, M, Portugal, I, Pain, A, Martin, N and Clark, TG (2014). Data for: "A robust SNP barcode for typing Mycobacterium tuberculosis complex strains". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000414.

Coll, F, Mcnerney, R, Preston, MD, Guerra-assunção, JA, Warry, A, Hill-Cawthorne, G, Mallard, K, Nair, M, Miranda, A, Alves, A, Perdigão, J, Viveiros, M, Portugal, I, Hasan, Z, Hasan, R, Glynn, J, Martin, N, Pain, A and Clark, T (2015). TB Profiler. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. http://tbdr.lshtm.ac.uk/

Collinson, S, Timothy, J, Zayzay, SK, Kollie, KK, Lebas, E, Candy, N, Halliday, KE, Pullan, RL, Fallah, M, Walker, SL and Marks, M (2020). The prevalence of scabies in Monrovia, Liberia: A population-based survey. Study Dataset. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0008943.s001

Colvin, C, Swartz, A, Kallon, I, Kielmann, K and Macgregor, H (2022). Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research Question 1 - describe IPC policy and systems context. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.16438842.v1

Colvin, C, Swartz, A, Kallon, I, Kielmann, K and Macgregor, H (2022). Umoya omuhle: Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research Questions 3 and 4_KwaZulu Natal. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.14873202.v1

Coulibaly, A, Diop, MF, Kone, A, Dara, A, Ouattara, A, Mulder, N, Miotto, O, Diakite, M, Djimde, A and Amambua-Ngwa, A (2022). Table1_Genome-wide SNP analysis of Plasmodium falciparum shows differentiation at drug-resistance-associated loci among malaria transmission settings in southern Mali. [Data Collection]. Frontiers. https://doi.org/10.3389/fgene.2022.943445.s002

Cresswell, F and Quinn, C (2021). Neurocognitive outcomes of HIV-associated tuberculous meningitis dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002372.

Cunningham-Oakes, E, Bronowski, C, Chinyama, E, Jere, KC, Sindhu, KNC, Kang, G, Iturriza-Gómara, M, Darby, AC and Parker, EPK (2023). Increased bacterial taxonomic and functional diversity is associated with impaired rotavirus vaccine immunogenicity in infants from India and Malawi. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.6937780.v1

Czerniewska, A (2019). Dataset for behaviour-microbiology studies of face washing techniques for trachoma control: a pilot study within the Stronger SAFE project. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001341.

D

Dahiru Balami, A, Said, SM, Zulkefli, NAM, Norsa’adah, B and Audu, B (2021). Additional file 1 of Improving malaria preventive practices and pregnancy outcomes through a health education intervention: A randomized controlled trial. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13627127.v1

Daynes, E, Baldwin, M, Greening, NJ, Yates, T, Bishop, NC, Mills, G, Roberts, M, Hamrouni, M, Plekhanova, T, Vogiatzis, I, Echevarria, C, Nathu, R, McAuley, HJC, Latimer, L, Glennie, J, Chambers, F, Penfold, R, Hume, E, Megaritis, D, Alexiou, C, Potthoff, S, Hogg, MJ, Haighton, C, Nichol, B, Leavy, OC, Richardson, M, Elneima, O, Singapuri, A, Sereno, M, Saunders, RM, Harris, VC, Nolan, CM, Bolton, C, Houchen-Wolloff, L, Harrison, EM, Lone, N, Quint, J, Chalmers, JD, Ho, L, Horsley, A, Marks, M, Poinasamy, K, Ramen, B, Wain, LV, Brightling, C, Man, WD, Evans, R and Singh, SJ (2023). Supplementary information files for The effect of COVID rehabilitation for ongoing symptoms post hospitalisation with COVID-19 (PHOSP-R): protocol for a randomised parallel group controlled trial on behalf of the PHOSP consortium. [Data Collection]. Loughborough University. https://doi.org/10.17028/rd.lboro.22189279.v1

De Barros, B, Pierce, R, Sprenger, C, Ong, ELH and Walker, SL (2023). COVID-19 vaccination and leprosy–A UK hospital-based retrospective cohort study. Database. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011493.s001

Dean, W (2019). Survey of Ophthalmologists-in-Training in Eastern, Central and Southern Africa - Survey data and questionnaire. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001464.

Der, J, Grint, D, Narh, CT, Bonsu, F and Grant, AD (2019). Data for "Where are patients missed in the tuberculosis diagnostic cascade? A prospective cohort study in Ghana". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001529.

Derrick, T (2019). Longitudinal gene expression dataset [The immuno-pathogenesis of progressive scarring trachoma: results of a four-year longitudinal study in Tanzanian children]. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.11401158.v1

Derrick, T, Last, AR, Burr, SE, Roberts, Ch, Nabicassa, M, Cassama, E, Bailey, RL, Mabey, DCW, Burton, MJ and Holland, MJ (2016). Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE69837

Derrick, T, Roberts, Ch, Rajasekhar, M, Burr, SE, Joof, H, Makalo, P, Bailey, RL, Mabey, DCW, Burton, MJ and Holland, MJ (2013). Conjunctival miRNA expression data in scarring and inflammatory trachoma. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE37717

Desmond, N, Nagelkerke, N, Lora, W, Chipeta, E, Sambo, M, Kumwenda, M, Corbett, EL, Taegtemeyer, M, Seeley, J, Lalloo, DG and Theobald, S (2018). Additional file 1: of Measuring sexual behaviour in Malawi: a triangulation of three data collection instruments. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.6721838.v1

Dewez, JE and Yeung, S (2022). Data for: “Adoption of C-reactive protein rapid tests in primary care in the Netherlands and England: a comparative health systems analysis”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002758.

Dewez, M and Yeung, S (2022). Data for: "Availability and use of rapid diagnostic tests for the management of acute childhood infections in Europe". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003104.

Dhalla, K, Cousens, S, Bowman, R, Wood, M and Murdoch, I (2016). Is Beta Radiation Better than 5 Flurouracil as an Adjunct for Trabeculectomy Surgery When Combined with Cataract Surgery? A Randomised Controlled Trial. [Data Collection]. PLOS One. https://journals.plos.org/plosone/10.1371/journal.pone.0161674.s001

Dodd, PJ, Looker, C, Plumb, ID, Bond, V, Schaap, A, Shanaube, K, Muyoyeta, M, Vynnycky, E, Godfrey-faussett, P, Corbett, EL, Beyers, N, Ayles, H and White, RG (2019). Social contact data for Zambia and South Africa (CODA dataset). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.2548692

Dodd, PJ, Looker, C, Plumb, ID, Bond, V, Schaap, A, Shanaube, K, Muyoyeta, M, Vynnycky, E, Godfrey-faussett, P, Corbett, E, Beyers, N, Ayles, H and White, R (2015). Age- and Sex-Specific Social Contact Patterns and Incidence of Mycobacterium tuberculosis Infection: Interview Questionnaire. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.35.

Doyle, RM, Rubio, M, Dixon, G, Hartley, J, Klein, N, Coll, P and Harris, KA (2019). Cross-transmission is not the source of new Mycobacterium abscessus infections in a multi-centre cohort of cystic fibrosis patients. [Data Collection]. Clinical Infectious Diseases. https://doi.org/10.1101/582684 https://doi.org/10.1093/cid/ciz526

Dziva Chikwari, C (2020). Bridging the Gap in HIV testing and care for children in Zimbabwe (B-GAP). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001798.

Dziva Chikwari, C (2022). Community based interventions to improve HIV outcomes in youth: a cluster randomised trial in Zimbabwe (CHIEDZA). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002718.

E

Ellis, J (2020). WOR CM co-infections data file.xlsx. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13295858.v1

Ellis, JP, Gaskell, K, Peirse, M, Gormley, J, Kalata, N, Burgess, PI, Mopamboli, P, Manda, CA, Kiire, CA, Maccormick, I, Gondwe, E, Molloy, SF, Harrison, TS, Lalloo, DG and Heyderman, RS (2019). Ophthalmic features and clinical data of HIV-infected Malawian adults with and without cryptococcal meningitis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.8082275.v1

Enria, L, Waterlow, N, Rogers, N, Brindle, H, Lal, S, Eggo, RM, Lees, S and Roberts, C (2020). Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001860.

Enria, L, Waterlow, N, Rogers, N, Brindle, H, Lal, S, Eggo, RM, Lees, S and Roberts, C (2020). Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK - Qualitative Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001859.

Enria, L, Waterlow, N, Rogers, N, Brindle, H, Lal, S, Eggo, RM, Lees, S and Roberts, C (2021). Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK - Quantitative Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002015.

F

Fabian, ID, Stacey, A, Foster, A, Kivelä, TT, Munier, F, Cassoux, N and Bowman, R (2020). Global Retinoblastoma Presentation 2017 data, on behalf of the Global Retinoblastoma Study Group. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.3727687

Falconer, J (2020). Search strategies to investigate STI testing amongst PrEP users. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001989.

Falconer, J (2022). Search strategy for the systematic review informing recommendations 6 & 7 of the WHO Guideline 'Responding to children and adolescents who have been sexually abused'. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001023.

Falconer, J and Parajuli, A (2018). Draft search strategies for: "Novel strategies and approaches for testing populations at risk for sexually transmitted infections: A systematic review protocol". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001047.

Feasey, H (2022). SCALE prevalence survey. [Data Collection]. Open Science Framework. https://osf.io/eu2xf/

Fielding, K (2019). TB Fast Track dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001531.

Floyd, S, Ayles, H, Schaap, A, Shanaube, K, MacLeod, D, Phiri, M, Griffith, S, Bock, P, Beyers, N, Fidler, S and Hayes, R (2018). Aggregate data for "Towards 90-90: Findings after two years of the HPTN 071 (PopART) cluster-randomized trial of a universal testing-and-treatment intervention in Zambia". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0197904.s005

Floyd, S, Schaap, A, Hensen, B and Mulubwa, C (2018). Dataset for: "Community based distribution of oral HIV self-testing kits in Zambia: a cluster-randomised trial nested in four HPTN 071 (PopART) intervention communities". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000980.

Foster, N, Hanifa, Y, Pillai, N, Roycent, T, Fielding, K, Vassall, A and Grant, AD (2018). XPHACTOR cross-sectional patient cost dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000791.

Francis, SC, Hou, Y, Baisley, K, Van de wijgert, J, Watson-Jones, D, Ao, TT, Herrera, C, Maganja, K, Andreasen, A, Coulton, GR, Hayes, RJ and Shattock, RJ (2015). Data for: "Immune activation in the female genital tract: Expression profiles of soluble proteins in women at high risk for HIV infection". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.104.

Fu, G, Huon, C, Marley, G, Tan, RKJ, Wu, D, Sheng, Q, Liu, Y, Byrne, ME, Tang, Q, Mu, R, Wang, C, Yang, L, Wang, T, Tang, W and Tucker, JD (2024). S1 Dataset for "Sociodemographic characteristics, community engagement and stigma among Men who have Sex with Men (MSM) who attend MSM-led versus public sexual health clinics: A cross-sectional survey in China". [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0310957.s003

Funk, S, White, R and Edmunds, WJ (2019). Social Contacts Data. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. http://www.socialcontactdata.org/

G

Gaskell, KM, El kheir, N, Mirfendesky, M, Rampling, T, Marks, M, Houlihan, CF, Lemonge, N, Bristowe, H, Aslam, S, Kyprianou, D, Nastouli, E, Goldblatt, D, Fielding, K and Moore, DAJ (2023). S1 Data for: "Comparison of new and emerging SARS-CoV-2 variant transmissibility through active contact testing. A comparative cross-sectional household seroprevalence study". [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0284372.s003

Gaskell, KM, Johnson, M, Gould, V, Hunt, A, Stone, NR, Waites, W, Kasstan, B, Chantler, T, Lal, S, Roberts, Ch, Goldblatt, D, Eggo, RM and Marks, M (2021). Extremely high SARS-CoV-2 seroprevalence in a strictly-Orthodox Jewish community in the UK. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002084.

Ghinai, R, El-Duah, P, Chi, K, Pillay, A, Solomon, AW, Bailey, R, Agana, N, Mabey, D, Chen, C, Adu-Sarkodie, Y and Marks, M (2015). A Cross-Sectional Study of ‘Yaws’ in Districts of Ghana Which Have Previously Undertaken Azithromycin Mass Drug Administration for Trachoma Control. Study dataset. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0003496.s002

Gibbs, H (2023). hamishgibbs/ghana_cdr_aggregation. [Data Collection]. Github. https://github.com/hamishgibbs/ghana_cdr_aggregation

Gibbs, H (2021). hamishgibbs/ghana_rt_npi_mobility. [Data Collection]. Github. https://github.com/hamishgibbs/ghana_rt_npi_mobility

Glynn, JR, Bower, H, Houlihan, C, Oza, S, Checchi, F, Johnson, S, Turay, C, Sesay, D, Mansaray, SH, Kamara, O, Kamara, JA, Bangura, MS, Montesano, C, Dicks, S, Samuel, D, Tedder, R and Sebba, C (2017). Asymptomatic infection and family contact patterns in households of Ebola Virus Disease survivors, Sierra Leone 2015. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.41.

Govender, I (2022). Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care:a whole systems approach. [Data Collection]. AHRI Data Repository. https://doi.org/10.23664/AHRI.UmoyaOmuhle.Datasets

Graham, S (2023). grahams99/Health-seeking-behaviour. [Data Collection]. Github. https://github.com/grahams99/Health-seeking-behaviour

Graham, S, McDonald, H and Parker, E (2023). Codelists for: “Identifying and quantifying confounding from health-seeking behaviour and healthcare access in observational research using UK electronic healthcare records”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003684.

Grandjean, L, Gilman, RH, Martin, L, Soto, E, Castro, B, Lopez, S, Coronel, J, Castillo, E, Alarcon, V, Lopez, V, San Miguel, A, Quispe, N, Asencios, L, Dye, C and Moore, D (2015). Data from: Transmission of multidrug-resistant and drug-susceptible tuberculosis within households: a prospective cohort study. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.br760

Grant, AD, Baisley, K, Mzembe, T and Edwards, A (2019). Incidence of tuberculosis infection among adolescents in rural KwaZulu-Natal, South Africa, 2017-2018. [Data Collection]. AHRI Data Repository. https://data.ahri.org/index.php/catalog/912/

Grant, AD and Kielmann, K (2022). Qualitative and Quantitative Data for Tuberculosis Infection Prevention and Control in KwaZulu-Natal and Western Cape, South Africa, 2018-2021. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-854435

Grant, AD, Wong, E, Leslie, A, Karat, A, Fentress, M, Maharaj, P and Henwood, P (2022). Evaluation of ultrasound for screening and diagnosis of pulmonary tuberculosis, KwaZulu Natal, South Africa, 2019-20. [Data Collection]. Africa Health Research Institute. https://doi.org/10.23664/AHRI.POCUS.ANALYTICALDATASET.2022.V1

Grant, A and Kielmann, K (2022). Qualitative and quantitative data for tuberculosis Infection prevention and control in South Africa (KwaZulu-Natal and Western Cape). [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom, South Africa. https://doi.org/10.17037/DATA.00002919.

Grant-McAuley, W, Klock, E, Laeyendecker, O, Piwowar-Manning, E, Wilson, E, Clarke, W, Breaud, A, Moore, A, Ayles, H, Kosloff, B, Shanaube, K, Bock, P, Mandla, N, van Deventer, A, Fidler, S, Donnell, D, Hayes, R and Eshleman, SH (2021). Evaluation of multi-assay algorithms for identifying individuals with recent HIV infection: HPTN 071 (PopART). Minimum dataset, seroconverters. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0258644.s004

Gupta-Wright, A (2019). Mortality predictor score in hospitalised patients HIV-associated TB in Africa dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001026.

Gupta-Wright, A (2020). Virological failure, HIV-1 drug resistance, and early mortality in adults admitted to hospital in Malawi: an observational cohort study data set. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001824.

Guzman, FD, Iwamoto, Y, Saito, N, Salva, EP, Dimaano, EM, Nishizono, A, Suzuki, M, Oloko, O, Ariyoshi, K, Smith, C, Parry, CM and Solante, RM (2022). Clinical, epidemiological, and spatial features of human rabies cases in Metro Manila, the Philippines from 2006 to 2015. Study data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010595.s004

H

Hameed, W and Avan, BI (2019). Data from: Women's experiences of mistreatment during childbirth: a comparative view of home- and facility-based births in Pakistan. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.db35344

Handireketi, N, Timire, C, Shewade, HD, Munemo, E, Nyagupe, C, Chipuka, S, Sisya, L, Dhitima, E and Harries, AD (2019). Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0223597.s003

Hanifa, Y, Fielding, K, Chihota, VN, Adonis, L, Charalambous, S, Karstaedt, A, McCarthy, K, Nicol, MP, Ndlovu, NT, Sahid, F, Churchyard, G and Grant, AD (2016). Diagnostic Accuracy of Lateral Flow Urine LAM Assay for TB Screening of Adults with Advanced Immunosuppression Attending Routine HIV Care in South Africa. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0156866.

Hanifa, Y, Fielding, K, Grant, AD and Churchyard, GJ (2016). Data for: "The utility of repeat Xpert MTB/RIF testing to diagnose tuberculosis in HIV-positive adults with initial negative result". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.284.

Hanifa, Y, Fielding, K, Grant, AD and Churchyard, GJ (2016). XPHACTOR Clinical Score dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.204.

Hanifa, Y, Telisinghe, L, Fielding, KL, Malden, JL, Churchyard, GJ, Grant, AD and Charalambous, S (2015). The diagnostic accuracy of urine lipoarabinomannan test for tuberculosis screening in a South African correctional facility. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.1399199.v1

Hanron, AE, Billman, ZP, Seilie, AM, Olsen, TM, Fishbaugher, M, Chang, M, Rueckle, T, Andenmatten, N, Greenhouse, B, Arinaitwe, E, Rek, J, Das, S, Domingo, GJ, Shipman, K, Kappe, SH, Kublin, JG and Murphy, SC (2017). Multiplex, DNase-free one-step reverse transcription PCR for Plasmodium 18S rRNA and spliced gametocyte-specific mRNAs. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3784184

Hayes, R, Floyd, S, Schaap, A, Shanaube, K, Bock, P, Sabapathy, K, Griffith, S, Donnell, D, Piwowar-Manning, E, El-Sadr, W, Beyers, N, Ayles, H and Fidler, S (2017). A universal testing and treatment intervention to improve HIV control: One-year results from intervention communities in Zambia in the HPTN 071 (PopART) cluster-randomised trial. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pmed.1002292.

Head, MG, Fitchett, J, Derrick, G, Wurie, FB, Meldrum, J, Kumari, N, Beattie, B, Counts, CJ and Atun, R (2015). Additional file 1: of Comparing research investment to United Kingdom institutions and published outputs for tuberculosis, HIV and malaria: a systematic analysis across 1997–2013. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3626534_D1.v1

Head, MG, Fitchett, J, Nageshwaran, V, Kumari, N, Hayward, A and Atun, R (2016). Research Investments in Global Health: A Systematic Analysis of UK Infectious Disease Research Funding and Global Health Metrics, 1997–2013. [Data Collection]. EBioMedicine. https://doi.org/10.1016/j.ebiom.2015.12.016.

Hensen, B, Ayles, H, Mulubwa, C, Floyd, S, Schaap, A, Chiti, B, Phiri, M, Mwenge, L, Simwinga, M, Fidler, S, Hayes, R, Bond, V and Mwinga, A (2019). Community-based distribution of oral HIV self-testing kits: experimental evidence from Zambia. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NGY29G

Hensen, B, Phiri, MM, Sigande, L, Schaap, A, Simuyaba, M, Zulu-Phiri, R, Mwape, L, Floyd, S, Fidler, S, Hayes, R, Simwinga, M and Ayles, H (2024). Cross sectional survey data for self-reported ever and recent (last 12 months) STI testing. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003742.

Herrmann, Y, Lainati, F, del Mar Castro, M, Mwamba, C, Kumwenda, M, Muyoyeta, M, Broger, T, Heinrich, N, Olbrich, L, Corbett, EL, McMahon, S, Engel, N and Denkinger, C (2022). User perspectives and preferences on a novel TB LAM diagnostic (Fujifilm SILVAMP TB LAM) – a qualitative study in Malawi and Zambia [data]. [Data Collection]. heiDATA. https://doi.org/10.11588/data/PLRQCZ

Holland, MJ, Natividad, A, Mabey, DC, Jeffries, D, Burton, MJ, Bailey, RL and Freeman, TC (2011). Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20436/

Holland, MJ, Natividad, A, Mabey, D, Jeffries, D, Burton, MJ and Bailey, RL (2011). Expression data from Gambian children with and without the clinical signs of active trachoma: HG-focus array. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20430/

Homolka, S, Zallet, J, Albert, H, Witt, A and Kranzer, K (2019). Microscopy and contamination rates. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.9882935.v1

Horton, KC, Dueger, EL, Kandeel, A, Abdallat, M, El-Kholy, A, Al-Awaidy, S, Kohlani, AH, Amer, H, El-Khal, AL, Said, M, House, B, Pimentel, G and Talaat, M (2017). S1 Dataset for "Viral etiology, seasonality and severity of hospitalized patients with severe acute respiratory infections in the Eastern Mediterranean Region, 2007–2014". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0180954.s002

Horton, KC, Sumner, T, Houben, Rein M G J, Corbett, EL and White, RG (2018). A Bayesian approach to understanding gender differences in tuberculosis disease burden. [Data Collection]. American Journal of Epidemiology. https://doi.org/10.1093/aje/kwy131

Houghton, J (2022). F6 M. tb knock out mutant Vs wildtype after 24hrs starvation in PBS Tyloxapol. [Data Collection]. Biostudies. https://www.ebi.ac.uk/biostudies/arrayexpress/studies/E-MTAB-9327

Houlihan, C, Baisley, K, Bravo, IG, Kapiga, S, de Sanjosé, S, Changalucha, J, Ross, D, Hayes, R and Watson-jones, D (2015). The Incidence of Human Papillomavirus in Tanzanian Adolescent Girls Before Reported Sexual Debut. [Data Collection]. The Journal of adolescent health. https://doi.org/10.1016/j.jadohealth.2015.10.248.

Hoyt, J, Hill, J, Achieng, F, Ouma, P, Kariuki, S, Desai, M and Webster, J (2021). Additional file 1 of Healthcare provider and pregnant women’s perspectives on the implementation of intermittent screening and treatment with dihydroartemisinin–piperaquine for malaria in pregnancy in western Kenya: a qualitative study. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14880473.v1

Hutchins, H, Power, G, Ant, T, Teixeira da Silva, E, Goncalves, A, Rodrigues, A, Logan, J, Mabey, D and Last, AR (2020). Survey data on knowledge, attitudes and practices regarding Malaria and bed net usage on Bubaque Island, Guinea-Bissau. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001849.

I

International Centre for Eye Health (2023). Rapid Assessment of Avoidable Blindness Study Protocol Template. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/PUBS.00003744.

J

Jarju, S, Senghore, E, Brotherton, H, Saidykhan, A, Jallow, S, Krubally, E, Sinjanka, E, Ndene, MN, Bajo, F, Sanyang, MM, Saidy, B, Bah, A, Mohammed, NI, Forrest, K, Clarke, E, Dalessandro, U, Sesay, AK, Usuf, E, Cerami, C, Roca, A, Kampmann, B and De silva, T (2022). Circulation of respiratory viruses during the COVID-19 pandemic in the Gambia. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/TSF78

K

Kadia, BM, Dimala, CA, Fongwen, NT and Smith, AD (2021). Additional file 1 of Barriers to and enablers of uptake of antiretroviral therapy in integrated HIV and tuberculosis treatment programmes in sub-Saharan Africa: a systematic review and meta-analysis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17030642.v1

Karat, AS, Omar, T, von Gottberg, A, Tlali, M, Chihota, VN, Churchyard, GJ, Fielding, KL, Johnson, S, Martinson, NA, McCarthy, K, Wolter, N, Wong, EB, Charalambous, S and Grant, AD (2016). Autopsy Prevalence of Tuberculosis and Other Potentially Treatable Infections among Adults with Advanced HIV Enrolled in Out-Patient Care in South Africa: Lesedi Kamoso study data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.122.

Karat, A, Tlali, M, Fielding, K, Charalambous, S, Chihota, VN, Churchyard, GJ, Hanifa, Y, Johnson, S, McCarthy, K, Martinson, NA, Omar, T, Kahn, K, Chandramohan, D and Grant, AD (2016). Measuring mortality due to HIV-associated tuberculosis among adults in South Africa: comparing verbal autopsy, minimally-invasive autopsy, and research data. Data from the Lesedi Kamoso study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.169.

Kaswaswa, K, MacPherson, P, Kumwenda, M, Mpunga, J, Thindwa, D, Nliwasa, M, Mwapasa, M, Odland, J, Tomoka, T, Chipungu, G, Mukaka, M and Corbett, EL (2022). Effect of patient-delivered household contact tracing and prevention for tuberculosis: A household cluster-randomised trial in Malawi. Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.1371/journal.pone.0269219.s002

Kazembe, L, Watts, P, Phillips, G, Petticrew, M, Hayes, R, Bottomley, C, Yu, G, Schmidt, E, Tobi, P, Moore, D, Frostick, C, Lock, K and Renton, A (2013). Physical Activity in Deprived Communities in London: Examining Individual and Neighbourhood-Level Factors. [Data Collection]. PLoS One. https://doi.org/10.1371/journal.pone.0069472

Keay, L, Ren, K, Nguyen, H, Vajdic, C, Odutola, M, Gyawali, R, Toomey, M, Peters, R, Ee, N, Dillon, L, Hackett, M, Ah Tong, B, D'Esposito, F, Faulmann, D, Burton, MJ, Ramke, J and Jalbert, I (2022). Supporting data for: Risk factors common to leading eye health conditions and major non-communicable diseases: A rapid review and commentary. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.gxd2547q0

Kelly, H, Weiss, H, Benavente Moreno, Y, de Sanjose, S and Mayaud, P (2017). Antiretroviral therapy, high-risk human papillomavirus and cervical intraepithelial neoplasia: a systematic review and meta-analysis. [Data Collection]. Mendeley Data. http://dx.doi.org/10.17632/cg8k3d7rc8.1

Kelly-Hope, LA, Sanders, AM, Harding-Esch, E, Willems, J, Ahmed, F, Vincer, F and Hill, R (2021). Additional file 2 of Complex emergencies and the control and elimination of neglected tropical diseases in Africa: developing a practical approach for implementing safe and effective mapping and intervention strategies. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14355436.v1

Kelly-Hope, LA, Sanders, AM, Harding-Esch, E, Willems, J, Ahmed, F, Vincer, F and Hill, R (2021). Additional file 3 of Complex emergencies and the control and elimination of neglected tropical diseases in Africa: developing a practical approach for implementing safe and effective mapping and intervention strategies. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14355439.v1

Kerac, M, Monga, M, Sikorski, C, Mcgrath, M and de silva, H (2023). Identifying underweight in infants and children: the novel “MAMI” slide chart (evaluating performance against traditional diagnostic methods, lookup tables and growth charts). [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003535.

Kerac, M, Monga, M, Sikorski, C, de silva, H and Mcgrath, M (2023). Study data for “Identifying underweight in infants and children using growth charts, lookup tables and a novel “MAMI” slide chart: a cross-over diagnostic and acceptability study”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003513.

Kerkhoff, AD, Lawn, S, Schutz, C, Burton, R, Boulle, A, Cobelens, FJ and Meintjes, G (2015). Data for: "Anemia, Blood Transfusion Requirements and Mortality Risk in Human Immunodeficiency Virus-Infected Adults Requiring Acute Medical Admission to Hospital in South Africa". [Data Collection]. Oxford University Press. https://doi.org/10.1093/ofid/ofv173

Kheang, ST, Ridley, R, Ngeth, E, Ir, P, Pengby, N, Sovannaroth, S, Lek, D, Phon, S, Kak, N and Yeung, S (2022). Feasibility and acceptability of G6PD testing and radical cure for Plasmodium vivax in Cambodia: the VIGTARC study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002333.

Kranzer, K (2023). Data for: "Comprehensive occupational health services for healthcare workers in Zimbabwe during the SARS-CoV-2 pandemic". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003679.

Ku, C, MacPherson, P, Khundi, M, Nzawa Soko, RH, Feasey, HRA, Nliwasa, M, Horton, KC, Corbett, EL and Dodd, PJ (2021). Durations of asymptomatic, symptomatic, and care-seeking phases of tuberculosis disease with a Bayesian analysis of prevalence survey and notification data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002633.

Kumar, N, Corpus, I, Hans, M, Harle, N, Yang, N, McDonald, C, Sakai, SN, Janmohamed, K, Chen, K, Altice, FL, Tang, W, Schwartz, JL, Jones-Jang, SM, Saha, K, Memon, SA, Bauch, CT, Choudhury, MD, Papakyriakopoulos, O, Tucker, JD, Goyal, A, Tyagi, A, Khoshnood, K and Omer, S (2022). COVID-19 Vaccine Perceptions on Reddit. [Data Collection]. OSF. https://osf.io/urp2a/

Kuper, H (2021). Social and Economic Impact of Congenital Zika Syndrome questionnaire. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/XJEP7

Kwizera, R, Cresswell, FV, Mugumya, G, Okirwoth, M, Kagimu, E, Bangdiwala, AS, Williams, DA, Rhein, J, Boulware, DR and Meya, DB (2019). CSFLAM_data set revised. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.9415853.v1

L

Lambert, S (2023). Prospective observational cohort study of cutaneous leishmaniasis in Ethiopia - Informed consent form. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003618.

Lambert, S (2015). A Randomized Controlled Double Blind Trial of Ciclosporin versus Prednisolone in the Management of Leprosy Patients with New Type 1 Reaction in Ethiopia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.18.

Lambert, S (2024). Strobe statement for: "Health-related quality of life of adults with cutaneous leishmaniasis at ALERT Hospital, Addis Ababa, Ethiopia". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003787.

Lamberti, O and Bustinduy, A (2024). Data for: "Morbidity Operational Research for Bilharziasis Implementation Decisions for Girls and Women (MORBID-FGS) cross sectional study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003850.

Langston, H, Fortes Francisco, A, Doidge, C, Roberts, CH, Khan, AA, Jayawardhana, S, Taylor, MC, Kelly, JM and Lewis, MD (2024). Source files for 3D printed hamster anaesthesia delivery nosecone. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012278.s002

Langston, H, Fortes Francisco, A, Doidge, C, Roberts, CH, Khan, AA, Jayawardhana, S, Taylor, MC, Kelly, JM and Lewis, MD (2024). Source data for: "Dynamics of Trypanosoma cruzi infection in hamsters and novel association with progressive motor dysfunction". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012278.s003

Lawrence, D, Ssali, A, Moshashane, N, Nabaggala, G, Maphane, L, Harrison, T, Meya, D, Jarvis, J and Seeley, J (2022). Support files for: The acceptability of the AMBITION-cm treatment regimen for HIV-associated cryptococcal meningitis: findings from a qualitative methods study of participants and researchers in Botswana and Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003106.

Levy, O, Kollmann, T, Kampmann, B, Ozonoff, A, Tebbutt, S, Hancock, R, Steen, H and Brinkman, R (2017). Systems Biology to Identify Biomarkers of Neonatal Vaccine Immunogenicity. [Data Collection]. ImmPort. https://doi.org/10.21430/M35PWV2M56

Limbada, M, Ayles, H and Macleod, D (2021). A Comparison of Different Community Models of ART Delivery Amongst Stable HIV+ Patients in two Urban Settings in Zambia - Study Protocol. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002116.

Limburg, H, Meester, W, Kuper, H and Polack, S (2016). RAAB - Rapid Assessment of Avoidable Blindness. [Data Collection]. Community Eye Health Journal. https://www.cehjournal.org/resources/raab/

Liverani, M, Nguon, C, Sok, R, Kim, D, Nou, P, Nguon, S and Yeung, S (2017). Improving access to health care amongst vulnerable populations: a qualitative study of village malaria workers in Kampot, Cambodia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3774209

London School of Hygiene & Tropical Medicine (2019). Comparing antimicrobial resistance prediction pipelines from bacterial whole genome sequencing data: An inter-laboratory study. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB34513

London School of Hygiene & Tropical Medicine (2019). Next-generation sequencing of the microbiome of the conjunctiva in patients with and without clinical symptoms of trachoma. [Data Collection]. NIH BioProject. https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA515408

Lubell, Y, Mills, A, Whitty, CJ and Staedke, SG (2010). Model S1 - An Economic Evaluation of Home Management of Malaria in Uganda: An Interactive Markov Model. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0012439.s001

Lynham, S and Dawson, L (2021). C. difficle p-cresol production. [Data Collection]. ProteomeXchange. http://proteomecentral.proteomexchange.org/PXD028948

M

MacPherson, E, Dixon, J, Sanudi, E, Nkaombe, A, Reynolds, J, Roberts, C, Lal, S and Chandler, C (2022). FIEBRE Social Science - Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001771.

MacPherson, P (2021). petermacp/tbcascade. [Data Collection]. Github. https://github.com/petermacp/tbcascade

MacPherson, P, Khundi, M, Nliwasa, M, Choko, AT, Phiri, VK, Webb, EL, Dodd, PJ, Cohen, T, Harris, R and Corbett, EL (2018). BlantyreTBEpi. [Data Collection]. Github. https://github.com/petermacp/BlantyreTBEpi

Mactaggart, I (2021). Gambia National Eye Health Survey 2019 Study Documents. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/EKCDT

Mactaggart, I and Polack, S (2015). Building the Evidence Base in Disability: Anonymised datasets for population-based survey. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.116.

Mainga, T, Gondwe, M, Mactaggart, I, Stewart, RC, Shanaube, K, Ayles, H and Bond, V (2022). Additional file 1 of Qualitative study of patient experiences of mental distress during TB investigation and treatment in Zambia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.20342552.v1

Marks, M (2017). Epidemiology of yaws in the Solomon Islands and the impact of a trachoma control programme. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.268.

Marks, M (2017). Learning Clinical Epidemiology with R. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Marks, M (2017). Scabies Dataset for "Learning Clinical Epidemiology with R" tutorial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000607.

Marks, M, Butcher, RMR, Roberts, C, Holland, M, Solomon, AW and Mabey, D (2017). Trachoma datasets for "Learning Clinical Epidemiology with R" tutorial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000610.

Marks, M, Camacho, A, Kucharski, A, Funk, S, Edmunds, J and Piot, P (2017). Ebola Dataset for "Learning Clinical Epidemiology with R" tutorial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000608.

Marks, M, Goncalves, A, Vahi, V, Sokana, O, Puiahi, E, Zhang, Z, Dalipanda, T, Bottomley, C, Mabey, D and Solomon, A (2014). Evaluation of a Rapid Diagnostic Test for Yaws Infection in a Community Surveillance Setting. Dataset S1. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0003156.s002

Marks, M, Kwakye-Maclean, C, Doherty, R, Adwere, P, Aziz Abdulai, A, Duah, F, Ohene, S, Mitja, O, Oguti, B, Solomon, AW, Mabey, DCW, Adu-Sarkodie, Y, Asiedu, K and Ackumey, MM (2017). Knowledge, attitudes and practices towards yaws and yaws-like skin disease in Ghana. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0005820

Marks, M, Mitja, O, Fitzpatrick, C, Asiedu, K, Solomon, AW, Mabey, D and Funk, S (2017). R files for: Mathematical Modeling of Programmatic Requirements for Yaws Eradication. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.266.

Marks, M, Mitjà, O, Bottomley, C, Kwakye, C, Houinei, W, Bauri, M, Adwere, P, Abdulai, AA, Dua, F, Boateng, L, Wangi, J, Ohene, S, Wangnapi, R, Simpson, SV, Miag, H, Addo, KK, Basing, LA, Danavall, D, Chi, KH, Pillay, A, Ballard, R, Solomon, AW, Chen, CY, Bieb, SV, Adu-Sarkodie, Y, Mabey, DCW and Asiedu, K (2018). Supplement to: "Comparative efficacy of low-dose versus standard-dose azithromycin for patients with yaws: a randomised non-inferiority trial in Ghana and Papua New Guinea". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000766.

Marks, M and Roberts, C (2017). Poisson Regression Dataset for "Learning Clinical Epidemiology with R" tutorial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000609.

Marks, M, Sammut, T, Cabral, MG, da Silva, ET, Goncalves, A, Rodrigues, A, Manjuba, C, Nakutum, J, Ca, J, D'Alessandro, U, Achan, J, Logan, J, Bailey, RL, Mabey, D, Last, AR and Walker, S (2019). The prevalence of scabies, pyoderma and other communicable dermatoses in the Bijagos Archipelago, Guinea-Bissau: S1 Data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0007820.s002

Marks, M, Taotao-Wini, B, Satorara, L, Engelman, D, Nasi, T, Mabey, D and Steer, AC (2015). Long Term Control of Scabies Fifteen Years after an Intensive Treatment Programme. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0004246.s002

Marks, M, Vahi, V, Sokana, O, Chi, C, Puiahi, E, Kilua, G, Pillay, A, Dalipanda, T, Bottomley, C, Solomon, AW and Mabey, D (2015). Impact of Community Mass Treatment with Azithromycin for Trachoma Elimination on the Prevalence of Yaws. Supplementary data file. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0003988.s002

Marlais, T (2019). Diagnostics development for the neglected parasitic diseases strongyloidiasis and visceral leishmaniasis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/PUBS.04654991

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). BLAST results: S. stercoralis orthologues of the S. ratti E/S proteome. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s003

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). Candidate coproantigen sequences in fasta format. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s006

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). Predicted epitopes in S. stercoralis proteins using BepiPred and bcepred. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s005

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). Protein identity, features and gene expression levels of S. stercoralis orthologues of S. ratti E/S proteomic data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s004

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). S. stercoralis genes (n = 328) differentially expressed in gut-dwelling (dark blue) versus non-gut-dwelling (light blue) life stages of the nematode with those containing predicted epitopes indicated. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s002

Marukutira, T, Block, L, Alwano, MG, Behel, S, Jarvis, J, Chakalisa, U, Powis, K, Novitsky, V, Bapati, W, Wang, H, Ussery, F, Lebelonyane, R, Mills, LA, Moore, J and Bachanas, P (2019). Comparison of knowledge of HIV status and treatment coverage between non-citizens and citizens: Botswana Combination Prevention Project (BCPP). [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0221629

Mason, DS, Marks, M, Sokana, O, Solomon, AW, Mabey, DC, Romani, L, Kaldor, J, Steer, AC and Engelman, D (2016). The Prevalence of Scabies and Impetigo in the Solomon Islands: A Population-Based Survey. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0004803.s002

Matos, M, Reis, J, Smythe, T, Duttine, A, Ferrite, S and Kuper, H (2020). The feasibility of a group intervention for children with congenital zika syndrome – qualitative dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001762.

McCarthy, K, Fielding, K, Churchyard, GJ and Grant, AD (2018). Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0191608.s001

McQuaid, CF, Henrion, MYR, Burke, RM, MacPherson, P, Nzawa-Soko, R and Horton, KC (2022). Additional file 1 of Inequalities in the impact of COVID-19-associated disruptions on tuberculosis diagnosis by age and sex in 45 high TB burden countries. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.21550982.v1

Mccreesh, N, Dlamini, V, Edwards, A, Olivier, S, Dayi, N, Dikgale, K, Nxumalo, S, Dreyer, J, Baisley, K, Siedner, MJ, White, RG, Herbst, K, Grant, AD and Harling, G (2021). Social contact information from PIPSA residents in uMkhanyakude before and during the Covid-19 pandemic – data from the Umoya Omuhle and Covid Social Contacts studies. [Data Collection]. AHRI Data Repository. https://doi.org/10.23664/AHRI.UOANDCSC.DATASET.2021

Mcharo, R (2022). STIs prevalence among young adults aged 18-24years in Mbeya-Tanzania. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19093115.v3

Mcharo, R, Olomi, W, Mayaud, P, Msuya, SE and Philippe , (2020). Risky sexual behaviours among young adults attending Higher Learning Institutions in Mbeya-Tanzania. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.12806948.v2

Mee, P, Alexander, N and Colón-González, FJ (2021). Paul-Mee/clic_brazil. [Data Collection]. Github. https://github.com/Paul-Mee/clic_brazil

Meyer-Rath, G, Pienaar, J, Brink, B, Van Zyl, A, Muirhead, D, Grant, AD, Churchyard, GJ, Watts, C and Vickerman, P (2015). The impact of company-level ART provision to a mining workforce in South Africa: a cost–benefit analysis. [Data Collection]. Boston University Libraries. https://hdl.handle.net/2144/10817

Migchelsen, S (2016). Dataset for: Defining seropositivity thresholds for use in trachoma elimination studies. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.111.

Migchelsen, S and Mabey, D (2017). Trachoma prevalence and age-specific prevalence of anti-Pgp3 antibodies from Lower River Region and Upper River Region, The Gambia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.130.

Mitry, D, Williams, C, Northstone, K, Akter, A, Jewel, J, Khan, N, Muhit, M, Gilbert, C and Bowman, R (2016). Perceptual visual dysfunction, physical impairment and quality of life in Bangladeshi children with cerebral palsy: Supporting information. [Data Collection]. BMJ. https://doi.org/10.1136/bjophthalmol-2015-307296

Monod, M, Brizzi, A, Ratmann, O, Dan, S, Xi, X, Galiwango, R, Ssekubugu, R, Chen, Y, Kankaka, EN, Ssempijja, V, Abeler-Dörner, L, Akullian, A, Blenkinsop, AP, Bonsall, D, Chang, L, Fraser, C, Golubchik, T, Gray, R, Jackson, J, Laeyendecker, O, Mills, L, Quinn, T, Santelli, J, Sewankambo, N, Spencer, S, Ssekasanvu, J, Waver, M, Serwadda, D, Godfrey-Faussett, P, Kagaayi, J and Grabowski, MK (2023). Phylogenetic and epidemiologic data relating to age-specific HIV incidence and transmission in Rakai, Uganda, 2003-2018. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7741616

Moore, CE, Elwin, K, Phot, N, Seng, C, Mao, S, Suy, K, Kumar, V, Nader, J, Bousfield, R, Perera, S, Bailey, JW, Beeching, NJ, Day, NPJ, Parry, CM and Chalmers, RM (2016). Molecular Characterization of Cryptosporidium Species and Giardia duodenalis from Symptomatic Cambodian Children. [Data Collection]. PLoS neglected tropical diseases. http://dx.doi.org/10.1371/journal.pntd.0004822.s002

Moradigaravand, D, Martin, V, Peacock, SJ and Parkhill, J (2016). Files for "Evolution and epidemiology of multidrug resistant Klebsiella pneumoniae in the UK and Ireland". [Data Collection]. Mendeley Data. https://doi.org/10.17632/xfw8n3wzs5.1

Morhason-Bello, IO, Baisley, K, Pavon, MA, Adewole, IF, Bakare, RA, de Sanjosé, S, Francis, SC and Watson-jones, D (2022). Concordance of genotype specific HPV infections across the four anatomic sites. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0265269.s004

Mtuy, T (2024). Nepal Traditional Healers KAP Survey dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003843.

Mtuy, T (2024). Studies of microbial keratitis treatment, prevention and diagnosis in Nepal and East Africa. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003813.

Mtuya, C, Cleland, CR, Philippin, H, Paulo, K, Njau, B, Makupa, WU, Hall, C, Hall, A, Courtright, P and Mushi, D (2016). Reasons for poor follow-up of diabetic retinopathy patients after screening in Tanzania: a cross-sectional study. [Data Collection]. BMC Ophthalmology. https://doi.org/10.1186/s12886-016-0288-z.

Mudzengi, D, Sweeney, S, Hippner, P, Kufa, T, Fielding, K, Grant, AD, Churchyard, GJ and Vassall, A (2020). The patient costs of care for those with TB and HIV: a cross-sectional study from South Africa. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001593.

Muhammad, N, Adamu, MD, Caleb, M, Maishanu, NM, Jabo, AM, Rabiu, MM, Bascaran, C, Isiyaku, S and Foster, A (2018). Data from: Changing patterns of cataract services in North-West Nigeria: 2005–2016. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.13bp2

Murdoch, M, Coscione, S, Esau, T, Kekeubata, E, Diau, J, Asugeni, R, MacLaren, D, Steer, AC, Kositz, C and Marks, M (2018). Study data for "Impact of ivermectin administered for scabies treatment on the prevalence of head lice in Atoifi, Solomon Islands". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0006825.s002

Mureyi, D, Katena, NA and Monera-Penduka, T (2022). FGD transcripts for: "Perceptions of diabetes patients and their caregivers regarding access to medicine in a severely constrained health system: A qualitative study in Harare, Zimbabwe". [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0000255.s005

Mwangi, N, Bascaran, C, D'Esposito, F, Gordon, I, Mutie, D, Niyonzima, J, Khanal, S, Kwamboka, L, Mdala, S, Lopez Ulloa, JA, Ramke, J, Evans, JR and Burton, MJ (2020). Interventions to promote successful referral to eye services for people with suspected diabetic retinopathy or macula oedema in low- and middle income countries: protocol for a rapid review. [Data Collection]. Open Science Framework. https://osf.io/djzmr/

Mwenge, L, Sande, L, Mangenah, C, Ahmed, N, Kanema, S, d'Elbee, M, Sibanda, E, Kalua, T, Ncube, G, Johnson, CC, Hatzold, K, Cowan, FM, Corbett, EL, Ayles, H, Maheswaran, H and Terris-Prestholt, F (2017). HIV Self-Testing Africa (STAR) - Facility-based HIV testing cost data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.269.

N

Nahar, P, Kannuri, NK, Mikkilineni, S, Murthy, GVS and Phillimore, P (2019). Qualitative (interview-based and ethnographic) data on health-seeking, health-care and medical pluralism in rural areas of Andhra Pradesh, India. [Data Collection]. Newcastle University. https://doi.org/10.17634/103234-2

Nash, S, Mentzer, AJ, Lule, SA, Kizito, D, Smits, G, van der Klis, FR and Elliott, A (2017). Entebbe Mother and Baby Study - Data at one year. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.128.

Natividad, A, Freeman, TC, Jeffries, D, Burton, MJ, Mabey, DCW, Bailey, RL and Holland, MJ (2010). Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE20436

Natukunda, A, Nkurunungi, G, Zirimenya, L, Nassuuna, J, Elliott, AM and Webb, E (2024). Data supporting "Does schistosome or malaria exposure contribute to urban-rural differences in vaccine responses in Uganda? A causal mediation analysis using data from three linked randomised controlled trials.". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003761.

Ndzomo, P, Tchatchouang, S, Tabah, EN, Njamnshi, T, Tsanga, MVN, Bondi, JA, Handley, R, Beiras, CG, Tchatchueng, J, Müller, C, Lüert, S, Knauf, S, Boyomo, O, Harding-Esch, E, Mitja, O, Crucitti, T, Marks, M and Eyangoh, S (2023). Distribution of H. ducreyi and T. pallidum positive participants per site. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011553.s001

Ndzomo, P, Tchatchouang, S, Tabah, EN, Njamnshi, T, Tsanga, MVN, Bondi, JA, Handley, R, Beiras, CG, Tchatchueng, J, Müller, C, Lüert, S, Knauf, S, Boyomo, O, Harding-Esch, E, Mitja, O, Crucitti, T, Marks, M and Eyangoh, S (2023). Socio-demographic characteristics of participants. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011553.s002

Nimmo, C, Ortiz, AT, Tan, CCS, Pang, J, Acman, M, Millard, J, Padayatchi, N, Grant, AD, O’Donnell, M, Pym, A, Brynildsrud, OB, Eldholm, V, Grandjean, L, Didelot, X, Balloux, F and van Dorp, L (2024). Detection of a historic reservoir of bedaquiline/clofazimine resistance-associated variants in Mycobacterium tuberculosis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.7082041.v1

Nliwasa, M, MacPherson, P, Chisala, P, Kamdolozi, M, Khundi, MJ, Kaswaswa, K, Mwapasa, M, Msefula, C, Sohn, H, Flach, C and Corbett, E (2016). LAMP minimal dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0155101.s001

Nsamba, J, Lule, SA, Namara, B, Zziwa, C, Akurut, H, Lubyayi, L, Akello, F, Tumusiime, J, Elliott, AM and Webb, EL (2019). BP_Body_Comp. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.7775669.v1

O

Olaru, ID (2021). ARGUS study - clinical and bacteriological outcomes dataset. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.v41ns1rwb

Olaru, ID (2020). Evaluation of the InTray and Compact Dry culture systems for the diagnosis of urinary tract infections - ARGUS study dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001997.

Olaru, I (2021). ARGUS clinical and bacteriological outcomes dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002110.

Olubiyi, OA, Rotimi, BF, Afolayan, MA, Alatishe-Muhammad, BW, Olubiyi, OM and Dahiru Balami, A (2022). Additional file 1 of The ten-year risk of developing cardiovascular disease among public health workers in North-Central Nigeria using Framingham and atherogenic index of plasma risk scores. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19669987.v1

P

Parker, E (2020). Covid 2019 tracker. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://vac-lshtm.shinyapps.io/ncov_tracker/

Parker, E (2021). eparker12/RoVI: Analysis code and data for RoVI study primary outcomes. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5528336

Parker, E (2021). vac-lshtm/VaC_tracker. [Data Collection]. Github. https://github.com/vac-lshtm/VaC_tracker

Parker, EP, Praharaj, I, Zekavati, A, Lazarus, RP, Giri, S, Operario, DJ, Liu, J, Houpt, E, Iturriza-Gómara, M, Kampmann, B, John, J, Kang, G and Grassly, NC (2018). Influence of the intestinal microbiota on the immunogenicity of oral rotavirus vaccine given to infants in south India. [Data Collection]. Vaccine. https://doi.org/10.1016/j.vaccine.2017.11.031

Parker, E and Horne, E (2022). opensafely/ckd-coverage-ve. [Data Collection]. Github. https://github.com/opensafely/ckd-coverage-ve

Paulet, E, Contreras, V, Galhaut, M, Rosenkrands, I, Holland, M, Burton, MJ, Dietrich, J, Gallouët, A, Bosquet, N, Relouzat, F, Langlois, S, Follmann, F, Le Grand, R, Labetoulle, M and Rousseau, A (2024). Multimodal mucosal and systemic immune characterization of a non-human primate trachoma model highlights the critical role of local immunity during acute phase disease. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.69p8cz982

Perera, V, Allen, LN, Farrand, C, Kwong, EJL, Liyanage, I and Wickramasinghe, K (2023). Evaluating the role of salt intake in achieving WHO NCD targets in the Eurasian Economic Union: A PRIME modeling study. S1 File. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0289112.s012

Phillips, D, Gemechu, T, Parry, E, Yacoub, M and Kotit, S (2021). Community-based prevalence of Rheumatic Heart Disease in rural Ethiopia: five-year follow-up. [Data Collection]. University of Southampton, Southampton, United Kingdom. https://doi.org/10.5258/SOTON/D1987

Pickering, H, Burr, SE, Derrick, T, Makalo, P, Joof, H, Hayward, RD and Holland, MJ (2017). Profiling and validation of individual and patterns of Chlamydia trachomatis-specific antibody responses in trachomatous trichiasis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3716170.

Pickering, H, Hart, JD, Burr, S, Stabler, R, Maleta, K, Kalua, K, Bailey, RL and Holland, MJ (2022). Additional file 1 of Impact of azithromycin mass drug administration on the antibiotic-resistant gut microbiome in children: a randomized, controlled trial. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17982643.v1

Pierret, A, Ribolzi, O, Pongmala, K, Oliva, P, Pando, A, Davong, V, Rattanavong, S, Silvera, N, Luangraj, M, Boithias, L, Xayyathip, K, Menjot, L, Macouin, M, Rochelle-Newall, E, Robain, H, Vongvixay, A, Simpson, AJH and Dance, DAB (2022). Distribution of Burkholderia pseudomallei and soil properties within a 300-cm deep profile. [Data Collection]. DataSuds. https://doi.org/10.23708/L3IJGD

Proaño, A, Bravard, MA, López, JW, Lee, GO, Bui, D, Datta, S, Comina, G, Zimic, M, Coronel, J, Caviedes, L, Cabrera, JL, Salas, A, Ticona, E, Vu, NM, Kirwan, DE, Loader, MI, Friedland, JS, Moore, DAJ, Evans, CA, Tracey, BH and Gilman, RH (2017). Data from: Dynamics of cough frequency in adults undergoing treatment for pulmonary tuberculosis. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.gv234

Pumirat, P, Cuccui, J, Stabler, R, Stevens, JM, Muangsombut, V, Singsuksawat, E, Stevens, MP, Wren, B and Korbsrisate, S (2014). Transcription profiling of Burkholderia pseudomallei under salt stress and the effect on a type III secretion system. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2302/

Putri, AI, de Sabbata, K, Agusni, RI, Alinda, MD, Darlong, J, De Barros, B, Walker, SL, Zweekhorst, MBM and Peters, RMH (2022). Understanding leprosy reactions and the impact on the lives of people affected: An exploration in two leprosy endemic countries. Socio-demographic data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010476.s001

Putri, AI, de Sabbata, K, Agusni, RI, Alinda, MD, Darlong, J, de Barros, B, Walker, SL, Zweekhorst, MBM and Peters, RMH (2022). Understanding leprosy reactions and the impact on the lives of people affected: An exploration in two leprosy endemic countries. Interview Guide for People with Leprosy Reactions. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010476.s002

R

Ramadhani, A, Derrick, T, Macleod, D, Massae, P, Malisa, A, Mbuya, K, Mtuy, T, Makupa, W, Roberts, CH, Bailey, RL, Mabey, D, Holland, MJ and Burton, MJ (2019). Ocular immune responses, Chlamydia trachomatis infection and clinical signs of trachoma before and after azithromycin mass drug administration in a treatment naïve trachoma-endemic Tanzanian community. [Data Collection]. PLoS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0007559

Ramke, J, Silva, JC, Gichangi, M, Ravilla, T, Burn, H, Buchan, JC, Welch, V, Gilbert, CE and Burton, MJ (2023). Round 2 responses from panellists. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0000631.s005

Randera-Rees, S, Safari, WC, Gareta, D, Herbst, K, Baisley, K and Grant, AD (2021). Clinic attendance by sex and HIV status in rural South Africa. [Data Collection]. Africa Health Research Institute (AHRI). https://doi.org/10.23664/AHRI.CLINIC.VISITS.CODE.2021

Regassa, TT, Daba, KT, Fabian, ID and Mengasha, AA (2021). Additional file 1 of Knowledge, attitude and practice of Ethiopian pediatricians concerning childhood eye diseases. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14053083.v1

Rehman, AM, Simms, V, McHugh, G, Mujuru, H, Ngwira, LG, Semphere, R, Moyo, B, Bandason, T, Odland, JO and Ferrand, RA (2022). Adherence to additional medication for management of HIV-associated comorbidities among older children and adolescents taking antiretroviral therapy. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0269229.s001

Reichenberger, V (2022). Participatory Visual Methods with caregivers of children with Congenital Zika Syndrome in Colombia: A case study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002745.

Renneker, KK, Mtuy, TB, Kabona, G, Mbwambo, SG, Mosha, P, Mollel, JM, Hooper, P, Emerson, PM, Hollingsworth, TD, Butcher, R, Solomon, AW and Harding-Esch, EM (2024). Framework Matrix. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011941.s004

Renneker, KK, Mtuy, TB, Kabona, G, Mbwambo, SG, Mosha, P, Mollel, JM, Hooper, P, Emerson, PM, Hollingsworth, TD, Butcher, R, Solomon, AW and Harding-Esch, EM (2024). SHS Questionnaire. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011941.s003

Roberts, C (2012). Droplet Digital PCR (ddPCR) data analysis scripts. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.31.

Roberts, C (2018). ELISA Plate Washer. [Data Collection]. Thingiverse. https://www.thingiverse.com/thing:2856117

Roberts, C (2017). FPC Grader. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.1116798

Roberts, C (2020). Female Reproductive System. [Data Collection]. Thingiverse. https://www.thingiverse.com/thing:4149401

Roberts, C (2020). Microscope Smartphone Adapter (Customisable). [Data Collection]. Thingiverse. https://www.thingiverse.com/thing:4145621

Roberts, C (2017). Open Data Kit PDF Report Creator. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://github.com/chrissyhroberts/ODK_PDF_Reports

Roberts, C (2022). chrissyhroberts/OMR_LSHTM. [Data Collection]. Github. https://github.com/chrissyhroberts/OMR_LSHTM

Roberts, CH, Ouburg, S, Preston, MD, de Vries, HJC, Holland, MJ and Morré, SA (2018). Results of pathway enrichment analysis using Database for Annotation, Visualization and Integrated Discovery (DAVID). [Data Collection]. Mediators of Inflammation. https://doi.org/10.1155/2018/3434101

Roberts, C, Brindle, H, Rogers, N, Eggo, RM, Enria, L and Lees, S (2021). Data for: "Vaccine Confidence and Hesitancy at the start of COVID-19 vaccine deployment in the UK: An embedded mixed-methods study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002337.

Roberts, C and Bustinduy, A (2022). Female Genital Schistosomiasis - Medical Training Device. [Data Collection]. Thingiverse. https://www.thingiverse.com/thing:5389502

Roberts, C and Bustinduy, A (2022). Swabbable Vagina and Vulva - Medical training device. [Data Collection]. Thingiverse. https://www.thingiverse.com/thing:5389526

Roberts, C and LSHTM Global Health Analytics Group (2020). LSHTM-ORK/OpenMakingKit. [Data Collection]. Github. https://github.com/LSHTM-ORK/OpenMakingKit/

Roberts, C, Mtuy, T, Derrick, T, Burton, M and Holland, M (2012). Eyescores - Electronic Data Capture and photographic evidence collection platform for biological field studies. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.32.

Roberts, C, Rogers, N, Waterlow, N, Brindle, H, Enria, L and Lees, S (2021). Behavioural change towards reduced intensity physical activity is disproportionately prevalent among adults with serious health issues or self-perception of high risk during the UK COVID-19 lockdown. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002091.

Roberts, C and Stott, C (2021). LSHTM-ORK/ODK_Biometrics. [Data Collection]. Github. https://github.com/LSHTM-ORK/ODK_Biometrics

Roberts, C, Stott, C, Lal, S, Marks, M, Shawe-Taylor, M and Chaudhry, Z (2022). Biometric linkage of longitudinally collected electronic case report forms and confirmation of subject identity: An open framework for Open Data Kit (ODK) and related tools. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003115.

Roberts, C, Stott, C and McNulty, T (2024). Keppel - Biometrics Solutions for ODK Ecosystem Tools. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004433.

Roberts, I, Coats, T, Edwards, P, Gilmore, I, Jairath, V, Ker, K, Manno, D, Shakur, H, Stanworth, S and Veitch, A (2014). HALT-IT - tranexamic acid for the treatment of gastrointestinal bleeding: study protocol for a randomised controlled trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.89.

Robinson, A, Reis de Oliveira Gomes, L, Abdurahman, OS, Alemayehu, W, Shuka, G, Melese, E, Guye, M, Legesse, D, Elias, E, Temam, K, Korso, HK, Muluadam, AA, Virginia, S, Lambert, S, Walker, SL, Habtamu, E, Solomon, AS, Last, AR, Macleod, D, Burton, MJ and Logan, JG (2021). Primary and secondary measurements collected when trialling use of insecticide-treated scarves to protect against Musca sorbens. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002423.

Robinson, A, Versteeg, B, Shafi Abdurahman, O, Clatworthy, I, Shuka, G, Debe, D, Hordofa, G, Reis de Oliveira Gomes, L, Abraham Aga, M, Dumessa, G, Sarah, V, Macleod, D, Last, AR, Burton, MJ and Logan, JG (2022). Field entomology data from Ethiopian trachoma population survey and laboratory transmission experiments for Musca sorbens and Chlamydia trachomatis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003114.

Rodriguez, CA, Lodi, S, Horsburgh, CR, Bastard, M, Hewison, C, Huerga, H, Khan, M, Khan, PY, Khan, U, Oyewusi, L, Padayachee, S, Mitnick, CD and Franke, MF (2022). Selection bias in multidrug-resistant tuberculosis cohort studies assessing sputum culture conversion. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0276457.s003

Rotsaert, A, Sibanda, E, Hatzold, K, Johnson, C, Corbett, E, Neuman, M and Cowan, F (2022). Additional file 1 of Did you hear about HIV self-testing? HIV self-testing awareness after community-based HIVST distribution in rural Zimbabwe. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.18393032.v1

Runcharoen, C, Moradigaravand, D, Blane, B, Paksanont, S, Thammachote, J, Anun, S, Parkhill, J, Chantratita, N and Peacock, SJ (2017). Whole genome sequencing reveals high-resolution epidemiological links between clinical and environmental Klebsiella pneumoniae. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3673891

Rylance, S, Ferrand, R, Bandason, T and McHugh, G (2019). ZENITH spirometry of older children and adolescents living with HIV in Zimbabwe. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001045.

Rylance, S, Ferrand, R, McHugh, G and Bandason, T (2019). INHALE spirometry of older children and adolescents living with HIV and on ART in Zimbabwe. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001046.

S

Sabherwal, S (2019). extended data for protocol. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.7503887.v4

Saito, N, Solante, RM, Guzman, FD, Telan, EO, Umipig, DV, Calayo, JP, Frayco, CH, Lazaro, JC, Ribo, MR, Dimapilis, AQ, Dimapilis, VO, Villanueva, AM, Mauhay, JL, Suzuki, M, Yasunami, M, Koizumi, N, Kitashoji, E, Sakashita, K, Yasuda, I, Nishiyama, A, Smith, C, Ariyoshi, K and Parry, CM (2022). A prospective observational study of community-acquired bacterial bloodstream infections in Metro Manila, the Philippines. Data file of the study. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010414.s003

Samuels, THA, Shete, PB, Ojok, C, Nalugwa, T, Farr, K, Turyahabwe, S, Katamba, A, Cattamanchi, A and Moore, DAJ (2021). Where will it end? Pathways to care and catastrophic costs following negative TB evaluation in Uganda. Raw data for analysis. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0253927.s005

Sanya, RE, Tumwesige, E, Elliott, AM and Seeley, J (2017). Perceptions about interventions to control schistosomiasis among the Lake Victoria island communities of Koome, Uganda. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0005982

Saso, A (2024). GaPs Clinical Data Dictionaries. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11567608

Saso, A (2024). The Gambian Pertussis Study (GaPs) Protocol: Supplementary data. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11567608

Schaap, A and Amofa-Sekyi, M (2024). Dataset for: "Comparing patterns of recent and remote Mycobacterium tuberculosis infection determined using the QuantiFERON-TB Gold Plus assay in a high TB burden setting". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003879.

Scriba, TJ, Kimuda, SG, Biraro, IA, Bagaya, BS, Raynes, JG and Cose, S (2018). S1 Data File for: "Characterising antibody avidity in individuals of varied Mycobacterium tuberculosis infection status using surface plasmon resonance". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0205102.s007

Shanaube, K, Gachie, T, Hoddinott, G, Schaap, A, Floyd, S, Mainga, T, Bond, V, Hayes, R, Fidler, S and Ayles, H (2022). Depressive symptoms and HIV risk behaviours among adolescents enrolled in the HPTN071 (PopART) trial in Zambia and South Africa. Aggregate dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278291.s012

Shen, H, Tang, S, Mahapatra, T, Tucker, JD, Huang, S, Yang, B, Zhao, J, Detels, R and Tang, W (2016). Condomless Vaginal Intercourse and Its Associates among Men Who Have Sex with Men in China. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0154132.s001

Shepherd, JG, Ashraf, S, Salazar-Gonzalez, JF, Salazar, MG, Downing, RG, Bukenya, H, Jerome, H, Mpanga, JT, Davis, C, Tong, L, Sreenu, VB, Atiku, LA, Logan, N, Kajik, E, Mukobi, Y, Mungujakisa, C, Olowo, MV, Tibo, E, Wunna, F, Jackson Ireland, H, Blunsum, AE, Owolabi, I, da Silva Filipe, A, Bwogi, J, Willett, BJ, Lutwama, JJ, Streicker, DG, Kaleebu, P and Thomson, EC (2024). Widespread human exposure to ledanteviruses in Uganda: A population study. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012297.s006

Simms, V and Ferrand, R (2024). VITALITY: Vitamin D for adolescents with HIV to reduce musculoskeletal morbidity and immunopathology - Baseline Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003868.

Simms, V, Dziva Chikwari, C, Ferrand, R and Bandason, T (2024). Data for: "Differentiated HIV care cascade for youth in Zimbabwe". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003649.

Simons, D (2022). DidDrog11/lassa_underreporting. [Data Collection]. Github. https://github.com/DidDrog11/lassa_underreporting

Simons, D, Attfield, LA, Jones, KE, Watson-Jones, D and Kock, R (2023). Data from: Rodent trapping studies as an overlooked information source for understanding endemic and novel zoonotic spillover. [Data Collection]. GigaScience Journal. https://doi.org/10.15468/zr6frj

Sliversteri, S, Ssali, A, Bahemuka, UM, Nsubuga, D, Muwanga, M, Nsereko, C, Ssemwanga, E, Robert, A, Seeley, J, Elliott, A and Ruzagira, E (2024). Structural and social factors affecting COVID-19 vaccine uptake among healthcare workers and older people in Uganda: A qualitative analysis. Data file. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0002188.s003

Smythe, T, Nogaro, M, Clifton, LJ, Mudariki, D, Theologis, T and Lavy, C (2020). ACT and photograph scores dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001563.

Smythe, T, Reichenberger, V, Pinzón, EM, Hurtado, IC, Rubiano, L and Kuper, H (2021). Data collection tools for a study on establishing the feasibility of parent support groups for children with Congenital Zika Syndrome and their families in Colombia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002245.

Staedke, SG, Donnelly, M, Hemingway, J, Kamya, M and Dorsey, G (2020). Dataset: LLINEUP Cluster Randomized Trial. [Data Collection]. ClinEpiDB. https://clinepidb.org/ce/app/workspace/analyses/DS_7c4cd6bba9/new

Stoner, MCD, Kilburn, K, Godfrey-faussett, P, Ghys, P and Pettifor, AE (2021). Supporting files for "Cash transfers for HIV prevention: A systematic review". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Sturt, A (2021). Data for: "Association between Female Genital Schistosomiasis and HIV-1 incidence: a retrospective cohort study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001927.

Sturt, A, Bustinduy, A and Phiri, C (2020). BILHIV acceptability dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001618.

Sturt, A, Bustinduy, A and Webb, E (2021). Data for: "Cervicovaginal Immune Activation in Zambian Women with Female Genital Schistosomiasis". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001926.

Sturt, A, Rafferty, H and Bustinduy, A (2021). Data for: "Association between cervical dysplasia and female genital schistosomiasis diagnosed by genital PCR in Zambian women". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002282.

Sturt, A, Webb, E, Bristowe, H and Bustinduy, A (2022). Data for: Expert review of images from hand-held colposcopy in Zambian women with genital schistosomiasis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003182.

Sturt, A, Webb, E and Bustinduy, A (2020). BILHIV Genital Self-Sampling Dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001777.

Sturt, A, Webb, E and Bustinduy, A (2021). Data for: "Association of Female Genital Schistosomiasis with the Cervicovaginal Microbiota and Sexually Transmitted Infections in Zambian Women". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002340.

Sturt, A, Webb, E and Bustinduy, A (2022). Data for: “The presence of hemoglobin in cervicovaginal lavage is not associated with genital schistosomiasis in Zambian women from the BILHIV study”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002983.

Suau Sans, M, Manneh, M, Ceesay, I, Bittaye, A, de Crombrugghe, G, Keeley, AJ, de Silva, TI, Palmer, J, Armitage, E and Marks, M (2024). Interview transcripts for: "Health-seeking behaviour and beliefs around sore throat in The Gambia: A qualitative study". [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0002257.s006

T

Tandon, R, Vashist, P, Gupta, N, Gupta, V, Yadav, S, Deka, D, Singh, S, Vishwanath, K and Murthy, G (2022). ICMR_Pterygium_Study_Data.csv. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19626003.v1

Tang, FF, Kosana, P, Jit, M, Terris-Prestholt, F, Wu, D, Ong, JJ and Tucker, JD (2023). PIF influenza costing analysis and probabilistic sensitivity analysis. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001590.s004

Tang, FF, Kosana, P, Jit, M, Terris-Prestholt, F, Wu, D, Ong, JJ and Tucker, JD (2023). PIF influenza participant questionnaire responses and donation amounts dataset. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001590.s003

Tang, W, Chen, W, Amini, A, Boeras, D, Falconer, J, Kelly, H, Peeling, R, Varsaneux, O, Tucker, JD and Easterbrook, P (2017). Diagnostic accuracy of tests to detect Hepatitis C antibody: a meta-analysis and review of the literature. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3919648.v1

Tang, W, Wei, C, Cao, B, Wu, D, Li, KT, Lu, H, Ma, W, Kang, D, Li, H, Liao, M, Mollan, KR, Hudgens, MG, Liu, C, Huang, W, Liu, A, Zhang, Y, Smith, MK, Mitchell, KM, Ong, JJ, Fu, H, Vickerman, P, Yang, L, Wang, C, Zheng, H, Yang, B and Tucker, JD (2018). Deidentified survey data for: "Crowdsourcing to expand HIV testing among men who have sex with men in China: A closed cohort stepped wedge cluster randomized controlled trial". [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1002645.s007

Tchatchouang, S, Basing, LA, Kouadio-Aboh, H, Handley, BL, G-Beiras, C, Amanor, I, Ndzomo, P, Bakheit, M, Becherer, L, Knauf, S, Müller, C, Njih-Tabah, E, Njamnshi, T, Crucitti, T, Borst, N, Lüert, S, Frischmann, S, Gmoser, H, Landmann, E, Sylla, A, Kouamé-Sina, MS, Arhinful, D, Awondo, P, Menguena, G, Harding-Esch, E, Tano, A, Kaloga, M, Koffi-Aboa, P, Konama-Kotey, N, Mitjà, O, Eyangoh, S, Kwasi-Addo, K, Ngazoa-Kakou, S and Marks, M (2024). Cameroon data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011790.s002

Tchatchouang, S, Basing, LA, Kouadio-Aboh, H, Handley, BL, G-Beiras, C, Amanor, I, Ndzomo, P, Bakheit, M, Becherer, L, Knauf, S, Müller, C, Njih-Tabah, E, Njamnshi, T, Crucitti, T, Borst, N, Lüert, S, Frischmann, S, Gmoser, H, Landmann, E, Sylla, A, Kouamé-Sina, MS, Arhinful, D, Awondo, P, Menguena, G, Harding-esch, E, Tano, A, Kaloga, M, Koffi-Aboa, P, Konama-Kotey, N, Mitjà, O, Eyangoh, S, Kwasi-Addo, K, Ngazoa-Kakou, S and Marks, M (2024). Côte d’Ivoire data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011790.s003

Tchatchouang, S, Basing, LA, Kouadio-Aboh, H, Handley, BL, G-Beiras, C, Amanor, I, Ndzomo, P, Bakheit, M, Becherer, L, Knauf, S, Müller, C, Njih-Tabah, E, Njamnshi, T, Crucitti, T, Borst, N, Lüert, S, Frischmann, S, Gmoser, H, Landmann, E, Sylla, A, Kouamé-Sina, MS, Arhinful, D, Awondo, P, Menguena, G, Harding-Esch, EM, Tano, A, Kaloga, M, Koffi-Aboa, P, Konama-Kotey, N, Mitjà, O, Eyangoh, S, Kwasi-Addo, K, Ngazoa-Kakou, S and Marks, M (2024). Ghana data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011790.s004

Tenforde, MW, Muthoga, C, Callaghan, A, Ponetshego, P, Ngidi, J, Mine, M, Jordan, A, Chiller, T, Larson, BA and Jarvis, JN (2019). Cost-effectiveness of reflex laboratory-based cryptococcal antigen screening for the prevention and treatment of cryptococcal meningitis in Botswana. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/URXAG

Tetali, S, Edwards, P, Murthy, G and Roberts, I (2015). A self-administered questionnaire to estimate the distance and mode of children's travel to school in urban India. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.90.

Thiha, N, Chinnakali, P, Harries, AD, Shwe, M, Balathandan, TP, Thein Than Tun, S, Das, M, Tin, HH, Yi, Y, Babin, FX, Lwin, TT and Clevenbergh, PA (2016). S1 Data for: "Is There a Need for Viral Load Testing to Assess Treatment Failure in HIV-Infected Patients Who Are about to Change to Tenofovir-Based First-Line Antiretroviral Therapy? Programmatic Findings from Myanmar". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0160616.s001

Thindwa, D, Jambo, KC, Ojal, J, MacPherson, P, Dennis Phiri, M, Pinsent, A, Khundi, M, Chiume, L, Gallagher, KE, Heyderman, RS, Corbett, EL, French, N and Flasche, S (2022). deusthindwa/social.contact.rates.estimation.hiv.malawi. [Data Collection]. Github. https://github.com/deusthindwa/social.contact.rates.estimation.hiv.malawi

Timire, C (2023). Data for: Coverage and effectiveness of conditional cash transfer for people with drug resistant tuberculosis in Zimbabwe. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003188.

Timire, C, Sandy, C, Ferrand, RA, Mubau, R, Shiri, P, Mbiriyawanda, O, Mbiba, F, Houben, Rein M. G. J., Pedrazzoli, D, Bond, V, Foster, N and Kranzer, K (2022). Dataset: Cash transfer project. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001027.s004

Tusting, LS, Rek, J, Arinaitwe, E, Staedke, SG, Kamya, MR, Cano, J, Bottomley, C, Johnston, D, Dorsey, G, Lindsay, SW and Lines, J (2016). Additional file 4: of Why is malaria associated with poverty? Findings from a cohort study in rural Uganda. [Data Collection]. Figshare. http://doi.org/10.6084/m9.figshare.c.3641432_D2.v1

V

Van de wijgert, JH, Verwijs, MC, Gill, AC, Borgdorff, H, van der Veer, C and Mayaud, P (2020). Pathobionts in the Vaginal Microbiota: Individual Participant Data Meta-Analysis of Three Sequencing Studies. [Data Collection]. Frontiers in Cellular and Infection Microbiology. https://doi.org/10.3389/fcimb.2020.00129

Vashist, P, Tandon, R, Murthy, G, Barua, CK, Deka, D, Singh, S, Gupta, V, Gupta, N, Wadhwani, M, Singh, R and Vishwanath, K (2020). Association of cataract and sun exposure in geographically diverse populations of India: The CASE study. First Report of the ICMR-EYE SEE Study Group. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0227868.s002

Vashist, P, Tandon, R, Murthy, G, Barua, C, Deka, D, Singh, S, Gupta, V, Gupta, N, Wadhwani, M, Singh, R and Vishwanath, K (2020). Association of cataract and sun exposure in geographically diverse populations of India: the case study. first report of the ICMR-EYE SEE study group. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.5qfttdz19

Vasileva, H, Butcher, RMR and Roberts, C (2018). Conjunctival transcriptome profiling of Solomon Islanders with active trachoma but without ocular Chlamydia trachomatis infection. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE106961

W

Walker, S, Collinson, S, Timothy, J, Zayzay, SK, Kollie, KK, Candy, N, Lebas, E, Halliday, K, Pullan, RL, Fallah, M and Marks, M (2020). A community-based validation of the International Alliance for the Control of Scabies Consensus Criteria by expert and non-expert examiners in Liberia. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0008717

Walsham, M, Kuper, H, Banks, M and Blanchet, K (2017). Social Protection & Disability in Asia-Pacific & Africa dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.265.

Wariri, O (2023). drwariri/Mapping-the-timeliness-of-routine-childhood-vaccination-in-The-Gambia-a-spatial-modelling-study. [Data Collection]. Github. https://github.com/drwariri/Mapping-the-timeliness-of-routine-childhood-vaccination-in-The-Gambia-a-spatial-modelling-study

Wigley, S, Holmer, H and Allen, LN (2021). drlukeallen/NCD-Policy-Implementation. [Data Collection]. Github. https://github.com/drlukeallen/NCD-Policy-Implementation

Wilbur, J, Kayastha, S, Mahon, T, Torondel, B, Hameed, S, Sigdel, A, Gyawali, A and Kuper, H (2021). Supplementary information for: "Qualitative study exploring the barriers to menstrual hygiene management faced by adolescents and young people with a disability, and their carers in the Kavrepalanchok district, Nepal". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14196714.v1

Wing, K, Bhaskaran, K, Pealing, L, Root, A, Smeeth, L, Van Staa, TP, Klungel, OH, Reynolds, RF and Douglas, IJ (2017). Clinical Code List - Exclusion Codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000600.

Wing, K, Bhaskaran, K, Pealing, L, Root, A, Smeeth, L, van Staa, TP, Klungel, OH, Reynolds, RF and Douglas, IJ (2017). Clinical Code List - Liver Injury Codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000601.

Wing, K, Bhaskaran, K, Pealing, L, Root, A, Smeeth, L, van Staa, TP, Klungel, OH, Reynolds, RF and Douglas, IJ (2017). Code lists for: "Quantification of the risk of liver injury associated with flucloxacillin: a UK population-based cohort study". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom, London, United Kingdom. https://doi.org/10.17037/DATA.00000606.

Wing, K, Bhaskaran, K, Pealing, L, Root, A, Smeeth, L, van Staa, TP, Klungel, OH, Reynolds, RF and Douglas, IJ (2017). Therapy Code List - Concomitant Liver Injury Drugs. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000604.

Wing, K, Bhaskaran, K, Pealing, L, Root, A, Smeeth, L, van Staa, TP, Klungel, OH, Reynolds, RF and Douglas, IJ (2017). Therapy Code List - Flucloxacillin. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000602.

Wing, K, Bhaskaran, K, Pealing, L, Root, A, Smeeth, L, van Staa, TP, Klungel, OH, Reynolds, RF and Douglas, IJ (2017). Therapy Code List - Oxytetracycline. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000603.

Witkowska McConnell, W, Davis, C, Sabir, SR, Garrett, A, Bradley-Stewart, A, Jajesniak, P, Reboud, J, Xu, G, Yang, Z, Gunson, R, Thomson, EC and Cooper, J (2021). Loop mediated isothermal amplification as a powerful tool for early diagnosis of hepatitis C virus. [Data Collection]. University of Glasgow. https://doi.org/10.5525/gla.researchdata.1127

X

XPHACTOR study (2018). XPHACTOR datasets. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000790.

Y

Yasuda, I, Saito, N, Suzuki, M, Umipig, DV, Solante, RM, Guzman, FD, Sayo, AR, Yasunami, M, Koizumi, N, Kitashoji, E, Sakashita, K, Ng, CFS, Smith, C and Ariyoshi, K (2021). Unique characteristics of new complete blood count parameters, the Immature Platelet Fraction and the Immature Platelet Fraction Count, in dengue patients. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16810771.v1

Yip, JLY, Bright, T, Ford, S, Mathenge, W and Faal, H (2018). Data from: Process evaluation of a national primary eye care programme in Rwanda. [Data Collection]. Dryad Digital Repository. https://doi.org/10.5061/dryad.2pb2f1k

Yotebieng, M, Price, JT, Chi, BH, Phiri, WM, Ayles, H, Chintu, N, Chilengi, R, Stringer, JSA and Mutale, W (2018). S1 Dataset for "Associations between health systems capacity and mother-to-child HIV prevention program outcomes in Zambia". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0202889.s001

Z

Zhao, X, Yuan, Y, Lin, Y, Zhang, T, Bai, Y, Kang, D, Li, X, Kang, W, Dlodlo, RA and Harries, AD (2018). S1 File for "Vitamin D status of tuberculosis patients with diabetes mellitus in different economic areas and associated factors in China". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0206372.s001

Zishiri, V, Conserve, DF, Haile, ZT, Corbett, EL, Hatzold, K, Meyer-Rath, G, Matsimela, K, Sande, L, D'elbee, M, Terris-Prestholt, F, Johnson, CC, Chidarikire, T, Venter, F and Majam, M (2023). Additional file 1 of Secondary distribution of HIV self-test kits by HIV index and antenatal care clients: implementation and costing results from the STAR Initiative in South Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.23281113.v1

Zishiri, V, Conserve, DF, Haile, ZT, Corbett, EL, Hatzold, K, Meyer-Rath, G, Matsimela, K, Sande, L, d'Elbee, M, Terris-Prestholt, F, Johnson, CC, Chidarikire, T, Venter, F and Majam, M (2023). Additional file 2 of Secondary distribution of HIV self-test kits by HIV index and antenatal care clients: implementation and costing results from the STAR Initiative in South Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.23281116.v1