Project

Warren-Gash, C, Davidson, J, Mcdonald, H, Cadogan, S, Forbes, H, Strongman, H, Langan, S, Mansfield, KE, Smeeth, L, Muzambi, R, Shiekh, S and LSHTM EHR Team, . (2021). Codelists for "Herpes zoster and dementia risk: a population-based matched cohort study". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002672.

Davidson, J, Warren-Gash, C, Banerjee, A, McDonald, H and Smeeth, L (2021). Codelists for: "The effect of influenza vaccine on acute cardiovascular events in people with varying cardiovascular risk: a self-controlled case-series study in England, 2008-2019". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002675.

Brellier, F (2021). Code lists for: "Incidence of Lyme disease in the United Kingdom and association with fatigue: a population-based, historical cohort study". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002625.

Muzambi, R (2021). Codelists for: "Are common infections associated with cognitive decline and neuroimaging outcomes? A historical cohort study using data from the UK Biobank study linked to primary and secondary care electronic health records". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002573.

Cox, S and Faguer, B (2021). St-ATT: The Starting Anti-Tuberculosis Treatment Cohort in the Philippines. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002313.

Countdown to 2030 Health Financing Data Analysis Centre (2021). Muskoka2 estimates of aid for reproductive, maternal, newborn, and child health. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002273.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A, Gayle, A, Strongman, H, Evans, D, Clay, S, Forbes, H, Mansfield, KE, Carreira, H, Bhaskaran, K, Bhate, K, Smeeth, L, Dedman, D, Mathur, R, Cadogan, S and LSHTM EHR team (2021). Codelists for: "Factors associated with excess mortality in the first wave of COVID-19 pandemic in the UK: a cohort analysis using the Clinical Practice Research Databank". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002269.

Bidulka, P and Vestergaard, SV (2021). Codelists for: "Adverse outcomes after partner bereavement in people with reduced kidney function: parallel cohort studies in England and Denmark". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002263.

Adesanya, E, Cook, S, Mansfield, KE, Crellin, E, Smeeth, L and Herrett, E (2021). Code lists for "Alcohol use recording in people with depression in English primary care". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002183.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A, Smeeth, L and Strongman, H (2021). Codelists for: "Underlying cardiovascular risk and major adverse cardiovascular events after acute respiratory infection: a population-based cohort study of over 4.2 million individuals in England, 2008-2018". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002240.

Muzambi, R, Bhaskaran, K, Smeeth, L and Warren-Gash, C (2021). Codelists for: "Common infections and incident dementia: a historical cohort study using UK primary and secondary care data". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002073.

Data Collection

Gibson, AJ, Passmore, IJ, Faulkner, V, Xia, D, Nobeli, I, Stiens, J, Willcocks, S, Clark, TG, Sobkowiak, B, Werling, D, Villarreal-Ramos, B, Wren, BW and Kendall, SL (2021). Table_1_Probing Differences in Gene Essentiality Between the Human and Animal Adapted Lineages of the Mycobacterium tuberculosis Complex Using TnSeq.XLSX. [Data Collection]. Frontiers. https://doi.org/10.3389/fvets.2021.760717.s002

Udosen, B, Soremekun, O, Ekenna, C, Idowu Omotuyi, O, Chikowore, T, Nashiru, O and Fatumo, S (2021). Additional file 1 of In-silico analysis reveals druggable single nucleotide polymorphisms in angiotensin 1 converting enzyme involved in the onset of blood pressure. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17305518.v1

Walls, H (2021). MalawiFoodSystems_Household_and_individual surveys. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/25NOFK

Rasoanaivo, TF, Bourner, J, Randriamparany, RN, Gamana, TM, Andrianaivoarimanana, V, Raherivelo, MH, Randriamampionona, H, Rajerison, M, Raberahona, M, Salam, AP, Edwards, T, Olliaro, PL and Randremanana, RV (2021). Data for: "The impact of COVID-19 on clinical research for Neglected Tropical Diseases (NTDs): A case study of bubonic plague". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010064.s001

Davidson, JA, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Gold - HIV. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002695.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Gold - aplastic anaemia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002681.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Gold - bone marrow or stem cell transplant. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002683.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Gold - chemotherapy and radiotherapy. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002684.

Cadogan, S and Warren-Gash, C (2021). Clinical codelist - CPRD Gold - chronic kidney disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002686.

Cadogan, S and Warren-Gash, C (2021). Clinical codelist - CPRD Gold - chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002685.

Forbes, H and Strongman, H (2021). Clinical codelist - CPRD Gold - chronic obstructive pulmonary disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002687.

Warren-Gash, C (2021). Clinical codelist - CPRD Gold - dementia diagnoses and administrative codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002688.

Warren-Gash, C (2021). Clinical codelist - CPRD Gold - dementia diagnoses and subtypes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002689.

Warren-Gash, C (2021). Clinical codelist - CPRD Gold - depression. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002690.

Warren-Gash, C (2021). Clinical codelist - CPRD Gold - diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002691.

Warren-Gash, C (2021). Clinical codelist - CPRD Gold - eye conditions acute and chronic. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002692.

Forbes, H (2021). Clinical codelist - CPRD Gold - haematological malignancies. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002693.

Lowe, K, Mansfield, KE, Demenestri, A and Smeeth, L (2021). Clinical codelist - CPRD Gold - harmful alcohol use. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002694.

Shiekh, S, Cadogan, S and Warren-Gash, C (2021). Clinical codelist - CPRD Gold - herpes simplex. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002696.

Forbes, H (2021). Clinical codelist - CPRD Gold - herpes zoster. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002710.

Mansfield, KE (2021). Clinical codelist - CPRD Gold - hypertension. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002697.

Mansfield, KE (2021). Clinical codelist - CPRD Gold - ischaemic heart disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002701.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Gold - other immunodeficiency conditions. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002703.

Davidson, J, Warren-Gash, C and McDonald, H (2021). Clinical codelist - CPRD Gold - permanent immunodeficiency conditions. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002704.

Davidson, J, Warren-Gash, C and McDonald, H (2021). Clinical codelist - CPRD Gold - solid organ transplant. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002709.

Warren-Gash, C (2021). Clinical codelist - CPRD Gold - stroke. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002705.

Muzambi, R and Warren-Gash, C (2021). Clinical codelist - CPRD Gold - traumatic brain injury. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002706.

Grant-McAuley, W, Klock, E, Laeyendecker, O, Piwowar-Manning, E, Wilson, E, Clarke, W, Breaud, A, Moore, A, Ayles, H, Kosloff, B, Shanaube, K, Bock, P, Mandla, N, van Deventer, A, Fidler, S, Donnell, D, Hayes, R and Eshleman, SH (2021). Evaluation of multi-assay algorithms for identifying individuals with recent HIV infection: HPTN 071 (PopART). Minimum dataset, seroconverters. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0258644.s004

Forbes, H (2021). Therapy codelist - Antiviral codes for zoster treatment. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002682.

Davidson, J, Warren-Gash, C and McDonald, H (2021). Therapy codelist - CPRD Gold - immunosuppressants. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002717.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Therapy codelist - CPRD Gold - oral steroids. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002702.

Forbes, H (2021). Therapy codelist - CPRD Gold - topical eye antibiotics. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002707.

Forbes, H (2021). Therapy codelist - CPRD Gold - topical eye antivirals. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002708.

Walls, H (2021). MalawiFoodSystems_Discrete_choice_experiment. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/YKVPR8

Walls, H (2021). MalawiFoodSystems_Focus_group_discussions. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/OYFWV2

Walls, H (2021). MalawiFoodSystems_Food_market_survey. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NSAK0H

Walls, H (2021). MalawiFoodSystems_Key_informant_interviews. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/ITSFRS

Kayiga, H, Genevive, DA, Amuge, PM, Ssemata, AS, Nanzira, RS and Nakimuli, A (2021). Lived experiences of frontline healthcare providers offering maternal and newborn services amidst the novel corona virus disease 19 pandemic in Uganda: A qualitative study. S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0259835.s001

Chapman, LAC, Barnard, RC, Russell, TW, Abbott, S, Van Zandvoort, K, Davies, NG and Kucharski, AJ (2021). Unexposed populations and potential COVID-19 burden in European countries as of 21st November 2021. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5772162

Malla, L, Langat, R and Akech, S (2021). CIN paediatric admissions. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/C0CDP9

Holt, KE, Gorrie, C and Wyres, K (2021). Genome assemblies and pan-genome data for 328 clinical isolates of Klebsiella pneumoniae species complex, representing one year of infections diagnosed in a hospital diagnostic lab. [Data Collection]. Monash University. https://doi.org/10.26180/16811344

Seeley, J (2021). Lending a hand: developing a support structure for young migrants in South Africa and Uganda. [Data Collection]. AHRI Data Repository. https://doi.org/10.23664/AHRI.LENDINGAHAND.ANALYTICALDATA.2021.V1

Nyaguthii, DM, Otieno, GP, Kombe, IK, Koech, D, Mutunga, M, Medley, GF, Nokes, DJ and Munywoki, PK (2021). Replication Data for: Infection patterns of endemic human coronaviruses in rural households in coastal Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/CPJ9B4

Quinn, AK, Williams, KN, Thompson, LM, Harvey, SA, Piedrahita, R, Wang, J, Quinn, C, Pillarisetti, A, McCracken, JP, Rosenthal, JP, Kirby, MA, Diaz Artiga, A, Thangavel, G, Rosa, G, Miranda, JJ, Checkley, W, Peel, JL and Clasen, TF (2021). Replication Data for: Fidelity and Adherence to a Liquefied Petroleum Gas Stove and Fuel Intervention during Gestation: The Multi-Country Household Air Pollution Intervention Network (HAPIN) Randomized Controlled Trial. [Data Collection]. UNC Dataverse. https://doi.org/10.15139/S3/9DDEAW

Soremekun, O, Soremekun, C, Machipisa, T, Soliman, M, Nashiru, O, Chikowore, T and Fatumo, S (2021). Genome-Wide Association and Mendelian Randomization Analysis Reveal the Causal Relationship Between White Blood Cell Subtypes and Asthma in Africans. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.3389/fgene.2021.749415.s001

Smith, KG, Scheelbeek, P, Balmford, A and Garnett, EE (2021). Research data supporting "Discrepancies between two long-term dietary datasets in the United Kingdom (UK)". [Data Collection]. University of Cambridge, Cambridge, United Kingdom. https://doi.org/10.17863/CAM.78207

Evans, B and Jombart, T (2021). Analysis of changes in worldwide routine immunisation coverage in 2020. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5746754

Kamau, A, Paton, RS, Akech, S, Mpimbaza, A, Khazenzi, C, Ogero, M, Mumo, E, Alegana, VA, Agweyu, A, Mturi, N, Mohammed, S, Bigogo, G, Audi, A, Kapisi, J, Sserwanga, A, Namuganga, JF, Kariuki, S, Otieno, NA, Nyawanda, BO, Olotu, A, Salim, N, Athuman, T, Abdulla, S, Mohamed, AF, Mtove, G, Reyburn, H, Gupta, S, Lourenço, J, Bejon, P and Snow, RW (2021). Replication Data for: Malaria hospitalisation in East Africa: age, phenotype and transmission intensity. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/CFYACQ

Springmann, M and Freund, F (2021). Supplementary data to "Options for reforming agricultural subsidies from health, climate, and economic perspectives". [Data Collection]. Oxford University Research Archive, Oxford, United Kingdom. https://doi.org/10.5287/bodleian:QmzkJxaYZ

Abotsi, RE, Nicol, MP, McHugh, G, Simms, V, Rehman, AM, Barthus, C, Ngwira, LG, Kwambana-Adams, B, Heyderman, RS, Odland, JØ, Ferrand, RA and Dube, FS (2021). Data from: The impact of long-term azithromycin on antibiotic resistance in HIV-associated chronic lung disease. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.5dv41ns71

Muleya, M and Salter, A (2021). Ileal amino acid digestibility and DIAAS values of world foods. [Data Collection]. Mendeley Data. https://doi.org/10.17632/gz3cx7d5f4.1

Stoner, MCD, Kilburn, K, Godfrey-faussett, P, Ghys, P and Pettifor, AE (2021). Supporting files for "Cash transfers for HIV prevention: A systematic review". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for South Africa Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/17XS9I

Zhu, J, Zhao, H, Chen, D, Tse, LA, Kinra, S and Li, Y (2021). DataSheet_1_Genetic Correlation and Bidirectional Causal Association Between Type 2 Diabetes and Pulmonary Function.xlsx. [Data Collection]. Frontiers. https://doi.org/10.3389/fendo.2021.777487.s001

Ling, S (2021). supingling/overtreatment. [Data Collection]. Github. https://github.com/supingling/overtreatment

Band, G, Leffler, EM, Jallow, M, Sisay-Joof, F, Ndila, CM, Macharia, AW, Hubbart, C, Jeffreys, AE, Rowlands, K, Nguyen, T, Goncalves, SM, Ariani, CV, Stalker, J, Pearson, RD, Amato, R, Drury, E, Sirugo, G, D'Alessandro, U, Bojang, KA, Marsh, K, Peshu, N, Conway, DJ, Williams, TN, Rockett, KA and Kwiatkowski, DP (2021). Sample accession list for "Malaria protection due to sickle haemoglobin depends on parasite genotype". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5723515

Band, G, Leffler, EM, Jallow, M, Sisay-Joof, F, Ndila, CM, Macharia, AW, Hubbart, C, Jeffreys, AE, Rowlands, K, Nguyen, T, Goncalves, SM, Ariani, CV, Stalker, J, Pearson, RD, Amato, R, Drury, E, Sirugo, G, D'Alessandro, U, Bojang, KA, Marsh, K, Peshu, N, Conway, DJ, Williams, TN, Rockett, KA and Kwiatkowski, DP (2021). Summary statistics for association tests between human and Plasmodium falciparum genetic variants in 3,346 severe malaria cases from The Gambia and Kenya. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5722497

Gibb, R and Mollentze, N (2021). rorygibb/pathogen_discovery: Viral discovery Biology Letters code. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5714490

Page, AE, Dyble, M, Migliano, AB, Viguier, S, Hassan, A and Major-Smith, D (2021). Sedentarisation and maternal childcare networks: role of risk, gender and demography. [Data Collection]. OSF. https://osf.io/5cghy

Cunha, MG, Silva, ES, Sepúlveda, N, Costa, SPT, Saboia, TC, Guerreiro, JF, Póvoa, MM, Corran, PH, Riley, E and Drakeley, CJ (2021). Serologically Defined Variations in Malaria Endemicity in Pará State, Brazil. Supplementary dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0260513.s001

Langdon, RJ, Yousefi, P, Relton, CL and Suderman, MJ (2021). Additional file 1 of Epigenetic modelling of former, current and never smokers. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17037798.v1

Langdon, RJ, Yousefi, P, Relton, CL and Suderman, MJ (2021). Additional file 4 of Epigenetic modelling of former, current and never smokers. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17037810.v1

Lee, SA, Economou, T, de Castro Catão, R, Barcellos, C and Lowe, R (2021). Data and R code to accompany 'The impact of climate suitability, urbanisation, and connectivity on the expansion of dengue in 21st century Brazil' (version 1.0.0). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5710715

Cleary, F, Nitsch, D and Prieto, D (2021). Raw data for a systematic review of statistical methodologies to evaluate progression of chronic kidney disease using electronic healthcare records. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002628.

Shulman, CE, Dorman, EK, Cutts, F, Kawuondo, K, Bulmer, JN, Peshu, N and Marsh, K (2021). Replication Data for: Malaria in pregnancy: adverse effects on haemoglobin levels and birthweight in primigravidae and multigravidae. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/HP1JYJ

Otiende, M, Bauni, E, Nyaguara, A, Amadi, D, Nyundo, C, Tsory, E, Walumbe, D, Kinuthia, M, Kihuha, N, Kahindi, M, Nyutu, G, Moisi, J, Deribew, A, Agweyu, A, Marsh, K, Tsofa, B, Bejon, P, Bottomley, C, Williams, TN and Scott, JAG (2021). Replication Data for: Mortality in rural coastal Kenya measured using the Kilifi Health and Demographic Surveillance System: a 16-year descriptive analysis. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/DDX7OK

Amoah, J, Said, S, Rampal, L, Manaf, R, Ibrahim, N, Owusu-Agyei, S and Poku Asante, K (2021). Effects of a school-based intervention to reduce cardiovascular disease risk factors among secondary school students: A cluster-randomized, controlled trial. Working dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0259581.s003

University of Glasgow, MRC/CSO Social and Public Health Sciences, University College London and London School of Hygiene and Tropical Medicine (2021). National Survey of Sexual Attitudes and Lifestyles COVID-19 Study, 2020. [Data Collection]. UK Data Service. http://doi.org/10.5255/UKDA-SN-8865-1

Brellier, F (2021). Diagnosis codelist - Lyme disease codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002624.

Brellier, F (2021). Diagnosis/symptom codelist - fatigue codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002623.

Damilola R. Oresegun, Peter Thorpe, Benavente, E, Campino, S, Fauzi Muh, Moon, RW, Clark, T and Cox-Singh, J (2021). Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5598263

Robinson, A, Reis de Oliveira Gomes, L, Abdurahman, OS, Alemayehu, W, Shuka, G, Melese, E, Guye, M, Legesse, D, Elias, E, Temam, K, Korso, HK, Muluadam, AA, Virginia, S, Lambert, S, Walker, SL, Habtamu, E, Solomon, AS, Last, AR, Macleod, D, Burton, MJ and Logan, JG (2021). Primary and secondary measurements collected when trialling use of insecticide-treated scarves to protect against Musca sorbens. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002423.

Smeeth, L, Perkins, A and Williamson, E (2021). StatinWISE study data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001695.

Stubbs, T, Kentikelenis, A, Stuckler, D, Mckee, M and King, L (2021). Replication Data for: "The impact of IMF conditionality on government health expenditure: A cross-national analysis of 16 West African nations". [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/BCMAV5

Barasa, E, Musiega, A, Hanson, K, Nyawira, L, Mulwa, A, Molyneux, S, Maina, I, Tsofa, B, Normand, C and Jemutai, J (2021). Additional file 1 of Level and determinants of county health system technical efficiency in Kenya: two stage data envelopment analysis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17132986.v1

Muzambi, R (2021). Clinical codelist - Anxiety and depression ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002577.

Muzambi, R (2021). Clinical codelist - Anxiety and depression Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002576.

Muzambi, R (2021). Clinical codelist - Asthma Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002578.

Muzambi, R (2021). Clinical codelist - Chronic Kidney Disease ICD-10. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002581.

Muzambi, R (2021). Clinical codelist - Chronic Kidney Disease Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002580.

Muzambi, R (2021). Clinical codelist - Chronic Liver Disease ICD-10. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002583.

Muzambi, R (2021). Clinical codelist - Chronic Liver Disease Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002582.

Muzambi, R (2021). Clinical codelist - Chronic Obstructive Pulmonary Disease ICD-10. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002587.

Muzambi, R (2021). Clinical codelist - Chronic Obstructive Pulmonary Disease Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002586.

Muzambi, R (2021). Clinical codelist - Cognitive impairment exclusion ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002585.

Muzambi, R (2021). Clinical codelist - Cognitive impairment exclusion Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002584.

Muzambi, R (2021). Clinical codelist - Dementia exclusion ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002589.

Muzambi, R (2021). Clinical codelist - Dementia exclusion Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002588.

Muzambi, R (2021). Clinical codelist - Diabetes ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002591.

Muzambi, R (2021). Clinical codelist - Diabetes Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002590.

Muzambi, R (2021). Clinical codelist - Heart failure ICD-10. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002593.

Muzambi, R (2021). Clinical codelist - Heart failure Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002592.

Muzambi, R (2021). Clinical codelist - Hypertension ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002595.

Muzambi, R (2021). Clinical codelist - Hypertension Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002594.

Muzambi, R (2021). Clinical codelist - Inflammatory Bowel Disease ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002597.

Muzambi, R (2021). Clinical codelist - Inflammatory Bowel Disease Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002596.

Muzambi, R (2021). Clinical codelist - Lower respiratory tract infections ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002599.

Muzambi, R (2021). Clinical codelist - Lower respiratory tract infections Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002598.

Muzambi, R (2021). Clinical codelist - Multiple Sclerosis ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002601.

Muzambi, R (2021). Clinical codelist - Multiple Sclerosis Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002600.

Muzambi, R (2021). Clinical codelist - Obstructive sleep opnoea ICD-10. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002603.

Muzambi, R (2021). Clinical codelist - Obstructive sleep opnoea Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002602.

Muzambi, R (2021). Clinical codelist - Psoriasis ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002605.

Muzambi, R (2021). Clinical codelist - Psoriasis Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002604.

Muzambi, R (2021). Clinical codelist - Rhematoid Arthritis ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002607.

Muzambi, R (2021). Clinical codelist - Rheumatoid Arthritis Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002606.

Muzambi, R (2021). Clinical codelist - Sepsis ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002609.

Muzambi, R (2021). Clinical codelist - Sepsis Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002608.

Muzambi, R (2021). Clinical codelist - Severe mental illness Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002610.

Muzambi, R (2021). Clinical codelist - Skin and soft tissue infections ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002613.

Muzambi, R (2021). Clinical codelist - Skin and soft tissue infections Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002612.

Muzambi, R (2021). Clinical codelist - Stroke ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002615.

Muzambi, R (2021). Clinical codelist - Stroke Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002614.

Muzambi, R (2021). Clinical codelist - Traumatic brain injury ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002617.

Muzambi, R (2021). Clinical codelist - Traumatic brain injury Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002616.

Muzambi, R (2021). Clinical codelist - Urinary tract infections ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002619.

Muzambi, R (2021). Clinical codelist - Urinary tract infections Read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002618.

Muzambi, R (2021). Clinical codelist - asthma ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002579.

Muzambi, R (2021). Therapy codelist - Antibiotics BNF/dm+d/read v2 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002574.

Muzambi, R (2021). Therapy codelist - Anxiety and depression BNF/dm+d/Read v2 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002575.

Muzambi, R (2021). Therapy codelist - Severe mental illness ICD-10 codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002611.

Lynham, S and Dawson, L (2021). C. difficle p-cresol production. [Data Collection]. ProteomeXchange. http://proteomecentral.proteomexchange.org/PXD028948

Borghi, J, Binyaruka, P, Mayumana, I, Lange, S, Somville, V and Maestad, O (2021). Long term effects of payment for performance on maternal and child health outcomes– evidence from Tanzania. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5636645

Mowbray, CE, Braillard, S, Glossop, PA, Whitlock, GA, Jacobs, RT, Speake, J, Pandi, B, Nare, B, Maes, L, Yardley, V, Freund, Y, Wall, RJ, Carvalho, S, Bello, D, Van den Kerkhof, M, Caljon, G, Gilbert, IH, Corpas-Lopez, V, Lukac, I, Patterson, S, Zuccotto, F and Wyllie, S (2021). DNDI-6148: A Novel Benzoxaborole Preclinical Candidate for the Treatment of Visceral Leishmaniasis. [Data Collection]. ACS Publications, Washington, DC, USA. https://doi.org/10.1021/acs.jmedchem.1c01437.s004

Pray, IW, Pizzitutti, F, Bonnet, G, Gonzales-Gustavson, E, Wakeland, W, Pan, WK, Lambert, WE, Gonzalez, AE, Garcia, HH and O’Neal, SE (2021). Data file including CystiAgent simulation results, observed results from the Ring Strategy Trial, and all intervention settings for each village evaluated (n = 21 villages). [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009885.s002

Ssali, A, Pickering, L, Nalwadda, E, Mujumbusi, L, Seeley, J and Lamberton, PHL (2021). Raw data on messaging, extracted and anonymised after coding. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009893.s003

Endo, A, Uchida, M, Hayashi, N, Liu, Y, Atkins, KE, Kucharski, AJ and Funk, S (2021). akira-endo/schooldynamics_FluMatsumoto14-15: Within and between classroom transmission patterns of seasonal influenza among primary school students in Matsumoto city, Japan. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5604502

Isac, S, Javalkar, P, Platt, L, Watts, C and Heise, L (2021). Samvedana Plus: Reducing Violence and Increasing Condom Use in the Intimate Partnerships of female Sex Workers in Bagalkote District, North Karnataka, South India. [Data Collection]. MEDAT Data Repository. https://medat.samrc.ac.za/index.php/catalog/37/

Keating, P, Murray, J, Schenkel, K, Merson, L and Seale, A (2021). Support files for: "Electronic data collection, management and analysis tools used for outbreak response in low- and middle-income countries: a systematic review and stakeholder survey". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002527.

Wu, JT, Mei, S, Luo, S, Leung, K, Liu, D, Lv, Q, Liu, J, Li, Y, Prem, K, Jit, M, Weng, J, Feng, T, Zheng, X and Leung, GM (2021). Table S4 from A global assessment of the impact of school closure in reducing COVID-19 spread. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16851696.v1

Murphy, N, Cardinal, MV, Bhattacharyya, T, Enriquez, GF, Macchiaverna, NP, Alvedro, A, Freilij, H, Martinez de Salazar, P, Molina, I, Mertens, P, Gilleman, Q, Gürtler, RE and Miles, MA (2021). Additional file 5 of Assessing antibody decline after chemotherapy of early chronic Chagas disease patients. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16841066.v1

Cohn, S, Borgstrom, E, Driessen, A and Dumble, K (2021). Forms of Care: Ethnographic Interviews About Palliative Care With Health Professionals in London, 2017-2021. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-855055

Galofré-Vilà, G, Meissner, CM, Mckee, M and Stuckler, D (2021). Austerity and the rise of the nazi party. [Data Collection]. Inter-university Consortium for Political and Social Research. https://doi.org/10.3886/E125101V1

Witkowska McConnell, W, Davis, C, Sabir, SR, Garrett, A, Bradley-Stewart, A, Jajesniak, P, Reboud, J, Xu, G, Yang, Z, Gunson, R, Thomson, EC and Cooper, J (2021). Loop mediated isothermal amplification as a powerful tool for early diagnosis of hepatitis C virus. [Data Collection]. University of Glasgow. https://doi.org/10.5525/gla.researchdata.1127

Bauduin, S, Chubaty, A, McIntire, E, Kohli, M and Gruson, H (2021). PredictiveEcology/NetLogoR. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3695051

Kabia, Evelyn, Goodman, C, Balabanova, D, Molyneux, S and Barasa, E (2021). The hidden financial burden of healthcare: a systematic literature review of informal payments in Sub-Saharan Africa. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NMQCSF

Beksinska, A, Jama, Z, Kabuti, R, Kungu, M, Babu, H, Nyariki, E, Shah, P, Gwala, D, Oside, D, Kamene, R, Watata, A, Atieno, A, Njau, F, Njeri, E, Orobi, E, Lwingi, I, Nyabuto, C, Okumu, M, Mahero, A, Ngurukiri, P, Irungu, E, Adhiambo, W, Muthoga, P, Kaul, R, Seeley, J, Beattie, TS, Weiss, HA and Kimani, J (2021). Additional file 1 of Prevalence and correlates of common mental health problems and recent suicidal thoughts and behaviours among female sex workers in Nairobi, Kenya. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16815531.v1

Orindi, BO, Ziraba, A, Bruyneel, L, Floyd, S and Lesaffre, E (2021). Invariance of the WHO violence against women instrument among Kenyan adolescent girls and young women: Bayesian psychometric modeling. S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0258651.s007

Falconer, J and Bonell, C (2021). Search strategies for: Whole-school interventions promoting student commitment to school to prevent substance abuse and violence and improve educational attainment. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002543.

Miranda, JJ, Bernabé-Ortiz, A and Carrillo-Larco, R (2021). PERU MIGRANT Study. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16811350.v3

Yasuda, I, Saito, N, Suzuki, M, Umipig, DV, Solante, RM, Guzman, FD, Sayo, AR, Yasunami, M, Koizumi, N, Kitashoji, E, Sakashita, K, Ng, CFS, Smith, C and Ariyoshi, K (2021). Unique characteristics of new complete blood count parameters, the Immature Platelet Fraction and the Immature Platelet Fraction Count, in dengue patients. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16810771.v1

Chen-hussey, V (2021). Response of Hyalomma marginatum to 20% DEET. [Data Collection]. Mendeley Data. https://doi.org/10.17632/gg5f674w7m.1

Sturgess, J and Dodd, M (2021). Tight K Pilot Study Dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002415.

Prior, KF, Middleton, B, Owolabi, AT, Westwood, ML, Holland, J, O'Donnell, AJ, Blackman, MJ, Skene, DJ and Reece, SE (2021). Blood glucose concentration time series in mice infected with malaria parasites. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14912709.v2

Bell, S, Clarke, R, Mounier-Jack, S, Paterson, P, Ismail, S and Ojo-Aromokudu, O (2021). COVID-19 vaccination beliefs, attitudes, and behaviours among health and social care workers in the UK: Survey dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002525.

Song, J, Brown, MK, Tan, M, MacGregor, GA, Webster, J, Campbell, NRC, Trieu, K, Ni Mhurchu, C, Cobb, LK and He, FJ (2021). Impact of color-coded and warning nutrition labelling schemes: A systematic review and network meta-analysis. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1003765.s021

Engl, M and Kerac, M (2021). Management of at-risk mothers and infants < 6 months in national and international SAM guidelines: AGREE scoring of guidelines and guideline content spreadsheet. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002534.

Springmann, M (2021). Supplementary data to "The global and regional costs of healthy and sustainable dietary patterns: a modelling study". [Data Collection]. University of Oxford, Oxford, United Kingdom. https://doi.org/10.5287/bodleian:bpPJMRzJo

Phillips, D, Gemechu, T, Parry, E, Yacoub, M and Kotit, S (2021). Community-based prevalence of Rheumatic Heart Disease in rural Ethiopia: five-year follow-up. [Data Collection]. University of Southampton, Southampton, United Kingdom. https://doi.org/10.5258/SOTON/D1987

Flaherty, KE, Grembi, JA, Ramachandran, VV, Haque, F, Khatun, S, Rahman, M, Maples, S, Becker, TK, Spormann, AM, Schoolnik, GK, Hryckowian, AJ and Nelson, EJ (2021). High-throughput low-cost nl-qPCR for enteropathogen detection: A proof-of-concept among hospitalized patients in Bangladesh. S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0257708.s004

Richmond, RC, Sillero-Rejon, C, Khouja, JN, Prince, C, Board, A, Sharp, G, Suderman, M, Relton, CL, Munafò, M and Gage, SH (2021). Additional file 2 of Investigating the DNA methylation profile of e-cigarette use. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16696498.v1

Enria, L (2021). Qualitative Data on Integrating Social Science in Community Engagement for Vaccine Hesitancy in Sierra Leone, 2019-2020. [Data Collection]. UK Data Service. https://doi.org/10.5255/ukda-sn-8841-1

Weckman, AM, Conroy, AL, Madanitsa, M, Gnaneswaran, B, McDonald, CR, Kalilani-Phiri, L, Chandna, J, Ali, D, Mwapasa, V, Khairallah, C, Thwai, KL, Meshnick, SR, Taylor, SM, ter Kuile, FO, Kain, KC and Gladstone, M (2021). Neurocognitive outcomes in Malawian children exposed to malaria during pregnancy: An observational birth cohort study. Anonymized dataset, wide format. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1003701.s001

Liao, J, Kirby, MA, Pillarisetti, A, Piedrahita, R, Balakrishnan, K, Sambandam, S, Mukhopadhyay, K, Ye, W, Rosa, G, Majorin, F, Dusabimana, E, Ndagijimana, F, McCracken, JP, Mollinedo, E, de Leon, O, Díaz-Artiga, A, Thompson, LM, Kearns, KA, Naeher, L, Rosenthal, J, Clark, ML, Steenland, K, Waller, LA, Checkley, W, Peel, JL and Clasen, T (2021). Replication Data for: LPG stove and fuel intervention among pregnant women reduce fine particle air pollution exposures in three countries: Pilot results from the HAPIN trial. [Data Collection]. Harvard Dataverse. https://doi.org/10.15139/S3/XSGXUM

Koltai, M (2021). Source data for "Date of introduction and epidemiologic patterns of SARS-CoV-2 in Mogadishu, Somalia: estimates from transmission modelling of satellite-based excess mortality data in 2020". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5534768

Engl, M and Kerac, M (2021). Presence of recommendations for the management of malnourished children living with disabilities in national and international SAM guidelines: Interview transcripts and guideline content spreadsheet. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002513.

Parker, E (2021). eparker12/RoVI: Analysis code and data for RoVI study primary outcomes. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5528336

Diamond, C, Gong, H, Sun, FY, Liu, Y, Quilty, B, Jit, M, Yang, J, Yu, H, Edmunds, WJ and Baguelin, M (2021). EIDECDIA/China_influenza_seasonality. [Data Collection]. Github. https://github.com/EIDECDIA/China_influenza_seasonality

Guevara, PD, Maes, M, Thanh, DP, Duarte, C, Rodriguez, EC, Montaño, LA, Dan, THN, Nguyen, TNT, Carey, ME, Campos, J, Chinen, I, Perez, E and Baker, S (2021). Profile of the organisms selected for sequencing. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009755.s001

Ku, C, MacPherson, P, Khundi, M, Nzawa Soko, RH, Feasey, HRA, Nliwasa, M, Horton, KC, Corbett, EL and Dodd, PJ (2021). Durations of asymptomatic, symptomatic, and care-seeking phases of tuberculosis disease with a Bayesian analysis of prevalence survey and notification data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002633.

Levecke, B, Coffeng, LE, Hanna, C, Pullan, RL and Gass, KM (2021). The data used to determine the required diagnostic performance, the sample size and the corresponding decision cut-offs. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009740.s004

Bottomley, C (2021). christian-bottomley/mixture_model_sarscov2. [Data Collection]. Github. https://github.com/christian-bottomley/mixture_model_sarscov2

Moodley, B, Chinorumba, A, Hamman, C, Matamba, A, Sikaala, CH, Kleinschmidt, I and Frean, J (2021). Additional file 5 of Improving the quality of malaria diagnosis in southern Africa through the development of a regional malaria slide bank. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16590714.v1

Ha, BTT, Ngoc Quang, L, Quoc Thanh, P, Duc, DM, Mirzoev, T and Bui, TMA (2021). Community engagement in the prevention and control of COVID-19: Insights from Vietnam. Qualitative transcripts. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0254432.s002

Beilinson, HA, Glynn, RA, Yadavalli, AD, Xiao, J, Corbett, EL, Saribasak, H, Arya, R, Miot, C, Bhattacharyya, A, Jones, JM, Pongubala, JM, Bassing, CH and Schatz, DG (2021). The RAG1 N-terminal region regulates the efficiency and pathways of synapsis for V(D)J recombination. [Data Collection]. immunoSEQ Analyze. https://doi.org/10.21417/HAB2021JEM

Wigley, S, Holmer, H and Allen, LN (2021). drlukeallen/NCD-Policy-Implementation. [Data Collection]. Github. https://github.com/drlukeallen/NCD-Policy-Implementation

Cox, S and Faguer, B (2021). Patterns of non-communicable comorbidities at start of tuberculosis treatment in three regions of the Philippines: St-ATT cohort baseline data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002476.

Fielding, K (2021). Data set for describing resistance and identifying risk factors for resistance to Mycobacterium tuberculosis, among highly TB exposed gold miners in South Africa. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002424.

Muthui, MK, Takashima, E, Omondi, BR, Kinya, C, Muasya, WI, Nagaoka, H, Mwai, K, Orindi, B, Wambua, J, Bousema, T, Drakeley, C, Blagborough, AM, Marsh, K, Bejon, P and Kapulu, MC (2021). Replication data for: Characterization of naturally acquired immunity to a panel of antigens expressed in mature P. falciparum gametocytes. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/WL8TRW

Gröschel, MI, Owens, M, Freschi, L, Vargas, R, Marin, MG, Phelan, J, Iqbal, Z, Dixit, A and Farhat, MR (2021). Additional file 1 of GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16544185.v1

Fielding, K (2021). Adjunctive host-directed therapies for pulmonary tuberculosis: data from a prospective, open-label, phase 2, randomised controlled trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002277.

Chuengsatiansup, K, Chawraingern, S, Limsawart, W, Urapeepathanapong, T, Chanchamsang, U and Chandler, C (2021). Anti-microbials in Society - Thailand, Study 2, 2017-2021. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-855072

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). Local Estimates of the Covid 19 Reproduction Number (R) for the United Kingdom Based on Deaths. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/UIM3MB

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Canada Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/2CNKZJ

Fabbri, C and Leurent, B (2021). Data for Preventing Violence Against Children in Schools (PVACS) main trial analyses. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002474.

Sringernyuang, L, Whanpuch, P, Poompruek, P and Chandler, C (2021). Anti-microbials In Society - Thailand, Study 1, 2017-2021. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-855071

Blassel, L, Tostevin, A, Villabona-arenas, CJ, Peeters, M, Hue, S and Gascuel, O (2021). Archive of figure generating data. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1008873.s007

Oliveira, MD, Vieira, AL, Dimitrovová, K, Angelis, A, Kanavos, P and Bana e Costa, C (2021). IMPACT HTA, WP7 (Methodological tools using multi-criteria value methods for HTA decision-making), Task 2 (Multi-criteria evaluation framework), Results of the 1st Web-Delphi process to HTA stakeholders, organized into 6 separate parallel panels. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5256671

Oliveira, MD, Dimitrovová, K, Vieira, AL, Angelis, A, Kanavos, P and Bana e Costa, C (2021). IMPACT HTA, WP7 (Methodological tools using multi-criteria value methods for HTA decision-making), Task 2 (Multi-criteria evaluation framework), Results of the 2nd Web-Delphi process to HTA stakeholders, organized in a single panel. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5256844

Okpako, O, Herrick, C and Millington, J (2021). Database of non-communicable disease reports contributing to UN high-level meeting process (2000-2020). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5236439

Abbott, S and Funk, S (2021). epiforecasts/covid19.sgene.utla.rt. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5236661

Tennant, WSD, Cardinale, E, Cêtre-Sossah, C, Moutroifi, Y, Le Godais, G, Colombi, D, Spencer, SEF, Tildesley, MJ, Keeling, MJ, Charafouddine, O, Colizza, V, Edmunds, WJ and Métras, R (2021). wtennant/rvf_comoros: Supporting data and code for 'Modelling the persistence and control of Rift Valley fever virus in a spatially heterogeneous landscape'. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5234876

Rukundo, GZ, Levin, J, Mpango, RS, Patel, V and Kinyanda, E (2021). Effect of suicidality on clinical and behavioural outcomes in HIV positive adults in Uganda. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0254830.s002

Van Zandvoort, K, Bobe, MO, Hassan, AI, Abdi, MI, Ahmed, MS, Warsame, MY, Wais, MA, Diggle, E, Satzke, C, Mulholland, K, Egeh, MM, Hassan, MM, Hergeeye, MA, Eggo, RM, Checchi, F and Flasche, S (2021). Social contact data for IDPs in Somaliland (2019). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5226280

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). Local Estimates of the Covid 19 Reproduction Number (R) for the United Kingdom Based on Admissions. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/0NYGXE

Mccreesh, N, Dlamini, V, Edwards, A, Olivier, S, Dayi, N, Dikgale, K, Nxumalo, S, Dreyer, J, Baisley, K, Siedner, MJ, White, RG, Herbst, K, Grant, AD and Harling, G (2021). Social contact information from PIPSA residents in uMkhanyakude before and during the Covid-19 pandemic – data from the Umoya Omuhle and Covid Social Contacts studies. [Data Collection]. AHRI Data Repository. https://doi.org/10.23664/AHRI.UOANDCSC.DATASET.2021

Du, J, Page, AE and Mace, R (2021). Allocare project. [Data Collection]. OSF. https://osf.io/bh9ya/?view_only=6d201b5a998c4de4820db99e014b8967

Sanya, R and Webb, E (2021). Data supporting "Profiles of inflammation in rural and urban Uganda". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002459.

Naiga, S, Nabirye, C, Kayendeke, M and Chandler, C (2021). Anti-Microbials in Society - Uganda Study, 2017-2021. [Data Collection]. UK Data Service, Colchester, Essex. https://dx.doi.org/10.5255/UKDA-SN-854612

Shaikh, N, McCreesh, N and Deol, A (2021). Data for: "Importance of ventilation and occupancy to Mycobacterium tuberculosis transmission rates in congregate settings". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002427.

Ross, I (2021). Data for: "Sanitation-related Quality of Life (SanQoL) in Maputo, Mozambique". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002442.

Glynn, JR, Fielding, K, Mzembe, T, Sichali, L, Banda, L, Mclean, E, Kanjala, C, Crampin, AC, Ponnighaus, J, Warndorff, D and Fine, P (2021). Data for: “BCG revaccination in Malawi: 30-year follow-up of a large, randomised, double-blind placebo-controlled trial”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002443.

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Impact of the DREAMS interventions on educational attainment among adolescent girls and young women: Causal analysis of a prospective cohort in urban Kenya. Analytical datasets. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0255165.s012

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Number and proportions of AGYW aged 15–22 years retained in the study vs those lost to follow up at endline (2019), by AGYW characteristics. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0255165.s008

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Number of interventions accessed by age group, schooling status at baseline, and invitation to DREAMS. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0255165.s009

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Results from sensitivity analysis for associations between DREAMS and educational attainment. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0255165.s011

Drake, C, Hernandez, A, Liu, Y, Schwartz, AH and Sundaram, M (2021). yangclaraliu/armslist_scraping. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5185707

Nampijja, M, Sembajjwe, W, Mpango, RS, Mpairwe, H, Kinyanda, E, Edward, J and Ayikoru, T (2021). CHAKA-SONA Normative dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002434.

Lubyayi, L and Webb, E (2021). EMaBS 1 to 5 years illness data and ARD outcomes at 9 years. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002438.

De figueiredo, A (2021). Impact of vaccine passports on inclination to accept COVID-19 vaccinations in the UK. [Data Collection]. OSF. https://osf.io/xh9p7/

Moyano, LM, Montano, SM, Vilchez Barreto, P, Reto, N, Larrauri, L, Mori, N, Cornejo-Olivas, M, Guevara-Silva, E, Urizar, F, Najar, E, Gamboa, R, Azabache, C, Herrer Ticse, R, Bolivar-Herrada, L, Doud, A, Martinez, P, Miranda, JJ, Zunt, JR and García, HH (2021). Prevalence of stroke survival in rural communities living in northern Peru. S1 Data. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0254440.s001

Wong, A, Bacon, S, Walker, A, Davy, S, Inglesby, P and MacKenna, B (2021). opensafely/anticoagulants-research. [Data Collection]. Github. https://github.com/opensafely/anticoagulants-research

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Greece). [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.5137218

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Slovenia). [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.5137239

Beilinson, H, Yadavalli, A, Xiao, J, Corbett, L, Saribasak, H and Schatz, D (2021). The RAG1 N-terminal region regulates the efficiency and pathways of synapsis for V(D)J recombination. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE180734

Chowdhury, S, Pozzer, A, Haines, A, Klingmüller, K, Münzel, T, Paasonen, P, Sharma, A, Venkataraman, C and Lelieveld, J (2021). Global health burden of ambient PM2.5 and the role of anthropogenic black carbon and organic aerosols. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5131659

Kansiime, S (2021). Blood pressure levels among children in rural Uganda: results from 1,913 children in a general population survey. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002387.

Matos, GM, Lewis, MD, Talavera-López, C, Yeo, M, Grisard, EC, Messenger, LA, Miles, MA and Andersson, B (2021). Comparative genomic analyses of Trypanosoma cruzi experimental hybrids. [Data Collection]. NCBI BioProject. https://www.ncbi.nlm.nih.gov/bioproject/PRJNA748998

Oxborough, RM, Seyoum, A, Yihdego, Y, Chabi, J, Wat’senga, F, Agossa, FR, Coleman, S, Musa, SL, Faye, O, Okia, M, Bayoh, M, Alyko, E, Rakotoson, J, Masendu, H, Sovi, A, Gadiaga, L, Abong’o, B, Opondo, K, Baber, I, Dabire, R, Gnanguenon, V, Yohannes, G, Varela, K, Fondjo, E, Carlson, J, Armistead, JS and Dengela, D (2021). Additional file 1 of Determination of the discriminating concentration of chlorfenapyr (pyrrole) and Anopheles gambiae sensu lato susceptibility testing in preparation for distribution of Interceptor® G2 insecticide-treated nets. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14984900.v1

Oxborough, RM, Seyoum, A, Yihdego, Y, Chabi, J, Wat’senga, F, Agossa, FR, Coleman, S, Musa, SL, Faye, O, Okia, M, Bayoh, M, Alyko, E, Rakotoson, J, Masendu, H, Sovi, A, Gadiaga, L, Abong’o, B, Opondo, K, Baber, I, Dabire, R, Gnanguenon, V, Yohannes, G, Varela, K, Fondjo, E, Carlson, J, Armistead, JS and Dengela, D (2021). Additional file 2 of Determination of the discriminating concentration of chlorfenapyr (pyrrole) and Anopheles gambiae sensu lato susceptibility testing in preparation for distribution of Interceptor® G2 insecticide-treated nets. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14984906.v1

Wyres, KL, Hawkey, J, Mirčeta, M, Judd, LM, Wick, RR, Gorrie, CL, Pratt, NF, Garlick, JS, Watson, KM, Pilcher, DV, McGloughlin, SA, Abbott, IJ, Macesic, N, Spelman, DW, Jenney, AWJ and Holt, KE (2021). Additional file 2 of Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14984870.v1

Oxborough, RM, Seyoum, A, Yihdego, Y, Chabi, J, Wat’senga, F, Agossa, FR, Coleman, S, Musa, SL, Faye, O, Okia, M, Bayoh, M, Alyko, E, Rakotoson, J, Masendu, H, Sovi, A, Gadiaga, L, Abong’o, B, Opondo, K, Baber, I, Dabire, R, Gnanguenon, V, Yohannes, G, Varela, K, Fondjo, E, Carlson, J, Armistead, JS and Dengela, D (2021). Additional file 3 of Determination of the discriminating concentration of chlorfenapyr (pyrrole) and Anopheles gambiae sensu lato susceptibility testing in preparation for distribution of Interceptor® G2 insecticide-treated nets. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14984909.v1

Davies, NG (2021). CSV-format data for: Increased mortality in community-tested cases of SARS-CoV-2 lineage B.1.1.7. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5105920

Niles, RA, Thickstun, CR, Cox, H, Dilliott, D, Burgert-Brucker, CR, Harding-Esch, EM, Clementson, N, Sampson, A, Alexandre, JS, Morice Trejos, AC, Scholte, RGC and Krentel, A (2021). Community Survey of Lymphatic Filariasis Mass Drug Administration Acceptability in Guyana, August 2019. [Data Collection]. UNC Dataverse. https://doi.org/10.15139/S3/VIOTDL

Cresswell, F and Quinn, C (2021). Neurocognitive outcomes of HIV-associated tuberculous meningitis dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002372.

Weiss, H and Bhat, B (2021). PRIDE 12 month outcome dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002147.

Wilkinson, KA, Maokola, WM, Ngowi, BJ, Mahande, MJ, Todd, J, Robert, M and Msuya, SE (2021). Impact of Isoniazid Preventive Therapy on Tuberculosis incidence among people living with HIV: A secondary data analysis using Inverse Probability Weighting of individuals attending HIV care and treatment clinics in Tanzania. S1 Dataset. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0254082.s001

Marchant, T (2021). Maternal and newborn health project in Gombe state, northeast Nigeria. Data from clinical observations, exit interviews, follow up surveys between 2016 and 2019. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001709.

Marchant, T (2021). Maternal and newborn health project in Gombe state, northeast Nigeria. Data from household, health facility and birth attendant surveys between 2015 and 2019. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001712.

Torraca, V, Sommer, F, In 't Veld, AE, Willemse, J and Meijer, AH (2021). RNAseq expression analysis of FACS-sorted macrophages from cxcr3.2 mutant and wt zebrafish larvae. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE149942

Uyoga, S, Adetifa, IM, Otiende, M, Gitonga, JN, Mugo, D, Nyagwange, J, Karanja, HK, Tuju, J, Makale, J, Aman, R, Mwangangi, M, Amoth, P, Kasera, K, Ng’ang’a, W, Chege, E, Yegon, C, Kithi, K, Odhiambo, E, Rotich, T, Orgut, I, Kihara, S, Bottomley, C, Kagucia, EW, Gallagher, KE, Etyang, A, Voller, S, Lambe, T, Wright, D, Barasa, E, Tsofa, B, Mwangangi, J, Bejon, P, Ochola-Oyier, LI, Warimwe, GM, Agweyu, A and Scott, JAG (2021). Replication Data for: Prevalence of SARS-CoV-2 Antibodies from a one-year National Serosurveillance of Kenyan Blood Transfusion Donors. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/3E1YSQ

Pearson, CAB, Bozzani, F, Procter, SR, Davies, NG, Huda, M, Jensen, HT, Keogh-Brown, M, Khalid, M, Sweeney, S, Torres-Rueda, S, Eggo, RM, Vassall, A and Jit, M (2021). Simulation results for "COVID-19 vaccination in Sindh Province, Pakistan: a modelling study of health impact and cost-effectiveness". [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.5070957

Sturt, A, Webb, E and Bustinduy, A (2021). Data for: "Association of Female Genital Schistosomiasis with the Cervicovaginal Microbiota and Sexually Transmitted Infections in Zambian Women". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002340.

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Denmark). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5040530

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (France). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5040870

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Italy). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5041112

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Poland). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5041128

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Portugal). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5041140

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Spain). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5040839

Rujumba, J, Homsy, J, Bannink, F, Namukwaya, Z, Amone, A, Rukundo, G, Katabira, E, Byamugisha, J, Fowler, MG and King, RL (2021). Interview excerpts by major themes and sub-themes perceptions of HIV self-testing in Kampala. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0253616.s003

Roberts, C, Brindle, H, Rogers, N, Eggo, RM, Enria, L and Lees, S (2021). Data for: "Vaccine Confidence and Hesitancy at the start of COVID-19 vaccine deployment in the UK: An embedded mixed-methods study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002337.

Abbott, S, Hickson, J, Badr, HS, Funk, S, Monticone, P, Ellis, P, Munday, JD, Allen, J, Pearson, CAB, DeWitt, M, Bosse, N and Meakin, S (2021). epiforecasts/EpiNow2. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3957489

Spadar, A, Phelan, J, Diez-Benavente, E, Campos, M, Gomez, LF, Mohareb, F, Clark, TG and Campino, S (2021). Data for: "Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002482.

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Colombia Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/GI8EVP

Prior, KF, Middleton, B, Owolabi, AT, Westwood, ML, Holland, J, O'Donnell, AJ, Blackman, MJ, Skene, DJ and Reece, SE (2021). Plasmodium chabaudi genotype DK parasite stages during time series. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14842695.v1

Prior, KF, Middleton, B, Owolabi, AT, Westwood, ML, Holland, J, O'Donnell, AJ, Blackman, MJ, Skene, DJ and Reece, SE (2021). Plasmodium schizont densities in culture grown with and without isoleucine, as well as isoleucine starvation for different durations of time. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14842716.v1

Prior, KF, Middleton, B, Owolabi, AT, Westwood, ML, Holland, J, O'Donnell, AJ, Blackman, MJ, Skene, DJ and Reece, SE (2021). Plasmodium schizont proportion in culture grown with and without isoleucine. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14842713.v1

Prior, KF, Middleton, B, Owolabi, AT, Westwood, ML, Holland, J, O'Donnell, AJ, Blackman, MJ, Skene, DJ and Reece, SE (2021). Targeted metabolomics on malaria-infected mouse blood. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14842638.v1

Lay, C, Chu, CW, Purbojati, RW, Acerbi, E, Drautz-Moses, DI, de Sessions, PF, Jie, S, Ho, E, Kok, YJ, Bi, X, Chen, S, Mak, SY, Chua, MC, Goh, AEN, Chiang, WC, Rao, R, Chaithongwongwatthana, S, Khemapech, N, Chongsrisawat, V, Martin, R, Koh, Y, Lohar, SR, Tan, ICH, Anng, WA, Jie, C, Bartke, N, Ben-Amor, K, Renes, IB, Wong, F, Roeselers, G, Ho, YS, Hibberd, ML, Schuster, SC and Knol, J (2021). Data for: "A synbiotic intervention modulates meta-omics signatures of gut redox potential and acidity in elective caesarean born infants". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Cadogan, S and Warren-Gash, C (2021). Codelists for: "Anticoagulant prescribing in atrial fibrillation and incident dementia: a UK population-based cohort study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002326.

Herrett, E (2021). Codelists for: "Understanding thresholds of blood pressure and predicted cardiovascular disease risk in guiding blood pressure treatment: a cohort study in English primary care". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002271.

Sturt, A, Rafferty, H and Bustinduy, A (2021). Data for: "Association between cervical dysplasia and female genital schistosomiasis diagnosed by genital PCR in Zambian women". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002282.

Hamid-Adiamoh, M, Nwakanma, D, Assogba, SB, Ndiath, MO, D'Alessandro, U, Afrane, YA and Amambua-Ngwa, A (2021). Overall data including separate worksheets for genotypic resistance and species genotypes; host blood meal and sporozoite positivity data. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0241023.s001

Kazibwe, J, Tran, PB and Annerstedt, KS (2021). Additional file 1 of The household financial burden of non-communicable diseases in low- and middle-income countries: a systematic review. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14820890.v1

Gibbs, H, Waterlow, NR, Cheshire, J, Danon, L, Liu, Y, Grundy, C, Kucharski, AJ and Eggo, RM (2021). Population disruption: estimating changes in population distribution in the UK during the COVID-19 pandemic - Estimates for Local Authority Districts. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5013619

Pavanello, F, De Cian, E, Davide, M, Mistry, M, Cruz, TB, Bezerra, PdS, Jagu, D, Renner, S, Schaffer, R and Lucena, AFP (2021). Data for: Air-Conditioning and the Adaptation Cooling Deficit in Emerging Economies, Pavanello et al 2021. [Data Collection]. Mendeley Data. https://doi.org/10.17632/ws7cmwbnfg.1

Glazik, R (2021). Data supporting "A Snapshot of the Practicality of, and Barriers to, Implementation of COVID-19 Interventions: Public Health and Healthcare Workers' Perceptions". [Data Collection]. London School of Hygiene and Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002321.

Fujisawa, K, Silcott-Niles, C, Simonson, P, Lamattina, D, Humeres, CA, Bhattacharyya, T, Mertens, P, Thunissen, C, O’Rourke, V, Pańczuk, M, Whitworth, JA, Salomón, OD and Miles, MA (2021). Consolidated results of dogs in the 2018 and 2019 studies. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009552.s001

Mutua, MK, Wado, YD, Malata, M, Kabiru, CW, Akwara, E, Melesse, DY, Fall, NA, Coll, CVN, Faye, C and Barros, AJD (2021). Additional file 1 of Wealth-related inequalities in demand for family planning satisfied among married and unmarried adolescent girls and young women in sub-Saharan Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14795557.v1

Berrang-Ford, L, Sietsma, AJ, Callaghan, M, Minx, J, Scheelbeek, P, Haddaway, N, Haines, A and Dangour, AD (2021). Dataset for article Berrang-Ford et al. "Systematic mapping of global research on climate and health using machine learning" The Lancet Planetary Health. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4972514

Woodd, S, Graham, W, Campbell, O, Mulokozi, A and Manzi, F (2021). Infection Surveillance by Telephone, Early Postpartum (I-STEP). [Data Collection]. Ifakara Health Institute, Ifakara, Tanzania. https://data.ihi.or.tz/index.php/catalog/179/

Band, G, Leffler, EM, Jallow, M, Sisay-Joof, F, Ndila, CM, Macharia, AW, Hubbart, C, Jeffreys, AE, Rowlands, K, Nguyen, T, Goncalves, SM, Ariani, CV, Stalker, J, Pearson, RD, Amato, R, Drury, E, Sirugo, G, D'Alessandro, U, Bojang, KA, Marsh, K, Peshu, N, Conway, DJ, Williams, TN, Rockett, KA and Kwiatkowski, DP (2021). A dataset of human and Plasmodium falciparum genotypes in severe malaria cases from The Gambia and Kenya. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4973476

Olaniran, A (2021). Data for: "Informed Decisions for Actions to Improve Maternal and Newborn Health: The role of context in the implementation of Nigeria Healthcare Quality Initiative in Lagos State, Nigeria". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001954.

Dodds, C, Keogh, P, Bourne, A, McDaid, L, Squire, C, Weatherburn, P and Young, I (2021). Supplemental material for: The Long and Winding Road: Archiving and Re-Using Qualitative Data from 12 Research Projects Spanning 16 Years. [Data Collection]. SAGE Journals. https://doi.org/10.25384/SAGE.12489428.v1

Samuels, THA, Shete, PB, Ojok, C, Nalugwa, T, Farr, K, Turyahabwe, S, Katamba, A, Cattamanchi, A and Moore, DAJ (2021). Where will it end? Pathways to care and catastrophic costs following negative TB evaluation in Uganda. Raw data for analysis. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0253927.s005

Davidson, JA (2021). jenAdavidson/cvrisk_mace_ari. [Data Collection]. Github. https://github.com/jenAdavidson/cvrisk_mace_ari

Ediriweera, DS, Kasthuriratne, A, Pathmeswaran, A, Gunawardene, NK, Jayamanne, SF, Murray, K, Iwamura, T, Isbister, G, Dawson, A, Lalloo, DG, de Silva, HJ and Diggle, PJ (2021). Evaluating spatiotemporal dynamics of snakebite in Sri Lanka: Monthly incidence mapping from a national representative survey sample. S1 Data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009447.s009

Sturt, A (2021). Data for: "Association between Female Genital Schistosomiasis and HIV-1 incidence: a retrospective cohort study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001927.

Dorman, M, Thomson, NR and Campos, J (2021). Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemic Vibrio cholerae infection. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14384225.v1

Assefa, N, Demissie, L, Teklemarriam, Z, Oundo, JO, Madrid, L, Dessie, Y and Scott, JAG (2021). Replication Data for: Seroprevalence of anti–SARS-CoV-2 antibodies in women attending antenatal care in eastern Ethiopia. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/XIWCXN

Gimma, A, Wong, KL, Van Xandvoort, K, Jarvis, CI and Edmunds, WJ (2021). CoMix social contact data (UK). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4905745

Oliphant, NP, Ray, N, Bensaid, K, Ouedraogo, A, Gali, AY, Habi, O, Maazou, I, Panciera, R, Muñiz, M, Sy, Z, Manda, S, Jackson, D and Doherty, T (2021). Supplementary Appendix 1c of "Optimising geographical accessibility to primary health care: a geospatial analysis of community health posts and community health workers in Niger". [Data Collection]. Zenodo.

Tazare, J (2021). johntaz/HDPS-Stata-Demo. [Data Collection]. Github. https://github.com/johntaz/HDPS-Stata-Demo/

Sturt, A, Bustinduy, A and Webb, E (2021). Data for: "Cervicovaginal Immune Activation in Zambian Women with Female Genital Schistosomiasis". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001926.

Gimma, A (2021). amygimma/comix_uk_summary_analysis. [Data Collection]. Github. https://github.com/amygimma/comix_uk_summary_analysis

Chandler, DJ, Galván-Casas, C, Mitjá, O, Esteban, S, Kafulafula, J, Phiri, T, Navarro-Fernández, Í, Román-Curto, C, Mtenje, H, Thauzeni, G, Harawa, E, Kaluzi, S, Diere, M, Mkandawire, M, Malizani, S, Chifundo, A, Utrera-Busquets, M, Roncero-Riesco, M, López Martín-Prieto, S, Vilanova-Urdániz, I, Petiti, GH, de Gálvez Aranda, MV, No Pérez, N, Rueda Gómez-Calcerrada, M, Iranzo, P, Escalonilla García-Patos, P, de Troya-Martín, M, Romero Gomez, J, Cardeñoso-Alvarez, E, Lucas Truyols, S, Aspe Unanue, L, Bajo del Pozo, C, Comunión Artieda, A, Martínez González, MI, López-López, OF, Moreno-Artero, E, Cubiró, X, Meilán-Sánchez, I, Tomás-Velázquez, A, López-Sánchez, C, Sánchez-Martínez, EM, Edwards, HA, Herrera Morueco, M, Zehe Rubiera, J, Salguero Caldera, L, Blanes-Moreno, U, Uribarren-Movilla, M and Marks, M (2021). Patients attended: Scabies, Impetigo and demographic data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009386.s001

Countdown to 2030 Health Financing Data Analysis Centre (2021). Aid for reproductive, maternal, newborn and child health: data generated using the Muskoka2 method, 2002-2019. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002272.

Fennell, TG, Blackwell, GA, Thomson, NR and Dorman, MJ (2021). gbpA and chiA genes are not uniformly distributed amongst diverse Vibrio cholerae. [Data Collection]. Microbiology Society. https://doi.org/10.6084/m9.figshare.14398688.v1

Randera-Rees, S, Safari, WC, Gareta, D, Herbst, K, Baisley, K and Grant, AD (2021). Clinic attendance by sex and HIV status in rural South Africa. [Data Collection]. Africa Health Research Institute (AHRI). https://doi.org/10.23664/AHRI.CLINIC.VISITS.CODE.2021

Shaver, J, Shenk, MK, Sear, R, Sosis, R, Spake, L, Schaffnit, S, Lynch, R and Hassan, A (2021). The Evolutionary Dynamics of Religion, Family Size, and Child Success. [Data Collection]. OSF. https://osf.io/b865v

Kucharski, AJ (2021). adamkucharski/covid-import-model. [Data Collection]. Github. https://github.com/adamkucharski/covid-import-model

Davidson, J, Warren-Gash, C, Gayle, A, Strongman, H, Nissen, F and LSHTM Electronic Health Record team (2021). Clinical codelist - Asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002397.

Dedman, D, Carreira, H and Strongman, H (2021). Clinical codelist - Cancer. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002408.

Bhaskaran, K (2021). Clinical codelist - Cancer. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002409.

Davidson, J, Warren-Gash, C, Banerjee, A, Smeeth, L, Evans, D and Clay, S (2021). Clinical codelist - Cerebrovascular disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002394.

Davidson, J, Warren-Gash, C, Banerjee, A, Smeeth, L, Evans, D and Clay, S (2021). Clinical codelist - Chronic cardiac disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002392.

Davidson, J, Warren-Gash, C, Mcdonald, H, Gayle, A, Evans, D and Clay, S (2021). Clinical codelist - Chronic respiratory disease other than asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002398.

Davidson, J and Warren-Gash, C (2021). Clinical codelist - Dementia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002402.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A, Smeeth, L, Evans, D and Clay, S (2021). Clinical codelist - Diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002407.

Davidson, J (2021). Clinical codelist - Hypertension. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002396.

Strongman, H, Forbes, H and Bhate, K (2021). Clinical codelist - Psoriasis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002400.

Strongman, H, Mansfield, K and LSHTM Electronic Health Records team (2021). Clinical codelist - Rheumatoid Arthritis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002399.

LSHTM Electronic Health Research team (2021). Clinical codelist - Venous thromboembolism. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002395.

Davidson, J, Warren-Gash, C, Mcdonald, H, Evans, D and Clay, S (2021). Clinical codelist - chronic kidney disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002406.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002404.

Davidson, J, Warren-gash, C, Mcdonald, H, Evans, D and Clay, S (2021). Clinical codelist - chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002405.

Davidson, J, Warren-gash, C and LSHTM Electronic Health Records team (2021). Clinical codelist - chronic neurological conditions other than dementia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002403.

Davidson, J, Warren-Gash, C and Cadogan, S (2021). Clinical codelist - learning disabilities. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002401.

Davidson, J, Warren-Gash, C, Mcdonald, H, Evans, D and Clay, S (2021). Clinical codelists - Immunosuppression. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002410.

Forbes, H and Carreira, H (2021). Risk factor codelist - Body Mass Index (BMI). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002413.

Mathur, R (2021). Risk factor codelist - Ethnicity. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002414.

Bhaskaran, K (2021). Risk factor codelist - Smoking. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002412.

Forbes, H (2021). Risk factor codelist - smoking. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002411.

Gimma, A, Wong, KL, Coletti, P and Jarvis, CI (2021). CoMix social contact data (Austria). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4775972

Olaru, ID (2021). ARGUS study - clinical and bacteriological outcomes dataset. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.v41ns1rwb

Paton, RS, Kamau, A, Akech, S, Agweyu, A, Ogero, M, Mwandawiro, C, Mturi, N, Mohammed, S, Mpimbaza, A, Kariuki, S, Otieno, NA, Nyawanda, BO, Mohamed, AF, Mtove, G, Reyburn, H and Gupta, S (2021). Replication Data for: Malaria infection and severe disease risks in Africa. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/XGDB3K

Spake, L, Schaffnit, S, Sear, R, Shenk, MK, Sosis, R and Shaver, J (2021). Mother's partnership status and allomothering networks in the United Kingdom and United States. [Data Collection]. Open Science Framework. https://osf.io/zpu5f/

Anywaine, Z, Lule, SA, Hansen, C, Warimwe, G and Elliott, A (2021). Study investigating the clinical manifestations of Rift Valley fever in humans: Systematic review and meta-analysis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002178.

Motala, A, Adebamowo, C, Balde, N, Kaleebu, P, Kapiga, S, Levitt, N, Mayige, M, McCarthy, M, Nyirenda, M, Heyderman, R, Oli, J, Rotimi, C, Sandhu, M, Sobngwi, E, Smeeth, L and Kenneth, E (2021). The H3A Diabetes Study: A multi-centre study of the prevalence and environmental and genetic determinants of type 2 diabetes in sub-Saharan Africa. (Field Data collection 2015-2018). [Data Collection]. Africa Health Research Institute. https://doi.org/10.23664/H3A.CLINICAL.AND.POPULATION.DATASET.2021.VERSION.1

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). Continent Summary Reproduction Number (R) Based on Reported Cases. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/F9HVNL

Fuehrer, H, Dombrowski, JG, Barateiro, A, Peixoto, EPM, Barros, André Boler Cláudio da Silva, Souza, RMd, Clark, TG, Campino, S, Wrenger, C, Wunderlich, G, Palmisano, G, Epiphanio, S, Gonçalves, LA and Marinho, CRF (2021). Study database for: "Adverse pregnancy outcomes are associated with Plasmodium vivax malaria in a prospective cohort of women from the Brazilian Amazon". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009390.s009

Abbott, S, Bennett, C, Hickson, J, Allen, J, Sherratt, K and Funk, S (2021). National and Subnational Estimates of the Covid 19 Reproduction Number (R) for Belgium Based on Test Results. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NALGQJ

Parker, E (2021). vac-lshtm/VaC_tracker. [Data Collection]. Github. https://github.com/vac-lshtm/VaC_tracker

Balogun, M, Banke-Thomas, A, Sekoni, A, Boateng, GO, Yesufu, V, Wright, O, Ubani, O, Abayomi, A, Afolabi, BB and Ogunsola, F (2021). Dataset of 1241 clients of RMNCH services during the COVID-19 outbreak in Lagos. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0251382.s002

Lovell-Read, FA, Funk, S, Obolski, U, Donnelly, CA and Thompson, RN (2021). Supplementary material from "Interventions targeting non-symptomatic cases can be important to prevent local outbreaks: SARS-CoV-2 as a case study". [Data Collection]. The Royal Society. https://doi.org/10.6084/m9.figshare.c.5416023.v1

Fennell, TG, Blackwell, GA, Thomson, NR and Dorman, MJ (2021). Supporting data for "chiA and gbpA genes are not uniformly distributed amongst diverse Vibrio cholerae". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13169189

Lindsay, S, Carrasco-Tenezaca, M, Jawara, M, Bradley, J, D'Alessandro, U, Jeffries, D, Pinder, M and Knudsen, J (2021). Supplementary data files & video for Carrasco-Tenezaca published in the Journal of the Royal Society Interface, 'The relationship between house height and mosquito house entry: an experimental study in rural Gambia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14483475.v1

London School of Hygiene & Tropical Medicine (2021). Sequencing of M/XDR isoaltes from Pakistan. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB43284

Goncalves, B (2021). Data for: "Estimation of country-level incidence of early-onset invasive Group B Streptococcus disease in infants using Bayesian methods". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002118.

Vestergaard, SV (2021). Denmark-Codelist-ICD10-AKI-Outcome. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002258.

Vestergaard, SV (2021). Denmark-Codelist-ICD10-HeartFailure-Outcome. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002259.

Vestergaard, SV (2021). Denmark-Codelist-ICD10-MyocardialInfarction-Outcome. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002260.

Vestergaard, SV (2021). Denmark-Codelist-ICD10-Stroke-Outcome. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002261.

Bidulka, P (2021). England-Codelist-ICD10-Covariates. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002256.

Bidulka, P (2021). England-Codelist-ICD10-Outcomes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002254.

Bidulka, P (2021). England-Codelist-ProductCodes-Covariates. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002255.

Bidulka, P (2021). England-Codelist-ReadCodes-Covariates. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002257.

Teixeira, MG, Skalinski, LM, Paixao Cruz, ES, Costa, Maria da Conceição N., Barreto, FR, Campos, GS, Sardi, SI, Carvalho, RH, Natividade, M, Itaparica, M, Dias, JP, Trindade, SC, Teixeira, BP, Morato, V, Santana, EB, Goes, CB, Silva, Neuza Santos de Jesus, Santos, Carlos Antonio de Souza Teles, Rodrigues, LC and Whitworth, J (2021). Seroprevalence of Chikungunya virus and living conditions in Feira de Santana, Bahia-Brazil. S1 Database. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009289.s001

Adesanya, E, Cook, S, Mansfield, KE, Crellin, E, Smeeth, L and Herrett, E (2021). Clinical Code list - Read codes for substance abuse. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002185.

Adesanya, E, Cook, S, Mansfield, KE, Crellin, E, Smeeth, L and Herrett, E (2021). Clinical code list - Talking therapies. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002186.

Lewer, D, Padmanathan, P, Arfeen, MNU, Denaxas, S, Forbes, H, Gonzalez-Izquierdo, A and Hickman, M (2021). Healthcare use by people who use illicit opioids (HUPIO): development of a cohort based on electronic primary care records in England (extended data). [Data Collection]. University College London, London, United Kingdom. https://doi.org/10.5522/04/13253906.v5

Adesanya, E, Cook, S, Mansfield, KE, Crellin, E, Smeeth, L and Herrett, E (2021). Product codes - Antidepressants. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002184.

Marshall, O, Blaylock, R, Murphy, C and Sanders, J (2021). Risk messages relating to pregnancy and fertility: a media content analysis (dataset). [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14480784.v1

Mosha, MV, Msuya, SE, Kasagama, E, Ayieko, P, Todd, J and Filteau, S (2021). Childhood obesity. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0249595.s001

Dorman, M, Thomson, NR and Campos, J (2021). Supporting data for "Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemic Vibrio cholerae infection". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13636577.v1

Fragki, S, Dirven, H, Fletcher, T, Grasl-Kraupp, B, Bjerve Gützkow, K, Hoogenboom, R, Kersten, S, Lindeman, B, Louisse, J, Peijnenburg, A, Piersma, AH, Princen, HMG, Uhl, M, Westerhout, J, Zeilmaker, MJ and Luijten, M (2021). Systemic PFOS and PFOA exposure and disturbed lipid homeostasis in humans: what do we know and what not? [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14420432.v2

Boggs, D, Atijosan-Ayodele, O, Yonso, H, Scherer, N, O'Fallon, T, Deniz, G, Volkan, S, Örücü, A, Pivato, I, Beck, AH, Akıncı, İ, Kuper, H, Foster, A, Patterson, A and Polack, S (2021). Additional file 1 of Musculoskeletal impairment among Syrian refugees living in Sultanbeyli, Turkey: prevalence, cause, diagnosis and need for related services and assistive products. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14457117.v1

Mitchell, K, Purcell, C, Forsyth, R, Barry, S, Hunter, R, Simpson, SA, McDaid, L, Elliot, L, McCann, M, Wetherall, K, Broccatelli, C, Bailey, JV and Moore, L (2021). A peer-led intervention to promote sexual health in secondary schools: the STASH feasibility study. [Data Collection]. University of Glasgow, Glasgow, Scotland. https://doi.org/10.5525/gla.researchdata.1110

Kitonsa, J, Kamacooko, O, Bahemuka, UM, Kibengo, F, Kakande, A, Wajja, A, Basajja, V, Lumala, A, Ssemwanga, E, Asaba, R, Mugisha, J, Pierce, BF, Shattock, R, Kaleebu, P and Ruzagira, E (2021). Survey data on willingness to participate in COVID-19 vaccine trials among healthcare workers in three Ugandan hospitals. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002168.

Munday, JD, Jarvis, CI, Gimma, A, Wong, KL, van Zandvoort, K, Funk, S and Edmunds, WJ (2021). CoMix - Age structured contact matrices for 9 key periods of the COVID-19 epidemic in England. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.4677018

Schultze, A, Hulme, W, Davy, S, Mackenna, B, Nightingale, E and Inglesby, P (2021). opensafely/carehomes-short-data-report. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.4675682

Rishard, M, Fahmy, FF, Senanayake, H, Ranaweera, AKP, Armocida, B, Mariani, I and Lazzerini, M (2021). Correlation among experience of person-centered maternity care, provision of care and women’s satisfaction: Cross sectional study in Colombo, Sri Lanka. S1 File. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0249265.s009

Reinsma, K and Baik, D (2021). A Randomized Cluster Controlled Study of an Interactive Voice Response Intervention and PD/Hearth ("PDH") to Improve Knowledge, Behavior Change, and Level of Confidence in Caregivers of Underweight Children in Cambodia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14381888.v3

Wright, K, de Silva, K, Plain, KM, Purdie, AC, Blair, TA, Duggin, IG, Britton, WJ and Oehlers, SH (2021). Source data for graphs. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1009186.s008

Jeffries, CL, Cansado-Utrilla, C, Beavogui, AH, Stica, C, Lama, EK, Kristan, M, Irish, SR and Walker, T (2021). Table S2. from Evidence for natural hybridization and novel Wolbachia strain superinfections in the Anopheles gambiae complex from Guinea. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14316674.v1

Wright, K, de Silva, K, Plain, KM, Purdie, AC, Blair, TA, Duggin, IG, Britton, WJ and Oehlers, SH (2021). miR-206 target prediction results from TargetScan analysis. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1009186.s007

Luque-Fernandez, MA (2021). migariane/Spanish_LifeTablesByDeprivation: Spanish Abridged Life Tables by Deprivation. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4662659

Johnson, C, Kumwenda, M, Meghji, J, Choko, AT, Phiri, M, Hatzold, K, Baggaley, R, Taegtmeyer, M, Terris-Prestholt, F, Desmond, N and Corbett, EL (2021). Additional file 1 of ‘Too old to test?’: A life course approach to HIV-related risk and self-testing among midlife-older adults in Malawi. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14369899.v1

Kelly-Hope, LA, Sanders, AM, Harding-Esch, E, Willems, J, Ahmed, F, Vincer, F and Hill, R (2021). Additional file 2 of Complex emergencies and the control and elimination of neglected tropical diseases in Africa: developing a practical approach for implementing safe and effective mapping and intervention strategies. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14355436.v1

Kelly-Hope, LA, Sanders, AM, Harding-Esch, E, Willems, J, Ahmed, F, Vincer, F and Hill, R (2021). Additional file 3 of Complex emergencies and the control and elimination of neglected tropical diseases in Africa: developing a practical approach for implementing safe and effective mapping and intervention strategies. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14355439.v1

Masselot, P (2021). PierreMasselot/Frontier-FrenchScientificYoutube. [Data Collection]. Github. https://github.com/PierreMasselot/Frontier-FrenchScientificYoutube

Pisani, E, Hasnida, A, Rahmi, M, Harsono, S, Kok, M and Anggriani, Y (2021). Supplementary material for Pisani et al: Substandard and falsified medicines: proposed methods for case finding and sentinel surveillance. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/SELJ0Z

Simms, V and Chinoda, S (2021). Effectiveness of a peer-led adolescent mental health intervention on HIV virological suppression and mental health in Zimbabwe: Baseline and Endline questionnaires. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002142.

Mendelsohn, SC, Fiore-Gartland, A, Penn-Nicholson, A, Mulenga, H, Kimbung, S, Borate, B, Hadley, K, Hikuam, C, Musvosvi, M, Bilek, N, Erasmus, M, Jaxa, L, Raphela, R, Nombida, O, Kaskar, M, Sumner, T, White, RG, Innes, C, Brumskine, W, Hiemstra, A, Malherbe, ST, Hassan-Moosa, R, Tameris, M, Walzl, G, Naidoo, K, Churchyard, G, Scriba, TJ and Hatherill, M (2021). Validation of Correlates of Risk of TB Disease in High Risk Populations (CORTIS-HR) Study: Public, subject-level RISK11 signature scores and metadata. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.14176484.v1

Davidson, J and Warren-Gash, C (2021). Clinical codelist - CPRD Aurum - acute respiratory infection and influenza/influenza-like-illness codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002191.

Davidson, J (2021). Clinical codelist - CPRD Aurum - hypertension. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002194.

Davidson, J (2021). Clinical codelist - CPRD Aurum - major adverse cardiovascular event. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002196.

Davidson, J (2021). Clinical codelist - CPRD GOLD - Hypertension. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002195.

Davidson, J (2021). Clinical codelist - CPRD GOLD - Major Adverse Cardiovascular Event. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002197.

Davidson, J and Warren-Gash, C (2021). Clinical codelist - CPRD GOLD - acute respiratory infection and influenza/influenza-like-illness codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002192.

Davidson, J (2021). Clinical codelist - HES - Major Adverse Cardiovascular Event. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002198.

Davidson, J and Warren-Gash, C (2021). Clinical codelist - HES - acute respiratory infection and influenza/influenza-like-illness codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002193.

Davidson, J (2021). Therapy codelist - CPRD Aurum - Statins. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002199.

Davidson, J (2021). Therapy codelist - CPRD Aurum - antihypertensives. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002187.

Davidson, J (2021). Therapy codelist - CPRD Aurum - antiplatelets. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002189.

Davidson, J (2021). Therapy codelist - CPRD GOLD - Statins. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002200.

Strongman, H (2021). Therapy codelist - CPRD GOLD - antihypertensives. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002188.

Cadogan, S (2021). Therapy codelist - CPRD GOLD - antiplatelets. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002190.

Milligan, P (2021). Effectiveness of seasonal malaria chemoprevention at scale in west and central Africa: an observational study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002136.

Safari, W and Baisley, K (2021). Clinic attendance by sex and HIV status in rural South Africa - Data and Code. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002130.

Lowe, R (2021). Data and R code to accompany 'Combined effects of hydrometeorological hazards and urbanisation on dengue risk in Brazil: a spatiotemporal modelling study'. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4632204

Wang, SV, Sreedhara, SK, Schneeweiss, S and REPEAT Initiative (2021). Reproducible Evidence: Practices to Enhance and Achieve Transparency (REPEAT). [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/MY5GN

London School of Hygiene & Tropical Medicine (2021). Atypical Salmonella: Invasive atypical non-typhoidal Salmonella serovars in The Gambia. [Data Collection]. National Center for Biotechnology Information. https://www.ncbi.nlm.nih.gov/bioproject/715881

Davidson, J and Warren-Gash, C (2021). Clinical codelist - CPRD Aurum - chronic neurological disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002216.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Aurum - spleen dysfunction. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002238.

Ayieko, P, Hashim, R, Grosskurth, H and Kapiga, S (2021). Hand hygiene intervention to optimise soil transmitted helminths infection control among primary school children: endline survey data from a cluster randomised trial. [Data Collection]. Mendeley Data. https://doi.org/10.17632/9wgnn35jcr.1

Mbivnjo, EL, Lynch, M and Huws, JC (2021). Supplementary material for the article, "Measles Outbreak Investigation Process in Low- and Middle-Income Countries: A Systematic Review of the Methods and Costs of Contact Tracing". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14247431.v3

Laban, N (2021). Comparable exposure to SARS-CoV-2 in young children and healthcare workers in Zambia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.14237285.v2

Olaru, ID (2021). Knowledge, attitudes and practices relating to antibiotic use and resistance among prescribers from public primary healthcare facilities in Harare, Zimbabwe. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.66t1g1k1s

Colón-González, FJ, Sewe, MO, Tompkins, AM, Sjödin, H, Casallas, A, Rocklöv, J, Caminade, C and Lowe, R (2021). Projecting the risk of mosquito-borne diseases in a warmer and more urbanised world: a multi-model multi-scenario intercomparison study. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/HPAEY

Baptiste, P and Tomlinson, LA (2021). Code lists for: "Real-world effects of ACE inhibitors and Angiotensin Receptor Blockers: protocol for an emulation study of the ONTARGET trial using electronic health records". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002112.

O’Hara, G, Mokaya, J, Hau, J, Downs, L, Karabarinde, A, Asiki, G, McNaughton, A, Seeley, J, Matthews, P and Newton, R (2021). Liver function tests and fibrosis scores in a rural population in Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.8292194.v3

Olaru, I (2021). ARGUS clinical and bacteriological outcomes dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002110.

Doughty, H, Milner-Gulland, EJ, Lee, JSH, Oliver, K, Carrasco, LR and Veríssimo, D (2021). Raw data for: "Evaluating a large-scale online behaviour change intervention aimed at wildlife product consumers in Singapore". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0248144.s003

Jung, S, Endo, A, Kinoshita, R and Nishiura, H (2021). SungmokJung/Projection_Japan_COVID19 v1.0.0. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4576936

Simpson, H, Tabah, EN, Phillips, RO, Frimpong, M, Maman, I, Ampadu, E, Timothy, J, Saunderson, P, Pullan, RL and Cano, J (2021). Total area predicted suitable and population living in suitable areas for Buruli ulcer, M. ulcerans, and both, by country in African continent. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0009157.s019

Gliddon, HD, Kaforou, M, Alikian, M, Habgood-Coote, D, Zhou, C, Oni, T, Anderson, ST, Brent, AJ, Crampin, AC, Eley, B, Heyderman, R, Kern, F, Langford, PR, Ottenhoff, THM, Hibberd, ML, French, N, Wright, VJ, Dockrell, HM, Coin, LJ, Wilkinson, RJ and Levin, M (2021). Identification of Reduced Host Transcriptomic Signatures for Tuberculosis Disease and Digital PCR-Based Validation and Quantification. [Data Collection]. Frontiers in Immunology. https://doi.org/10.3389/fimmu.2021.637164.s001

Simons, D, Shahab, L, Brown, J and Perski, O (2021). The association of smoking status with SARS-CoV-2 infection, hospitalisation and mortality from COVID-19: A living rapid evidence review and Bayesian meta-analyses (version 11) - Data. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4002046

Tanton, C, McDonagh, L, Cabecinha, M, Clifton, S, Geary, R, Rait, G, Saunders, J, Cassell, J, Bonell, C, Mitchell, KR and Mercer, CH (2021). Data for: "How does the sexual, physical and mental health of young adults not in education, employment or training (NEET) compare to workers and students?". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002155.

Davies, NG, Abbott, S, Barnard, RC, Jarvis, CI, Kucharski, AJ, Munday, J, Pearson, CAB, Russell, TW, Tully, DC, Washburne, AD, Wenseleers, T, Gimma, A, Waites, W, Wong, KL, van Zandvoort, K, Silverman, JD, Diaz-Ordaz, K, Keogh, R, Eggo, RM, Funk, S, Jit, M, Atkins, KE and Edmunds, WJ (2021). Analysis data and code for "Estimated transmissibility and impact of SARS-CoV-2 Variant of Concern 202012/01 in England". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4549674

Tadesse, FG, Ashine, T, Teka, H, Esayas, E, Messenger, LA, Chali, W, Meerstein-Kessel, L, Walker, T, Wolde Behaksra, S, Lanke, K, Heutink, R, Jeffries, CL, Mekonnen, DA, Hailemeskel, E, Tebeje, SK, Tafesse, T, Gashaw, A, Tsegaye, T, Emiru, T, Kigozi, S, Bogale, EA, Yohannes, G, Kedir, S, Shumie, G, Sabir, SA, Mumba, P, Dengela, D, Kolaczinski, JH, Wilson, A, Churcher, TS, Chibsa, S, Murphy, M, Balkew, M, Irish, S, Drakeley, C, Gadisa, E and Bousema, T (2021). Anopheles stephensi mosquitoes as vectors of Plasmodium vivax and falciparum, Horn of Africa, 2019. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.gf1vhhmnt

Bancroft, D, Power, G, Jones, R, Massad, E, Bernstein Iriat, J, Preet, R, Kinsman, J and Logan, J (2021). ZikaPLAN – Research tools used for focus group discussion and interviews. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002097.

Belesova, K, Callaghan, M, Minx, J, Creutzig, F, Turcu, C, Hutchinson, E, Milner, J, Crane, M, Haines, A, Davies, M and Wilkinson, P (2021). Search strategies for: "Climate action for health and wellbeing in cities: a protocol for the systematic development of a database of peer-reviewed studies using machine learning methods". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002094.

Sweeney, S, Cunnama, L, Laurence, Y, Garcia Baena, I, Kairu, A, Minyewelet, M, Eyob, H, Chatterjee, S, Toshniwal, M, Chikovani, I, Shingelia, N, Capeding,, TJ and Vassall, A (2021). Value TB Dataset: costs per intervention. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/QOI6IR

Bhopal, SS, Roy, R, Verma, D, Kumar, D, Khan, B, Soremekun, S, Oates, J, Divan, G and Kirkwood, BR (2021). Dataset for: Using the Mothers Object Relations Scale for early childhood development research in rural India. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002095.

Bousema, T (2021). Data from: Higher gametocyte production and mosquito infectivity in chronic compared to incident Plasmodium falciparum infections. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.pc866t1n3

Adetifa, IMO, Uyoga, S, Gitonga, JN, Mugo, D, Otiende, M, Nyagwange, J, Karanja, HK, Tuju, J, Wanjiku, P, Aman, R, Mwangangi, M, Amoth, P, Kasera, K, Ng’ang’a, W, Rombo, C, Yegon, C, Kithi, K, Odhiambo, E, Rotich, T, Orgut, I, Kihara, S, Bottomley, C, Kagucia, EW, Gallagher, KE, Etyang, A, Voller, S, Lambe, T, Wright, D, Barasa, E, Tsofa, B, Bejon, P, Ochola-Oyier, LI, Agweyu, A, Scott, JAG and Warimwe, GM (2021). Replication Data for: Temporal trends of SARS-CoV-2 seroprevalence in transfusion blood donors during the first wave of the COVID-19 epidemic in Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/FQUNVD

Chapman, LAC, Shukla, P and Lo, NC (2021). Comparison of COVID-19 vaccine prioritization strategies in the United States. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4516525

Roberts, C, Rogers, N, Waterlow, N, Brindle, H, Enria, L and Lees, S (2021). Behavioural change towards reduced intensity physical activity is disproportionately prevalent among adults with serious health issues or self-perception of high risk during the UK COVID-19 lockdown. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002091.

Ouansafi, I (2021). Friendship Bench problem-solving therapy and its impact on adherence to ART among young people – Interview transcripts. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002002.

Simms, V (2021). Friendship Bench trial: lay worker training in problem-solving therapy to reduce symptoms of common mental disorders. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001515.

Cortes, T (2021). E-MTAB-8835 - Ribosome profiling of Mycobacterium tuberculosis under nutrient starvation. [Data Collection]. ArrayExpress. https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-8835/

Abbott, S and Fyles, M (2021). martyn1fyles/HouseholdContactTracing. [Data Collection]. Github. https://github.com/martyn1fyles/HouseholdContactTracing

Mtenga, B, Beard, J, Todd, J and Urassa, M (2021). Kisesa Tanzania - HIV missing data analysis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002083.

Bhaskaran, K (2021). Clinical codelist - Smoking status read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002081.

Stubbs, SC (2021). Molecular characterisation of Crimean-Congo haemorrhagic fever virus detected in African blue ticks feeding on cattle in a Ugandan abattoir. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4282998

Timaeus, I (2021). BugBunny/Pathways_to_Low_Fertility. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3627832

Alobo, M, Mgone, C, Wesonga, CA, Lawn, JE, Ezeaka, C, Okong, P, Temmerman, M, Molineux, E, Malata, A, Wazny, K and Kariuki, T (2021). Research priorities in maternal and neonatal health in Africa: results using the Child Health and Nutrition Research Initiative method involving over 900 experts across the continent. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/38GTU

Dahiru Balami, A, Said, SM, Zulkefli, NAM, Norsa’adah, B and Audu, B (2021). Additional file 1 of Improving malaria preventive practices and pregnancy outcomes through a health education intervention: A randomized controlled trial. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13627127.v1

Snetselaar, J, Rowland, M, Manunda, B, Kisengwa, E, Small, G, Malone, D, Mosha, F and Kirby, M (2021). Experimental data of two IRS hut trials with broflanilide 50WP conducted in Moshi, Tanzania. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001948.

Oliphant, NP, Ray, N, Bensaid, K, Ouedraogo, A, Gali, AY, Habi, O, Maazou, I, Panciera, R, Muñiz, M, Manda, SO, Sy, Z, Jackson, D and Doherty, T (2021). Supplementary Appendix 1c of "Toward a geography of community health workers in Niger: a geospatial analysis". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13536779.v5

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Aurum - Immuosuppressive conditions. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002234.

Davidson, J, Warren-Gash, C, Mcdonald, H, Smeeth, L and Banerjee, A (2021). Clinical codelist - CPRD Aurum - Pneumococcal vaccine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002233.

Davidson, J and Warren-Gash, C (2021). Clinical codelist - CPRD Aurum - asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002208.

Davidson, J, Warren-Gash, C, Banerjee, A and Smeeth, L (2021). Clinical codelist - CPRD Aurum - cardiovascular disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002220.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Aurum - chronic kidney disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002218.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Aurum - chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002212.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Aurum - chronic respiratory disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002214.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A and Smeeth, L (2021). Clinical codelist - CPRD Aurum - diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002222.

Davidson, J and Warren-Gash, C (2021). Clinical codelist - CPRD GOLD - Asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002209.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A and Smeeth, L (2021). Clinical codelist - CPRD GOLD - Diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002223.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD GOLD - Immuosuppressive conditions. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002232.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD GOLD - Influenza vaccine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002227.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD GOLD - Pneumococcal vaccine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002235.

Davidson, J, Warren-Gash, C, Banerjee, A and Smeeth, L (2021). Clinical codelist - CPRD GOLD - cardiovascular disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002221.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD GOLD - chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002213.

Davidson, J and Warren-Gash, C (2021). Clinical codelist - CPRD GOLD - chronic neurological disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002217.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD GOLD - chronic respiratory disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002215.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD GOLD - spleen dysfunction. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002239.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A, Smeeth, L, Strongman, H and Cadogan, S (2021). Codelists for: "Ethnic differences in the incidence of clinically diagnosed influenza: an England population-based cohort study 2008-2018". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002102.

Bower, H, el Karsany, M, Adam, Abd Alhadi Adam Hussein, Idriss, MI, Alzain, MA, Alfakiyousif, MEA, Mohamed, R, Mahmoud, I, Albadri, O, Mahmoud, SAA, Abdalla, OI, Eldigail, M, Elagib, N, Arnold, U, Gutierrez8, B, Pybus, OG, Carter, DP, Pullan, ST, Jacob, ST, Abdallah, TM, Gannon, B and Fletcher, TE (2021). Data for: "Kankasha in Kassala: a prospective observational cohort study of the clinical characteristics, epidemiology, genetic origin, and chronic impact of the 2018 epidemic of Chikungunya virus infection in Kassala, Sudan". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002018.

Eyre, MT, Burns, R, Kirkby, V, Smith, C, Denaxas, S, Nguyen, V, Hayward, A, Shallcross, L, Fragaszy, E and Aldridge, RW (2021). Impact of baseline cases of cough and fever on UK COVID-19 diagnostic testing rates: estimates from the Bug Watch community cohort study - Supplementary material, code and data. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/5J6DY

Bousema, T, Meibalan, E, Barry, A, Gibbins, M, Awandu, S, Meerstein-Kessel, L, Achar, F, Bopp, S, Moxon, C, Diarra, A, Debe, S, Ouedraogo, N, Barry-Some, I, Badoum, E, Fagnima, T, Lanke, K, Goncalves, B, Bradley, J, Wirth, D, Drakeley, C, Guelbeogo, W, Tiono, A, Marti, M, Gibbins, MP, Achcar, F, Ouédraogo, N, Badoum, ES, Fagnima, T, Gonçalves, BP, Guelbeogo, WM and Tiono, AB (2021). Plasmodium falciparum gametocyte density and infectivity in peripheral blood and skin tissue of naturally infected parasite carriers in Burkina Faso. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.g1jwstqmk

Davidson, J and Warren-Gash, C (2021). Therapy codelist - CPRD Aurum - Asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002210.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Therapy codelist - CPRD Aurum - Diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002224.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Therapy codelist - CPRD Aurum - Immunosuppressants. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002230.

Davidson, J, Warren-Gash, C, Mcdonald, H, Smeeth, L and Banerjee, A (2021). Therapy codelist - CPRD Aurum - Influenza vaccine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002228.

Davidson, J and Warren-Gash, C (2021). Therapy codelist - CPRD GOLD - Asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002211.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A and Smeeth, L (2021). Therapy codelist - CPRD GOLD - Diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002225.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Therapy codelist - CPRD GOLD - Immunosuppressants. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002231.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Therapy codelist - CPRD GOLD - Pneumococcal vaccine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002237.

Okere, N, Meta, J, Maokola, W, Martelli, G, van Praag, E, Naniche, D, Gomez, G, Pozniak, A, Rinke de Wit, T, de Klerk, J and Hermans, S (2021). Quality of care in a differentiated HIV service delivery intervention in Tanzania: A mixed methods study. [Data Collection]. Dryad. http://doi.org/10.5061/dryad.bcc2fqzbj

Enria, L, Waterlow, N, Rogers, N, Brindle, H, Lal, S, Eggo, RM, Lees, S and Roberts, C (2021). Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK - Quantitative Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002015.

Bascaran, C, Mwangi, N, D’Esposito, F, Cleland, C, Gordon, I, Ulloa, JAL, Maswadi, R, Mdala, S, Ramke, J, Evans, JR and Burton, MJ (2021). Additional file 3 of Effectiveness of interventions to increase uptake and completion of treatment for diabetic retinopathy in low- and middle-income countries: a rapid review protocol. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13578790.v1

Schmidt, W (2021). Data for: "High initial IgG antibody levels against Orientia tsutsugamushi are associated with an increased risk of severe scrub typhus infection". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001998.

Scriba, TJ, Fiore-Gartland, A, Penn-Nicholson, A, Mulenga, H, Kimbung Mbandi, S, Borate, B, Mendelsohn, SC, Hadley, K, Hikuam, C, Kaskar, M, Musvosvi, M, Bilek, N, Self, S, Sumner, T, White, RG, Erasmus, M, Jaxa, L, Raphela, R, Innes, C, Brumskine, W, Hiemstra, A, Malherbe, ST, Hassan-Moosa, R, Tameris, M, Walzl, G, Naidoo, K, Churchyard, G and Hatherill, M (2021). RISK11 signature scores for the biomarker-guided tuberculosis preventive therapy (CORTIS) randomised controlled trial. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.13573337.v1

Scriba, TJ, Fiore-Gartland, A, Penn-Nicholson, A, Mulenga, H, Kimbung Mbandi, S, Borate, B, Mendelsohn, SC, Hadley, K, Hikuam, C, Kaskar, M, Musvosvi, M, Bilek, N, Self, S, Sumner, T, White, RG, Erasmus, M, Jaxa, L, Raphela, R, Innes, C, Brumskine, W, Hiemstra, A, Malherbe, ST, Hassan-Moosa, R, Tameris, M, Walzl, G, Naidoo, K, Churchyard, G and Hatherill, M (2021). RISK11 signature scores for the biomarker-guided tuberculosis preventive therapy (CORTIS) randomised controlled trial. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.13573337.v1

Palmer, J, Sherratt, K, Martin-Nielsen, R, Bevan, J, Gibbs, H, CMMID COVID-19 Working Group, Funk, S and Abbott, S (2021). covidregionaldata: Subnational data for COVID-19 epidemiology. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.3957539

NatCen Social Research, London School of Hygiene & Tropical Medicine, Russell, M and Senior, M (2021). National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Biological Data: Secure Access. [Data Collection]. UK Data Service. http://doi.org/10.5255/UKDA-SN-8179-1

Russell, M, NatCen Social Research, London School of Hygiene & Tropical Medicine and Senior, M (2021). National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Secure Access. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. http://doi.org/10.5255/UKDA-SN-8178-1

Robinson, N, Brown, H, Antoun, E, Godfrey, KM, Hanson, MA, Lillycrop, KA, Crozier, SR, Murray, R, Pearce, MS, Relton, CL, Albani, V and McKay, JA (2021). Additional file 3 of Childhood DNA methylation as a marker of early life rapid weight gain and subsequent overweight. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.13565700.v1

Sweeney, S, Cunnama, L, Laurence, Y, Garcia Baena, I, Kairu, A, Minyewelet, M, Eyob, H, Chatterjee, S, Toshniwal, M, Chikovani, I, Shingelia, N, Capeding, TJ and Vassall, A (2021). Value TB Dataset: costs per direct & ancillary service. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/UGYNGT

Oliphant, NP, Ray, N, Bensaid, K, Ouedraogo, A, Gali, AY, Habi, O, Maazou, I, Panciera, R, Muñiz, M, Sy, Z, Manda, S, Jackson, D and Doherty, T (2021). Supplementary Appendix 1b of "Optimising geographical accessibility to primary health care: a geospatial analysis of community health posts and community health workers in Niger". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4428176

Oliphant, NP, Ray, N, Bensaid, K, Ouedraogo, A, Gali, AY, Habi, O, Maazou, I, Panciera, R, Muñiz, M, Manda, SO, Sy, Z, Jackson, D and Doherty, T (2021). Supplementary Appendix 1b of "Optimizing geographical accessibility to primary health care at community level in Niger: a geospatial analysis". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4428176

Muchene, L and Safari, W (2021). Two-stage topic modelling of scientific publications: A case study of University of Nairobi, Kenya. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0243208.s006

MacPherson, P (2021). petermacp/tbcascade. [Data Collection]. Github. https://github.com/petermacp/tbcascade

Ababora, JK (2021). Rapid Assessment of Avoidable Blindness Dataset: Ethiopia, Oromia, Jimma (2021). [Data Collection]. London School of Hygiene & Tropical Medicine RAAB Repository. https://doi.org/10.17037/RAABDATASET.00000382.

Mishra, S (2021). Rapid Assessment of Avoidable Blindness Dataset: Nepal, Sudurpashchim Province (2021). [Data Collection]. London School of Hygiene & Tropical Medicine RAAB Repository. https://doi.org/10.17037/RAABDATASET.00000385.

Alonso, S, Vidal, M, Ruiz-Olalla, G, González, R, Manaca, MN, Jairoce, C, Vázquez-Santiago, M, Balcells, R, Vala, A, Rupérez, M, Cisteró, P, Fuente-Soro, L, Cova, M, Angov, E, Nhacolo, A, Sevene, E, Aponte, JJ, Macete, E, Aguilar, R, Mayor, A, Menéndez, C, Dobaño, C and Moncunill, G (2021). Data_Sheet_1_Reduced Placental Transfer of Antibodies Against a Wide Range of Microbial and Vaccine Antigens in HIV-Infected Women in Mozambique. [Data Collection]. Frontiers. https://doi.org/10.3389/fimmu.2021.614246.s001