Data capture method
Number of items: 528.
12 December 2005
  • INTCENS: Stata module to perform interval-censored survival analysis. (2005) Griffin, James
    • 2007
  • Clinical and Health Outcomes Knowledge Base. (2007) Lakhani, A; Olearnik, H; Eayres, D
    • 2009
  • DNAPlotter: circular and linear interactive genome visualization. (2009) Carver, Tim; Thomson, Nick; Bleasby, Alan; Berriman, Matthew; Parkhill, Julian
  • SnoopCGH. (2009) Almagro-Garcia, Jacob; Clark, Taane
    • 7 May 2009
  • A HaemAtlas: characterizing gene expression in differentiated human blood cells. (2009) Watkins, Nicholas A; Gusnanto, Arief; de Bono, Bernard; De, Subhajyoti; Miranda-Saavedra, Diego; Hardie, Debbie L; Angenent, Will G. J.; Attwood, Antony P; Ellis, Peter D; Erber, Wendy; Foad, Nicola S; Garner, Stephen F; Isacke, Clare M; Jolley, Jennifer; Koch, Kerstin; Macaulay, Iain C; Morley, Sarah L; Rendon, Augusto; Rice, Kate M; Taylor, Niall; Thijssen-Timmer, Daphne C; Tijssen, Marloes R; van der Schoot, C. Ellen; Wernisch, Lorenz; Winzer, Thilo; Dudbridge, Frank; Buckley, Christopher D; Langford, Cordelia F; Teichmann, Sarah; Göttgens, Berthold; Ouwehand, Willem H
    • 17 July 2009
  • A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi. (2009) Perkins, Timothy T.; Kingsley, Robert A.; Fookes, Maria C.; Gardner, Paul P.; James, Keith D.; Yu, Lu; Assefa, Samuel A.; He, Miao; Croucher, Nicholas J.; Pickard, Derek J.; Maskell, Duncan J.; Parkhill, Julian; Choudhary, Jyoti; Thomson, Nicholas R.; Dougan, Gordon
    • 7 April 2010
  • Ethnicity and Economic Activity: Longitudinal Perspectives, 1971-2006. (2010) Grundy, Emily
  • Limiting Long-Term Illness: Longitudinal Perspectives, 1971-2006. (2010) Grundy, Emily
    • 20 February 2011
  • DATACHECK: Stata module to perform data checks and produce informative output. (2011) Bhaskaran, Krishnan
    • 2012
  • Droplet Digital PCR (ddPCR) data analysis scripts. (2012) Roberts, Chrissy folder_zip
  • Eyescores - Electronic Data Capture and photographic evidence collection platform for biological field studies. (2012) Roberts, Chrissy; Mtuy, Tara; Derrick, Tamsyn; Burton, Matthew; Holland, Martin
  • In Silico Spoligotyping. (2012) Coll, Francesc; Mallard, K; Preston, MD; Bentley, S; Parkhill, Julian; Mcnerney, Ruth; Martin, N; Clark, Taane
  • VCF Viewer (VARB). (2012) Preston, Mark D.; Manske, M; Horner, N; Assefa, S; Campino, S; Auburn, S; Zongo, I; Ouedraogo, JB; Nosten, F; Anderson, T; Clark, Taane
    • 22 August 2013
  • Effectiveness of electronic reminders to improve medication adherence in tuberculosis patients: a cluster-randomised trial. (2013) Fielding, Katherine; Lewis, James; Jiang, Shiwen
    • 2014
  • IDEAS project - Private sector health data sharing study in Uttar Pradesh. (2014) Gautham, Meenakshi; Subharwal, Manish; Gupta, Sanjay; Spicer, Neil; Mishra, Nirmala description
    • 20 January 2014
  • Vascular Function Intervention Trial in sickle cell disease (V-FIT): Trial Protocol. (2014) Cox, Sharon; Halcox, Julian; Prentice, Andrew; Kamala, Beatrice Abella
    • May 2014
  • PolyTB: A web-based resource designed to explore Mycobacterium tuberculosis complex (MTBC) genomic variation at a global scale. (2014) Coll, Francesc; Preston, Mark; Guerra-Assunção, José Afonso; Hill-Cawthorn, Grant; Harris, David; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Drobniewski, Francis; Gagneux, Sebastien; Glynn, Judith R.; Pain, Arnab; Parkhill, Julian; McNerney, Ruth; Martin, Nigel; Clark, Taane
    • 25 September 2014
  • Data from: Clarifying life lost due to cold and heat: a new approach using annual time series. (2014) Rehill, Nirandeep; Armstrong, Ben; Wilkinson, Paul grid_on
    • 2015
  • IDEAS project - Private sector health data sharing study in West Bengal. (2015) Gautham, Meenakshi; Manish, Subharwal; Sanjay, Gupta; Spicer, Neil
  • IDEAS project - Qualitative data for the Data Informed Platform for Health formative study in West Bengal. (2015) Bhattacharyya, Sanghita
  • TB Profiler. (2015) Coll, Francesc; Mcnerney, Ruth; Preston, Mark D.; Guerra-assunção, José Afonso; Warry, Andrew; Hill-Cawthorne, Grant; Mallard, Kim; Nair, Mridul; Miranda, Anabela; Alves, Adriana; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Hasan, Zahra; Hasan, Rumina; Glynn, Judith; Martin, Nigel; Pain, Arnab; Clark, Taane folder_zip
    • 18 March 2015
  • Data from: Novel R pipeline for analyzing Biolog phenotypic microarray data. (2015) Vehkala, Minna; Shubin, Mikhail; Connor, Thomas R; Thomson, Nick; Corander, Jukka folder_zip
  • Genome-wide analysis of selection on the malaria parasite Plasmodium falciparum in West African populations of differing infection endemicity: Supplementary data. (2015) Mobegi, Victor; Duffy, Craig; Amambua-Ngwa, Alfred; Loua, Kovana M; Laman, Eugene; Nwakanma, Davis C; MacInnis, Bronwyn; Aspeling-jones, Harvey; Murray, Lee; Clark, Taane; Kwiatkowski, Dominic P; Conway, David grid_on
    • 26 March 2015
  • PhyloTrack. (2015) Benavente, Ernest; Coll, Francesc; Furnham, Nick; Mcnerney, Ruth; Glynn, Judith; Campino, Susana; Pain, Arnab; Mohareb, Fady R; Clark, Taane
    • 31 March 2015
  • Data from: Ecological host fitting of Trypanosoma cruzi TcI in Bolivia: mosaic population structure, hybridization and a role for humans in Andean parasite dispersal. (2015) Messenger, Louisa; Garcia, Lineth; Vanhove, Mathieu; Huaranca, Carlos; Bustamante, Marinely; Torrico, Marycruz; Torrico, Faustino; Miles, Michael; Llewellyn, Martin
    • 5 May 2015
  • mvmeta: Multivariate and Univariate Meta-Analysis and Meta-Regression. (2015) Gasparrini, Antonio
    • June 2015
  • Evaluation of WaterAid sanitation in Odisha, India (Household Baseline) (June 2015). (2015) Clasen, Thomas
    • 1 June 2015
  • EPrints Geographic Location plugin. (2015) Jennings, Simon; McNicholl, Rory folder_zip
    • 23 June 2015
  • Data from: Transmission of multidrug-resistant and drug-susceptible tuberculosis within households: a prospective cohort study. (2015) Grandjean, Louis; Gilman, Robert H.; Martin, Laura; Soto, Esther; Castro, Beatriz; Lopez, Sonia; Coronel, Jorge; Castillo, Edith; Alarcon, Valentina; Lopez, Virginia; San Miguel, Angela; Quispe, Neyda; Asencios, Luis; Dye, Christopher; Moore, David
    • 28 July 2015
  • Effect of paying for performance on utilisation, quality, and user costs of health services in Tanzania: a controlled before and after study. (2015) Binyaruka, Peter; Patouillard, Edith; Powell-jackson, Timothy; Greco, Giulia; Maestad, Ottar; Borghi, Josephine description
    • 29 July 2015
  • Replication and re-analysis of a Kenyan stepped-wedge trial – Analysis files. (2015) Davey, Calum; Aiken, Alexander; Hayes, Richard; Hargreaves, James
    • 3 August 2015
  • LSHTM APCs 2015 (Jan-June). (2015) Lawson, Stuart; Murtagh, John description
    • 24 September 2015
  • National Survey of Sexual Attitudes and Lifestyles, 2010-2012. (2015) Johnson, Anne
    • 22 October 2015
  • Additional file 2: of Quantification of the natural history of visceral leishmaniasis and consequences for control. (2015) Chapman, Lloyd A C; Dyson, Louise; Courtenay, Orin; Chowdhury, Rajib; Bern, Caryn; Medley, Graham; Hollingsworth, T. Deirdre description
    • 2016
  • RAAB - Rapid Assessment of Avoidable Blindness. (2016) Limburg, Hans; Meester, Walter; Kuper, Hannah; Polack, Sarah
    • 9 March 2016
  • Validation of the Recording of Acute Exacerbations of COPD in UK Primary Care Electronic Healthcare Records. (2016) Chotirmall, Sanjay Haresh; Rothnie, Kieran; Müllerová, Hana; Hurst, John R.; Smeeth, Liam; Davis, Kourtney; Thomas, Sara L; Quint, Jennifer description
    • 21 April 2016
  • Children with Moderate Acute Malnutrition with No Access to Supplementary Feeding Programmes Experience High Rates of Deterioration and No Improvement: Results from a Prospective Cohort Study in Rural Ethiopia. (2016) James, Philip; Sadler, Kate; Wondafrash, Mekitie; Argaw, Alemayehu; Luo, Hanqi; Geleta, Benti; Kedir, Kiya; Getnet, Yilak; Belachew, Tefera; Bahwere, Paluku
    • 6 May 2016
  • Autopsy Prevalence of Tuberculosis and Other Potentially Treatable Infections among Adults with Advanced HIV Enrolled in Out-Patient Care in South Africa: Lesedi Kamoso study data. (2016) Karat, Aaron S.; Omar, Tanvier; von Gottberg, Anne; Tlali, Mpho; Chihota, Violet N.; Churchyard, Gavin J.; Fielding, Katherine L.; Johnson, Suzanne; Martinson, Neil A.; McCarthy, Kerrigan; Wolter, Nicole; Wong, Emily B.; Charalambous, Salome; Grant, Alison D. description
    • 16 June 2016
  • The Effect of Cash, Vouchers, and Food Transfers on Intimate Partner Violence: Evidence from a Randomized Experiment in Northern Ecuador. (2016) Hidrobo, Melissa; Peterman, Amber; Heise, Lori
    • 15 September 2016
  • Treatment Contact Coverage for Probable Depressive and Probable Alcohol Use Disorders in Four Low- and Middle-Income Country Districts: The PRIME Cross-Sectional Community Surveys. Stata do file for baseline analysis. (2016) Rathod, Sujit D.; De Silva, Mary J.; Ssebunnya, Joshua; Breuer, Erica; Murhar, Vaibhav; Luitel, Nagendra P.; Medhin, Girmay; Kigozi, Fred; Shidhaye, Rahul; Fekadu, Abebaw; Jordans, Mark; Patel, Vikram; Tomlinson, Mark; Lund, Crick description
    • 20 October 2016
  • MESH subjects file for Eprints. (2016) Reid, Andy description
    • 3 November 2016
  • jomo: Multilevel Joint Modelling Multiple Imputation. (2016) Quartagno, Matteo; Carpenter, James
    • 22 December 2016
  • PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. (2016) Chen, Feng; Wang, Shuang; Jiang, Xiaoqian; Ding, Sijie; Lu, Yao; Kim, Jihoon; Sahinalp, S. Cenk; Shimizu, Chisato; Burns, Jane C.; Wright, Victoria J.; Png, Eileen; Hibberd, Martin L.; Lloyd, David D.; Yang, Hai; Telenti, Amalio; Bloss, Cinnamon S.; Fox, Dov; Lauter, Kristin; Ohno-Machado, Lucila
    • January 2017
  • R code and data for: "A penalized framework for distributed lag non-linear models". (2017) Gasparrini, Antonio; Scheipl, Fabian; Armstrong, Ben; Kenward, Mike
    • 15 January 2017
  • R and STATA code for: "Conditional Poisson models: a flexible alternative to conditional logistic case cross-over analysis". (2017) Armstrong, Ben G.; Gasparrini, Antonio; Tobias, Aurelio
  • R code and data for: "Associations of Inter- and Intraday Temperature Change With Mortality". (2017) Vicedo-cabrera, Ana M.; Forsberg, Bertil; Tobias, Aurelio; Zanobetti, Antonella; Schwartz, Joel; Armstrong, Ben; Gasparrini, Antonio
  • R code for: "Distributed lag non-linear models". (2017) Gasparrini, Antonio; Armstrong, Ben; Kenward, Mike G.
  • R code for: "Modeling exposure–lag–response associations with distributed lag non-linear models". (2017) Gasparrini, Antonio
  • R code for: "The impact of heat waves on mortality". (2017) Gasparrini, Antonio; Armstrong, Ben
  • R code, Stata code and data for: "Time series regression studies in environmental epidemiology". (2017) Bhaskaran, Krishnan; Gasparrini, Antonio; Hajat, Shakoor; Smeeth, Liam; Armstrong, Ben
  • Tutorial code for "Distributed Lag Linear and Non-Linear Models in R: The Package dlnm". (2017) Gasparrini, Antonio
    • 16 January 2017
  • dlnm: Distributed Lag Non-Linear Models. (2017) Gasparrini, Antonio; Armstrong, Ben; Scheipl, Fabian
    • 25 January 2017
  • gasparrini/2014_gasparrini_BMCmrm_Rcodedata. (2017) Gasparrini, Antonio; Leone, Michela
    • 6 February 2017
  • rbi: R Interface to LibBi. (2017) Jacob, Pierre E.; Lee, Anthony; Murray, Lawrence; Funk, Sebastian
    • 14 February 2017
  • The development and validation of a Real Time Location System to reliably monitor everyday activities in natural contexts. (2017) Judah, Gaby; de Witt Huberts, Jessica; Drassal, Allan; Aunger, Robert grid_on
    • 14 March 2017
  • CVAUROC: Stata module to compute Cross-validated Area Under the Curve for ROC Analysis after Predictive Modelling for Binary Outcomes. (2017) Luque, Miguel Angel; Maringe, Camille; Nelson, Paul
    • 3 June 2017
  • smcfcs: Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification. (2017) Bartlett, Jonathan; Keogh, Ruth
    • 20 June 2017
  • Point-of-contact Interactive Record Linkage (PIRL). (2017) Kabudula, Chodziwadziwa; Rentsch, Christopher
    • 22 September 2017
  • Open Data Kit PDF Report Creator. (2017) Roberts, Chrissy
    • 5 October 2017
  • FPC Grader. (2017) Roberts, Chrissy
    • 8 October 2017
  • CMATCH: Stata module to tabulate matched pairs in 1:1 case control study by exposure status. (2017) Fernandez, Miguel Angel Luque
    • 14 November 2017
  • Model code for "An explanation for the low proportion of tuberculosis that results from transmission between household and known social contacts". (2017) Mccreesh, Nicky description
    • 5 December 2017
  • R code and data for: "Multivariate meta-analysis for non-linear and other multi-parameter associations". (2017) Gasparrini, Antonio; Armstrong, Ben; Kenward, Mike G.
  • R code and data for: "Reducing and meta-analysing estimates from distributed lag non-linear models". (2017) Gasparrini, Antonio; Armstrong, Ben
  • R code and data for: "Temporal Variation in Heat–Mortality Associations: A Multicountry Study". (2017) Gasparrini, Antonio; Guo, Yuming; Hashizume, Masahiro; Kinney, Patrick L.; Petkova, Elisaveta P.; Lavigne, Eric; Zanobetti, Antonella; Schwartz, Joel D.; Tobias, Aurelio; Leone, Michela; Tong, Shilu; Honda, Yasushi; Kim, Ho; Armstrong, Ben G.
    • 2018
  • LSHTM Data Management Plan for Research Students. (2018) LSHTM Library & Archives Service
  • LSHTM Data Management Plan for research projects. (2018) LSHTM Library & Archives Service
  • migariane/CER_SEER_FL_RTvsCH: Cancer Survival Outcome among Stage I follicular Lymphoma Cancer Patients Treated with Monotherapy: Radiotherapy versus Systemic Treatment. (2018) Fung Lee, Shing; Ng, Ting Ying; Wong, Frank Chi Sing; Fernandez, Miguel Angel Luque
    • 15 January 2018
  • Socialmixr: Social Mixing Matrices for Infectious Disease Modelling. (2018) Funk, Sebastian
    • 1 February 2018
  • LSHTM Research Data Management Policy. (2018) LSHTM Library & Archives service
    • 5 March 2018
  • Type 2 Diabetes drug codelist. (2018) Wilkinson, Samantha; Douglas, Ian J.; Stirnadel-Farrant, Heide; Smeeth, Liam; Tomlinson, Laurie A. description
    • 22 March 2018
  • Code for "The relative fitness of drug resistant Mycobacterium tuberculosis: a modelling study of household transmission in Lima, Peru". (2018) Knight, Gwen
  • Comparison of different approaches for estimating age-specific alcohol-attributable mortality: The cases of France and Finland. (2018) Trias-Llimós, Sergi; Martikainen, Pekka; Mäkelä, Pia; Janssen, Fanny
    • 10 April 2018
  • ELISA Plate Washer. (2018) Roberts, Chrissy description
    • 14 May 2018
  • treespace: exploration of landscapes of phylogenetic trees. (2018) Jombart, Thibaut; Kendall, Michelle; Almagro-Garcia, Jacob; Colijn, Caroline
    • 13 June 2018
  • Farafenni INDEPTH Core Dataset 1982-2015 (Release 2018). (2018) Jasseh, Momodou; D'Alessandro, Umberto; Dondeh, Bai Lamin
    • 18 June 2018
  • MI-CC. (2018) Keogh, Ruth
    • 28 June 2018
  • Sensitivity analysis for missing data in cost-effectiveness analysis: Stata code. (2018) Leurent, Baptiste; Gomes, Manuel; Faria, Rita; Morris, Stephen; Grieve, Richard; Carpenter, James R.
    • 20 August 2018
  • Novel Wolbachia strains in Anopheles malaria vectors from Sub-Saharan Africa. (2018) Walker, Thomas
    • 11 September 2018
  • IDEAS project - Professional advice network study in Ethiopia. (2018) Sabot, Kate description
    • 17 September 2018
  • ruthkeogh/landmark_CF. (2018) Keogh, Ruth
    • 21 September 2018
  • BlantyreTBEpi. (2018) MacPherson, Peter; Khundi, McEwen; Nliwasa, Marriott; Choko, Augustine T.; Phiri, Vincent K.; Webb, Emily L.; Dodd, Peter J.; Cohen, Ted; Harris, Rebecca; Corbett, Elizabeth L.
    • 1 October 2018
  • DREAMS baseline study in young men aged 20-29 years in rural KwaZulu Natal, South Africa, 2006-2015. (2018) Herbst, Kobus; Pillay, Deenan; Baisley, Kathy; Barnighausen, Till; Koole, Olivier
    • 20 October 2018
  • PierreMasselot/Paper--2018--Aggregated_response_in_regression. (2018) Masselot, Pierre
    • 23 November 2018
  • obrady/Brazil_microcepahly_analysis_public. (2018) Brady, Oliver J.
    • 29 November 2018
  • EN-BIRTH Data Collection Tools. (2018) Day, Louise Tina; Ruysen, Harriet; Gordeev, Vladimir S.; Gore-langton, Georgia R.; Boggs, Dorothy; Cousens, Simon; Moxon, Sarah G.; Blencowe, Hannah; Baschieri, Angela; Rahman, Ahmed Ehsanur; Tahsina, Tazeen; Zaman, Sojib Bin; Hossain, Tanvir; Rahman, Qazi Sadeq-ur; Ameen, Shafiqul; Arifeen, Shams El; KC, Ashish; Shrestha, Shree Krishna; KC, Naresh P.; Singh, Dela; Jha, Anjani Kumar; Jha, Bijay; Rana, Nisha; Basnet, Omkar; Joshi, Elisha; Paudel, Asmita; Shrestha, Parashu Ram; Jha, Deepak; Bastola, Ram Chandra; Ghimire, Jagat Jeevan; Paudel, Rajendra; Salim, Nahya; Shamba, Donat; Manji, Karim; Shabani, Josephine; Shirima, Kizito; Mkopi, Namala; Mrisho, Mwifadhi; Manzi, Fatuma; Jaribu, Jennie; Kija, Edward; Assenga, Evelyne; Kisenge, Rodrick; Pembe, Andrea; Hanson, Claudia; Mbaruku, Godfrey; Masanja, Honorati; Lawn, Joy E.
  • EN-BIRTH Data Collector Training - Handbook and Manual. (2018) Day, Louise Tina; Ruysen, Harriet; Gordeev, Vladimir S.; Gore-langton, Georgia R.; Boggs, Dorothy; Cousens, Simon; Moxon, Sarah G.; Blencowe, Hannah; Baschieri, Angela; Rahman, Ahmed Ehsanur; Tahsina, Tazeen; Zaman, Sojib Bin; Hossain, Tanvir; Rahman, Qazi Sadeq-ur; Ameen, Shafiqul; Arifeen, Shams El; KC, Ashish; Shrestha, Shree Krishna; KC, Naresh P.; Singh, Dela; Jha, Anjani Kumar; Jha, Bijay; Rana, Nisha; Basnet, Omkar; Joshi, Elisha; Paudel, Asmita; Shrestha, Parashu Ram; Jha, Deepak; Bastola, Ram Chandra; Ghimire, Jagat Jeevan; Paudel, Rajendra; Salim, Nahya; Shamba, Donat; Manji, Karim; Shabani, Josephine; Shirima, Kizito; Mkopi, Namala; Mrisho, Mwifadhi; Manzi, Fatuma; Jaribu, Jennie; Kija, Edward; Assenga, Evelyne; Kisenge, Rodrick; Pembe, Andrea; Hanson, Claudia; Mbaruku, Godfrey; Masanja, Honorati; Lawn, Joy E.
  • EN-BIRTH Data Collector Training - Supporting Annexes. (2018) Day, Louise Tina; Ruysen, Harriet; Gordeev, Vladimir S.; Gore-langton, Georgia R.; Boggs, Dorothy; Cousens, Simon; Moxon, Sarah; Blencowe, Hannah; Baschieri, Angela; Rahman, Ahmed Ehsanur; Tahsina, Tazeen; Zaman, Sojib Bin; Hossain, Tanvir; Rahman, Qazi Sadeq-ur; Ameen, Shafiqul; Arifeen, Shams El; KC, Ashish; Shrestha, Shree Krishna; KC, Naresh P.; Singh, Dela; Jha, Anjani Kumar; Jha, Bijay; Rana, Nisha; Basnet, Omkar; Joshi, Elisha; Paudel, Asmita; Shrestha, Parashu Ram; Jha, Deepak; Bastola, Ram Chandra; Ghimire, Jagat Jeevan; Paudel, Rajendra; Salim, Nahya; Shamba, Donat; Manji, Karim; Shabani, Josephine; Shirima, Kizito; Mkopi, Namala; Mrisho, Mwifadhi; Manzi, Fatuma; Jaribu, Jennie; Kija, Edward; Assenga, Evelyne; Kisenge, Rodrick; Pembe, Andrea; Hanson, Claudia; Mbaruku, Godfrey; Masanja, Honorati; Lawn, Joy E.
  • EN-BIRTH Data Collector Training – Training Module material. (2018) Day, Louise Tina; Ruysen, Harriet; Gordeev, Vladimir S.; Gore-langton, Georgia R.; Boggs, Dorothy; Cousens, Simon; Moxon, Sarah G.; Blencowe, Hannah; Baschieri, Angela; Rahman, Ahmed Ehsanur; Tahsina, Tazeen; Zaman, Sojib Bin; Hossain, Tanvir; Rahman, Qazi Sadeq-ur; Ameen, Shafiqul; Arifeen, Shams El; KC, Ashish; Shrestha, Shree Krishna; KC, Naresh P.; Singh, Dela; Jha, Anjani Kumar; Jha, Bijay; Rana, Nisha; Basnet, Omkar; Joshi, Elisha; Paudel, Asmita; Shrestha, Parashu Ram; Jha, Deepak; Bastola, Ram Chandra; Ghimire, Jagat Jeevan; Paudel, Rajendra; Salim, Nahya; Shamba, Donat; Manji, Karim; Shabani, Josephine; Shirima, Kizito; Mkopi, Namala; Mrisho, Mwifadhi; Manzi, Fatuma; Jaribu, Jennie; Kija, Edward; Assenga, Evelyne; Kisenge, Rodrick; Pembe, Andrea; Hanson, Claudia; Mbaruku, Godfrey; Masanja, Honorati; Lawn, Joy E.
  • scrapR. (2018) Kucharski, Adam
    • 30 November 2018
  • outbreaker2: Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. (2018) Jombart, Thibaut; Campbell, Finlay; Fitzjohn, Richard
    • 11 December 2018
  • YLubell/SEA-CTN: surveillance-poct. (2018) Chandna, Arjun; White, L.J.; Pongvongsa, T; Mayxay, M; Newton, P.N.; Day, N.P.J.; Lubell, Yoel
    • 19 December 2018
  • Data from: Process evaluation of a national primary eye care programme in Rwanda. (2018) Yip, Jennifer L. Y.; Bright, Tess; Ford, Sebastian; Mathenge, Wanjiku; Faal, Hannah
    • 2019
  • Engagement in agricultural work is associated with reduced leisure time among Agta hunter-gatherers. (2019) Dyble, Mark; Thorley, Jack; Page, Abigail E.; Smith, Daniel; Migliano, Andrea Bamberg
  • Household air pollution in Nairobi's slums: A long-term policy evaluation using participatory system dynamics. (2019) Dianati, K.; Zimmermann, N.; Milner, James; Muindi, K.; Ezeh, A.; Chege, M.; Mberu, B.; Kyobutungi, C.; Fletcher, H.; Wilkinson, P.; Davies, M.
    • 5 January 2019
  • xiangfstats/GenieR: A final release. (2019) Xiang, Fei; Frost, Simon
    • 21 January 2019
  • PierreMasselot/hhws. (2019) Masselot, Pierre
    • 4 February 2019
  • A High-Resolution (0.25 degree) Historical Global Gridded Dataset of Climate Extreme Indices (1970-2016) using GLDAS data. (2019) Mistry, Malcolm Noshir
    • 9 February 2019
  • migariane/ColliderApp: ColliderAppLuque. (2019) Fernandez, Miguel Angel Luque; Schomaker, Michael; Redondo-Sanchez, Daniel; Perez, Maria Jose Sanchez; Vaidya, Anand; Schnitzer, Mireille E.
  • migariane/EASP_NET_SURV: Tutorial Net Survival. (2019) Fernandez, Miguel Angel Luque
    • 12 February 2019
  • migariane/Stillbirth: Analysis Stillbirth risk by SES in Spain. (2019) Fernandez, Miguel Angel Luque; Thomas, Aurielle; Gelaye, Bizu; Racape, Judith; Sanchez-Perez, Maria Jose; Williams, Michelle A.
    • 25 February 2019
  • Supplementary Table 1 from Cross-cultural evidence does not support universal acceleration of puberty in father-absent households. (2019) Sear, Rebecca; Sheppard, Paula; Coall, David A
    • 3 March 2019
  • anastasiachtz/COMMAND_stan/. (2019) Chatzilena, Anastasia; Van Leeuwen, Edwin
    • 14 March 2019
  • migariane/HETMOR-Causal-Inference: Effect Modification and Collapsibility in Evaluations of Public Health Interventions. (2019) Fernandez, Miguel Angel Luque; Redondo, Daniel
  • migariane/cvAUROC: Cross-validated AUC for Stata users. (2019) Fernandez, Miguel Angel Luque
    • 24 April 2019
  • extended data for protocol. (2019) Sabherwal, Shalinder
    • 8 May 2019
  • An experimental investigation of social preferences, their determinants and their role in the labour supply function. (2019) Smith, Richard
    • 22 May 2019
  • CEmimix Stata do-file - First version. (2019) Leurent, Baptiste; Gomes, Manuel; Cro, Suzie; Wiles, Nicola; Carpenter, James R.
    • 30 May 2019
  • Violence against children and natural disasters: A systematic review and meta-analysis of quantitative evidence. (2019) Cerna-turoff, Ilan; Fischer, Hanna-Tina; Mayhew, Susannah; Devries, Karen
    • 13 June 2019
  • PierreMasselot/Paper--2019--Air-pollution-warning-system. (2019) Masselot, Pierre
    • 21 June 2019
  • LSHTM-ORK/OBD. (2019) Roberts, Chrissy; LSHTM Global Health Analytics Group
    • 29 June 2019
  • SWPERMUTE: Stata module to compute Permutation tests for Stepped-Wedge Cluster-Randomised Trials. (2019) Thompson, Jennifer
    • 12 July 2019
  • mrc-ide/EpiEstim: 2.2-3. (2019) Cori, Anne; Kamvar, Zhian N.; Stockwin, Jake; Jombart, Thibaut; Thompson, Robin; Dahlqwist, Elisabeth
    • 17 July 2019
  • The SASA! study: a cluster randomised trial to assess the impact of a violence and HIV prevention programme in Kampala, Uganda. (2019) Watts, Charlotte; Devries, Karen; Kiss, Ligia; Abramsky, Tanya; Kyegombe, Nambusi; Michau, Lori
    • 29 July 2019
  • jstockwin/EpiEstimApp: v1.0.0. (2019) Stockwin, Jake; Thompson, Robin; Cori, Anne; Jombart, Thibaut; Kamvar, Zhian N.; FitzJohn, Rich
    • 8 August 2019
  • seabbs/ModelTBBCGEngland. (2019) Abbott, Sam
    • 9 August 2019
  • CSFLAM_data set revised. (2019) Kwizera, Richard; Cresswell, Fiona V.; Mugumya, Gerald; Okirwoth, Micheal; Kagimu, Enock; Bangdiwala, Ananta S.; Williams, Darlisha A.; Rhein, Joshua; Boulware, David R.; Meya, David B.
    • 13 September 2019
  • FluMoDL: Influenza-Attributable Mortality with Distributed-Lag Models. (2019) Lytras, Theodore; Gasparrini, Antonio; Wang, Shuangcai
    • 16 September 2019
  • gwenknight/empiricprescribing. (2019) Knight, Gwen
    • 26 September 2019
  • seabbs/EstZoonoticTB. (2019) Abbott, Sam
    • 7 October 2019
  • gasparrini/2019_armstrong_EHP_Rcodedata. (2019) Gasparrini, Antonio
    • 25 October 2019
  • sbfnk/epimixr. (2019) Funk, Sebastian
    • 28 November 2019
  • seabbs/SpeedyMarkov. (2019) Abbott, Sam
    • 29 November 2019
  • convertCMC: Convert century month codes to Stata dates. (2019) Timaeus, Ian
    • 12 December 2019
  • denvax: Simple Dengue Test and Vaccinate Cost Thresholds. (2019) Pearson, Carl; Abbas, Kaja M.; Clifford, Samuel; Flasche, Stefan; Hladish, Thomas J.
    • 19 December 2019
  • Code for simulating release of Wolbachia mosquitoes in Indonesia and assessing their cost effectiveness in different places over time. (2019) Brady, Oliver J.; Bastos, Leonardo
  • obrady/Wolbachia_CE. (2019) Brady, Oliver J.; Bastos, Leonardo
    • 29 January 2020
  • Every Newborn INDEPTH (EN-INDEPTH) Study - Additional Materials. (2020) Lawn, Joy E.; Waiswa, Peter; Waiswa, Joseph Akuze; Kwesiga, Doris; Blencowe, Hannah; Baschieri, Angela; Gordeev, Vladimir S.; EN-INDEPTH Collaborator Group grid_on
    • 5 February 2020
  • Microscope Smartphone Adapter (Customisable). (2020) Roberts, Chrissy description
    • 7 February 2020
  • Female Reproductive System. (2020) Roberts, Chrissy
    • 11 February 2020
  • The DIPLOMATIC Collaboration, Work Package2_Coredata Set. (2020) von Wissmann, Beatrix; Gadama, Luis; Dube, Queen; Membe-Gadama, Gladys; Stock, Sarah; Chodzaza, Elizabeth; Masesa, Clemens; Crampin, Amelia C.; Wood, Rachael
    • 12 February 2020
  • Multi-Country Model Application for RSV Cost-Effectiveness Policy (McMarcel). (2020) Willem, Lander; Xiao, Li; Antillon, Marina; Bilcke, Joke; Jit, Mark; Beutels, Philippe
    • 19 February 2020
  • cmmid/ringbp. (2020) Hellewell, Joel
    • 20 February 2020
  • timriffe/MacroShape. (2020) Riffe, Tim; Aburto, José Manuel
    • 6 April 2020
  • akira-endo/COVID19_clustersize: Estimating the amount of superspreading using outbreak sizes of COVID-19 outside China. (2020) Endo, Akira; Abbott, Sam; Kucharski, Adam J.; Funk, Sebastian
    • 17 April 2020
  • Supplementary data for “Comparisons of Staphylococcus aureus infection and other outcomes between users of angiotensin-converting-enzyme inhibitors and angiotensin II receptor blockers: lessons for COVID-19 from a nationwide cohort study”. (2020) Tomlinson, Laurie A.; Iwagami, Masao; Bidulka, Patrick; Wong, Angel Y.S.
    • 22 April 2020
  • Religion, Cooperation, Fertility, and Child Outcomes. (2020) Shaver, John; Power, Eleanor A.; Purzycki, Benjamin Grant; Shenk, Mary K; Bulbulia, Joseph A.; Sear, Rebecca; Sosis, Richard; Watts, Joseph
    • 18 May 2020
  • Anonymised data for: "Predictors of change of health workers’ knowledge and skills after the Helping Mothers Survive Bleeding after Birth (HMS BAB) in-facility training in Tanzania". (2020) Alwy Al-beity, Fadhlun; Pembe, Andrea Barnabas; Marrone, Gaetano; Baker, Ulrika; Hanson, Claudia
    • 20 May 2020
  • adegenet: Exploratory Analysis of Genetic and Genomic Data. (2020) Jombart, Thibaut; Kamvar, Zhian N.; Collins, Caitlin; Luštrik, Roman; Beugin, Marie-Pauline; Knaus, Brian J; Solymos, Peter; Mikryukov, Vladimir; Schliep, Klaus; Maié, Tiago; Morkovsky, Libor; Ahmed, Ismail; Cori, Anne; Calboli, Federico; Ewing, RJ; Michaud, Frédéric; DeCamp, Rebecca; Courtiol, Alexandre
    • 3 June 2020
  • ISAC Protocol 17_197R: The effect of renin-angiotensin system inhibitors on haemoglobin. (2020) Mansfield, Kathryn E.; Nitsch, Dorothea; Smeeth, Liam; Iwagami, Masao; Johnston, Rosalynd; Tomlinson, Laurie A.
    • 11 June 2020
  • Detection of a novel insect-specific flavivirus across ecologically diverse populations of Aedes aegypti on the Caribbean Island of Saint Lucia. (2020) Walker, Thomas; Jeffries, Claire L.; Yakob, Laith; White, Mia; Wilson, Louisia
  • idmodelr: Infectious Disease Model Library and Utilities. (2020) Abbott, Sam; Endo, Akira
  • seabbs/getTBinR. (2020) Abbott, Sam; Bekker-Nielsen Dunbar, Maria; Smith, Arfon
    • 17 June 2020
  • LSHTM-ORK/EDK_Automation_Tools. (2020) Roberts, Chrissy; LSHTM Global Health Analytics Group
  • sbfnk/rbi.helpers. (2020) Funk, Sebastian; Finger, Flavio
    • 25 June 2020
  • sysbio-curie/exact-stoch-log-mod. (2020) Koltai, Mihály
    • 2 July 2020
  • LSHTM-ORK/OpenMakingKit. (2020) Roberts, Chrissy; LSHTM Global Health Analytics Group
    • 10 August 2020
  • tomsumner/Latency_Model_Comparison_Public. (2020) Sumner, Tom
    • 28 August 2020
  • Data for: "Foot thermometry with mHeath-based supplementation to prevent diabetic foot ulcers: A randomized controlled trial". (2020) Lazo-Porras, Maria; Bernabe-Ortiz, Antonio; Taype-Rondan, Alvaro; Gilman, Robert H.; Malaga, German; Manrique, Helard; Neyra, Luis; Calderon, Jorge; Pinto, Miguel; Armstrong, David G.; Montori, Victor M.; Miranda, J. Jaime
    • 11 September 2020
  • gasparrini/2017_lopezbernal_IJE_codedata. (2020) Lopez-Bernal, James; Cummins, Steven; Gasparrini, Antonio
    • 21 September 2020
  • kaitejohnson/School_reopening. (2020) Johnson, Kaitlyn E.
    • 24 September 2020
  • CLAN: Stata module to perform cluster-level analysis of cluster randomised trials. (2020) Nash, Stephen; Thompson, Jennifer; Leurent, Baptiste
    • 25 September 2020
  • Comparison of small-sample standard-error corrections for generalised estimating equations in stepped wedge cluster randomised trials with a binary outcome: A simulation study. (2020) Thompson, Jennifer
    • 1 October 2020
  • akira-endo/COVID19_backwardtracing. (2020) Endo, Akira; Kucharski, Adam J.
    • 6 October 2020
  • COVID-SCORE: A global survey to assess public perceptions of government responses to COVID-19 (COVID-SCORE-10). (2020) Lazarus, Jeffrey V.; Ratzan, Scott; Palayew, Adam; Billari, Francesco C.; Binagwaho, Agnes; Kimball, Spencer; Larson, Heidi J.; Melegaro, Alessia; Rabin, Kenneth; White, Trenton M.; El-Mohandes, Ayman
    • 9 November 2020
  • Kleborate v2.0.0. (2020) Holt, Kathryn E.; Lam, Margaret; Wick, Ryan
    • 20 November 2020
  • Crimean-congo haemorrhagic fever virus detected in Rhipicephalus ticks feeding on cattle in an abattoir, Uganda. (2020) Stubbs, Sam
    • 25 November 2020
  • PierreMasselot/Sedimentation_analysis. (2020) Masselot, Pierre
    • 27 November 2020
  • johntaz/COVID-Collateral. (2020) Tazare, John
    • 30 November 2020
  • ptti/ptti: Modelling the health and economic impacts of different testing and tracing strategies for COVID-19 in the UK. (2020) Colbourn, Tim; Waites, William; Manheim, David; Sturniolo, Simone; Kerr, Cliff C.; Panovska-Griffiths, Jasmina; Colbourn, Greg
    • 11 December 2020
  • o2geosocial. (2020) Robert, Alexis; Funk, Sebastian; Kucharski, Adam J.
    • 2021
  • ReproducibiliTea LSHTM. (2021) Jaquiery, Matt; Schultze, Anna
  • WINRATIOTEST: Stata module to calculate the unmatched Win Ratio for prioritised outcomes. (2021) Gregson, John; Collier, Timothy
    • 7 January 2021
  • supingling/glycaemic-control. (2021) Ling, Suping
    • 8 January 2021
  • Supplementary Appendix 1b of "Optimizing geographical accessibility to primary health care at community level in Niger: a geospatial analysis". (2021) Oliphant, Nicholas P; Ray, Nicolas; Bensaid, Khaled; Ouedraogo, Adama; Gali, Asma Yaroh; Habi, Oumarou; Maazou, Ibrahim; Panciera, Rocco; Muñiz, Maria; Manda, Samuel OM; Sy, Zeynabou; Jackson, Debra; Doherty, Tanya
    • 14 January 2021
  • cmmid/SA2UK. (2021) Pearson, Carl A. B.; Russell, Timothy W.; Kucharski, Adam J.
    • 26 January 2021
  • BugBunny/Pathways_to_Low_Fertility. (2021) Timaeus, Ian
    • February 2021
  • martyn1fyles/HouseholdContactTracing. (2021) Abbott, Sam; Fyles, Martyn
    • 5 February 2021
  • PierreMasselot/primr. (2021) Masselot, Pierre
    • 10 March 2021
  • Projecting the risk of mosquito-borne diseases in a warmer and more urbanised world: a multi-model multi-scenario intercomparison study. (2021) Colón-González, Felipe J; Sewe, Maquins Odhiambo; Tompkins, Adrian M; Sjödin, Henrik; Casallas, Alejandro; Rocklöv, Joacim; Caminade, Cyril; Lowe, Rachel
    • 17 March 2021
  • katholt/sonneityping: v20210201. (2021) Holt, Kathryn E.; Hawkey, Jane; Paranagama, Kalani
    • 19 March 2021
  • A Comparison of Different Community Models of ART Delivery Amongst Stable HIV+ Patients in two Urban Settings in Zambia - Study Protocol. (2021) Limbada, Mohammed; Ayles, Helen; Macleod, David picture_as_pdf
  • LSHTM Data Compass Procedures. (2021) LSHTM Library & Archives Service
    • 25 March 2021
  • CEmimix ADO file. (2021) Leurent, Baptiste; Cro, Suzie
    • 29 March 2021
  • ISAC Protocol 19_129 - Common infections and incident dementia: a historical cohort study using UK primary and secondary care data. (2021) Muzambi, Rutendo; Bhaskaran, Krishnan; Brayne, Carol; Chaturvedi, Nish; Smeeth, Liam; Warren-Gash, Charlotte
  • Validation of Correlates of Risk of TB Disease in High Risk Populations (CORTIS-HR) Study: Public, subject-level RISK11 signature scores and metadata. (2021) Mendelsohn, Simon C; Fiore-Gartland, Andrew; Penn-Nicholson, Adam; Mulenga, Humphrey; Kimbung, Stanley; Borate, Bhavesh; Hadley, Katie; Hikuam, Chris; Musvosvi, Munyaradzi; Bilek, Nicole; Erasmus, Mzwandile; Jaxa, Lungisa; Raphela, Rodney; Nombida, Onke; Kaskar, Masooda; Sumner, Tom; White, Richard G; Innes, Craig; Brumskine, William; Hiemstra, Andriëtte; Malherbe, Stephanus T; Hassan-Moosa, Razia; Tameris, Michèle; Walzl, Gerhard; Naidoo, Kogieleum; Churchyard, Gavin; Scriba, Thomas J; Hatherill, Mark
    • 30 March 2021
  • NickyMcC/WithinClinics. (2021) McCreesh, Nicky
    • 1 April 2021
  • Additional file 2 of Complex emergencies and the control and elimination of neglected tropical diseases in Africa: developing a practical approach for implementing safe and effective mapping and intervention strategies. (2021) Kelly-Hope, Louise A.; Sanders, Angelia M.; Harding-Esch, Emma; Willems, Johan; Ahmed, Fatima; Vincer, Fiona; Hill, Rebecca
    • 12 April 2021
  • Eyedeet/Systematic_review. (2021) Suffel, Anne Marie
    • 13 April 2021
  • Additional file 2 of Comparative diagnostic accuracy studies with an imperfect reference standard – a comparison of correction methods. (2021) Umemneku Chikere, Chinyereugo M; Wilson, Kevin J; Allen, A Joy; Vale, Luke
    • 27 April 2021
  • Healthcare use by people who use illicit opioids (HUPIO): development of a cohort based on electronic primary care records in England (extended data). (2021) Lewer, Dan; Padmanathan, Prianka; Arfeen, Muhammad Najam Ul; Denaxas, Spiros; Forbes, Harriet; Gonzalez-Izquierdo, Arturo; Hickman, Matt
    • 30 April 2021
  • johntaz/HDPS-Diagnostics. (2021) Tazare, John
    • 5 May 2021
  • BayesSUR: Bayesian Seemingly Unrelated Regression. (2021) Banterle, Marco; Zhao, Zhi; Bottolo, Leonardo; Richardson, Sylvia; Leoncio, Waldir; Lewin, Alexandra; Zucknick, Manuela; Zhao, Zhi
  • Supplementary data files & video for Carrasco-Tenezaca published in the Journal of the Royal Society Interface, 'The relationship between house height and mosquito house entry: an experimental study in rural Gambia. (2021) Lindsay, Steve; Carrasco-Tenezaca, Majo; Jawara, Musa; Bradley, John; D'Alessandro, Umberto; Jeffries, David; Pinder, Margaret; Knudsen, Jakob
    • 24 May 2021
  • WOMAN-PharmacoTXA Trial: Pharmacokinetics and pharmacodynamics of tranexamic acid in women having caesarean section birth - Extended data. (2021) Shakur-Still, Haleema; Arribas, Monica; Roberts, Ian; Chaudhri, Rizwana; Geer, Amber; Prowse, Danielle; Lubeya, Mwansa Ketty; Kayani, Aasia; Javaid, Kiran; Grassin Delyle, Stanislas description
    • 5 June 2021
  • johntaz/HDPS-Stata-Demo. (2021) Tazare, John
    • 6 June 2021
  • Additional file 1 of A framework for handling missing accelerometer outcome data in trials. (2021) Tackney, Mia S.; Cook, Derek G.; Stahl, Daniel; Ismail, Khalida; Williamson, Elizabeth; Carpenter, James
    • 7 June 2021
  • CoMix social contact data (UK). (2021) Gimma, Amy; Wong, Kerry LM; Van Xandvoort, Kevin; Jarvis, Christopher I.; Edmunds, W. John
    • 16 June 2021
  • PierreMasselot/emdr. (2021) Masselot, Pierre
  • Supplemental material for: The Long and Winding Road: Archiving and Re-Using Qualitative Data from 12 Research Projects Spanning 16 Years. (2021) Dodds, Catherine; Keogh, Peter; Bourne, Adam; McDaid, Lisa; Squire, Corinne; Weatherburn, Peter; Young, Ingrid
    • 20 June 2021
  • katholt/srst2. (2021) Inouye, Michael; Dashnow, Harriet; Pope, Bernie; Wick, Ryan; Holt, Kathryn E.
    • 21 June 2021
  • Optimising health and economic impacts of COVID-19 vaccine rollout strategies in the WHO European Region. (2021) Liu, Yang; Sandmann, Frank G.; Barnard, Rosanna C.; Pearson, Carl A.B.; CMMID Working-19 Working Group; Pastore, Roberta; Pebody, Richard; Flasche, Stefan; Jit, Mark
    • 9 July 2021
  • Analysis for: The changing relationship between genetic risk and cognitive decline across birth cohorts. (2021) Courtin, Emilie; Greener, Robert; Weiss, Jordan; Ware, Erin B.; Dowd, Jennifer B.; Rehkopf, David
    • 10 July 2021
  • mexhaz: Mixed Effect Excess Hazard Models. (2021) Charvat, Hadrien; Belot, Aurélien
    • 15 July 2021
  • CSV-format data for: Increased mortality in community-tested cases of SARS-CoV-2 lineage B.1.1.7. (2021) Davies, Nicholas G.
    • 20 July 2021
  • nicholasdavies/amr-competition-diversity: Full release for publication. (2021) Davies, Nicholas G.
    • 21 July 2021
  • gwenknight/hai_first_wave. (2021) Knight, Gwen
    • 28 July 2021
  • opensafely/anticoagulants-research. (2021) Wong, Angel; Bacon, Seb; Walker, Alex; Davy, Simon; Inglesby, Peter; MacKenna, Brian
    • 9 August 2021
  • Code to replicate "Quantifying impacts of the COVID-19 pandemic through life expectancy losses". (2021) Aburto, José Manuel; Schöley, Jonas; Kashnitsky, Ilya; Knowles, Ian; Zhang, Luyin; Rahal, Charles; Missov, Trifon I; Dowd, Jennifer B; Mills, Melinda C; Kashyap, Ridhi
    • 12 August 2021
  • LSHTM-ORK/ODK_Biometrics. (2021) Roberts, Chrissy; Stott, Callum
  • yangclaraliu/armslist_scraping. (2021) Drake, Coleman; Hernandez, Ashley; Liu, Yang; Schwartz, Adam H.; Sundaram, Maria
    • 16 August 2021
  • reichlab/covidHubUtils. (2021) Wang, Serena Yijin; Stark, Ariane; Evan Ray; Bosse, Nikos; Reich, Nicholas G; Sherratt, Katharine; Shah, Apurv; Wattanachit, Nutcha; Khoale1096; Huang, Yuxin David; Gerding, Aaron; Gruson, Hugo; Cramer, Estee; Shandross, Li; Abbott, Sam; Funk, Sebastian
    • 23 August 2021
  • Analysis of non-communicable disease reports contributing to UN high-level meeting process (2000-2020). (2021) Millington, James; Okpako, Oritsematosan; Herrick, Clare
  • MatchThem: Matching and Weighting Multiply Imputed Datasets. (2021) Pishgar, Farhad; Greifer, Noah; Leyrat, Clemence; Stuart, Elizabeth
    • 26 August 2021
  • NickyMcC/CasualAgeMixing. (2021) Mccreesh, Nicky
    • 6 September 2021
  • petedodd/NotTB. (2021) Dodd, Peter J
    • 11 September 2021
  • o2geosocial: Reconstruction of Transmission Chains from Surveillance Data. (2021) Robert, Alexis; Funk, Sebastian; Kucharski, Adam J.; Jombart, Thibaut
    • 14 September 2021
  • d-mayerova/Vaccine_confidence_Albania. (2021) Mayerová, Daniela; Abbas, Kaja M.
    • 21 September 2021
  • ropensci/drake. (2021) Landau, Will; Landau, Will; Bond-Lamberty, Ben; Strasiotto, Matthew; McBain, Miles; Müller, Kirill; Mahr, TJ; Hughes, Ellis; Ross, Noam; Bell, Kendon; Ingerson, Sean; Aden-Buie, Garrick; Gomolka, Matthias; Knoblauch, Nicholas; Albers, Sam; brendanf; evalparse; Denney, Bill; Muir, Chris; Barrett, Malcolm; Krug, Rainer M; Kehayas, Vassilis; Schratz, Patrick; Zhao, Bruce; Hlynur; Gruson, Hugo; Jasper; Ooms, Jeroen; Walthert, Lorenz; Dray, Matt
    • 6 October 2021
  • Decision Modelling for Health Economic Evaluation R Code. (2021) Williams, Jack; Naylor, Nichola; Briggs, Andrew
    • 29 October 2021
  • hamishgibbs/ghana_rt_npi_mobility. (2021) Gibbs, Hamish
    • 1 November 2021
  • STATA Do files for "Factors associated with excess mortality in the first wave of COVID-19 pandemic in the UK: a cohort analysis using the Clinical Practice Research Databank". (2021) Strongman, Helen; Carreira, Helena folder_zip
    • 6 November 2021
  • PierreMasselot/Paper--2021--JRSS_SA--Machine_Learning_Thresholds. (2021) Masselot, Pierre
    • 15 November 2021
  • Replication Data for: Mortality in rural coastal Kenya measured using the Kilifi Health and Demographic Surveillance System: a 16-year descriptive analysis. (2021) Otiende, Mark; Bauni, Evasius; Nyaguara, Amek; Amadi, David; Nyundo, Christopher; Tsory, Emmanuel; Walumbe, David; Kinuthia, Michael; Kihuha, Norbert; Kahindi, Michael; Nyutu, Gideon; Moisi, Jennifer; Deribew, Amare; Agweyu, Ambrose; Marsh, Kevin; Tsofa, Benjamin; Bejon, Philip; Bottomley, Christian; Williams, Thomas N; Scott, J Anthony G
    • 25 November 2021
  • epiforecasts/epinowcast. (2021) Abbott, Sam; Monticone, Pietro
  • supingling/overtreatment. (2021) Ling, Suping
    • 6 December 2021
  • r-spatialecology/shar. (2021) Hesselbarth, Maximilian; actions-user; Sciaini, Marco; Hereñú, Darío; Gruson, Hugo; Etherington, Thomas
    • 14 December 2021
  • jarvisc1/2020-reporting. (2021) Jarvis, Christopher I.; Jombart, Thibaut
    • 15 December 2021
  • Extended Data: Iron supplementation of breastfed Gambian infants from 6 weeks to 6 months of age: Protocol for a randomised controlled trial. (2021) Stelle, Isabella; Bah, Mamadou; Silverio, Sergio A.; Verhoef, Hans; Comma, Ebrima; Prentice, Andrew M.; Moore, Sophie E.; Cerami, Carla
    • 16 December 2021
  • liang-yu12/vd_covid. (2021) Lin, Liang Yu
    • 23 December 2021
  • SoCFourier. (2021) Silver, Matt description
    • 5 January 2022
  • emilyherrett/qrisk_cprd_aurum: QRISK Aurum bundle version 2.0. (2022) Davidson, Jennifer; Herrett, Emily; Strongman, Helen; Gadd, Sarah
    • 6 January 2022
  • AntonS-bio/entropy. (2022) Spadar, Anton
    • 7 January 2022
  • esnightingale/covid_deaths_spatial. (2022) Nightingale, Emily
    • 24 January 2022
  • Genome details for the simulated-read tests. (2022) Wick, Ryan R.; Holt, Kathryn E.
    • 25 January 2022
  • epiforecasts/covid19-hospital-activity. (2022) Meakin, Sophie; Abbott, Sam
  • weerasuriya/tbconvax-pcb. (2022) Weerasuriya, Chathika Krishan
    • 26 January 2022
  • gwenknight/strain_growth. (2022) Knight, Gwen; Baede, Valérie O.
    • 28 January 2022
  • metasens: Statistical Methods for Sensitivity Analysis in Meta-Analysis. (2022) Schwarzer, Guido; Carpenter, James R.; Rücker, Gerta
    • 30 January 2022
  • Dataset used in the assessment of the article "Basic urban services fail to neutralise environmental determinants of 'rattiness', a composite metric of rat abundance". (2022) Carvalho-Pereira, Ticiana; Eyre, Max T; Zeppelini, Caio G; Espirito Santo, Vivian F; Santiago, Diogo C; Santana, Roberta; Palma, Fabiana; Reis, Marbrisa; Lustosa, Ricardo; Khalil, Hussein; Diggle, Peter J; Giorgi, Emanuele; Costa, Federico; Begon, Michael
    • 2 February 2022
  • francesccoll/powerbacgwas. (2022) Coll, Francesc
    • 4 February 2022
  • Participatory Visual Methods with caregivers of children with Congenital Zika Syndrome in Colombia: A case study. (2022) Reichenberger, Veronika description
    • 8 February 2022
  • zadyson/TyphiNET. (2022) Cerdeira, Louise; Dyson, Zoe Anne
    • 15 February 2022
  • Landmarking: Analysis using Landmark Models. (2022) Barrott, Isobel; Barrett, Jessica; Keogh, Ruth; Sweeting, Michael; Stevens, David
    • 16 February 2022
  • Stata Do Files for pooling and analysis. (2022) Sweeney, Sedona
    • 18 February 2022
  • Omran revisited. (2022) Sudharsanan, Nikkil; Aburto, José Manuel; Riffe, Tim; van Raalte, Alyson
  • alexlewin24/BLSEM. (2022) Wheater, Stuart; Lewin, Alex
    • 28 February 2022
  • Additional file 1 of Locating and testing the healthy context paradox: examples from the INCLUSIVE trial. (2022) Melendez-Torres, G. J.; Warren, Emily; Ukoumunne, Obioha C; Viner, Russell; Bonell, Chris
    • 1 March 2022
  • dchodge/hero-study: Version submitted with WOR reviewers comments. (2022) Hodgson, David; Abbott, Sam
    • 9 March 2022
  • skiniry/Trips-Viz. (2022) Kiniry, Stephen J; Judge, Ciara
    • 13 March 2022
  • jenAdavidson/sccs_fluvacc_cvd. (2022) Davidson, Jennifer
    • 21 March 2022
  • qleclerc/mrsa_phage_dynamics. (2022) Leclerc, Quentin J.
    • 31 March 2022
  • jmaburto/ex_USA_racial-ethnic_differences. (2022) Aburto, José Manuel
    • 7 April 2022
  • erees/leptoSerology. (2022) Rees, Eleanor
    • 11 April 2022
  • Social contact data for Taiwan. (2022) Fu, Yang-Chih; Wang, Da-Wei; Chuang, Jen-Hsiang; Fu, Han
    • 14 April 2022
  • katholt/RedDog. (2022) d-j-e; Holt, Kathryn E.; Wyres, Kelly L
    • 19 April 2022
  • Additional file 1 of Planning a method for covariate adjustment in individually randomised trials: a practical guide. (2022) Morris, Tim P.; Walker, A. Sarah; Williamson, Elizabeth J.; White, Ian R.
  • Additional file 2 of Planning a method for covariate adjustment in individually randomised trials: a practical guide. (2022) Morris, Tim P.; Walker, A. Sarah; Williamson, Elizabeth J.; White, Ian R.
    • 28 April 2022
  • PierreMasselot/Paper--2022--EE--Heat_climate. (2022) Masselot, Pierre
    • 4 May 2022
  • FJRubio67/LBANS/. (2022) Eletti, Alessia; Marra, Giampiero; Quaresma, Manuela; Radice, Roslaba; Rubio, Francisco J
    • 9 May 2022
  • epiverse-trace/linelist. (2022) Jombart, Thibaut
  • kasimallel/Modelling-analysing-GN-ABR-for-transmission-in-a-Chilean-semi-rural-community. (2022) Allel, Kasim
    • 11 May 2022
  • mrc-ide/covid-vaccine-impact-orderly. (2022) Barnsley, Gregory; Watson, Oliver J
    • 17 May 2022
  • epiforecasts/scoringutils. (2022) Bosse, Nikos; Abbott, Sam; Reich, Nicholas G; Funk, Sebastian
    • 19 May 2022
  • Female Genital Schistosomiasis - Medical Training Device. (2022) Roberts, Chrissy; Bustinduy, Amaya
  • Swabbable Vagina and Vulva - Medical training device. (2022) Roberts, Chrissy; Bustinduy, Amaya
    • 20 May 2022
  • Supplementary appendix 1b of Oliphant NP, Ray N, Curtis A et al. Optimising scale and deployment of community health workers in Sierra Leone: a geospatial analysis. 2022. (2022) Oliphant, NP; Ray, Nicolas; Curtis, Andrew; Musa, Elizabeth; Sesay, Momodou; Kandeh, Joseph; Kamara, Anitta; Chimoun, Ebeny Francois Temgbait; Jackson, Debra; Doherty, Tanya
    • 22 May 2022
  • emiliecourtin/maternityleave. (2022) Courtin, Emilie
    • 25 May 2022
  • TBVAX Model. (2022) Clark, Rebecca; Mukandavire, Christinah; Weerasuriya, Chathika; Bakker, Roelof; White, Richard G
  • zadyson/SNV_Stats_Generator. (2022) Dyson, Zoe Anne
    • 1 June 2022
  • Additional Data and Code from "Increased energy use for adaptation significantly impacts mitigation pathways". (2022) Colelli, Francesco Pietro; Emmerling, Johannes; Mistry, Malcolm; Marangoni, Giacomo; De Cian, Enrica
    • 7 June 2022
  • tomsumner/Variance_SA_TB. (2022) Sumner, Tom
    • 8 June 2022
  • ALPHA HIV Incidence and Mortality Data, Kisesa 1994-2016. (2022) Kisesa HIV Open Cohort study; ALPHA Network
    • 13 June 2022
  • LinaMadaniyazi/Assessing-seasonality-and-the-role-of-its-potential-drivers-in-environmental-epidemiology-a-tutorial. (2022) Madaniyazi, Lina; Tobias, Aurelio; Kim, Yoonhee; Chung, Yeonseung; Armstrong, Ben; Hashizume, Masahiro
    • 15 June 2022
  • chrissyhroberts/OMR_LSHTM. (2022) Roberts, Chrissy
    • 21 June 2022
  • Duration of protection of CoronaVac plus heterologous BNT162b2 booster in the Omicron period in Brazil. (2022) Cerqueira-Silva, Thiago; de Araujo Oliveira, Vinicius; Paixão, Enny S.; Júnior, Juracy Bertoldo; Penna, Gerson O.; Werneck, Guilherme L.; Pearce, Neil; Barreto, Maurício L.; Boaventura, Viviane S.; Barral-Netto, Manoel
  • NaomiWaterlow/NhaTrang_flu_rsv_interaction. (2022) Waterlow, Naomi
  • fkrauer/RSV-seasonality-public. (2022) Krauer, Fabienne
    • 24 June 2022
  • raphaelvallat/pingouin. (2022) Vallat, Raphael; Appelhoff, Stefan; Spaak, Eelke; JElfner; systole-docs; Tan, Gansheng; Paulino, Arthur; Dominic C.; Leicas; Nárai, Ádám; Wallan, Samuel; Barthélemy, Quentin; Weixin, Jin; Singaravelan, Karthikeyan; Crabtree, Kyle N.; Punčochář, Michal; Legrand, Nicolas; Jolly, Eshin; Cederstrand, Erik; To, Isaac; Hale, Jeff; Kahle, Michal; Mathot, Sebastiaan; Wase, Viktor; Filipec, Vojtech; gedeck; Libiseller-Egger, Julian; xfz329
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  • Mapping the evidence of plant-based alternative foods: A systematic literature review protocol on nutritional, health, and environmental impacts. (2022) Nájera Espinosa, Sarah; Pastorino, Silvia; Scheelbeek, Pauline
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  • Additional file 2 of Cluster randomised trials with a binary outcome and a small number of clusters: comparison of individual and cluster level analysis method. (2022) Thompson, Jennifer A.; Leyrat, Clemence; Fielding, Katherine L.; Hayes, Richard J.
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  • akira-endo/schooldynamics_FluMatsumoto14-15: Simulating respiratory disease transmission within and between classrooms to assess pandemic management strategies at schools. (2022) Endo, Akira; Uchida, Mitsuo; Liu, Yang; Atkins, Katherine E.; Kucharski, Adam J.; Funk, Sebastian
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  • Estimating national-level measles case–fatality ratios in low-income and middle-income countries: an updated systematic review and modelling study. (2022) Sbarra, Alyssa N.; Mosser, Jonathan F; Jit, Mark; Ferrari, Matthew; Ramshaw, Rebecca E.; O'Connor, Patrick; Krause, L Kendall; Rogowski, Emma LB; Portnoy, Allison
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  • Additional file 1 of Inequalities in the impact of COVID-19-associated disruptions on tuberculosis diagnosis by age and sex in 45 high TB burden countries. (2022) McQuaid, C. Finn; Henrion, Marc Y. R.; Burke, Rachael M.; MacPherson, Peter; Nzawa-Soko, Rebecca; Horton, Katherine C.
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  • Relative role of border restrictions, case finding and contact tracing in controlling SARS-CoV-2 in the presence of undetected transmission: a mathematical modelling study. (2023) Pung, Rachael; Clapham, Hannah E; Russell, Timothy W.; Lee, Vernon J.; Kucharski, Adam J.
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  • tjhladish/covid-abm: Active Vaccination Experiment 2023-02-02. (2023) Pillai, Alexander N.; Hladish, Thomas; Pearson, Carl A. B.; Toh, Ben; Noah4944; Stoltzfus, Arlin
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  • Effectiveness of BNT162b2 and ChAdOx1 against SARS-CoV-2 household transmission. (2023) Clifford, Samuel; Hackman, Jada
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    • 10 February 2023
  • Supplementary material from "A biphasic model of lifespan in nematode Caenorhabditis elegans worm". (2023) Mulla, Suhayl; Ludlam, Adele R.; Elragig, Aiman; Slack, Cathy; Balklava, Zita; Stich, Michael; Cheong, Alex
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  • SADD synthetic cost-effectiveness dataset. (2023) Leurent, Baptiste
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  • Shielding individuals at high risk of COVID-19: a micro-simulation study. Model and analyses. (2023) Van Zandvoort, Kevin; Checchi, Francesco
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  • Impact of vaccinations, boosters and lockdowns on COVID-19 waves in French Polynesia. (2023) Chapman, Lloyd A.C.; Aubry, Maite; Maset, Noemie; Russell, Timothy; Knock, Edward S; Lees, John A; Mallet, Henri-Pierre; Cao-Lormeau, Van-Mai; Kucharski, Adam J.
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  • Local and long-distance migration among young people in rural Malawi: importance of age, sex and family (author-writter code). (2023) Mclean, Estelle
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  • Data and R-code to accompany 'Towards an Early Warning System for Leptospirosis in North-Eastern Argentina'. (2023) Lotto Batista, Martín; Rees, Eleanor M.; Gómez, Andrea; López, Soledad; Castell, Stefanie; Kucharski, Adam J.; Ghozzi, Stéphane; Müller, Gabriela V; Lowe, Rachel
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  • wtm-leung/Network-modelling-review: Network modelling review v1.0.0. (2023) Leung, William T. M.
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  • Microclimate dataset of the SAFE project landscape. (2023) Jucker, Tommaso; Hardwick, Stephen R; Both, Sabine; Elias, Dafydd MO; Ewers, Robert M; Milodowski, David T; Saager, Elise; Iwamura, Takuya; Murray, Kris; Swinfield, T; Coomes, David A
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  • epiforecasts/transformation-forecast-evaluation. (2023) Bosse, Nikos; Bracher, Johannes; Abbott, Sam; Funk, Sebastian
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  • DidDrog11/arenavirus_hantavirus_app. (2023) Simons, David
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  • Restricted Randomisation Procedure and codes–inSCALE Mozambique. (2023) Soremekun, Seyi; Källander, Karin; Lingam, Raghu; Branco, Ana-Cristina Castel; Batura, Nehu; Strachan, Daniel Ll; Muiambo, Abel; Salomao, Nelson; Condoane, Juliao; Benhane, Fenias; Kasteng, Frida; Vassall, Anna; Hill, Zelee; ten Asbroek, Guus; Meek, Sylvia; Tibenderana, James; Kirkwood, Betty
  • SHINE 7-year Follow-up. (2023) Piper, Joseph; Ntozini, Robert; Prendergast, Andrew
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  • grahams99/Enhanced_surveillance_questionnaire. (2023) Graham, Sophie
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  • francescochecchi/yem_diaspora_mortality. (2023) Checchi, Francesco
    • 11 July 2023
  • kieshaprem/hpv-1-dose: First release of the HPV 1-dose global repository. (2023) Prem, Kiesha
    • 18 July 2023
  • Assessing the impact of the 2018 Changchun Changsheng vaccine incident on childhood vaccination in China. (2023) Hou, Zhiyuan; Lai, Xiaozhen; Liu, Yang; Jit, Mark; Larson, Heidi; Hai, Fang
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  • drwariri/Mapping-the-timeliness-of-routine-childhood-vaccination-in-The-Gambia-a-spatial-modelling-study. (2023) Wariri, Oghenebrume
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  • BronnerG/Hosp_Vacc_analysis: v1. (2023) Gonçalves, Bronner P.
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  • Differential effects of antiretroviral treatment on immunity and gut microbiome composition in people living with HIV in rural versus urban Zimbabwe. (2023) Burkhart Colorado, Angela Sofia; Lazzaro, Alessandro; Preston, Charles; Nusbacher, Nichole; Boyd, Kathryn; Fiorillo, Suzanne; Martin, Casey; Siebert, Janet; Campbell, Thomas
    • September 2023
  • Rapid Assessment of Avoidable Blindness Study Protocol Template. (2023) International Centre for Eye Health description
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  • typhoidgenomics/TyphiNET. (2023) Cerdeira, Louise; Dyson, Zoe Anne; Holt, Kathryn E.
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  • Additional file 3 of Assessing the impact of the “malaria supporters project” intervention to malaria control in the Brazilian Amazon: an interrupted time-series analysis. (2023) Garcia, Klauss Kleydmann Sabino; Soremekun, Seyi; Bottomley, Christian; Abrahão, Amanda Amaral; de Miranda, Cristiano Barreto; Drakeley, Chris; Ramalho, Walter Massa; Siqueira, André M
    • 21 September 2023
  • aj-clements/Vivli-AMR-KG. (2023) Knight, Gwenan M; Waterlow, Naomi; Wildfire, Jacob; Clements, Alastair J
    • 25 September 2023
  • Free School Meals Natural Experiment. (2023) Petersen, Jakob; Dezateux, Carol
    • 27 September 2023
  • NaomiWaterlow/markov_model: V1.0.0. (2023) Waterlow, Naomi
  • qleclerc/phage_antibiotic_dynamics. (2023) Leclerc, Quentin J.
    • 28 September 2023
  • linfeng-wang/GMM4TB. (2023) Wang, Linfeng
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  • epiverse-trace/epiparameter. (2023) Lambert, Joshua; Gruson, Hugo; Kucharski, Adam J.; Gupte, Pratik; Salmon, Maëlle; Campos, Andree Valle; Monticone, Pietro
    • 4 October 2023
  • WorldHealthOrganization/mca-pretermbirths-analysis. (2023) Bradley, Ellen; Lopez, Gerard
    • 5 October 2023
  • cmmid/covidm_reports: HEA Snapshot. (2023) Pearson, Carl A. B.; Thompson, Sam; Van Zandvoort, Kevin; Eggo, Rosalind M.; Jarvis, Christopher I.
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  • opensafely/Paxlovid-and-sotrovimab. (2023) Zheng, Bang; lshbz1
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  • VN Types Bayesian Modelling. (2023) Bradley, Ellen
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  • tjhladish/AbcSmc. (2023) Pearson, Carl A. B.; Hladish, Thomas
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  • DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction. (2023) Etienne, Rampal S.; Valente, Luis; Phillimore, Albert B.; Haegeman, Bart; Lambert, Joshua W.; Santos Neves, Pedro; Xie, Shu; Bilderbeek, Richèl J.C.; Hildenbrandt, Hanno; Hauffe, Torsten; Laudanno, Giovanni; Kristensen, Nadiah; Scherrer, Raphael
    • 23 October 2023
  • rsetienne/DAISIE. (2023) Neves, Pedro Santos; Lambert, Joshua W.; Etienne, Rampal S.; Bilderbeek, Richel; Xie, Shu; Valente, Luis; Hildenbrandt, H; Scherrer, Raphaël; Yangshen0325
    • 31 October 2023
  • Annexes to: A Systematic Review to Identify the Effectiveness of Greenhouse Gas Mitigation Interventions for Healthcare Systems in Low- and Middle-Income Countries. (2023) Blom, Iris description
  • SungmokJung/mpox_global: Initial release. (2023) Jung, Sung-mok; Miura, Fuminari; Endo, Akira; Murayama, Hiroaki
    • 6 November 2023
  • PANGEA-HIV/PANGEA-Sequences: v1.0.0. (2023) PANGEA-HIV Consortium
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  • grahams99/Health-seeking-behaviour. (2023) Graham, Sophie
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  • RNA Sequence data analysis using DESeq2 pipeline. (2023) Namulondo, Joyce; Nyangiri, Oscar Asanya; Kimuda, Magambo Phillip; Nambala, Peter; Nassuuna, Jacent; Egesa, Moses; Nerima, Barbara; Biryomumaisho, Savino; Mugasa, Claire Mack; Nabukenya, Immaculate; Kato, Drago; Elliott, Alison; Noyes, Harry; Tweyongyere, Robert; Matovu, Enock; Mulindwa, Julius
    • 20 November 2023
  • rorygibb/dengue_vietnam_ms: v1.0.0: Code base for Nature Communications MS. (2023) Gibb, Rory
    • 24 November 2023
  • epiverse-trace/vaccineff: vaccineff 0.0.1. (2023) Quevedo, David Santiago; Gupte, Pratik; Gomez, Geraldine; Gruson, Hugo; Hartgerink, Chris; tracelac; Cucunubá, Zulma M.
    • 28 November 2023
  • epiforecasts/ringbp. (2023) Abbott, Sam; Hellewell, Joel; Lucas, Tim; Funk, Sebastian; Gimma, Amy
    • 29 November 2023
  • thimotei/legacy_ct_modelling: Final version. (2023) Abbott, Sam; Russell, Timothy W.; Hellewell, Joel; Kucharski, Adam J.
  • timriffe/covid_age. (2023) Riffe, Tim; Acosta, Enrique; Kamal, Manal; Donzowa, Jessica; mskniffka; Dudel, Christian; Cimentada, Jorge; Alburez, Diego; aishwaryamuralikrishnan; Aburto, José Manuel; Pascariu, Marius D.; Del Fava, Emanuele; Ribeiro, Filipe
    • 1 December 2023
  • Improving modelling for epidemic responses: reflections. (2023) Sherratt, Katharine; Abbott, Sam; Carnegie, Anna; Liu, Yang
    • 4 December 2023
  • DidDrog11/data_for_gbif: Final version for Gigabyte. (2023) Simons, David
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  • tjhladish/dengue-abm. (2023) Pearson, Carl A. B.; Hladish, Thomas; Pillai, Alexander N.; Chao, Dennis
    • 11 December 2023
  • epidemery/subclinical_transmission. (2023) Emery, Jon C; Dodd, Peter J; Banu, Sayera; Frascella, Beatrice; Garden, Frances L; Horton, Katherine C; Hossain, Shahed; Law, Irwin; van Leth, Frank; Marks, Guy B; Nguyen, Hoa Binh; Nguyen, Hai Viet; Onozaki, Ikushi; Quelapio, Maria Imelda D; Richards, Alexandra S; Shaikh, Nabila; Tiemersma, Edine W; White, Richard G; Zaman, Khalequ; Cobelens, Frank; Houben, Rein MGJ
    • 12 December 2023
  • Whole-Genome Sequencing of Chlamydia trachomatis Strains B/HAR36 and B/Tunis864. (2023) London School of Hygiene & Tropical Medicine
    • 18 December 2023
  • 0xr0bert/ubereats-scraper. (2023) Greener, Robert
    • 2024
  • Health facility assessment of small and sick newborn care in low- and middle-income countries: systematic tool development and operationalisation with NEST360 and UNICEF. (2024) Penzias, Rebecca E.; Bohne, Christine; Ngwala, Samuel K.; Zimba, Evelyn; Lufesi, Norman; Rashid, Ekran; Gicheha, Edith; Odedere, Opeyemi; Dosunmu, Olabisi; Tillya, Robert; Shabani, Josephine; Cross, James H.; Liaghati-Mobarhan, Sara; Chiume, Msandeni; Banda, George; Chalira, Alfred; Wainaina, John; Gathara, David; Irimu, Grace; Adudans, Steve; James, Femi; Tongo, Olukemi; Ezeaka, Veronica Chinyere; Msemo, Georgina; Salim, Nahya; Day, Louise T.; Powell-Jackson, Timothy; Chandna, Jaya; Majamanda, Maureen; Molyneux, Elizabeth M.; Oden, Maria; Richards-Kortum, Rebecca; Ohuma, Eric O.; Paton, Chris; Hailegabriel, Tedbabe; Gupta, Gagan; Lawn, Joy E.
    • 2 January 2024
  • williameoswald/surveydesignr. (2024) Oswald, William
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  • Data for: "Differentiated HIV care cascade for youth in Zimbabwe". (2024) Simms, Victoria; Dziva Chikwari, Chido; Ferrand, Rashida; Bandason, Tsitsi description
    • 9 January 2024
  • MatthewHiggins2017/PanPlasmodiumRPALFManuscript. (2024) Higgins, Matthew
  • epiverse-trace/simulist. (2024) Lambert, Joshua; Gruson, Hugo; Kucharski, Adam J.; Tamayo Cuartero, Carmen
    • 17 January 2024
  • emmahodcroft/ncov_2021: Release for Geneva Manuscript. (2024) Hodcroft, Emma; Zuber, Moira; Harkins, Elias; Neher, Richard; Wagner, Cassia; Huddleston, John; Bedford, Trevor; Moncla, Louise H; Hadfield, James; fzhang12; Sibley, Thomas; Saleh, Ahmad; falnaji; Xueying; aniafijarczyk; Nezu, Tomoyuki; Müller, Nicola Felix; Gall, Astrid; Brito, Anderson; Villabona Arenas, Ch. Julian; Bell, Sidney; Kozyreva, Varvara; Eren; Puller, Vadim; Han, Alvin X.; irak; Rimaz, Hossein; Ghafari, Mahan; Sato, Takeshi; Lee, Hanbin
  • johntaz/nhs-opt-outs. (2024) Tazare, John; Henderson, Alasdair
    • 23 January 2024
  • vaccine-impact/hpv_vaccine_equity. (2024) Abbas, Kaja M.; Vaccine Impact
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  • gwenknight/ecdc_data_age_sex. (2024) Waterlow, Naomi; Knight, Gwen
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  • ehr-lshtm/code-sharing: published_article. (2024) Schultze, Anna; Tazare, John
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  • lucy-gf/imd-covid. (2024) Goodfellow, Lucy
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  • opensafely/covid_collateral_imd. (2024) Costello, Ruth; Henderson, Alasdair
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  • Strobe statement for: "Health-related quality of life of adults with cutaneous leishmaniasis at ALERT Hospital, Addis Ababa, Ethiopia". (2024) Lambert, Saba
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  • obrady/CATI_Vietnam. (2024) Brady, Oliver J.
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  • amrnet/amrnet. (2024) Cerdeira, Louise; Sharma, Vandana; Maranga, Mary; Carey, Megan; Dyson, Zoe Anne; Holt, Kathryn E.
    • 27 March 2024
  • Malawi Epidemiology and Intervention Research Unit Non-Communicable Disease Survey data, 2013-2017 - author-written Stata code. (2024) Mclean, Estelle
    • 28 March 2024
  • VAC4EU/CVM: WP4 SCCS sensitivity code for publication/Zenodo. (2024) Messina, Davide; Paoletti, Olga; Belitser, Svetlana; Gini, Rosa M.; Limoncella, Giorgio; Schultze, Anna
  • epiforecasts/multi-model-information: Publication release. (2024) Sherratt, Katharine; Funk, Sebastian
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  • finalsize: Calculate the Final Size of an Epidemic. (2024) Gupte, Pratik; Van Leeuwen, Edwin; Kucharski, Adam; Eggo, Rosalind M.; Gruson, Hugo; Jombart, Thibaut; Valle Campos, Andree; Lambert, Joshua W.
    • 17 April 2024
  • NHLI-Respiratory-Epi/Alcohol_use_disorder_codelist. (2024) Cook, Sarah
    • 19 April 2024
  • ehm-lab/hipmapp: Health Impact Projections Shiny App and Data. (2024) De la cruz Libardi, Arturo
    • 25 April 2024
  • Code for "Mapping the evidence of novel plant-based foods: A systematic review of nutritional, health, and environmental impacts in high-income countries". (2024) Nájera Espinosa, Sarah; Jelmar Sietsma, Anne
  • Supplementary material for "Mapping the evidence of novel plant-based foods: A systematic review of nutritional, health, and environmental impacts in high-income countries". (2024) Nájera Espinosa, Sarah; Hadida, Genevieve; Jelmar Sietsma, Anne; Alae-Carew, Carmelia; Turner, Grace; Green, Rosemary; Picetti, Roberto; Pastorino, Silvia; Scheelbeek, Pauline
    • 30 April 2024
  • epiverse-trace/serofoi. (2024) Domínguez, Nicolás Torres; Gruson, Hugo; Pavlich-Mariscal, Jaime; Gomez, Geraldine; Gámez López, Miguel Enrique; Cucunubá, Zulma M.; tracelac; Hartgerink, Chris; Azam, James; ben18785
    • 9 May 2024
  • ManuelaQuaresma/CSI. (2024) Rubio, Francisco Javier; Quaresma, Manuela; Rachet, Bernard
    • 10 June 2024
  • Data for: "Cluster-randomised trial of digital adherence technology interventions to reduce poor end-of-treatment outcomes and recurrence among adults with drug-sensitive tuberculosis in Ethiopia". (2024) Fielding, Katherine; Tadesse, Amare W. description
    • 11 June 2024
  • numberize: Convert Words to Numbers in Multiple Languages. (2024) Hartgerink, Chris; Lambert, Joshua W.; Mané, Karim; Gruson, Hugo; Ahadzie, Bankole
    • 12 June 2024
  • cfr: Estimate Disease Severity and Case Ascertainment. (2024) Gupte, Pratik R.; Kucharski, Adam J.; Russell, Timothy W.; Lambert, Joshua W.; Gruson, Hugo; Taylor, Tim; Azam, James M.; Degoot, Abdoelnaser M.; Funk, Sebastian
    • 17 June 2024
  • cleanepi: Clean and Standardize Epidemiological Data. (2024) Mané, Karim; Jombart, Thibaut; Bah, Bubacarr; Ahadzie, Bankolé; Mohammed, Nuredin; Degoot, Abdoelnaser M.; Gruson, Hugo; Gupte, Pratik R.; Azam, James M.; Lambert, Joshua W.; Hartgerink, Chris
    • 21 June 2024
  • Source files for 3D printed hamster anaesthesia delivery nosecone. (2024) Langston, Harry; Fortes Francisco, Amanda; Doidge, Ciaran; Roberts, Chrissy H.; Khan, Archie A.; Jayawardhana, Shiromani; Taylor, Martin C.; Kelly, John M.; Lewis, Michael D.
    • 24 June 2024
  • ryotanakamura1/smoking. (2024) Nakamura, Ryota
    • 26 June 2024
  • APHRC-DSE/INSPIRE-Mental-Health-Project_Landscape_Analysis: R Source code. (2024) Momanyi, Reinpeter Ondeyo; Mugotitsa, Bylhah
    • 28 June 2024
  • ciarajudge/EpiFusion. (2024) Judge, Ciara
  • ciarajudge/EpiFusion_PublicationRepo. (2024) Judge, Ciara
    • 8 July 2024
  • theosanderson/hospitalmedicines. (2024) Sanderson, Theodore
    • 9 July 2024
  • alxsrobert/measles_england_sir. (2024) Robert, Alexis; Suffel, Anne Marie
    • 11 July 2024
  • WCSCourses/Polygenic_Risk_Scores: 2024 Africa Iteration. (2024) j-darocha
  • interpretAMR/AMRrules. (2024) Holt, Kathryn E.; Hawkey, Jane
  • supingling/colorectal_cancer. (2024) Ling, Suping
    • 17 July 2024
  • DAISIEmainland. (2024) Lambert, Joshua W.; Bilderbeek, Richèl; Santos Neves, Pedro
    • 18 July 2024
  • gasparrini/UK-HWfcast. (2024) Mistry, Malcolm; Gasparrini, Antonio
  • thimotei/legacy_nAb_kinetics. (2024) Russell, Timothy W.; Kucharski, Adam J.
    • 19 July 2024
  • ParisBap/TTE_ONTARGET. (2024) Baptiste, Paris J.
    • 24 July 2024
  • ghr/wnv_casecrossover. (2024) Moirano, Giovenale; Fletcher, Chloe; Semenza, Jan C.; Lowe, Rachel
    • 26 July 2024
  • bokern/ics_covid. (2024) Bokern, Marleen
    • 4 August 2024
  • fkrauer/RSV-VACC-DE. (2024) Krauer, Fabienne
    • 6 August 2024
  • sophiemoss/anopheles_popgen. (2024) Moss, Sophie
    • 9 August 2024
  • R markdown for: "Estimating Food Consumption, Micronutrient Intake, and the Contribution of Large-Scale Food Fortification to Micronutrient Adequacy in Tanzania". (2024) Goto, Rie folder_zip
    • 13 August 2024
  • Additional file 2 of Unsupervised title and abstract screening for systematic review: a retrospective case-study using topic modelling methodology. (2024) Natukunda, Agnes; Muchene, Leacky K.
  • A comparison of covariate adjustment approaches under model misspecification in individually randomized trials. (2024) Tackney, Mia S.; Morris, Tim; White, Ian; Leyrat, Clemence; Diaz-Ordaz, Karla; Williamson, Elizabeth
    • 19 August 2024
  • Rapid Assessment of Avoidable Blindness Report: Tanzania, Kilimanjaro (2022). (2024) International Centre for Eye Health
    • 26 August 2024
  • SLGiHub/FIEBRE_Adult_severity_scores: FIEBRE Adult Severity Scores. (2024) SLGiHub
    • 4 September 2024
  • klebgenomics/Kleborate: v3.0.0. (2024) Ryan Wick; Holt, Kathryn E.; marlam89; kelwyres; Maranga, Mary; Petit III, Robert A.; da Silva, Anders Goncalves; Deveaud, Eric; Lampa, Samuel; Stanton, Tom
    • 17 September 2024
  • emilycfivian/Intersectionality-in-NSA-interventions-Analytical-code. (2024) Fivian, Emily
    • 23 September 2024
  • EpiNow2: Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters. (2024) Abbott, Sam; Hellewell, Joel; Sherratt, Katharine; Gostic, Katelyn; Hickson, Joe; Badr, Hamada S.; DeWitt, Michael; Azam, James M.; EpiForecasts; Funk, Sebastian
    • 24 September 2024
  • julianmatthewman/Eczema_outcomes_public. (2024) Matthewman, Julian
    • 30 September 2024
  • typhoidgenomics/genotyphi. (2024) Holt, Kathryn E.; Dyson, Zoe Anne; Hawkey, Jane; flashton2003
    • October 2024
  • theosanderson/taxonium. (2024) Sanderson, Theo; Kramer, Alex; Goater, Richard; Hinrichs, Angie; L'YI, Sehi; Roemer, Cornelius; Kwon, Sung; Vargha, Koorous
    • 14 October 2024
  • epichains: Simulating and Analysing Transmission Chain Statistics Using Branching Process Models. (2024) Azam, James M.; Funk, Sebastian; Finger, Flavio; Kamvar, Zhian N.; Gruson, Hugo; Mané, Karim; Gupte, Pratik; Lambert, Joshua W.
  • esnightingale/vl-disaggregation. (2024) Nightingale, Emily
    • 21 October 2024
  • nextstrain/nextclade. (2024) Aksamentov, Ivan; Neher, Richard; Roemer, Cornelius; mt-gitlocalize; Parker, Anna Anya; Lin, Victor; Sibley, Thomas; Negrón, Daniel Antonio; Nextstrain bot; Anderson, John SJ; Snyk bot; Hodcroft, Emma; Actat; Rubinsteyn, Alex; Grüning, Björn; Tegomoh, Bryan; Chen, Chaoran; Bottoms, Christopher; Maguire, Finlay; Huddleston, John; Lee, Jover; Sanderson, Theo; Harkins, Elias
    • 23 October 2024
  • Synthetic datasets for: "Long-term exposure to PM2.5 and mortality: an analysis of the UK Biobank". (2024) Gasparrini, Antonio; Vanoli, Jacopo
    • 24 October 2024
  • LSHTMPathogenSeqLab/malaria-hub. (2024) juuzia; Ngwana-Joseph, Gabrielle
    • 29 October 2024
  • Model for "Estimating the health and macroeconomic burdens of tuberculosis in India, 2021-2040". (2024) Jensen, Henning Tarp folder_zip
    • 4 November 2024
  • rachaelpung/temporal_networks. (2024) Pung, Rachael; Kucharski, Adam J.; Firth, Josh; Russell, Timothy W.; Rogers, Tim; Lee, Vernon
    • 11 November 2024
  • Food Environment Evidence Directory (FEED) Map. (2024) Juel, Rachel; Dasaraju, Aparna; Newbould, Rebecca html
  • PierreMasselot/RiskExtrapolation. (2024) Masselot, Pierre; Gasparrini, Antonio
    • 14 November 2024
  • lshtm-tbmg/tbmod-pub-undernutrition. (2024) Clark, Rebecca
    • 20 November 2024
  • Rapid Assessment of Avoidable Blindness Report: Malaysia, Eastern Zone (2023). (2024) International Centre for Eye Health
    • 28 November 2024
  • epiparameterDB: Database of Epidemiological Parameters. (2024) Lambert, Joshua W.; Kucharski, Adam J.; Tamayo, Carmen
    • 2 December 2024
  • supingling/spc. (2024) Ling, Suping
    • 3 December 2024
  • LuciaSegovia/FAO-fisheries. (2024) Segovia De La Revilla, Lucia; dzvoti; Codd, Tom
    • 9 December 2024
  • nicolacfoster/dcea.ana: ASCENT DCEA. (2024) Foster, Nicola
    • 12 December 2024
  • enilles1/DR-Leptospirosis. (2024) Nilles, Eric J.; Rees, Eleanor
  • joshwlambert/DAISIEprepExtra. (2024) Lambert, Joshua W.
  • wastewater-informed-covid-forecasting. (2024) Johnson, Kaitlyn E.
    • 30 December 2024
  • ecthomson/AFI. (2024) Thomson, Emma C.
    • 3 January 2025
  • Robinah23/Community-Vaccine-Impact-Vulnerability-Index-. (2025) Nalwanga, Robinah
    • 10 January 2025
  • AmpliconTyper. (2025) Spadar, Anton; Mahindroo, Jaspreet; Troman, Catherine; Owusu, Michael; Adu-Sarkodie, Yaw; Abraham, Dilip; Blossom Benny; Govindan, Karthikeyan; Mohan, Venkata Raghava; Dyson, Zoe Anne; Grassly, Nicholas; Holt, Kathryn E.
    • 14 January 2025
  • ciarajudge/EpiFusion: EpiFusionv1.0. (2025) Judge, Ciara
  • opensafely/post-covid-kidney-outcomes. (2025) Mahalingasivam, Viyaasan; Zheng, Bang; lshbz1; Dillingham, Iain
    • 20 January 2025
  • STROBE and SRQR checklist for the study titled "Management of microbial keratitis by private pharmacies in Uganda: a study of knowledge, attitude, and practice". (2025) Arunga, Simon; Ebong, Abel description
    • 29 January 2025
  • gigs: Assess Fetal, Newborn, and Child Growth with International Standards. (2025) Parker, Simon R; Ohuma, Eric O.; Vesel, Linda
    • 31 January 2025
  • 2025 The Gambia FABLE calculator UP30 v1. (2025) Carr, Tony; Addo, Felicity; Palazzo, Amanda
    • 10 February 2025
  • LuciaSegovia/geospatial_analysis. (2025) Segovia De La Revilla, Lucia
    • 12 February 2025
  • ecthomson/Contamination-Filter. (2025) Thomson, Emma C.
  • ecthomson/Contamination-Phylogeny. (2025) Thomson, Emma C.
  • epinowcast/epidist. (2025) Abbott, Sam; Howes, Adam; Park, Sang Woo; Funk, Sebastian; Bayer, Damon; DeWitt, Michael
    • 20 February 2025
  • epiforecasts/eval-by-method. (2025) Sherratt, Katharine; Funk, Sebastian
    • 27 February 2025
  • Code for "Mapping the evidence of novel plant-based foods: A systematic review of nutritional, health, and environmental impacts in high-income countries". (2025) Jelmar Sietsma, Anne; Nájera Espinosa, Sarah
    • 5 March 2025
  • ciarajudge/EpiFusionUtilities. (2025) Judge, Ciara
  • ciarajudge/EpiFusion_Vignettes: F1000 Article Release. (2025) Judge, Ciara
    • 6 March 2025
  • Appendix files for "Randomised controlled trial of topical combination therapy chlorhexidine 0.2% and natamycin 5% versus topical natamycin 5% alone for fungal keratitis in East Africa". (2025) Hoffman, Jeremy picture_as_pdf
    • 11 March 2025
  • epiverse-trace/tutorials-late. (2025) Campos, Andree Valle; Minter, Amanda; Gruson, Hugo; Degoot, Abdoelnaser M.; Gupte, Pratik; Hartgerink, Chris; Azam, James M.
    • 12 March 2025
  • ahyoung-lim/Arbo_riskmaps_public. (2025) Lim, Ahyoung
    • 17 March 2025
  • seroanalytics/serojump. (2025) Hodgson, David
    • 24 March 2025
  • MGDb 01. Scope and General Concepts. (2025) Modell, Bernadette; Malherbe, Helen; Blencowe, Hannah; Mooorthie, Sowmiya; Petrou, Mary; Darlinson, Matthew; Lawn, Joy description
    • 25 March 2025
  • cmmid/comix_mobility. (2025) Prestige, Em
  • simulist: Simulate Disease Outbreak Line List and Contacts Data. (2025) Lambert, Joshua W.; Tamayo, Carmen; Gruson, Hugo; Gupte, Pratik R.; Kucharski, Adam J.; Hartgerink, Chris; Funk, Sebastian
    • 28 March 2025
  • AndriaMousa/SP-resistance-protective-efficacy-code: v1.1. (2025) Mousa, Andria
  • ShayAdams/randomisation_code_rcts. (2025) Soremekun, Seyi
  • ShayAdams/student_metrics_moodlelshtm. (2025) Soremekun, Seyi
    • 31 March 2025
  • Prediction models for Mtb infection among adolescent and adult household contacts in high tuberculosis incidence settings. (2025) Marambire, Edson Tawanda; Calderwood, Claire J.; Larsson, Leyla; Held, Kathrin; Khan, Palwasha Y.; Banze, Denise; Nhamuave, Celina; Minja, Lillian T.; Mfinanga, Alfred; Gupta, Rishi K.; Khosa, Celso; Mutsvangwa, Junior; Heinrich, Norbert; Kranzer, Katharina
    • 1 April 2025
  • tomsumner/Timing_of_vaccination. (2025) Sumner, Tom
    • 8 April 2025
  • A protocol for emulating four published randomised controlled trials using registry data: effects of antibiotics in cystic fibrosis. (2025) Granger, Emily; Allen, Lorna; Charman, Susan; Clarke, Sarah; Davies, Gwyneth; Frost, Freddy; Plowman, Hannah; Tomlinson, Laurie A.; Keogh, Ruth description
    • 9 April 2025
  • toshiakiasakura/polio_environmental_surveillance. (2025) Asakura, Toshiaki R.
    • 10 April 2025
  • thegargiulian/GRDM. (2025) Gargiulo, Maria
    • 11 April 2025
  • Data and R-code to accompany 'Modelling the impact of climate and the environment on the spatiotemporal dynamics of Lyme borreliosis in Germany'. (2025) Lotto Batista, Martín; Carvalho, Bruno; Gibb, Rory; Solaraju-Murali, Balakrishnan; Flasche, Stefan; Castell, Stefanie; Ghozzi, Stéphane; Lowe, Rachel
  • Data and code from "The overlapping global distribution of dengue, chikungunya, Zika and yellow fever". (2025) Lim, Ahyoung; Brady, Oliver J.
    • 14 April 2025
  • lshtm-tbmg/tbmod-pub-funding-impacts. (2025) Clark, Rebecca
    • 15 April 2025
  • Data Analysis Plan for Event (Heatwave and High Air Pollution) and Non-Event (Average Temperature and Moderate/Good Air Quality) Survey. (2025) Bwire, Constance; Hughes, Robert; Milner, James; Yeung, Shunmay; Bonell, Ana; Bonnet, Gabrielle description
    • 25 April 2025
  • klebgenomics/Kaptive. (2025) Wick, Ryan R.; Stanton, Thomas; Wyres, Kelly L; Holt, Kathryn E.
    • 6 May 2025
  • esnightingale/vl-spatial-diagnosis-delay. (2025) Nightingale, Emily
    • 8 May 2025
  • kingaa/pomp. (2025) King, Aaron A; O'Dea, Eamon; Asfaw, Kidus; Wheeler, Jesse; Breto, Carles; Ionides, Edward; Akinshin, Andrey; Voipio, Timo; Funk, Sebastian
    • 16 May 2025
  • francescochecchi/sdn_mortality_2024. (2025) Checchi, Francesco
    • 2 June 2025
  • R Scripts for Analysis of food-group level household and individual dietary data. (2025) Sandalinas, Fanny; Osman, Mohammed; Goto, Rie; Joy, Edward
    • 10 June 2025
  • NikkiR08/VAF_AMR_EconBurden. (2025) Naylor, Nichola R.
    • 11 June 2025
  • NikkiR08/AMR-UCR. (2025) Naylor, Nichola R.
    • 24 June 2025
  • Data and R code to accompany 'Compound and cascading effects of climatic extremes on dengue outbreak risk in the Caribbean: an impact-based modelling framework with long-lag and short-lag interactions'. (2025) Fletcher, Chloe; Moirano, Giovenale; Alcayna, Tilly; Rollock, Leslie; Van Meerbeeck, Cédric J; Mahon, Roche; Trotman, Adrian; Boodram, Laura-Lee; Browne, Tia; Best, Sabu; Lührsen, Daniela; Díaz, Avriel R; Dunbar, Willy; Lippi, Catherine A; Ryan, Sadie J; Colón-González, Felipe J; Stewart-Ibarra, Anna M; Lowe, Rachel
    • 27 June 2025
  • klebgenomics/KlebNNSsero. (2025) Holt, Kathryn E.; Keegan, Shaun
    • 30 June 2025
  • jodyphelan/NTM-Profiler. (2025) Phelan, Jody
  • migariane/eltmle. (2025) Luque-Fernandez, Miguel Angel; Maringe, Camille; Smith, Matthew J.
    • 6 July 2025
  • Contagent. (2025) Greener, Robert Alexander
    • 12 July 2025
  • Eyedeet/measles_vaccination_scenarios. (2025) Suffel, Anne Marie
    • 15 July 2025
  • jodyphelan/pathogen-profiler. (2025) Phelan, Jody; van Heusden, Peter; Meuli, Michael; Cuddihy, Thom
  • superspreading: Understand Individual-Level Variation in Infectious Disease Transmission. (2025) Lambert, Joshua W.; Kucharski, Adam J.; Adam, Dillon C.; Funk, Sebastian; Gupte, Pratik; Gruson, Hugo; Azam, James M.; Hartgerink, Chris
    • 21 July 2025
  • hstrongman/OSA-narc_CPRD_validation. (2025) Strongman, Helen
    • 24 July 2025
  • Baselines_Application_Data. (2025) Stapper, Manuel
    • 11 August 2025
  • epinowcast/baselinenowcast-paper. (2025) Johnson, Kaitlyn E.; Abbott, Sam; Bracher, Johannes
    • 5 September 2025
  • Data Management for MSc Summer Projects. (2025) Knight, Gareth; LSHTM Library, Archive & Open Research Services picture_as_pdf
    • 14 September 2025
  • typhoidgenomics/TyphoidGenomicsConsortiumMykrobe. (2025) Ingle, Danielle J.; Holt, Kathryn E.; Dyson, Zoe Anne
    • 17 September 2025
  • gasparrini/UKB-confounding. (2025) Gasparrini, Antonio; Vanoli, Jacopo
    • 18 September 2025
  • Quantitative bias analysis for mismeasured variables in health research: a review of software tools. (2025) Gerlach-Wood, Codie J. C.; Tilling, Kate; Bartlett, Jonathan W.; Hughes, Rachael A.
    • 22 September 2025
  • cmmid/reconnect_uk_social_contact_survey. (2025) Goodfellow, Lucy; Quilty, Billy J.; Van Zandvoort, Kevin; Edmunds, W. John
    • 3 October 2025
  • hubverse-org/hubEnsemblesManuscript. (2025) Shandross, Li; Howerton, Emily; Krystalli, Anna; Reich, Nicholas G.; Contamin, Lucie; Ray, Evan; Gruson, Hugo; Funk, Sebastian; Hochheiser, Harry; Kamvar, Zhian N.
    • 7 October 2025
  • Code and data for "Bundling Measures for Food Systems Transformation: a global, multimodel assessment". (2025) Sundiang, Marina; Diniz Oliveira, Thais; Mason-D'Croz, Daniel; Gibson, Matthew; Beier, Felicitas Dorothea; Benavidez, Lauren; Bodirsky, Benjamin Leon; Bos, Astrid; Chepeliev, Maksym; Chen, David Meng-Chuen; de Lange, Thijs; Doelman, Jonathan; Dunston, Shahnila; Frank, Stefan; Fujimori, Shinichiro; Hasegawa, Tomoko; Havlik, Petr; Hristov, Jordan; Jägermeyr, Jonas; Kozicka, Marta; Kuiper, Marijke; Kyle, Page; Lotze-Campen, Hermann; Luchtenbelt, Hermen; Mishra, Abhijeet; Müller, Christoph; Nelson, Gerald; Palazzo, Amanda; Perez Dominguez, Ignacio; Popp, Alexander; Sands, Ronald; Springmann, Marco; Stehfest, Elke; Sulser, Timothy; Takahashi, Kiyoshi; Tassinari, Gianmaria; Thom, Ferike; Thornton, Philip; Tsuchiya, Kazuaki; van Zeist, Willem-Jan; van Meijl, Hans; van der Mensbrugghe, Dominique; van Vuuren, Detlef; van Zanten, Hannah; Weindl, Isabelle; Wiebe, Keith; Zhao, Xin; Herrero, Mario
    • 20 October 2025
  • Code for Cascades of effectiveness of next-generation insecticide-treated nets against malaria, from entomological trials to real-life conditions. (2025) Champagne, Clara; Lemant, Jeanne; Assenga, Alphonce; Kibondo, Ummi A.; Lekundayo, Ruth G.; Mbuba, Emmanuel; Moore, Jason; Muganga, Joseph B.; Ntabaliba, Watson S.; Odufuwa, Olukayode G.; Swai, Johnson Kyeba; Alexa, Maria; Goers, Roland; Golumbeanu, Monica; Chitnis, Nakul; Ross, Amanda; N'Guessan, Raphael; Moore, Sarah; Pothin, Emilie
    • 29 October 2025
  • PierreMasselot/Paper--2022--Epidemiology--PM2.5_components. (2025) Masselot, Pierre; Gasparrini, Antonio