Dyson, ZA and Holt, KE. 2021. katholt/genotyphi: GenoTyphi. [Online]. Zenodo. Available from: https://doi.org/10.5281/zenodo.4707613
Dyson, ZA and Holt, KE. katholt/genotyphi: GenoTyphi [Internet]. Zenodo; 2021. Available from: https://doi.org/10.5281/zenodo.4707613
Dyson, ZA and Holt, KE (2021). katholt/genotyphi: GenoTyphi. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4707613
Alternative Title
genotyphi
Description
This script assigns genotypes to Salmonella Typhi genomes and detectes known mutations in the quinolone-resistance determining region (QRDR) of genes gyrA and parC, as well as the acrB-R717Q/L mutations confering resistance to azithromycin.
| Data capture method | Other |
|---|---|
| Date (Date published in a 3rd party system) | 21 April 2021 |
| Language(s) of written materials | English |
| Data Creators | Dyson, ZA and Holt, KE |
|---|---|
| LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Dept of Immunology and Infection |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Date Deposited | 07 Feb 2022 10:05 |
|---|---|
| Last Modified | 15 Dec 2022 16:16 |
| Publisher | Zenodo |
