Data Creators(s) Item Type No Grouping

A

MBIRA - Mortality from Bacterial Infections Resistant to Antibiotics study - underlying data. (2023) Aiken, Alex; Rehman, Andrea M. grid_on

Population-based monitoring of HIV drug resistance early warning indicators in Uganda: A nationally representative survey following revised WHO recommendations: S1 Data. (2020) Asio, Juliet; Watera, Christine; Namuwenge, Norah; Kirungi, Wilford; Musinguzi, Joshua; Mugagga, Kaggwa; Busobozi, Ronald; Tusiime, Bridget Jolly; Lutalo, Tom; Mbidde, Edward Katongole; Kaleebu, Pontiano

B

Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi. (2013) Bronowski, Christina; Fookes, Maria C.; Gilderthorp, Ruth; Ashelford, Kevin E.; Harris, Simon R.; Phiri, Amos; Hall, Neil; Gordon, Melita A.; Wain, John; Hart, Charles A.; Wigley, Paul; Thomson, Nicholas R.; Winstanley, Craig

Data extraction results for a scoping review on AMR in food crops. (2024) Brunn, Ariel; Waage, Jeff description

C

Attitudes and Behaviours to Antimicrobial Prescribing following introduction of a Smartphone App. (2016) Cameron, D William; Panesar, Preet; Jones, Alasdair; Aldous, Alicia; Kranzer, Katharina; Halpin, Eamus; Fifer, Helen; Macrae, Bruce; Curtis, Carmel; Pollara, Gabriele

typhoidgenomics/TyphiNET. (2023) Cerdeira, Louise; Dyson, Zoe Anne; Holt, Kathryn E.

amrnet/amrnet: AMRnet-v1.0. (2024) Cerdeira, Louise; Sharma, Vandana; Maranga, Mary; Carey, Megan; Dyson, Zoe Anne; Holt, Kathryn E.

D

Additional materials from The history, genome and biology of NCTC 30: a non-pandemic Vibrio cholerae isolate from World War One. (2019) Dorman, Matthew J; Kane, Leanne; Domman, Daryl; Turnbull, Jake D; Cormie, Claire; Fazal, Mohammed-Abbas; Goulding, David A; Russell, Julie E; Alexander, Sarah; Thomson, Nicholas R.

Accession numbers and data for S. Typhi sequences used in this study. (2022) Dyson, Zoe Anne; Malau, Elisheba; Horwood, Paul F; Ford, Rebecca; Siba, Valentine; Yoannes, Mition; Pomat, William; Passey, Megan; Judd, Louise M; Ingle, Danielle J; Williamson, Deborah A; Dougan, Gordon; Greenhill, Andrew R; Holt, Kathryn E

Excluded repeat and phage regions in PNG MDUST348 2.1.7.2 completed reference sequence. (2022) Dyson, Zoe Anne; Malau, Elisheba; Horwood, Paul F; Ford, Rebecca; Siba, Valentine; Yoannes, Mition; Pomat, William; Passey, Megan; Judd, Louise M; Ingle, Danielle J; Williamson, Deborah A; Dougan, Gordon; Greenhill, Andrew R; Holt, Kathryn E

Outgroups used for phylogenetic tree rooting. (2022) Dyson, Zoe Anne; Malau, Elisheba; Horwood, Paul F; Ford, Rebecca; Siba, Valentine; Yoannes, Mition; Pomat, William; Passey, Megan; Judd, Louise M; Ingle, Danielle J; Williamson, Deborah A; Dougan, Gordon; Greenhill, Andrew R; Holt, Kathryn E

E

Trescovia/AHHME. (2023) Emes, Eve Tresco; Naylor, Nichola

Comparative fitness analysis of D-cycloserine resistant mutants reveals both fitness-neutral and high-fitness cost genotypes. (2019) Evangelopoulos, Dimitrios; Prosser, Gareth A.; Rodgers, Angela; Dagg, Belinda M.; Khatri, Bhagwati; Ho, Mei Mei; Gutierrez, Maximiliano G.; Cortes, Teresa

G

Profile of the organisms selected for sequencing. (2021) Guevara, Paula Diaz; Maes, Mailis; Thanh, Duy Pham; Duarte, Carolina; Rodriguez, Edna Catering; Montaño, Lucy Angeline; Dan, Thanh Ho Ngoc; Nguyen, To Nguyen Thi; Carey, Megan E; Campos, Josefina; Chinen, Isabel; Perez, Enrique; Baker, Stephen

H

typhoidgenomics/genotyphi. (2024) Holt, Kathryn E.; Dyson, Zoe Anne; Hawkey, Jane; flashton2003

interpretAMR/AMRrules. (2024) Holt, Kathryn E.; Hawkey, Jane

Klebsiella ecology and genome plasticity compared to E. coli and Gram negative ESKAPE pathogens. (2018) Holt, Kathryn E.; Wyres, Kelly

K

vaccine-impact/vaccine_amr. (2023) Kim, Chaelin; Abbas, Kaja M.; vaccine-impact

gwenknight/empiricprescribing. (2019) Knight, Gwen

L

qleclerc/mrsa_phage_dynamics. (2022) Leclerc, Quentin J.

qleclerc/phage_antibiotic_dynamics. (2023) Leclerc, Quentin J.

AR.IA App all datasets. (2019) Leclerc, Quentin J.; Naylor, Nichola R.; Aiken, Alexander M.; Coll, Francesc; Knight, Gwenan M.

AR.IA App drug breakdown. (2019) Leclerc, Quentin J.; Naylor, Nichola R.; Aiken, Alexander M.; Coll, Francesc; Knight, Gwenan M.

AR.IA App drug breakdown (groups). (2019) Leclerc, Quentin J.; Naylor, Nichola R.; Aiken, Alexander M.; Coll, Francesc; Knight, Gwenan M.

AR.IA App economic data. (2019) Leclerc, Quentin J.; Naylor, Nichola R.; Aiken, Alexander M.; Coll, Francesc; Knight, Gwenan M.

AR.IA App species breakdown. (2019) Leclerc, Quentin J.; Naylor, Nichola R.; Aiken, Alexander M.; Coll, Francesc; Knight, Gwenan M.

Campylobacter coli strain, whole genome shotgun sequencing project. (2022) Lehri, Burhan; Navoly, G; Willcocks, Sam; Huong, LQ; Stabler, Richard A

Convergent evolution of artemisinin and chloroquine resistance in Ethiopian Plasmodium falciparum parasites. (2025) Letebo, Alemayehu; Vanheer, Leen N.; Engdaw, Mengst; Alemayehu, Dawit Hailu; Deressa, Jimma Dinsa; Adnew, Bethlehem; Ayele, Abaysew; Keffale, Migbaru; Demisse, Mulugeta; Seyoum, Tamrayehu; Shiferaw, Meklit; Sime, Heven; Gebreegziabxier, Atsbeha; Shimelash, Amanuel; Tafa, Elias B.; Chali, Wakweya; Alemayehu, Lina; Kassa, Fikregabrail Aberra; Zeleke, Ayalew Jejaw; Hamza, Tajudin Abdurhaman; Tamirat, Abel Beliyu; Misganaw, Tadesse; Bogale, Alayu; Abriham, Zufan Yiheyis; Nasir, Yasin; Jebessa, Gutema; Ejigu, Legesse Alamerie; Yohannes, Metmiku; Kebede, Betelhem Akililu; Ayele, Matiwos Kidane; Abdo, Melat; Habtamu, Getinet; Gizat, Addisu; Phelan, Jody; Matlock, Bryce; Fidock, David A.; Campino, Susana; Assefa, Ashenafi; Koepfli, Cristian; Massebo, Fekadu; Tadesse, Fitsum G.

Comparing antimicrobial resistance prediction pipelines from bacterial whole genome sequencing data: An inter-laboratory study. (2019) London School of Hygiene & Tropical Medicine

Data for: "Genomic diversity and antimicrobial resistance in clinical Klebsiella pneumoniae isolates from tertiary hospitals in Southern Ghana". (2023) London School of Hygiene & Tropical Medicine

Model S1 - An Economic Evaluation of Home Management of Malaria in Uganda: An Interactive Markov Model. (2010) Lubell, Yoel; Mills, Anne; Whitty, Christopher J.M.; Staedke, Sarah G. description

M

Assessment of antimalarial drug resistant markers in asymptomatic Plasmodium falciparum infections after 4 years of indoor residual spraying in Northern Ghana. S1 Data. (2020) Myers-Hansen, James L.; Abuaku, Benjamin; Oyebola, Muyiwa K.; Mensah, Benedicta A.; Ahorlu, Collins; Wilson, Michael D.; Awandare, Gordon; Koram, Kwadwo A.; Ngwa, Alfred Amambua; Ghansah, Anita

N

Experimental hut data. (2016) Ngufor, Corine; Critchley, Jessica; Fagbohoun, Josias; N'guessan, Raphael; Todjinou, Damien; Rowland, Mark grid_on

O

Evaluation of the InTray and Compact Dry culture systems for the diagnosis of urinary tract infections - ARGUS study dataset. (2020) Olaru, Ioana Diana html

ARGUS clinical and bacteriological outcomes dataset. (2021) Olaru, Ioana-Diana description

P

Additional file 1 of Impact of azithromycin mass drug administration on the antibiotic-resistant gut microbiome in children: a randomized, controlled trial. (2022) Pickering, Harry; Hart, John D.; Burr, Sarah; Stabler, Richard; Maleta, Ken; Kalua, Khumbo; Bailey, Robin L.; Holland, Martin J.

R

Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016. (2020) Rahman, Sadia Isfat Ara; Dyson, Zoe A.; Klemm, Elizabeth J.; Khanam, Farhana; Holt, Kathryn E.; Chowdhury, Emran Kabir; Dougan, Gordon; Qadri, Firdausi

S

Dataset for "Genomic characterisation of Salmonella enterica serovar Wangata isolates obtained from different sources reveals low genomic diversity". (2020) Simpson, Kelly M J; Mor, Siobhan M; Ward, Michael P; Collins, Julie; Flint, James; Hill-Cawthorne, Grant A; El Ghany, Moataz Abd

AntonS-bio/entropy. (2022) Spadar, Anton

T

S1 Data for: "Is There a Need for Viral Load Testing to Assess Treatment Failure in HIV-Infected Patients Who Are about to Change to Tenofovir-Based First-Line Antiretroviral Therapy? Programmatic Findings from Myanmar". (2016) Thiha, Nay; Chinnakali, Palanivel; Harries, Anthony D.; Shwe, Myint; Balathandan, Thanumalaya Perumal; Thein Than Tun, Sai; Das, Mrinalini; Tin, Htay Htay; Yi, Yi; Babin, François Xavier; Lwin, Thi Thi; Clevenbergh, Philippe Albert

karatsang/rulesbased_logisticregression. (2020) Tsang, Kara K

U

Exploring the oxidative, antimicrobial and genomic properties of Campylobacter jejuni strains isolated from poultry. (2018) Ugarte-Ruiz, Maria; Domínguez, Lucas; Corcionivoschi, Nicolae; Wren, Brendan W.; Dorrell, Nick; Gundogdu, Ozan

V

R code: why sensitive bacteria are resistant to hospital infection control. (2017) van Kleef, Esther; Luangasanatip, Nantasit; Bonten, Marc JM; Cooper, Ben S

W

gwenknight/ecdc_data_age_sex. (2024) Waterlow, Naomi; Knight, Gwen