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Number of items: 115.

4 June 2007

Vernikos, GS, Thomson, NR and Parkhill, J (2007). Genetic flux over time in the Salmonella lineage. [Data Collection]. Genome Biology.

27 July 2008

Holt, KE, Parkhill, J, Mazzoni, CJ, Roumagnac, P, Weill, F, Goodhead, I, Rance, R, Baker, S, Maskell, DJ, Wain, J, Dolecek, C, Achtman, M and Dougan, G (2008). High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. [Data Collection]. Nature Genetics.

3 September 2010

Natividad, A, Freeman, TC, Jeffries, D, Burton, MJ, Mabey, DCW, Bailey, RL and Holland, MJ (2010). Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. [Data Collection]. NCBI Gene Expression Omnibus.

12 October 2010

Bowyer, P, Simon, GM, Cravatt, BF and Bogyo, M (2010). Global Profiling of Proteolysis during Rupture of Plasmodium falciparum from the Host Erythrocyte. [Data Collection]. Molecular & Cellular Proteomics.

10 June 2011

Holland, MJ, Natividad, A, Mabey, D, Jeffries, D, Burton, MJ and Bailey, RL (2011). Expression data from Gambian children with and without the clinical signs of active trachoma: HG-focus array. [Data Collection]. ArrayExpress.

Holland, MJ, Natividad, A, Mabey, DC, Jeffries, D, Burton, MJ, Bailey, RL and Freeman, TC (2011). Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. [Data Collection]. ArrayExpress.

13 June 2011

Lorenz, L and Koella, JC (2011). Data from: The microsporidian parasite Vavraia culicis as a potential late life-acting control agent of malaria. [Data Collection]. Dryad digital repository.

1 August 2011

Burton, MJ, Hu, V, Bauer, J, Mabey, D, Holland, MJ and Bailey, RL (2011). The conjunctival transcriptome in scarring trachoma for Tanzanians. [Data Collection]. NCBI Gene Expression Omnibus.

3 November 2011

Arnvig, KB, Comas, I, Thomson, NR, Houghton, J, Boshoff, HI, Croucher, NJ, Rose, G, Perkins, TT, Parkhill, J, Dougan, G and Young, DB (2011). Sequence-Based Analysis Uncovers an Abundance of Non-Coding RNA in the Total Transcriptome of Mycobacterium tuberculosis. [Data Collection]. Figshare.

24 November 2011

Smith, R (2011). An experimental investigation of social preferences, their determinants and their role in the labour supply function. [Data Collection]. UK Data Service, Essex, United Kingdom.


Okumu, F (2012). Combining insecticide treated bed nets and indoor residual spraying for malaria vector control in Africa. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

20 August 2012

Cliff, J, Lee, J, Constantinou, N, Cho, J, Clark, TG, Ronacher, K, King, EC, Lukey, PT, Duncan, K, Van Helden, PD, Walzl, G and Dockrell, HM (2012). Tuberculosis Patients Blood Gene Expression Through Treatment. [Data Collection]. ArrayExpress.

Cliff, J, Lee, J, Constantinou, N, Cho, J, Clark, TG, Ronacher, K, King, EC, Lukey, PT, Duncan, K, Van Helden, PD, Walzl, G and Dockrell, HM (2012). Tuberculosis Patients Blood Gene Expression Through Treatment (cured and end-of-treatment patients). [Data Collection]. ArrayExpress.

4 January 2013

Athrey, G, Hodges, TK, Reddy, MR, Overgaard, H, Matias, A, Ridl, FC, Kleinschmidt, I, Caccone, A and Slotman, MA (2013). Data from: Effective population size of malaria mosquitoes: large impact of vector control. [Data Collection]. Dryad digital repository.

11 June 2013

Derrick, T, Roberts, Ch, Rajasekhar, M, Burr, SE, Joof, H, Makalo, P, Bailey, RL, Mabey, DCW, Burton, MJ and Holland, MJ (2013). Conjunctival miRNA expression data in scarring and inflammatory trachoma. [Data Collection]. NCBI Gene Expression Omnibus.

14 November 2013

Bronowski, C, Fookes, MC, Gilderthorp, R, Ashelford, KE, Harris, SR, Phiri, A, Hall, N, Gordon, MA, Wain, J, Hart, CA, Wigley, P, Thomson, NR and Winstanley, C (2013). Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi. [Data Collection]. PLOS Neglected Tropical Diseases.


Coll, F, Mcnerney, R, Guerra-Assunção, JA, Glynn, JR, Perdigão, J, Viveiros, M, Portugal, I, Pain, A, Martin, N and Clark, TG (2014). Data for: "A robust SNP barcode for typing Mycobacterium tuberculosis complex strains". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Geary, TG, Ingram-Sieber, K, Cowan, N, Panic, G, Vargas, M, Mansour, N, Bickle, Q, Wells, TNC, Spangenberg, T and Keiser, J (2014). Orally Active Antischistosomal Early Leads Identified from the Open Access Malaria Box. [Data Collection]. Figshare.

23 January 2014

Jombart, T, Cori, A, Didelot, X, Cauchemez, S, Fraser, C and Ferguson, N (2014). Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. [Data Collection]. PLOS Computational Biology.

13 May 2014

Forbes, H, Bhaskaran, K, Thomas, SL, Smeeth, L, Clayton, T and Langan, S (2014). Therapy code list - Other immunosuppressive therapies codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

3 June 2014

Giraud, E, Rogers, M, Bates, P and Dillon, R (2014). Transcript abundance comparison between BALB/c ears inoculated with Leishmania mexicana and Leishmania mexicana plus promastigote secretory gel (PSG). [Data Collection]. ArrayExpress.

Joshua, G (2014). Transcription profiling by array of Caenorhabditis elegans with biofilm compared to without biofilm. [Data Collection]. ArrayExpress.

Pumirat, P, Cuccui, J, Stabler, R, Stevens, JM, Muangsombut, V, Singsuksawat, E, Stevens, MP, Wren, B and Korbsrisate, S (2014). Transcription profiling of Burkholderia pseudomallei under salt stress and the effect on a type III secretion system. [Data Collection]. ArrayExpress.

Zelmer, A, Martin, M, Gundogdu, O, Birchenough, G, Lever, R, Wren, B, Luzio, JP and Taylor, PW (2014). Transcription profiling of brain, liver and spleen from rats infected with Escherichia coli K1 and treated with capsule-selective endosialidase E. [Data Collection]. ArrayExpress.

30 June 2014

Fletcher, HA, Filali-Mouhim, A, Nemes, E, Hawkridge, A, Keyser, A, Njikan, S, Hatherill, M, Scriba, TJ, Abel, B, Kagina, BM, Veldsman, A, Agudelo, NM, Kaplan, G, Hussey, GD, Sekaly, R and Hanekom, WA (2014). PBMC expression profiles of BCG vaccine protected infants and of BCG vaccinated infants who develop tuberculosis disease. [Data Collection]. NCBI Gene Expression Omnibus.

12 November 2014

Chidambaram, JD, Bauer, J, Holland, M, Burton, M, Prajna, NV, Srikanthi, P, Lalitha, P, Elakkiya, S and Lanjewar, S (2014). Transcriptome data for bacterial and fungal keratitis compared to cadaver cornea. [Data Collection]. ArrayExpress.

Chidambaram, JD, Bauer, J, Holland, M, Burton, M, Prajna, NV, Srikanthi, P, Lalitha, P, Elakkiya, S and Lanjewar, S (2014). Transcriptome data for bacterial and fungal keratitis compared to cadaver cornea. [Data Collection]. ArrayExpress, London, United Kingdom.


Phelan, J, Maitra, A, Mcnerney, R, Nair, M, Gupta, A, Coll, F, Pain, A, Bhakta, S and Clark, TG (2015). Data for: "The draft genome of Mycobacterium aurum, a potential model organism for investigating drugs against Mycobacterium tuberculosis and Mycobacterium leprae". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

22 March 2015

Fernández-Grandon, GM, Gezan, SA, Armour, JAL, Pickett, JA and Logan, J (2015). Heritability of Attractiveness to Mosquitoes. [Data Collection]. PLOS One.

18 April 2015

Hernandez-Vargas, H and Silver, M (2015). DNA methylome analysis in infants from The Gambia / Aflatoxin / Seasonality study. [Data Collection]. NCBI Gene Expression Omnibus.

4 June 2015

Lazzarino, A, Hamer, M, Carvalho, L, Gaze, D, Collinson, P and Steptoe, A (2015). The mediation of coronary calcification in the association between risk scores and cardiac troponin T elevation in healthy adults: Is atherosclerosis a good prognostic precursor of coronary disease? [Data Collection]. Preventive Medicine.

August 2015

Silver, M, Corbin, KD, Hellenthal, G, da Costa, K, Dominguez-salas, P, Moore, S, Owen, J, Prentice, A, Hennig, B and Zeisel, SH (2015). Evidence for negative selection of gene variants that increase dependence on dietary choline in a Gambian cohort: Supplemental Data. [Data Collection]. The FASEB Journal.

12 August 2015

De Maio, N, Wu, C, O'Reilly, KM and Wilson, D (2015). New Routes to Phylogeography: A Bayesian Structured Coalescent Approximation. [Data Collection]. Figshare.

21 August 2015

Seward, N, Prost, A, Copas, A, Corbin, M, Li, L, Colbourn, T, Osrin, D, Neuman, M, Azad, K, Kuddus, A, Nair, N, Tripathy, P, Manandhar, D, Costello, A and Cortina-Borja, M (2015). Using Observational Data to Estimate the Effect of Hand Washing and Clean Delivery Kit Use by Birth Attendants on Maternal Deaths after Home Deliveries in Rural Bangladesh, India and Nepal. [Data Collection]. Figshare.

11 September 2015

Cliff, J, Cho, J, Lee, J, Ronacher, K, King, E, van Helden, P, Walzl, G and Dockrell, H (2015). Comparison of M. tuberculosis and M. bovis BCG in diluted whole blood cultures. [Data Collection]. ArrayExpress.

Cliff, J, Cho, J, Lee, J, Ronacher, K, King, E, van Helden, P, Walzl, G and Dockrell, H (2015). Excessive Cytolytic Responses Predict Tuberculosis Relapse After Apparently Successful Treatment. [Data Collection]. ArrayExpress.

23 September 2015

Ugarte-Ruiz, M, Stabler, R, Domínguez, L, Domínguez, L, Wren, B, Dorrell, N and Gundogdu, O (2015). Prevalence of Type VI Secretion System in Spanish Campylobacter jejuni Isolates. [Data Collection]. National Center for Biotechnology Information.

October 2015

Zoltner, M, Leung, KF, Alsford, S, Horn, D and Field, MC (2015). Modulation of the Surface Proteome through Multiple Ubiquitylation Pathways in African Trypanosomes: Supporting Information. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

1 October 2015

Pakpoor, J, Disanto, G, Altmann, D, Pavitt, S, Turner, BP, Marta, M, Juliusson, G, Baker, D, Chataway, J and Schmierer, K (2015). No evidence for higher risk of cancer in patients with multiple sclerosis taking cladribine: Data supplement. [Data Collection]. Neurology: Neuroimmunology & Neuroinflammation.

4 November 2015

Phelan, J, Coll, F, Mcnerney, R, Ascher, DB, Pires, DEV, Furnham, N, Coeck, N, Hill-Cawthorne, GA, Nair, MB, Mallard, K, Ramsay, A, Campino, S, Hibberd, M, Pain, A, Rigouts, L and Clark, T (2015). Whole genome sequences for M.tuberculosis isolates from the TDR strain bank. [Data Collection]. European Nucleotide Archive.

8 January 2016

Nambron, R, Silajdžić, E, Kalliolia, E, Ottolenghi, C, Hindmarsh, P, Hill, NR, Costelloe, SJ, Martin, NG, Positano, V, Watt, HC, Frost, C, Björkqvist, M and Warner, TT (2016). A Metabolic Study of Huntington’s Disease. [Data Collection]. PLOS One.

20 January 2016

Arjyal, A, Basnyat, B, Nhan, HT, Koirala, S, Giri, A, Joshi, N, Shakya, M, Pathak, KR, Mahat, SP, Prajapati, SP, Adhikari, N, Thapa, R, Merson, L, Gajurel, D, Lamsal, K, Lamsal, D, Yadav, BK, Shah, G, Shrestha, P, Dongol, S, Karkey, A, Thompson, C, Thieu, NTV, Thanh, DP, Baker, S, Thwaites, GE, Wolbers, M and Dolecek, C (2016). Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial. [Data Collection]. The Lancet Infectious Diseases.

February 2016

Phelan, JE, Coll, F, Bergval, I, Anthony, RM, Warren, R, Sampson, SL, Gey van Pittius, NC, Glynn, JR, Crampin, AC, Alves, A, Bessa, TB, Campino, S, Dheda, K, Grandjean, L, Hasan, R, Hasan, Z, Miranda, A, Moore, D, Panaiotov, S, Perdigao, J, Portugal, I, Sheen, P, de Oliveira Sousa, E, Streicher, EM, van Helden, PD, Viveiros, M, Hibberd, ML, Pain, A, Mcnerney, R and Clark, TG (2016). Data for: "Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

4 February 2016

Derrick, T, Last, AR, Burr, SE, Roberts, Ch, Nabicassa, M, Cassama, E, Bailey, RL, Mabey, DCW, Burton, MJ and Holland, MJ (2016). Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection. [Data Collection]. NCBI Gene Expression Omnibus.

9 February 2016

Wang, X, Zheng, D, Arima, H, Sato, S, Gasparrini, A, Heeley, E, Delcourt, C, Lo, S, Huang, Y, Wang, J, Stapf, C, Robinson, T, Lavados, P, Chalmers, J and Anderson, CS (2016). Low Ambient Temperature and Intracerebral Hemorrhage: The INTERACT2 Study. [Data Collection]. PLoS One.

12 February 2016

Duchêne, S, Holt, KE, Weill, F, Le Hello, S, Hawkey, J, Edwards, DJ, Fourment, M and Holmes, EC (2016). Bacteria genomic rates data: First release. [Data Collection]. Zenodo.

18 February 2016

Tusting, LS, Rek, J, Arinaitwe, E, Staedke, SG, Kamya, MR, Cano, J, Bottomley, C, Johnston, D, Dorsey, G, Lindsay, SW and Lines, J (2016). Additional file 4: of Why is malaria associated with poverty? Findings from a cohort study in rural Uganda. [Data Collection]. Figshare.

2 March 2016

Carpenter, DO, Svefors, P, Rahman, A, Ekström, E, Khan, AI, Lindström, E, Persson, LÅ and Ekholm Selling, K (2016). Stunted at 10 Years. Linear Growth Trajectories and Stunting from Birth to Pre-Adolescence in a Rural Bangladeshi Cohort. [Data Collection]. Figshare.

29 April 2016

Mansour, NR, Paveley, R, Gardner, JMF, Bell, AS, Parkinson, T and Bickle, Q (2016). High Throughput Screening Identifies Novel Lead Compounds with Activity against Larval, Juvenile and Adult Schistosoma mansoni. [Data Collection]. Figshare.

6 May 2016

Ochola-Oyier, LI, Okombo, J, Wagatua, N, Ochieng, J, Tetteh, KK, Fegan, G, Bejon, P and Marsh, K (2016). Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population. [Data Collection]. Malaria Journal.

9 June 2016

McLachlan, S, Giambartolomei, C, White, J, Charoen, P, Wong, A, Finan, C, Engmann, J, Shah, T, Hersch, M, Podmore, C, Cavadino, A, Jefferis, BJ, Dale, CE, Hypponen, E, Morris, RW, Casas, JP, Kumari, M, Ben-Shlomo, Y, Gaunt, TR, Drenos, F, Langenberg, C, Kuh, D, Kivimaki, M, Rueedi, R, Waeber, G, Hingorani, AD, Price, JF and Walker, AP (2016). Replication and Characterization of Association between ABO SNPs and Red Blood Cell Traits by Meta-Analysis in Europeans. [Data Collection]. PLOS One.

26 July 2016

Li, M, Taylor, EG, Atkins, KE, Chapman, GB and Galvani, AP (2016). Stimulating Influenza Vaccination via Prosocial Motives. [Data Collection]. PLoS One.

28 July 2016

Van Voorhis, WC, Adams, JH, Adelfio, R, Ahyong, V, Akabas, MH, Alano, P, Alday, A, Alemán Resto, Y, Alsibaee, A, Alzualde, A, Andrews, KT, Avery, SV, Avery, VM, Ayong, L, Baker, M, Baker, S, Ben Mamoun, C, Bhatia, S, Bickle, Q, Bounaadja, L, Bowling, T, Bosch, J, Boucher, LE, Boyom, FF, Brea, J, Brennan, M, Burton, A, Caffrey, CR, Camarda, G, Carrasquilla, M, Carter, D, Belen Cassera, M, Chih-Chien Cheng, K, Chindaudomsate, W, Chubb, A, Colon, BL, Colón-López, DD, Corbett, Y, Crowther, GJ, Cowan, N, D’Alessandro, S, Le Dang, N, Delves, M, DeRisi, JL, Du, AY, Duffy, S, Abd El-Salam El-Sayed, S, Ferdig, MT, Fernández Robledo, JA, Fidock, DA, Florent, I, Fokou, PVT, Galstian, A, Gamo, FJ, Gokool, S, Gold, B, Golub, T, Goldgof, GM, Guha, R, Guiguemde, WA, Gural, N, Guy, RK, Hansen, MAE, Hanson, KK, Hemphill, A, Hooft van Huijsduijnen, R, Horii, T, Horrocks, P, Hughes, TB, Huston, C, Igarashi, I, Ingram-Sieber, K, Itoe, MA, Jadhav, A, Naranuntarat Jensen, A, Jensen, LT, Jiang, RHY, Kaiser, A, Keiser, J, Ketas, T, Kicka, S, Kim, S, Kirk, K, Kumar, VP, Kyle, DE, Lafuente, MJ, Landfear, S, Lee, N, Lee, S, Lehane, AM, Li, F, Little, D, Liu, L, Llinás, M, Loza, MI, Lubar, A, Lucantoni, L, Lucet, I, Maes, L, Mancama, D, Mansour, NR, March, S, McGowan, S, Medina Vera, I, Meister, S, Mercer, L, Mestres, J, Mfopa, AN, Misra, RN, Moon, S, Moore, JP, Morais Rodrigues da Costa, F, Müller, J, Muriana, A, Nakazawa Hewitt, S, Nare, B, Nathan, C, Narraidoo, N, Nawaratna, S, Ojo, KK, Ortiz, D, Panic, G, Papadatos, G, Parapini, S, Patra, K, Pham, N, Prats, S, Plouffe, DM, Poulsen, S, Pradhan, A, Quevedo, C, Quinn, RJ, Rice, CA, Abdo Rizk, M, Ruecker, A, St. Onge, R, Salgado Ferreira, R, Samra, J, Robinett, NG, Schlecht, U, Schmitt, M, Silva Villela, F, Silvestrini, F, Sinden, R, Smith, DA, Soldati, T, Spitzmüller, A, Stamm, SM, Sullivan, DJ, Sullivan, W, Suresh, S, Suzuki, BM, Suzuki, Y, Swamidass, SJ, Taramelli, D, Tchokouaha, LRY, Theron, A, Thomas, D, Tonissen, KF, Townson, S, Tripathi, AK, Trofimov, V, Udenze, KO, Ullah, I, Vallieres, C, Vigil, E, Vinetz, JM, Voong Vinh, P, Vu, H, Watanabe, N, Weatherby, K, White, PM, Wilks, AF, Winzeler, EA, Wojcik, E, Wree, M, Wu, W, Yokoyama, N, Zollo, PHA, Abla, N, Blasco, B, Burrows, J, Laleu, B, Leroy, D, Spangenberg, T, Wells, T and Willis, PA (2016). Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. [Data Collection]. Figshare.

2 August 2016

Warhurst, DC, Craig, JC and Raheem, KS (2016). Influence of LAR and VAR on Para-Aminopyridine Antimalarials Targetting Haematin in Chloroquine-Resistance. [Data Collection]. Figshare.

9 August 2016

Thiha, N, Chinnakali, P, Harries, AD, Shwe, M, Balathandan, TP, Thein Than Tun, S, Das, M, Tin, HH, Yi, Y, Babin, FX, Lwin, TT and Clevenbergh, PA (2016). S1 Data for: "Is There a Need for Viral Load Testing to Assess Treatment Failure in HIV-Infected Patients Who Are about to Change to Tenofovir-Based First-Line Antiretroviral Therapy? Programmatic Findings from Myanmar". [Data Collection]. PLOS One.

7 September 2016

Butcher, RMR, Sokana, O, Jack, K, Macleod, CK, Marks, ME, Kalae, E, Sui, L, Russell, C, Tutill, HJ, Williams, RJ, Breuer, J, Willis, R, Le Mesurier, RT, Mabey, DCW, Solomon, AW and Roberts, Ch (2016). Low Prevalence of Conjunctival Infection with Chlamydia trachomatis in a Treatment-Naïve Trachoma-Endemic Region of the Solomon Islands. [Data Collection]. Figshare.

8 September 2016

Dhalla, K, Cousens, S, Bowman, R, Wood, M and Murdoch, I (2016). Is Beta Radiation Better than 5 Flurouracil as an Adjunct for Trabeculectomy Surgery When Combined with Cataract Surgery? A Randomised Controlled Trial. [Data Collection]. Figshare.

14 September 2016

Williamson, AE, Ylioja, PM, Robertson, MN, Antonova-Koch, Y, Avery, V, Baell, JB, Batchu, H, Batra, S, Burrows, JN, Bhattacharyya, S, Calderon, F, Charman, SA, Clark, J, Crespo, B, Dean, M, Debbert, SL, Delves, M, Dennis, ASM, Deroose, F, Duffy, S, Fletcher, S, Giaever, G, Hallyburton, I, Gamo, F, Gebbia, M, Guy, RK, Hungerford, Z, Kirk, K, Lafuente-Monasterio, MJ, Lee, A, Meister, S, Nislow, C, Overington, JP, Papadatos, G, Patiny, L, Pham, J, Ralph, SA, Ruecker, A, Ryan, E, Southan, C, Srivastava, K, Swain, C, Tarnowski, MJ, Thomson, P, Turner, P, Wallace, IM, Wells, TNC, White, K, White, L, Willis, P, Winzeler, EA, Wittlin, S and Todd, MH (2016). Open Source Drug Discovery: Highly Potent Antimalarial Compounds Derived from the Tres Cantos Arylpyrroles. [Data Collection]. ACS Central Science.

23 September 2016

Salgueiro, P, Lopes, AS, Mendes, C, Charlwood, JD, Arez, AP, Pinto, J and Silveira, H (2016). Molecular evolution and population genetics of a Gram-negative binding protein gene in the malaria vector Anopheles gambiae (sensu lato). [Data Collection]. Parasites & Vectors.

14 October 2016

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Nano LC MS-MS peptide matches from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo.

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Raw data for SELDI-TOF high range from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo.

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Raw data for SELDI-TOF low range from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo.

18 October 2016

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Raw data for RBC, Hb and haematocrit from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo.

2 November 2016

Martinón-Torres, F, Png, E, Khor, CC, Davila, S, Wright, VJ, Sim, KS, Vega, A, Fachal, L, Inwald, D, Nadel, S, Carrol, ED, Martinón-Torres, N, Alonso, SM, Carracedo, A, Morteruel, E, López-Bayón, J, Torre, AC, Monge, CC, de Aguilar, PAG, Torné, EE, Martínez-Padilla, MdC, Martinón-Sánchez, JM, Levin, M, Hibberd, ML and Salas, A (2016). Natural resistance to Meningococcal Disease related to CFH loci: Meta-analysis of genome-wide association studies. [Data Collection]. Scientific Reports.

16 November 2016

Nyiro, JU, Sande, CJ, Mutunga, M, Kiyuka, PK, Munywoki, PK, Scott, JAG and Nokes, DJ (2016). Absence of Association between Cord Specific Antibody Levels and Severe Respiratory Syncytial Virus (RSV) Disease in Early Infants: A Case Control Study from Coastal Kenya. [Data Collection]. Figshare.

21 February 2017

Moradigaravand, D, Martin, V, Peacock, S and Parkhill, J (2017). Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland. [Data Collection]. mBio.

6 March 2017

Murray, L (2017). Data for: "Investigations into the within-host genomic diversity and phenotypic variation of Plasmodium falciparum". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

13 March 2017

Pickering, H, Burr, SE, Derrick, T, Makalo, P, Joof, H, Hayward, RD and Martin J., MJ (2017). Profiling and validation of individual and patterns of Chlamydia trachomatis-specific antibody responses in trachomatous trichiasis. [Data Collection]. Figshare.

28 March 2017

Proaño, A, Bravard, MA, López, JW, Lee, GO, Bui, D, Datta, S, Comina, G, Zimic, M, Coronel, J, Caviedes, L, Cabrera, JL, Salas, A, Ticona, E, Vu, NM, Kirwan, DE, Loader, MI, Friedland, JS, Moore, DAJ, Evans, CA, Tracey, BH and Gilman, RH (2017). Data from: Dynamics of cough frequency in adults undergoing treatment for pulmonary tuberculosis. [Data Collection]. Dryad Digital Repository.

3 May 2017

Abolins, S, King, E, Lazarou, L, Weldon, L, Hughes, L, Drescher, P, Raynes, J, Hafalla, J, Viney, ME and Riley, E (2017). Supplementary Data for: "The comparative immunology of wild and laboratory mice, Mus musculus domesticus". [Data Collection]. Nature Communications.

19 May 2017

Hanron, AE, Billman, ZP, Seilie, AM, Olsen, TM, Fishbaugher, M, Chang, M, Rueckle, T, Andenmatten, N, Greenhouse, B, Arinaitwe, E, Rek, J, Das, S, Domingo, GJ, Shipman, K, Kappe, SH, Kublin, JG and Murphy, SC (2017). Multiplex, DNase-free one-step reverse transcription PCR for Plasmodium 18S rRNA and spliced gametocyte-specific mRNAs. [Data Collection]. Figshare.

25 May 2017

Johnson, A and Mercer, C (2017). National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Secure Access. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom.

12 June 2017

Diallo, K, Gamougam, K, Daugla, DM, Harrison, OB, Bray, JE, Caugant, DA, Lucidarme, J, Trotter, CL, Hassan-King, M, Stuart, JM, Manigart, O, Greenwood, BM and Maiden, MCJ (2017). Hierarchical genomic analysis of carried and invasive serogroup A Neisseria meningitidis during the 2011 epidemic in Chad. [Data Collection]. Figshare.

29 June 2017

Ruis, C, Roy, S, Brown, JR, Allen, DJ, Goldstein, RA and Breuer, J (2017). The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission. [Data Collection]. Figshare.

10 July 2017

Schnapp, LM, Blount, RJ, Daly, KR, Fong, S, Chang, E, Grieco, K, Greene, M, Stone, S, Balmes, J, Miller, RF, Walzer, PD and Huang, L (2017). Effects of clinical and environmental factors on bronchoalveolar antibody responses to Pneumocystis jirovecii: A prospective cohort study of HIV+ patients. [Data Collection]. Figshare.

18 July 2017

Kallonen, T, Brodrick, HJ, Harris, SR, Corander, J, Brown, NM, Martin, V, Peacock, SJ and Parkhill, J (2017). Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

24 July 2017

Sabatini, R, Stortz, JA, Serafim, TD, Alsford, S, Wilkes, J, Fernandez-Cortes, F, Hamilton, G, Briggs, E, Lemgruber, L, Horn, D, Mottram, JC and McCulloch, R (2017). Genome-wide and protein kinase-focused RNAi screens reveal conserved and novel damage response pathways in Trypanosoma brucei. [Data Collection]. Figshare.

26 July 2017

Mcquaid, CF, van den Bosch, F, Szyniszewska, A, Alicai, T, Pariyo, A, Chikoti, PC and Gilligan, CA (2017). Spatial dynamics and control of a crop pathogen with mixed-mode transmission. [Data Collection]. PLOS Computational Biology.

2 August 2017

The, HC, Florez de Sessions, P, Jie, S, Pham Thanh, D, Thompson, CN, Nguyen Ngoc Minh, C, Chu, CW, Tran, T, Thomson, NR, Thwaites, GE, Rabaa, MA, Hibberd, M and Baker, S (2017). Assessing gut microbiota perturbations during the early phase of infectious diarrhea in Vietnamese children. [Data Collection]. Gut microbes.

29 August 2017

Cortes, T, Schubert, OT, Banaei-Esfahani, A, Collins, BC, Aebersold, R and Young, DB (2017). Time course RNA-seq of Mycobacterium tuberculosis exposed to nitric oxide. [Data Collection]. ArrayExpress.

22 September 2017

Diez Benavente, E, Florez de Sessions, P, Moon, RW, Holder, AA, Blackman, MJ, Roper, C, Drakeley, CJ, Pain, A, Sutherland, CJ, Hibberd, ML, Campino, S and Clark, TG (2017). Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations. [Data Collection]. Figshare.

26 September 2017

VanHoek, A (2017). Economic evaluation of HIV-exposure Prophylaxis among men who have sex with men in England: Supplementary material. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

24 October 2017

Masala, G, Lipsitch, M, Bottomley, C and Flasche, S (2017). Supplementary material from "Exploring the role of competition induced by non-vaccine serotypes for herd protection following pneumococcal vaccination". [Data Collection]. Figshare.

26 October 2017

Weill, F, Domman, D, Njamkepo, E, Tarr, C, Rauzier, J, Fawal, N, Keddy, KH, Salje, H, Moore, S, Mukhopadhyay, AK, Bercion, R, Luquero, FJ, Ngandjio, A, Dosso, M, Monakhova, E, Garin, B, Bouchier, C, Pazzani, C, Mutreja, A, Grunow, R, Sidikou, F, Bonte, L, Breurec, S, Damian, M, Njanpop-Lafourcade, B, Sapriel, G, Page, A, Hamze, M, Henkens, M, Chowdhury, G, Mengel, M, Koeck, J, Fournier, J, Dougan, G, Grimont, PAD, Parkhill, J, Holt, KE, Piarroux, R, Ramamurthy, T, Quilici, M and Thomson, NR (2017). Genomic history of the seventh pandemic of cholera in Africa. [Data Collection]. Figshare.

31 October 2017

Marks, M (2017). Data for: Incidental mosquitocidal effect of an ivermectin mass drug administration on Anopheles farauti conducted for scabies control in the Solomon Islands. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

18 November 2017

Messenger, LA, Shililu, J, Irish, SR, Anshebo, GY, Tesfaye, AG, Ye-Ebiyo, Y, Chibsa, S, Dengela, D, Dissanayake, G, Kebede, E, Zemene, E, Asale, A, Yohannes, M, Taffese, HS, George, K, Fornadel, C, Seyoum, A, Wirtz, RA and Yewhalaw, D (2017). MOESM1 of Insecticide resistance in Anopheles arabiensis from Ethiopia (2012-2016): a nationwide study for insecticide resistance monitoring. [Data Collection]. Figshare.

23 November 2017

Saffari, A and Silver, M (2017). DNA methylation in children from The Gambia. [Data Collection]. NCBI Gene Expression Omnibus (GEO).

26 November 2017

Domman, D, Quilici, M, Dorman, MJ, Njamkepo, E, Mutreja, A, Mather, AE, Delgado, G, Morales-Espinosa, R, Grimont, PAD, Lizárraga-Partida, ML, Bouchier, C, Aanensen, DM, Kuri-Morales, P, Tarr, CL, Dougan, G, Parkhill, J, Campos, J, Cravioto, A, Weill, F and Thomson, NR (2017). Integrated view of Vibrio cholerae in the Americas. [Data Collection]. Figshare.

27 December 2017

Wilson, E, Free, C, Morris, TP, Syred, J, Ahamed, I, Menon-Johansson, AS, Palmer, MJ, Barnard, S, Rezel, E and Baraitser, P (2017). S1 Data for "Internet-accessed sexually transmitted infection (e-STI) testing and results service: A randomised, single-blind, controlled trial". [Data Collection]. PLOS Medicine.

18 January 2018

Currier, RB, Cooper, A, Burrell-saward, H, MacLeod, A and Alsford, S (2018). Decoding the network of Trypanosoma brucei proteins that determines sensitivity to apolipoprotein-L1. [Data Collection]. Figshare.

24 January 2018

McCarthy, K, Fielding, K, Churchyard, GJ and Grant, AD (2018). Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. [Data Collection]. Figshare.

9 February 2018

Stone, WJR, Campo, JJ, Ouédraogo, AL, Meerstein-Kessel, L, Morlais, I, Da, D, Cohuet, A, Nsango, S, Sutherland, CJ, van de Vegte-Bolmer, M, Siebelink-Stoter, R, van Gemert, G, Graumans, W, Lanke, K, Shandling, AD, Pablo, JV, Teng, AA, Jones, S, de Jong, RM, Fabra-García, A, Bradley, J, Roeffen, W, Lasonder, E, Gremo, G, Schwarzer, E, Janse, CJ, Singh, SK, Theisen, M, Felgner, P, Marti, M, Drakeley, C, Sauerwein, R, Bousema, T and Jore, MM (2018). Data from: Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. [Data Collection]. Dryad Digital Repository.

1 March 2018

Vasileva, H, Butcher, RMR and Roberts, C (2018). Conjunctival transcriptome profiling of Solomon Islanders with active trachoma but without ocular Chlamydia trachomatis infection. [Data Collection]. NCBI Gene Expression Omnibus.

April 2018

Early, AM, Lievens, M, MacInnis, BL, Ockenhouse, CF, Volkman, SK, Adjei, S, Agbenyega, T, Ansong, D, Gondi, S, Greenwood, B, Hamel, M, Odero, C, Otieno, K, Otieno, W, Owusu-agyei, S, Asante, KP, Sorgho, H, Tina, L, Tinto, H, Valea, I, Wirth, DF and Neafsey, DE (2018). Electronic Supplementary Material for: "Host-mediated selection impacts the diversity of Plasmodium falciparum antigens within infections". [Data Collection]. Nature Communications.

13 April 2018

Abolins, S, Lazarou, L, Weldon, L, Hughes, L, King, EC, Drescher, P, Pocock, MJO, Hafalla, JCR, Riley, EM and Viney, M (2018). The ecology of immune state in a wild mammal, Mus musculus domesticus. [Data Collection]. PLOS Biology.

Abolins, S, Lazarou, L, Weldon, L, Hughes, L, King, EC, Drescher, P, Pocock, MJO, Hafalla, JCR, Riley, EM and Viney, M (2018). The ecology of immune state in a wild mammal, Mus musculus domesticus. [Data Collection]. Figshare.

17 April 2018

Luque-Fernandez, MA, Schomaker, M, Rachet, B and Schnitzer, ME (2018). Targeted maximum likelihood estimation for a binary treatment: A tutorial. [Data Collection]. Github.

2 May 2018

Sepúlveda, N, Phelan, J, Diez-Benavente, E, Campino, S, Clark, TG, Hopkins, H, Sutherland, C, Drakeley, CJ and Beshir, KB (2018). Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. [Data Collection]. Infection, Genetics and Evolution.

3 June 2018

Roberts, CH, Ouburg, S, Preston, MD, de Vries, HJC, Holland, MJ and Morré, SA (2018). Results of pathway enrichment analysis using Database for Annotation, Visualization and Integrated Discovery (DAVID). [Data Collection]. Mediators of Inflammation.

28 June 2018

Horton, KC, Sumner, T, Houben, Rein M G J, Corbett, EL and White, RG (2018). A Bayesian approach to understanding gender differences in tuberculosis disease burden. [Data Collection]. American Journal of Epidemiology.

Amambua-Ngwa, A, Jeffries, D, Amato, R, Worwui, A, Karim, M, Ceesay, S, Nyang, H, Nwakanma, D, Okebe, J, Kwiatkowski, D, Conway, DJ and D’Alessandro, U (2018). Consistent signatures of selection from genomic analysis of pairs of temporal and spatial Plasmodium falciparum populations from The Gambia. [Data Collection]. Scientific Reports.

July 2018

Ugarte-Ruiz, M, Domínguez, L, Corcionivoschi, N, Wren, BW, Dorrell, N and Gundogdu, O (2018). Exploring the oxidative, antimicrobial and genomic properties of Campylobacter jejuni strains isolated from poultry. [Data Collection]. Research in Veterinary Science.

11 July 2018

Kessler, NJ, Waterland, RA, Prentice, AM and Silver, MJ (2018). Establishment of environmentally sensitive DNA methylation states in the very early human embryo - Supplementary Materials. [Data Collection]. Science Advances.

13 July 2018

M. C. Lam, M, Wyres, KL, Duchêne, S, Wick, RR, Judd, LM, Gan, Y, Hoh, C, Archuleta, S, Molton, JS, Kalimuddin, S, Koh, TH, Passet, V, Brisse, S and Holt, KE (2018). Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination. [Data Collection]. Nature Communications.

2 August 2018

Shitaye, G, Gadisa, E, Grignard, L, Shumie, G, Chali, W, Menberu, T, Belachew, M, Tegegn, G, Challi, S, Curry, J, Mahey, L, Hailu, T, Mamo, H, Menon, M, Balcha, T, Aseffa, A, Drakeley, C, Bousema, T and Tadesse, FG (2018). Low and heterogeneous prevalence of glucose-6-phosphate dehydrogenase deficiency in different settings in Ethiopia using phenotyping and genotyping approaches. [Data Collection]. Figshare.

8 August 2018

Higgins, M, Ravenhall, M, Ward, D, Phelan, J, Ibrahim, A, Forrest, MS, Clark, TG, Campino, S and Hancock, J (2018). PrimedRPA: Primer design for Recombinase polymerase amplification assays. [Data Collection]. BioInformatics.

14 August 2018

Sobkowiak, B, Glynn, JR, Houben, Rein M. G. J., Mallard, K, Phelan, JE, Guerra-Assunção, JA, Banda, L, Mzembe, T, Viveiros, M, McNerney, R, Parkhill, J, Crampin, AC and Clark, TG (2018). Additional file 1: of Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. [Data Collection]. Figshare.

4 September 2018

van Meijgaarden, KE, Khatri, B, Smith, SG, Drittij, Anne M. F. H., de Paus, RA, Goeman, JJ, Ho, MM, Dockrell, HM, McShane, H, Joosten, SA and Ottenhoff, THM (2018). Raw data for "Cross-laboratory evaluation of multiplex bead assays including independent common reference standards for immunological monitoring of observational and interventional human studies". [Data Collection]. Figshare.

6 September 2018

Cano, J, Rodríguez, A, Simpson, H, Tabah, EN, Gómez, JF and Pullan, RL (2018). Additional file 2: of Modelling the spatial distribution of aquatic insects (Order Hemiptera) potentially involved in the transmission of Mycobacterium ulcerans in Africa. [Data Collection]. Figshare.

22 October 2018

Giuliani, S, Silva, AC, Borba, Joyce V. V. B., Ramos, PIP, Paveley, RA, Muratov, EN, Andrade, CH and Furnham, N (2018). Computationally-guided drug repurposing enables the discovery of kinase targets and inhibitors as new schistosomicidal agents. [Data Collection]. PLOS Computational Biology.

5 November 2018

de Lencastre, H, Manna, S, Dunne, EM, Ortika, BD, Pell, CL, Kama, M, Russell, FM, Mungun, T, Mulholland, KE, Hinds, J and Satzke, C (2018). Discovery of a Streptococcus pneumoniae serotype 33F capsular polysaccharide locus that lacks wcjE and contains a wcyO pseudogene. [Data Collection]. Figshare.

28 December 2018

Cortes, T and Carvalho, L (2018). Whole genome sequencing of Mycobacterium tuberculosis strains resistant to D-cycloserine. [Data Collection]. ArrayExpress.

1 February 2019

Boinett, CJ, Cain, AK, Hawkey, J, Do Hoang, NT, Khanh, NNT, Thanh, DP, Dordel, J, Campbell, JI, Lan, NPH, Mayho, M, Langridge, GC, Hadfield, J, Chau, NVV, Thwaites, GE, Parkhill, J, Thomson, NR, Holt, KE and Baker, S (2019). Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii. [Data Collection]. Microbial genomics.

19 February 2019

Musicha, P, Msefula, CL, Mather, AE, Chaguza, C, Cain, AK, Peno, C, Kallonen, T, Khonga, M, Denis, B, Gray, KJ, Heyderman, RS, Thomson, NR, Everett, DB and Feasey, NA (2019). Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages. [Data Collection]. Journal of Antimicrobial Chemotherapy.

22 February 2019

Flueck, C, Drought, LG, Jones, A, Patel, A, Perrin, AJ, Walker, EM, Nofal, SD, Snijders, AP, Blackman, MJ and Baker, DA (2019). Phosphodiesterase beta is the master regulator of cAMP signalling during malaria parasite invasion. [Data Collection]. PLOS Biology.

This list was generated on Tue Apr 23 02:11:04 2019 BST.