Browse by Data capture method

Up a level
Export as [feed] Atom [feed] RSS
Group by: Date | Item Type | No Grouping
Number of items: 165.

Hoshi, T, Brugman, V, Sato, S, Ant, T, Tojo, B, Masuda, G, Kaneko, S, Moji, K, Medlock, JM and Logan, J (2019). Field testing of a lightweight, inexpensive, and customisable 3D-printed mosquito light trap in the UK. [Data Collection]. Scientific Reports. https://doi.org/10.1038/s41598-019-47511-y

Beale, MA, Marks, M, Sahi, SK, Tantalo, LC, Nori, AV, French, P, Lukehart, SA, Marra, CM and Thomson, N (2019). Genomic epidemiology of syphilis reveals independent emergence of macrolide resistance across multiple circulating lineages. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-019-11216-7

Camarda, G, Jirawatcharadech, P, Priestley, RS, Saif, A, March, S, Wong, MHL, Leung, S, Miller, AB, Baker, DA, Alano, P, Paine, MJI, Bhatia, SN, O’Neill, PM, Ward, SA and Biagini, GA (2019). Antimalarial activity of primaquine operates via a two-step biochemical relay. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-019-11239-0

Ramadhani, A, Derrick, T, Macleod, D, Massae, P, Malisa, A, Mbuya, K, Mtuy, T, Makupa, W, Roberts, CH, Bailey, RL, Mabey, D, Holland, MJ and Burton, MJ (2019). Ocular immune responses, Chlamydia trachomatis infection and clinical signs of trachoma before and after azithromycin mass drug administration in a treatment naïve trachoma-endemic Tanzanian community. [Data Collection]. PLoS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0007559

Dance, D, Somsavanh, S, Rith, K, Sengdouangphachanh, A, Luangraj, M, Vongsouvath, M, Newton, P, Lubell, Y and Turner, P (2019). The cost-effectiveness of the use of selective media for the diagnosis of melioidosis in different settings. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0007598

Singhania, A, Graham, CM, Gabryšová, L, Moreira-Teixeira, L, Stavropoulos, E, Pitt, JM, Chakravarty, P, Warnatsch, A, Branchett, WJ, Conejero, L, Lin, J, Davidson, S, Wilson, MS, Bancroft, G, Langhorne, J, Frickel, E, Sesay, AK, Priestnall, SL, Herbert, E, Ioannou, M, Wang, Q, Humphreys, IR, Dodd, J, Openshaw, PJ, Mayer-Barber, KD, Jankovic, D, Sher, A, Lloyd, CM, Baldwin, N, Chaussabel, D, Papayannopoulos, V, Wack, A and Banchereau, JF (2019). Transcriptional profiling unveils type I and II interferon networks in blood and tissues across diseases. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-019-10601-6

Bourdon, C, Lelijveld, N, Thompson, D, Dalvi, PS, Gonzales, GB, Wang, D, Misagh, A, Wine, E, Chimwezi, E, Wells, JC, Kerac, M, Bandsma, R and Nyirenda, M (2019). Metabolomics in plasma of Malawian children 7 years after surviving severe acute malnutrition: “ChroSAM” a cohort study. [Data Collection]. EBio Medicine.

Phelan, J, O’Sullivan, DM, Machado, D, Ramos, J, Oppong, YE, Campino, S, O’Grady, J, McNerney, R, Hibberd, ML, Viveiros, M, Huggett, JF and Clark, TG (2019). Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs. [Data Collection]. Genome Medicine. https://doi.org/10.1186/s13073-019-0650-x

Wick, RR, Judd, LM and Holt, KE (2019). Performance of neural network basecalling tools for Oxford Nanopore sequencing. [Data Collection]. Genome Biology. https://doi.org/10.1186/s13059-019-1727-y

Smith, CM, Allen, DJ, Nawaz, S, Kozlakidis, Z, Nastouli, E, Hayward, A and Ward, KN (2019). An interactive data visualisation application to investigate nosocomial transmission of infections. [Data Collection]. Wellcome Open Research. https://doi.org/10.12688/wellcomeopenres.15240.1

Doyle, RM, Rubio, M, Dixon, G, Hartley, J, Klein, N, Coll, P and Harris, KA (2019). Cross-transmission is not the source of new Mycobacterium abscessus infections in a multi-centre cohort of cystic fibrosis patients. [Data Collection]. Clinical Infectious Diseases. https://doi.org/10.1101/582684

Georgiadou, A, Lee, HJ, Walther, M, van Beek, AE, Fitriani, F, Wouters, D, Kuijpers, TW, Nwakanma, D, Dalessandro, U, Riley, E, Otto, TD, Ghani, A, Levin, M, Coin, LJ, Conway, DJ, Bretscher, MT and Cunnington, AJ (2019). Modelling pathogen load dynamics to elucidate mechanistic determinants of host–Plasmodium falciparum interactions. [Data Collection]. Nature Microbiology. https://doi.org/10.1038/s41564-019-0474-x

Minassian, C, Williams, R, Meeraus, WH, Smeeth, L, Campbell, OM and Thomas, S (2019). Methods to generate and validate a Pregnancy Register in the UK Clinical Practice Research Datalink primary care database. [Data Collection]. Pharmacoepidemiology & Drug Safety. https://doi.org/10.1002/pds.4811

O’Connor, D, Png, E, Khor, CC, Snape, MD, Hill, AV, van der Klis, F, Hoggart, C, Levin, M, Hibberd, ML and Pollard, AJ (2019). Common Genetic Variations Associated with the Persistence of Immunity following Childhood Immunization. [Data Collection]. Cell Reports. https://doi.org/10.1016/j.celrep.2019.05.053

Knuepfer, E, Wright, KE, Kumar Prajapati, S, Rawlinson, TA, Mohring, F, Koch, M, Lyth, OR, Howell, SA, Villasis, E, Snijders, AP, Moon, RW, Draper, SJ, Rosanas-urgell, A, Higgins, MK, Baum, J and Holder, AA (2019). Divergent roles for the RH5 complex components, CyRPA and RIPR in human-infective malaria parasites. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1007809

Messina, JP, Brady, OJ, Golding, N, Kraemer, MU, Wint, GRW, Ray, SE, Pigott, DM, Shearer, FM, Johnson, K, Earl, L, Marczak, LB, Shirude, S, Davis Weaver, N, Gilbert, M, Velayudhan, R, Jones, P, Jaenisch, T, Scott, TW, Reiner Jr, RC and Hay, SI (2019). The current and future global distribution and population at risk of dengue. [Data Collection]. Nature Microbiology. https://doi.org/10.1038/s41564-019-0476-8

Chemaitelly, H, Nagelkerke, N, Omori, R and Abu-Raddad, LJ (2019). Characterizing herpes simplex virus type 1 and type 2 seroprevalence declines and epidemiological association in the United States. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0214151

Saralamba, N, Nosten, F, Sutherland, CJ, Paula Arez, A, Snounou, G, White, NJ, Day, NP, Dondorp, AM and Imwong, M (2019). Genetic dissociation of three antigenic genes in Plasmodium ovale curtisi and Plasmodium ovale wallikeri. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0217795

Gunasekara, CJ, Scott, CA, Laritsky, E, Baker, MS, MacKay, H, Duryea, JD, Kessler, NJ, Hellenthal, H, Wood, AC, Hodges, KR, Gandhi, M, Hair, AB, Silver, M, Moore, SE, Prentice, AM, Li, Y, Chen, R, Coarfa, C and Waterland, RA (2019). A genomic atlas of systemic interindividual epigenetic variation in humans. [Data Collection]. Genome Biology. https://doi.org/10.1186/s13059-019-1708-1

Sikazwe, I, Eshun-Wilson, I, Sikombe, K, Czaicki, N, Somwe, P, Mody,, A, Simbeza, S, Glidden, DV, Chizema, E, Mulenga, LB, Padian, N, Duncombe, CJ, Bolton-Moore, C, Beres, LK, Holmes, CB and Geng, E (2019). Retention and viral suppression in a cohort of HIV patients on antiretroviral therapy in Zambia: Regionally representative estimates using a multistage-sampling-based approach. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1002811

Davies, MR, McIntyre, L, Mutreja, A, Lacey, JA, Lees, JA, Towers, RJ, Duchêne, S, Smeesters, PR, Frost, HR, Price, DJ, Holden, MT, Sophia, D, Giffard, PM, Worthing, KA, Seale, AC, Berkley, JA, Harris, SR, Rivera-Hernandez, T, Berking, O, Cork, AJ, Torres, RS, Lithgow, T, Strugnell, RA, Bergmann, R, Nitsche-Schmitz, P, Chhatwal, GS, Bentley, SD, Fraser, JD, Moreland, NJ, Carapetis, JR, Steer, AC, Parkhill, J, Saul, A, Williamson, DA, Currie, BJ, Tong, SY, Dougan, G and Walker, MJ (2019). Atlas of group A streptococcal vaccine candidates compiled using large-scale comparative genomics. [Data Collection]. Nature Genetics. https://doi.org/10.1038/s41588-019-0417-8

Hawkey, J, Le Hello, S, Doublet, B, Granier, SA, Hendriksen, RS, Fricke, WF, Ceyssens, P, Gomart, C, Billman-Jacobe, H, Holt, KE and Weill, F (2019). Global phylogenomics of multidrug-resistant Salmonella enterica serotype Kentucky ST198. [Data Collection]. Microbial Genomics. https://doi.org/10.1099/mgen.0.000269

Vinh Pham, T, Van Nguyen, H, Rosas Aguirre, A, Van Nguyen, V, Cleves, MA, Nguyen, XX, Thanh Nguyen, T, Thanh Tran, D, Xuan Le, H, Hens, N, Rosanas-urgell, A, D’Alessandro, U, Speybroeck, N and Erhart, A (2019). Plasmodium vivax morbidity after radical cure: A cohort study in Central Vietnam. [Data Collection]. PLoS Medicine. https://doi.org/10.1371/journal.pmed.1002784

Sotillo, J, Pearson, MS, Becker, L, Mekonnen, GG, Amoah, AS, Dam, Gv, Corstjens, PL, Murray, J, Mduluza, T, Mutapi, F and Loukas, A (2019). In-depth proteomic characterization of Schistosoma haematobium: Towards the development of new tools for elimination. [Data Collection]. PLoS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0007362

Law, PJ, Timofeeva, M, Fernandez-Rozadilla, C, Broderick, P, Studd, J, Fernandez-Tajes, J, Farrington, S, Svinti, V, Palles, C, Orlando, G, Sud, A, Holroyd, A, Penegar, S, Theodoratou, E, Vaughan-Shaw, P, Campbell, H, Zgaga, L, Hayward, C, Campbell, A, Harris, S, Deary, IJ, Starr, J, Gatcombe, L, Pinna, M, Briggs, S, Martin, L, Jaeger, E, Sharma-Oates, A, East, J, Leedham, S, Arnold, R, Johnstone, E, Wang, H, Kerr, D, Kerr, R, Maughan, T, Kaplan, R, Al-Tassan, N, Palin, K, Hänninen, UA, Cajuso, T, Tanskanen, T, Kondelin, J, Kaasinen, E, Sarin, A, Eriksson, JG, Rissanen, H, Knekt, P, Pukkala, E, Jousilahti, P, Salomaa, V, Ripatti, S, Palotie, A, Renkonen-Sinisalo, L, Lepistö, A, Böhm, J, Mecklin, J, Buchanan, DD, Win, A, Hopper, J, Jenkins, ME, Lindor, NM, Newcomb, PA, Gallinger, S, Duggan, D, Casey, G, Hoffmann, P, Nöthen, MM, Jöckel, K, Easton, DF, Pharoah, PD, Peto, J, Canzian, F, Swerdlow, A, Eeles, RA, Kote-Jarai, Z, Muir, K, Pashayan, N, Harkin, A, Allan, K, McQueen, J, Paul, J, Iveson, T, Saunders, M, Butterbach, K, Chang-Claude, J, Hoffmeister, M, Brenner, H, Kirac, I, Matošević, P, Hofer, P, Brezina, S, Gsur, A, Cheadle, JP, Aaltonen, LA, Tomlinson, I, Houlston, RS and Dunlop, MG (2019). Association analyses identify 31 new risk loci for colorectal cancer susceptibility. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-019-09775-w

Prüss-Ustün, A, Wolf, J, Bartram, J, Clasen, T, Cumming, O, Freeman, MC, Gordon, B, Hunter, PR, Medlicott, K and Johnston, R (2019). Burden of disease from inadequate water, sanitation and hygiene for selected adverse health outcomes: An updated analysis with a focus on low- and middle-income countries. [Data Collection]. International Journal of Hygiene and Environmental Health. https://doi.org/10.1016/j.ijheh.2019.05.004

Patel, A, Perrin, AJ, Flynn, HR, Bisson, C, Withers-Martinez, C, Treeck, M, Flueck, C, Nicastro, G, Martin, SR, Ramos, A, Gilberger, TW, Snijders, AP, Blackman, MJ and Baker, D (2019). Cyclic AMP signalling controls key components of malaria parasite host cell invasion machinery. [Data Collection]. PLoS Biology. https://doi.org/10.1371/journal.pbio.3000264

Obolski, U, Perez, PN, Villabona Arenas, J, Thézé, J, Faria, NR and Lourenço, J (2019). MVSE: An R‐package that estimates a climate‐driven mosquito‐borne viral suitability index. [Data Collection]. Methods in Ecology and Evolution. https://doi.org/10.1111/2041-210X.13205

Shi, Y, Thompson, J, Walker, AS, Paton, N and Cheung, YB (2019). Mapping the medical outcomes study HIV health survey (MOS-HIV) to the EuroQoL 5 Dimension (EQ-5D-3 L) utility index. [Data Collection]. Health and Quality of Life Outcomes. https://doi.org/10.1186/s12955-019-1135-8

Borghini, L, Png, E, Binder, A, Wright, VJ, Pinnock, E, de Groot, R, Hazelzet, J, Emonts, M, Van der Flier, M, Schlapbach, LJ, Anderson, S, Secka, F, Salas, A, Fink, C, Carrol, ED, Pollard, AJ, Coin, LJ, Kuijpers, TW, Martinon-Torres, F, Zenz, W, Levin, M, Hibberd, M and Davila, S (2019). Identification of regulatory variants associated with genetic susceptibility to meningococcal disease. [Data Collection]. Scientific Reports. https://doi.org/10.1038/s41598-019-43292-6

Ashton, P, Thanh, L, Trieu, P, Van Anh, D, Trinh, N, Beardsley, J, Kibengo, F, Chierakul, W, Dance, D, Rattanavong, S, Davong, V, Hung, L, Chau, N, Tung, N, Chan, A, Thwaites, G, Lalloo, D, Anscombe, C, Nhat, L, Perfect, J, Dougan, G, Baker, S, Harris, S and Day, J (2019). Three phylogenetic groups have driven the recent population expansion of Cryptococcus neoformans. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-019-10092-5

Heinz, E, Brindle, R, Morgan-McCalla, A, Peters, K and Thomson, N (2019). Caribbean multi-centre study of Klebsiella pneumoniae: whole-genome sequencing, antimicrobial resistance and virulence factors. [Data Collection]. Microbial Genomics. https://doi.org/10.1099/mgen.0.000266

Küpers, LK, Monnereau, C, Sharp, GC, Yousefi, P, Salas, LA, Ghantous, AG, Page, CM, Reese, SE, Wilcox, AJ, Czamara, D, Starling, AP, Novoloaca, A, Lent, S, Roy, R, Hoyo, C, Breton, CV, Allard, C, Just, AC, Bakulski, KM, Holloway, JW, Everson, TM, Xu, C, Huang, R, van der Plaat, DA, Wielscher, M, Kebede Merid, S, Ullemar, V, Rezwan, FI, Lahti, J, van Dongen, J, Langie, SA, Richardson, TG, Magnus, MC, Nohr, EA, Xu, Z, Duijts, L, Zhao, S, Zhang, W, Plusquin, M, DeMeo, DL, Solomon, O, Heimovaara, JH, Jima, DD, Gao, L, Bustamante, M, Perron, P, Wright, RO, Hertz-Picciotto, I, Zhang, H, Karagas, MR, Gehring, U, Marsit, CJ, Beilin, LJ, Vonk, JM, Jarvelin, M, Bergström, A, Örtqvist, AK, Ewart, S, Villa, PM, Moore, S, Willemsen, G, Standaert, AR, Håberg, SE, Sørensen, TI, Taylor, JA, Räikkönen, K, Yang, IV, Kechris, K, Nawrot, TS, Silver, MJ, Gong, YY, Richiardi, L, Kogevinas, M, Litonjua, AA, Eskenazi, B, Huen, K, Mbarek, H, Maguire, RL, Dwyer, T, Vrijheid, M, Bouchard, L, Baccarelli, AA, Croen, LA, Karmaus, W, Anderson, D, de Vries, M, Sebert, S, Kere, J, Karlsson, R, Hasan Arshad, S, Hämäläinen, E, Routledge, MN, Boomsma, DI, Feinberg, AP, Newschaffer, CJ, Govarts, E, Moisse, M, Fallin, MD, Melén, E, Prentice, AM, Kajantie, E, Almqvist, C, Oken, E, Dabelea, D, Boezen, HM, Melton, PE, Wright, RJ, Koppelman, GH, Trevisi, L, Hivert, M, Sunyer, J, Munthe-Kaas, MC, Murphy, SK, Corpeleijn, E, Wiemels, J, Holland, N, Herceg, Z, Binder, EB, Smith, GD, Jaddoe, VW, Lie, RT, Nystad, W, London, SJ, Lawlor, DA, Relton, CL, Snieder, H and Felix, JF (2019). Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-019-09671-3

Penn-Nicholson, A, Hraha, T, Thompson, EG, Sterling, D, Kimbung Mbandi, S, Wall, K, Fisher, M, Suliman, S, Shankar, S, Hanekom, WA, Janjic, N, Hatherill, M, Kaufmann, SH, Sutherland, J, Walzl, G, De Groote, MA and Ochsner, U (2019). Discovery and validation of a prognostic proteomic signature for tuberculosis progression: A prospective cohort study. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1002781

Gladstone, RA, Lo, SW, Lees, JA, Croucher, NJ, van Tonder, AJ, Corander, J, Page, AJ, Marttinen, P, Bentley, LJ, Ochoa, TJ, Leung Ho, P, du Plessis, M, Cornick, JE, Kwambana-Adams, B, Benisty, R, Nzenze, SA, Madhi, SA, Hawkins, PA, Everett, DB, Antonio, M, Dagan, R, Klugman, KP, von Gottberg, A, McGee, L, Breiman, RF and Bentley, SD (2019). International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact. [Data Collection]. EBio Medicine. https://doi.org/10.1016/j.ebiom.2019.04.021

Wyres, KL, Wick, RR, Judd, LM, Froumine, R, Tokolyi, A, Gorrie, CL, Lam, MM, Duchêne, S, Jenney, A and Holt, K (2019). Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae. [Data Collection]. PLoS Genetics. https://doi.org/10.1371/journal.pgen.1008114

Dorman, MJ, Domman, D, Uddin, MI, Sharmin, S, Hassan Afrad, M, Begum, YA, Qadri, F and Thomson, NR (2019). High quality reference genomes for toxigenic and non-toxigenic Vibrio cholerae serogroup O139. [Data Collection]. Scientific Reports. https://doi.org/10.1038/s41598-019-41883-x

Dorman, MJ, Goulding, DA, Domman, D, Turnbull, JD, Cormie, C, Fazal, M, Goulding, DA, Russell, JE, Alexander, S and Thomson, NR (2019). The history, genome and biology of NCTC 30: a non-pandemic Vibrio cholerae isolate from World War One. [Data Collection]. Proceedings of the Royal Society B. https://doi.org/10.1098/rspb.2018.2025

Sallum, MAM, Conn, JE, Bergo, ES, Laporta, GZ, Chaves, LS, Bickersmith, SA, de Oliveira, TM, Figueira, EAG, Moresco, G, Lêuda, O, Struchiner, CJ, Yakob, L and Massad, E (2019). Vector competence, vectorial capacity of Nyssorhynchus darlingi and the basic reproduction number of Plasmodium vivax in agricultural settlements in the Amazonian Region of Brazil. [Data Collection]. Malaria Journal. https://doi.org/10.1186/s12936-019-2753-7

Wailan​, AM, Coll, F, Heinz, E, Tonkin-Hill, G, Corander, J, Feasey, NA and Thomson, NR (2019). rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree. [Data Collection]. Microbial Genomics. https://doi.org/10.1099/mgen.0.000264

Collett, CF, Kitson, C, Baker, N, Steele-stallard, HB, Santrot, MV, Hutchinson, S, Horn, D and Alsford, S (2019). Chemogenomic profiling of anti-leishmanial efficacy and resistance in the related kinetoplastid parasite Trypanosoma brucei. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB31973

Kwena, ZA, Njuguna, SW, Ssetala, A, Seeley, J, Nielsen, L, De Bont, J and Bukusi, EA (2019). HIV prevalence, spatial distribution and risk factors for HIV infection in the Kenyan fishing communities of Lake Victoria. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0214360

Winter, SC, Dreibelbis, R, Ningoma Dzombo,, M and Barchi, F (2019). A mixed-methods study of women’s sanitation utilization in informal settlements in Kenya. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0214114

Flueck, C, Drought, LG, Jones, A, Patel, A, Perrin, AJ, Walker, EM, Nofal, SD, Snijders, AP, Blackman, MJ and Baker, DA (2019). Phosphodiesterase beta is the master regulator of cAMP signalling during malaria parasite invasion. [Data Collection]. PLOS Biology. https://doi.org/10.1371/journal.pbio.3000154

Flueck, C, Drought, LG, Jones, A, Patel, A, Perrin, AJ, Walker, EM, Nofal, SD, Snijders, AP, Blackman, M and Baker, D (2019). Phosphodiesterase beta is the master regulator of cAMP signalling during malaria parasite invasion. [Data Collection]. PLoS Biology. https://doi.org/10.1371/journal.pbio.3000154

Musicha, P, Msefula, CL, Mather, AE, Chaguza, C, Cain, AK, Peno, C, Kallonen, T, Khonga, M, Denis, B, Gray, KJ, Heyderman, RS, Thomson, NR, Everett, DB and Feasey, NA (2019). Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages. [Data Collection]. Journal of Antimicrobial Chemotherapy. https://doi.org/10.1093/jac/dkz032

Lam, MMC, Wyres, KL, Wick, RR, Judd, LM, Fostervold, A, Holt, KE and Löhr, IH (2019). Convergence of virulence and MDR in a single plasmid vector in MDR Klebsiella pneumoniae ST15. [Data Collection]. Journal of Antimicrobial Chemotherapy. https://doi.org/10.1093/jac/dkz028

Goldacre, B, Drysdale, H, Dale, A, Milosevic, I, Slade, E, Hartley, P, Marston, C, Powell-Smith, A, Heneghan, C and Mahtani, KR (2019). COMPare: a prospective cohort study correcting and monitoring 58 misreported trials in real time. [Data Collection]. Trials. https://doi.org/10.1186/s13063-019-3173-2

Boinett, CJ, Cain, AK, Hawkey, J, Do Hoang, NT, Khanh, NNT, Thanh, DP, Dordel, J, Campbell, JI, Lan, NPH, Mayho, M, Langridge, GC, Hadfield, J, Chau, NVV, Thwaites, GE, Parkhill, J, Thomson, NR, Holt, KE and Baker, S (2019). Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii. [Data Collection]. Microbial genomics. https://doi.org/10.1099/mgen.0.000246

Mavaddat, N, Michailidou, K, Dennis, J, Lush, M, Fachal, L, Lee, A, Tyrer, JP, Chen, T, Wang, Q, Bolla, MK, Yang, X, Adank, MA, Ahearn, T, Aittomäki, K, Allen, J, Andrulis, IL, Anton-Culver, H, Antonenkova, NN, Arndt, V, Aronson, KJ, Auer, PL, Auvinen, P, Barrdahl, M, Beane Freeman, LE, Beckmann, MW, Behrens, S, Benitez, J, Bermisheva, M, Bernstein, L, Blomqvist, C, Bogdanova, NV, Bojesen, SE, Bonanni, B, Børresen-Dale, A, Brauch, H, Bremer, M, Brenner, H, Brentnall, A, Brock, IW, Brooks-Wilson, A, Brucker, SY, Brüning, T, Burwinkel, B, Campa, D, Carter, BD, Castelao, JE, Chanock, SJ, Chlebowski, R, Christiansen, H, Clarke, CL, Collée, JM, Cordina-Duverger, E, Cornelissen, S, Couch, FJ, Cox, A, Cross, SS, Czene, K, Daly, MB, Devilee, P, Dörk, T, Dos santos silva, I, Dumont, M, Durcan, L, Dwek, M, Eccles, DM, Ekici, AB, Eliassen, AH, Ellberg, C, Engel, C, Eriksson, M, Evans, DG, Fasching, PA, Figueroa, J, Fletcher, O, Flyger, H, Försti, A, Fritschi, L, Gabrielson, M, Gago-Dominguez, M, Gapstur, SM, García-Sáenz, JA, Gaudet, MM, Georgoulias, V, Giles, GG, Gilyazova, IR, Glendon, G, Goldberg, MS, Goldgar, DE, González-Neira, A, Grenaker Alnæs, GI, Grip, M, Gronwald, J, Grundy, A, Guénel, P, Haeberle, L, Hahnen, E, Haiman, CA, Håkansson, N, Ute Hamann, UH, Hankinson, SE, Harkness, EF, Hart, SN, He, W, Hein, A, Heyworth, J, Hillemanns, P, Hollestelle, A, Hooning, MJ, Hoover, RN, Hopper, JL, Howell, A, Huang, G, Humphreys, K, Hunter, DJ, Jakimovska, M, Jakubowska, A, Janni, W, John, EM, Johnson, N, Jones, ME, Jukkola-Vuorinen, A, Jung, A, Kaaks, R, Kaczmarek, K, Kataja, V, Keeman, R, Kerin, MJ, Khusnutdinova, E, Kiiski, JI, Knight, JA, Ko, Y, Kosma, V, Koutros, S, Kristensen, VN, Krüger, U, Kühl, T, Lambrechts, D, Le Marchand, L, Lee, E, Lejbkowicz, F, Lilyquist, J, Lindblom, A, Lindström, S, Lissowska, J, Lo, W, Loibl, S, Long, J, Lubiński, J, Lux, MP, MacInnis, RJ, Maishman, T, Makalic, E, Kostovska, IM, Mannermaa, A, Manoukian, S, Margolin, S, Martens, JW, Martinez, ME, Mavroudis, D, McLean, C, Meindl, A, Menon, U, Middha, P, Miller, N, Moreno, F, Mulligan, AM, Mulot, C, Muñoz-Garzon, VM, Neuhausen, SL, Nevanlinna, H, Neven, P, Newman, WG, Nielsen, SF, Nordestgaard, BG, Norman, A, Offit, K, Olson, JE, Olsson, H, Orr, N, Pankratz, VS, Park-Simon, T, Perez, JI, Pérez-Barrios, C, Peterlongo, P, Peto, J, Pinchev, M, Plaseska-Karanfilska, D, Polley, EC, Prentice, R, Presneau, N, Prokofyeva, D, Purrington, K, Pylkäs, K, Rack, B, Radice, P, Rau-Murthy, R, Rennert, G, Rennert, HS, Rhenius, V, Robson, M, Romero, A, Ruddy, KJ, Ruebner, M, Saloustros, E, Sandler, DP, Sawyer, EJ, Schmidt, DF, Schmutzler, RK, Schneeweiss, A, Schoemaker, MJ, Schumacher, F, Schürmann, P, Schwentner, L, Scott, C, Scott, RJ, Seynaeve, C, Shah, M, Sherman, ME, Shrubsole, MJ, Shu, X, Slager, S, Smeets, A, Sohn, C, Soucy, P, Southey, MC, Spinelli, JJ, Stegmaier, C, Stone, J, Swerdlow, AJ, Tamimi, RM, Tapper, WJ, Taylor, JA, Terry, MB, Thöne, K, Tollenaar, RA, Tomlinson, I, Truong, T, Tzardi, M, Ulmer, H, Untch, M, Vachon, CM, van Veen, EM, Vijai, J, Weinberg, CR, Wendt, C, Whittemore, AS, Wildiers, H, Willett, W, Winqvist, R, Wolk, A, Yang, XR, Yannoukakos, D, Zhang, Y, Zheng, W, Ziogas, A, Dunning, AM, Thompson, DJ, Chenevix-Trench, G, Chang-Claude, J, Schmidt, MK, Hall, P, Milne, RL, Pharoah, PD, Antoniou, AC, Chatterjee, N, Kraft, P, García-Closas, M, Simard, J and Easton, DF (2019). Polygenic Risk Scores for Prediction of Breast Cancer and Breast Cancer Subtypes. [Data Collection]. AJHG. https://doi.org/10.1016/j.ajhg.2018.11.002

Cortes, T and Carvalho, L (2018). Whole genome sequencing of Mycobacterium tuberculosis strains resistant to D-cycloserine. [Data Collection]. ArrayExpress. https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-5935/

McNeill, E, Stylianou, E, Crabtree, MJ, Harrington-Kandt, R, Kolb, A, Diotallevi, M, Hale, AB, Bettencourt, P, Tanner, R, O’Shea, MK, Matsumiya, M, Lockstone, H, Müller, J, Fletcher, HA, Greaves, DR, McShane, H and Channon, KM (2018). Regulation of mycobacterial infection by macrophage Gch1 and tetrahydrobiopterin. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-018-07714-9

de Lencastre, H, Manna, S, Dunne, EM, Ortika, BD, Pell, CL, Kama, M, Russell, FM, Mungun, T, Mulholland, KE, Hinds, J and Satzke, C (2018). Discovery of a Streptococcus pneumoniae serotype 33F capsular polysaccharide locus that lacks wcjE and contains a wcyO pseudogene. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0206622

Giuliani, S, Silva, AC, Borba, Joyce V. V. B., Ramos, PIP, Paveley, RA, Muratov, EN, Andrade, CH and Furnham, N (2018). Computationally-guided drug repurposing enables the discovery of kinase targets and inhibitors as new schistosomicidal agents. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1006515

Cano, J, Rodríguez, A, Simpson, H, Tabah, EN, Gómez, JF and Pullan, RL (2018). Additional file 2: of Modelling the spatial distribution of aquatic insects (Order Hemiptera) potentially involved in the transmission of Mycobacterium ulcerans in Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.7056800.v1

van Meijgaarden, KE, Khatri, B, Smith, SG, Drittij, Anne M. F. H., de Paus, RA, Goeman, JJ, Ho, MM, Dockrell, HM, McShane, H, Joosten, SA and Ottenhoff, THM (2018). Raw data for "Cross-laboratory evaluation of multiplex bead assays including independent common reference standards for immunological monitoring of observational and interventional human studies". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0201205.s004

Sobkowiak, B, Glynn, JR, Houben, Rein M. G. J., Mallard, K, Phelan, JE, Guerra-Assunção, JA, Banda, L, Mzembe, T, Viveiros, M, McNerney, R, Parkhill, J, Crampin, AC and Clark, TG (2018). Additional file 1: of Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.6968636.v1

Higgins, M, Ravenhall, M, Ward, D, Phelan, J, Ibrahim, A, Forrest, MS, Clark, TG, Campino, S and Hancock, J (2018). PrimedRPA: Primer design for Recombinase polymerase amplification assays. [Data Collection]. BioInformatics. https://doi.org/10.1093/bioinformatics/bty701

Shitaye, G, Gadisa, E, Grignard, L, Shumie, G, Chali, W, Menberu, T, Belachew, M, Tegegn, G, Challi, S, Curry, J, Mahey, L, Hailu, T, Mamo, H, Menon, M, Balcha, T, Aseffa, A, Drakeley, C, Bousema, T and Tadesse, FG (2018). Low and heterogeneous prevalence of glucose-6-phosphate dehydrogenase deficiency in different settings in Ethiopia using phenotyping and genotyping approaches. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.4187285.v1

M. C. Lam, M, Wyres, KL, Duchêne, S, Wick, RR, Judd, LM, Gan, Y, Hoh, C, Archuleta, S, Molton, JS, Kalimuddin, S, Koh, TH, Passet, V, Brisse, S and Holt, KE (2018). Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination. [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-018-05114-7

Kessler, NJ, Waterland, RA, Prentice, AM and Silver, MJ (2018). Establishment of environmentally sensitive DNA methylation states in the very early human embryo - Supplementary Materials. [Data Collection]. Science Advances. http://advances.sciencemag.org/content/suppl/2018/07/09/4.7.eaat2624.DC1

Ugarte-Ruiz, M, Domínguez, L, Corcionivoschi, N, Wren, BW, Dorrell, N and Gundogdu, O (2018). Exploring the oxidative, antimicrobial and genomic properties of Campylobacter jejuni strains isolated from poultry. [Data Collection]. Research in Veterinary Science. https://doi.org/10.1016/j.rvsc.2018.06.016

Horton, KC, Sumner, T, Houben, Rein M G J, Corbett, EL and White, RG (2018). A Bayesian approach to understanding gender differences in tuberculosis disease burden. [Data Collection]. American Journal of Epidemiology. https://doi.org/10.1093/aje/kwy131

Amambua-Ngwa, A, Jeffries, D, Amato, R, Worwui, A, Karim, M, Ceesay, S, Nyang, H, Nwakanma, D, Okebe, J, Kwiatkowski, D, Conway, DJ and D’Alessandro, U (2018). Consistent signatures of selection from genomic analysis of pairs of temporal and spatial Plasmodium falciparum populations from The Gambia. [Data Collection]. Scientific Reports. https://doi.org/10.1038/s41598-018-28017-5

Roberts, CH, Ouburg, S, Preston, MD, de Vries, HJC, Holland, MJ and Morré, SA (2018). Results of pathway enrichment analysis using Database for Annotation, Visualization and Integrated Discovery (DAVID). [Data Collection]. Mediators of Inflammation. https://doi.org/10.1155/2018/3434101.

Sepúlveda, N, Phelan, J, Diez-Benavente, E, Campino, S, Clark, TG, Hopkins, H, Sutherland, C, Drakeley, CJ and Beshir, KB (2018). Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. [Data Collection]. Infection, Genetics and Evolution. https://doi.org/10.1016/j.meegid.2018.04.039

Luque-Fernandez, MA, Schomaker, M, Rachet, B and Schnitzer, ME (2018). Targeted maximum likelihood estimation for a binary treatment: A tutorial. [Data Collection]. Github. https://github.com/migariane/SIM-TMLE-tutorial

Abolins, S, Lazarou, L, Weldon, L, Hughes, L, King, EC, Drescher, P, Pocock, MJO, Hafalla, JCR, Riley, EM and Viney, M (2018). The ecology of immune state in a wild mammal, Mus musculus domesticus. [Data Collection]. PLOS Biology. https://doi.org/10.1371/journal.pbio.2003538

Abolins, S, Lazarou, L, Weldon, L, Hughes, L, King, EC, Drescher, P, Pocock, MJO, Hafalla, JCR, Riley, EM and Viney, M (2018). The ecology of immune state in a wild mammal, Mus musculus domesticus. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pbio.2003538

Early, AM, Lievens, M, MacInnis, BL, Ockenhouse, CF, Volkman, SK, Adjei, S, Agbenyega, T, Ansong, D, Gondi, S, Greenwood, B, Hamel, M, Odero, C, Otieno, K, Otieno, W, Owusu-agyei, S, Asante, KP, Sorgho, H, Tina, L, Tinto, H, Valea, I, Wirth, DF and Neafsey, DE (2018). Electronic Supplementary Material for: "Host-mediated selection impacts the diversity of Plasmodium falciparum antigens within infections". [Data Collection]. Nature Communications. https://www.nature.com/articles/s41467-018-03807-7#Sec13

Vasileva, H, Butcher, RMR and Roberts, C (2018). Conjunctival transcriptome profiling of Solomon Islanders with active trachoma but without ocular Chlamydia trachomatis infection. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE106961

Stone, WJR, Campo, JJ, Ouédraogo, AL, Meerstein-Kessel, L, Morlais, I, Da, D, Cohuet, A, Nsango, S, Sutherland, CJ, van de Vegte-Bolmer, M, Siebelink-Stoter, R, van Gemert, G, Graumans, W, Lanke, K, Shandling, AD, Pablo, JV, Teng, AA, Jones, S, de Jong, RM, Fabra-García, A, Bradley, J, Roeffen, W, Lasonder, E, Gremo, G, Schwarzer, E, Janse, CJ, Singh, SK, Theisen, M, Felgner, P, Marti, M, Drakeley, C, Sauerwein, R, Bousema, T and Jore, MM (2018). Data from: Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. [Data Collection]. Dryad Digital Repository. https://doi.org/10.5061/dryad.8bp05

McCarthy, K, Fielding, K, Churchyard, GJ and Grant, AD (2018). Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0191608.s001

Currier, RB, Cooper, A, Burrell-saward, H, MacLeod, A and Alsford, S (2018). Decoding the network of Trypanosoma brucei proteins that determines sensitivity to apolipoprotein-L1. [Data Collection]. Figshare. https://doi.org/10.1371/journal.ppat.1006855

Wilson, E, Free, C, Morris, TP, Syred, J, Ahamed, I, Menon-Johansson, AS, Palmer, MJ, Barnard, S, Rezel, E and Baraitser, P (2017). S1 Data for "Internet-accessed sexually transmitted infection (e-STI) testing and results service: A randomised, single-blind, controlled trial". [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1002479.s001

Domman, D, Quilici, M, Dorman, MJ, Njamkepo, E, Mutreja, A, Mather, AE, Delgado, G, Morales-Espinosa, R, Grimont, PAD, Lizárraga-Partida, ML, Bouchier, C, Aanensen, DM, Kuri-Morales, P, Tarr, CL, Dougan, G, Parkhill, J, Campos, J, Cravioto, A, Weill, F and Thomson, NR (2017). Integrated view of Vibrio cholerae in the Americas. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.5427253.v1

Saffari, A and Silver, M (2017). DNA methylation in children from The Gambia. [Data Collection]. NCBI Gene Expression Omnibus (GEO). https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE99863

Messenger, LA, Shililu, J, Irish, SR, Anshebo, GY, Tesfaye, AG, Ye-Ebiyo, Y, Chibsa, S, Dengela, D, Dissanayake, G, Kebede, E, Zemene, E, Asale, A, Yohannes, M, Taffese, HS, George, K, Fornadel, C, Seyoum, A, Wirtz, RA and Yewhalaw, D (2017). MOESM1 of Insecticide resistance in Anopheles arabiensis from Ethiopia (2012-2016): a nationwide study for insecticide resistance monitoring. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3934171_D1

Marks, M (2017). Data for: Incidental mosquitocidal effect of an ivermectin mass drug administration on Anopheles farauti conducted for scabies control in the Solomon Islands. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.267.

Weill, F, Domman, D, Njamkepo, E, Tarr, C, Rauzier, J, Fawal, N, Keddy, KH, Salje, H, Moore, S, Mukhopadhyay, AK, Bercion, R, Luquero, FJ, Ngandjio, A, Dosso, M, Monakhova, E, Garin, B, Bouchier, C, Pazzani, C, Mutreja, A, Grunow, R, Sidikou, F, Bonte, L, Breurec, S, Damian, M, Njanpop-Lafourcade, B, Sapriel, G, Page, A, Hamze, M, Henkens, M, Chowdhury, G, Mengel, M, Koeck, J, Fournier, J, Dougan, G, Grimont, PAD, Parkhill, J, Holt, KE, Piarroux, R, Ramamurthy, T, Quilici, M and Thomson, NR (2017). Genomic history of the seventh pandemic of cholera in Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.5314822.v3

Masala, G, Lipsitch, M, Bottomley, C and Flasche, S (2017). Supplementary material from "Exploring the role of competition induced by non-vaccine serotypes for herd protection following pneumococcal vaccination". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3911881.v1

VanHoek, A (2017). Economic evaluation of HIV-exposure Prophylaxis among men who have sex with men in England: Supplementary material. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/PUBS.04433707

Diez Benavente, E, Florez de Sessions, P, Moon, RW, Holder, AA, Blackman, MJ, Roper, C, Drakeley, CJ, Pain, A, Sutherland, CJ, Hibberd, ML, Campino, S and Clark, TG (2017). Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pgen.1007008

Cortes, T, Schubert, OT, Banaei-Esfahani, A, Collins, BC, Aebersold, R and Young, DB (2017). Time course RNA-seq of Mycobacterium tuberculosis exposed to nitric oxide. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-5557/

The, HC, Florez de Sessions, P, Jie, S, Pham Thanh, D, Thompson, CN, Nguyen Ngoc Minh, C, Chu, CW, Tran, T, Thomson, NR, Thwaites, GE, Rabaa, MA, Hibberd, M and Baker, S (2017). Assessing gut microbiota perturbations during the early phase of infectious diarrhea in Vietnamese children. [Data Collection]. Gut microbes. http://www.tandfonline.com/doi/suppl/10.1080/19490976.2017.1361093

Mcquaid, CF, van den Bosch, F, Szyniszewska, A, Alicai, T, Pariyo, A, Chikoti, PC and Gilligan, CA (2017). Spatial dynamics and control of a crop pathogen with mixed-mode transmission. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1005654

Sabatini, R, Stortz, JA, Serafim, TD, Alsford, S, Wilkes, J, Fernandez-Cortes, F, Hamilton, G, Briggs, E, Lemgruber, L, Horn, D, Mottram, JC and McCulloch, R (2017). Genome-wide and protein kinase-focused RNAi screens reveal conserved and novel damage response pathways in Trypanosoma brucei. [Data Collection]. Figshare. https://doi.org/10.1371/journal.ppat.1006477

Kallonen, T, Brodrick, HJ, Harris, SR, Corander, J, Brown, NM, Martin, V, Peacock, SJ and Parkhill, J (2017). Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.1101/gr.216606.116

Schnapp, LM, Blount, RJ, Daly, KR, Fong, S, Chang, E, Grieco, K, Greene, M, Stone, S, Balmes, J, Miller, RF, Walzer, PD and Huang, L (2017). Effects of clinical and environmental factors on bronchoalveolar antibody responses to Pneumocystis jirovecii: A prospective cohort study of HIV+ patients. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0180212

Ruis, C, Roy, S, Brown, JR, Allen, DJ, Goldstein, RA and Breuer, J (2017). The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0179572

Diallo, K, Gamougam, K, Daugla, DM, Harrison, OB, Bray, JE, Caugant, DA, Lucidarme, J, Trotter, CL, Hassan-King, M, Stuart, JM, Manigart, O, Greenwood, BM and Maiden, MCJ (2017). Hierarchical genomic analysis of carried and invasive serogroup A Neisseria meningitidis during the 2011 epidemic in Chad. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3785438

Johnson, A and Mercer, C (2017). National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Secure Access. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. http://doi.org/10.5255/UKDA-SN-8178-1

Hanron, AE, Billman, ZP, Seilie, AM, Olsen, TM, Fishbaugher, M, Chang, M, Rueckle, T, Andenmatten, N, Greenhouse, B, Arinaitwe, E, Rek, J, Das, S, Domingo, GJ, Shipman, K, Kappe, SH, Kublin, JG and Murphy, SC (2017). Multiplex, DNase-free one-step reverse transcription PCR for Plasmodium 18S rRNA and spliced gametocyte-specific mRNAs. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3784184

Abolins, S, King, E, Lazarou, L, Weldon, L, Hughes, L, Drescher, P, Raynes, J, Hafalla, J, Viney, ME and Riley, E (2017). Supplementary Data for: "The comparative immunology of wild and laboratory mice, Mus musculus domesticus". [Data Collection]. Nature Communications. https://www.nature.com/articles/ncomms14811#supplementary-information

Proaño, A, Bravard, MA, López, JW, Lee, GO, Bui, D, Datta, S, Comina, G, Zimic, M, Coronel, J, Caviedes, L, Cabrera, JL, Salas, A, Ticona, E, Vu, NM, Kirwan, DE, Loader, MI, Friedland, JS, Moore, DAJ, Evans, CA, Tracey, BH and Gilman, RH (2017). Data from: Dynamics of cough frequency in adults undergoing treatment for pulmonary tuberculosis. [Data Collection]. Dryad Digital Repository. https://doi.org/10.5061/dryad.gv234

Pickering, H, Burr, SE, Derrick, T, Makalo, P, Joof, H, Hayward, RD and Martin J., MJ (2017). Profiling and validation of individual and patterns of Chlamydia trachomatis-specific antibody responses in trachomatous trichiasis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3716170.

Murray, L (2017). Data for: "Investigations into the within-host genomic diversity and phenotypic variation of Plasmodium falciparum". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.202.

Ofori-Anyinam, B, Dolganov, G, Van, T, Davis, JL, Walter, ND, Garcia, BJ, Voskuil, M, Fissette, K, Diels, M, Driesen, M, Meehan, CJ, Yeboah-Manu, D, Coscolla, M, Gagneux, S, Antonio, M, Schoolnik, G, Gehre, F and de Jong, BC (2017). Significant under expression of the DosR regulon in M. tuberculosis complex lineage 6 in sputum. [Data Collection]. Tuberculosis. https://doi.org/10.1016/j.tube.2017.03.001

Moradigaravand, D, Martin, V, Peacock, S and Parkhill, J (2017). Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland. [Data Collection]. mBio. https://doi.org/10.1128/mBio.01976-16

Nyiro, JU, Sande, CJ, Mutunga, M, Kiyuka, PK, Munywoki, PK, Scott, JAG and Nokes, DJ (2016). Absence of Association between Cord Specific Antibody Levels and Severe Respiratory Syncytial Virus (RSV) Disease in Early Infants: A Case Control Study from Coastal Kenya. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0166706.

Kambiré, D, Soeters, HM, Ouédraogo-Traoré, R, Medah, I, Sangare, L, Yaméogo, I, Sawadogo, G, Ouédraogo, A, Hema-Ouangraoua, S, McGee, L, Srinivasan, V, Aké, F, Congo-Ouédraogo, M, Sanou, S, Ky Ba, A, Novak, RT and Van Beneden, C (2016). Nationwide Trends in Bacterial Meningitis before the Introduction of 13-Valent Pneumococcal Conjugate Vaccine—Burkina Faso, 2011–2013. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0166384

Martinón-Torres, F, Png, E, Khor, CC, Davila, S, Wright, VJ, Sim, KS, Vega, A, Fachal, L, Inwald, D, Nadel, S, Carrol, ED, Martinón-Torres, N, Alonso, SM, Carracedo, A, Morteruel, E, López-Bayón, J, Torre, AC, Monge, CC, de Aguilar, PAG, Torné, EE, Martínez-Padilla, MdC, Martinón-Sánchez, JM, Levin, M, Hibberd, ML and Salas, A (2016). Natural resistance to Meningococcal Disease related to CFH loci: Meta-analysis of genome-wide association studies. [Data Collection]. Scientific Reports. https://doi.org/10.1038/srep35842

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Raw data for RBC, Hb and haematocrit from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.161532

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Nano LC MS-MS peptide matches from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.160744

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Raw data for SELDI-TOF high range from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.160743

Lewin, A, Hamilton, S, Witkover, A, Langford, P, Nicholas, R, Chataway, J and Bangham, CR (2016). Raw data for SELDI-TOF low range from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.160737

Salgueiro, P, Lopes, AS, Mendes, C, Charlwood, JD, Arez, AP, Pinto, J and Silveira, H (2016). Molecular evolution and population genetics of a Gram-negative binding protein gene in the malaria vector Anopheles gambiae (sensu lato). [Data Collection]. Parasites & Vectors. https://doi.org/10.1186/s13071-016-1800-2.

Williamson, AE, Ylioja, PM, Robertson, MN, Antonova-Koch, Y, Avery, V, Baell, JB, Batchu, H, Batra, S, Burrows, JN, Bhattacharyya, S, Calderon, F, Charman, SA, Clark, J, Crespo, B, Dean, M, Debbert, SL, Delves, M, Dennis, ASM, Deroose, F, Duffy, S, Fletcher, S, Giaever, G, Hallyburton, I, Gamo, F, Gebbia, M, Guy, RK, Hungerford, Z, Kirk, K, Lafuente-Monasterio, MJ, Lee, A, Meister, S, Nislow, C, Overington, JP, Papadatos, G, Patiny, L, Pham, J, Ralph, SA, Ruecker, A, Ryan, E, Southan, C, Srivastava, K, Swain, C, Tarnowski, MJ, Thomson, P, Turner, P, Wallace, IM, Wells, TNC, White, K, White, L, Willis, P, Winzeler, EA, Wittlin, S and Todd, MH (2016). Open Source Drug Discovery: Highly Potent Antimalarial Compounds Derived from the Tres Cantos Arylpyrroles. [Data Collection]. ACS Central Science. https://doi.org/10.1021/acscentsci.6b00086

Dhalla, K, Cousens, S, Bowman, R, Wood, M and Murdoch, I (2016). Is Beta Radiation Better than 5 Flurouracil as an Adjunct for Trabeculectomy Surgery When Combined with Cataract Surgery? A Randomised Controlled Trial. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0161674.

Butcher, RMR, Sokana, O, Jack, K, Macleod, CK, Marks, ME, Kalae, E, Sui, L, Russell, C, Tutill, HJ, Williams, RJ, Breuer, J, Willis, R, Le Mesurier, RT, Mabey, DCW, Solomon, AW and Roberts, Ch (2016). Low Prevalence of Conjunctival Infection with Chlamydia trachomatis in a Treatment-Naïve Trachoma-Endemic Region of the Solomon Islands. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0004863.

Thiha, N, Chinnakali, P, Harries, AD, Shwe, M, Balathandan, TP, Thein Than Tun, S, Das, M, Tin, HH, Yi, Y, Babin, FX, Lwin, TT and Clevenbergh, PA (2016). S1 Data for: "Is There a Need for Viral Load Testing to Assess Treatment Failure in HIV-Infected Patients Who Are about to Change to Tenofovir-Based First-Line Antiretroviral Therapy? Programmatic Findings from Myanmar". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0160616.s001

Warhurst, DC, Craig, JC and Raheem, KS (2016). Influence of LAR and VAR on Para-Aminopyridine Antimalarials Targetting Haematin in Chloroquine-Resistance. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0160091.

Van Voorhis, WC, Adams, JH, Adelfio, R, Ahyong, V, Akabas, MH, Alano, P, Alday, A, Alemán Resto, Y, Alsibaee, A, Alzualde, A, Andrews, KT, Avery, SV, Avery, VM, Ayong, L, Baker, M, Baker, S, Ben Mamoun, C, Bhatia, S, Bickle, Q, Bounaadja, L, Bowling, T, Bosch, J, Boucher, LE, Boyom, FF, Brea, J, Brennan, M, Burton, A, Caffrey, CR, Camarda, G, Carrasquilla, M, Carter, D, Belen Cassera, M, Chih-Chien Cheng, K, Chindaudomsate, W, Chubb, A, Colon, BL, Colón-López, DD, Corbett, Y, Crowther, GJ, Cowan, N, D’Alessandro, S, Le Dang, N, Delves, M, DeRisi, JL, Du, AY, Duffy, S, Abd El-Salam El-Sayed, S, Ferdig, MT, Fernández Robledo, JA, Fidock, DA, Florent, I, Fokou, PVT, Galstian, A, Gamo, FJ, Gokool, S, Gold, B, Golub, T, Goldgof, GM, Guha, R, Guiguemde, WA, Gural, N, Guy, RK, Hansen, MAE, Hanson, KK, Hemphill, A, Hooft van Huijsduijnen, R, Horii, T, Horrocks, P, Hughes, TB, Huston, C, Igarashi, I, Ingram-Sieber, K, Itoe, MA, Jadhav, A, Naranuntarat Jensen, A, Jensen, LT, Jiang, RHY, Kaiser, A, Keiser, J, Ketas, T, Kicka, S, Kim, S, Kirk, K, Kumar, VP, Kyle, DE, Lafuente, MJ, Landfear, S, Lee, N, Lee, S, Lehane, AM, Li, F, Little, D, Liu, L, Llinás, M, Loza, MI, Lubar, A, Lucantoni, L, Lucet, I, Maes, L, Mancama, D, Mansour, NR, March, S, McGowan, S, Medina Vera, I, Meister, S, Mercer, L, Mestres, J, Mfopa, AN, Misra, RN, Moon, S, Moore, JP, Morais Rodrigues da Costa, F, Müller, J, Muriana, A, Nakazawa Hewitt, S, Nare, B, Nathan, C, Narraidoo, N, Nawaratna, S, Ojo, KK, Ortiz, D, Panic, G, Papadatos, G, Parapini, S, Patra, K, Pham, N, Prats, S, Plouffe, DM, Poulsen, S, Pradhan, A, Quevedo, C, Quinn, RJ, Rice, CA, Abdo Rizk, M, Ruecker, A, St. Onge, R, Salgado Ferreira, R, Samra, J, Robinett, NG, Schlecht, U, Schmitt, M, Silva Villela, F, Silvestrini, F, Sinden, R, Smith, DA, Soldati, T, Spitzmüller, A, Stamm, SM, Sullivan, DJ, Sullivan, W, Suresh, S, Suzuki, BM, Suzuki, Y, Swamidass, SJ, Taramelli, D, Tchokouaha, LRY, Theron, A, Thomas, D, Tonissen, KF, Townson, S, Tripathi, AK, Trofimov, V, Udenze, KO, Ullah, I, Vallieres, C, Vigil, E, Vinetz, JM, Voong Vinh, P, Vu, H, Watanabe, N, Weatherby, K, White, PM, Wilks, AF, Winzeler, EA, Wojcik, E, Wree, M, Wu, W, Yokoyama, N, Zollo, PHA, Abla, N, Blasco, B, Burrows, J, Laleu, B, Leroy, D, Spangenberg, T, Wells, T and Willis, PA (2016). Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. [Data Collection]. Figshare. https://doi.org/10.1371/journal.ppat.1005763.

Li, M, Taylor, EG, Atkins, KE, Chapman, GB and Galvani, AP (2016). Stimulating Influenza Vaccination via Prosocial Motives. [Data Collection]. PLoS One. http://dx.doi.org/10.1371/journal.pone.0159780

McLachlan, S, Giambartolomei, C, White, J, Charoen, P, Wong, A, Finan, C, Engmann, J, Shah, T, Hersch, M, Podmore, C, Cavadino, A, Jefferis, BJ, Dale, CE, Hypponen, E, Morris, RW, Casas, JP, Kumari, M, Ben-Shlomo, Y, Gaunt, TR, Drenos, F, Langenberg, C, Kuh, D, Kivimaki, M, Rueedi, R, Waeber, G, Hingorani, AD, Price, JF and Walker, AP (2016). Replication and Characterization of Association between ABO SNPs and Red Blood Cell Traits by Meta-Analysis in Europeans. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0156914

Ochola-Oyier, LI, Okombo, J, Wagatua, N, Ochieng, J, Tetteh, KK, Fegan, G, Bejon, P and Marsh, K (2016). Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population. [Data Collection]. Malaria Journal. https://doi.org/10.1186/s12936-016-1304-8.

Mansour, NR, Paveley, R, Gardner, JMF, Bell, AS, Parkinson, T and Bickle, Q (2016). High Throughput Screening Identifies Novel Lead Compounds with Activity against Larval, Juvenile and Adult Schistosoma mansoni. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0004659.

Carpenter, DO, Svefors, P, Rahman, A, Ekström, E, Khan, AI, Lindström, E, Persson, LÅ and Ekholm Selling, K (2016). Stunted at 10 Years. Linear Growth Trajectories and Stunting from Birth to Pre-Adolescence in a Rural Bangladeshi Cohort. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0149700

Tusting, LS, Rek, J, Arinaitwe, E, Staedke, SG, Kamya, MR, Cano, J, Bottomley, C, Johnston, D, Dorsey, G, Lindsay, SW and Lines, J (2016). Additional file 4: of Why is malaria associated with poverty? Findings from a cohort study in rural Uganda. [Data Collection]. Figshare. http://doi.org/10.6084/m9.figshare.c.3641432_D2.v1

Duchêne, S, Holt, KE, Weill, F, Le Hello, S, Hawkey, J, Edwards, DJ, Fourment, M and Holmes, EC (2016). Bacteria genomic rates data: First release. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.45951

Wang, X, Zheng, D, Arima, H, Sato, S, Gasparrini, A, Heeley, E, Delcourt, C, Lo, S, Huang, Y, Wang, J, Stapf, C, Robinson, T, Lavados, P, Chalmers, J and Anderson, CS (2016). Low Ambient Temperature and Intracerebral Hemorrhage: The INTERACT2 Study. [Data Collection]. PLoS One. https://doi.org/10.1371/journal.pone.0149040.

Derrick, T, Last, AR, Burr, SE, Roberts, Ch, Nabicassa, M, Cassama, E, Bailey, RL, Mabey, DCW, Burton, MJ and Holland, MJ (2016). Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE69837

Phelan, JE, Coll, F, Bergval, I, Anthony, RM, Warren, R, Sampson, SL, Gey van Pittius, NC, Glynn, JR, Crampin, AC, Alves, A, Bessa, TB, Campino, S, Dheda, K, Grandjean, L, Hasan, R, Hasan, Z, Miranda, A, Moore, D, Panaiotov, S, Perdigao, J, Portugal, I, Sheen, P, de Oliveira Sousa, E, Streicher, EM, van Helden, PD, Viveiros, M, Hibberd, ML, Pain, A, Mcnerney, R and Clark, TG (2016). Data for: "Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. http://pathogenseq.lshtm.ac.uk/pe_ppe/

Arjyal, A, Basnyat, B, Nhan, HT, Koirala, S, Giri, A, Joshi, N, Shakya, M, Pathak, KR, Mahat, SP, Prajapati, SP, Adhikari, N, Thapa, R, Merson, L, Gajurel, D, Lamsal, K, Lamsal, D, Yadav, BK, Shah, G, Shrestha, P, Dongol, S, Karkey, A, Thompson, C, Thieu, NTV, Thanh, DP, Baker, S, Thwaites, GE, Wolbers, M and Dolecek, C (2016). Gatifloxacin versus ceftriaxone for uncomplicated enteric fever in Nepal: an open-label, two-centre, randomised controlled trial. [Data Collection]. The Lancet Infectious Diseases. https://doi.org/10.1016/S1473-3099(15)00530-7

Nambron, R, Silajdžić, E, Kalliolia, E, Ottolenghi, C, Hindmarsh, P, Hill, NR, Costelloe, SJ, Martin, NG, Positano, V, Watt, HC, Frost, C, Björkqvist, M and Warner, TT (2016). A Metabolic Study of Huntington’s Disease. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0146480.

Phelan, J, Coll, F, Mcnerney, R, Ascher, DB, Pires, DEV, Furnham, N, Coeck, N, Hill-Cawthorne, GA, Nair, MB, Mallard, K, Ramsay, A, Campino, S, Hibberd, M, Pain, A, Rigouts, L and Clark, T (2015). Whole genome sequences for M.tuberculosis isolates from the TDR strain bank. [Data Collection]. European Nucleotide Archive. http://www.ebi.ac.uk/ena/data/view/PRJEB11653

Pakpoor, J, Disanto, G, Altmann, D, Pavitt, S, Turner, BP, Marta, M, Juliusson, G, Baker, D, Chataway, J and Schmierer, K (2015). No evidence for higher risk of cancer in patients with multiple sclerosis taking cladribine: Data supplement. [Data Collection]. Neurology: Neuroimmunology & Neuroinflammation. http://dx.doi.org/10.1212/NXI.0000000000000158

Zoltner, M, Leung, KF, Alsford, S, Horn, D and Field, MC (2015). Modulation of the Surface Proteome through Multiple Ubiquitylation Pathways in African Trypanosomes: Supporting Information. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.16.

Ugarte-Ruiz, M, Stabler, R, Domínguez, L, Domínguez, L, Wren, B, Dorrell, N and Gundogdu, O (2015). Prevalence of Type VI Secretion System in Spanish Campylobacter jejuni Isolates. [Data Collection]. National Center for Biotechnology Information. http://trace.ncbi.nlm.nih.gov/Traces/sra/?study=ERP012241

Cliff, J, Cho, J, Lee, J, Ronacher, K, King, E, van Helden, P, Walzl, G and Dockrell, H (2015). Comparison of M. tuberculosis and M. bovis BCG in diluted whole blood cultures. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-45386/

Cliff, J, Cho, J, Lee, J, Ronacher, K, King, E, van Helden, P, Walzl, G and Dockrell, H (2015). Excessive Cytolytic Responses Predict Tuberculosis Relapse After Apparently Successful Treatment. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-67589/

Seward, N, Prost, A, Copas, A, Corbin, M, Li, L, Colbourn, T, Osrin, D, Neuman, M, Azad, K, Kuddus, A, Nair, N, Tripathy, P, Manandhar, D, Costello, A and Cortina-Borja, M (2015). Using Observational Data to Estimate the Effect of Hand Washing and Clean Delivery Kit Use by Birth Attendants on Maternal Deaths after Home Deliveries in Rural Bangladesh, India and Nepal. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0136152

De Maio, N, Wu, C, O'Reilly, KM and Wilson, D (2015). New Routes to Phylogeography: A Bayesian Structured Coalescent Approximation. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pgen.1005421.s002

Silver, M, Corbin, KD, Hellenthal, G, da Costa, K, Dominguez-salas, P, Moore, S, Owen, J, Prentice, A, Hennig, B and Zeisel, SH (2015). Evidence for negative selection of gene variants that increase dependence on dietary choline in a Gambian cohort: Supplemental Data. [Data Collection]. The FASEB Journal. https://doi.org/10.1096/fj.15-271056.

Lazzarino, A, Hamer, M, Carvalho, L, Gaze, D, Collinson, P and Steptoe, A (2015). The mediation of coronary calcification in the association between risk scores and cardiac troponin T elevation in healthy adults: Is atherosclerosis a good prognostic precursor of coronary disease? [Data Collection]. Preventive Medicine. https://doi.org/10.1016/j.ypmed.2015.05.025.

Hernandez-Vargas, H and Silver, M (2015). DNA methylome analysis in infants from The Gambia / Aflatoxin / Seasonality study. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE59592

Fernández-Grandon, GM, Gezan, SA, Armour, JAL, Pickett, JA and Logan, J (2015). Heritability of Attractiveness to Mosquitoes. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0122716.s001.

Phelan, J, Maitra, A, Mcnerney, R, Nair, M, Gupta, A, Coll, F, Pain, A, Bhakta, S and Clark, TG (2015). Data for: "The draft genome of Mycobacterium aurum, a potential model organism for investigating drugs against Mycobacterium tuberculosis and Mycobacterium leprae". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. http://pathogenseq.lshtm.ac.uk/m_aurum/

Chidambaram, JD, Bauer, J, Holland, M, Burton, M, Prajna, NV, Srikanthi, P, Lalitha, P, Elakkiya, S and Lanjewar, S (2014). Transcriptome data for bacterial and fungal keratitis compared to cadaver cornea. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-58291/

Chidambaram, JD, Bauer, J, Holland, M, Burton, M, Prajna, NV, Srikanthi, P, Lalitha, P, Elakkiya, S and Lanjewar, S (2014). Transcriptome data for bacterial and fungal keratitis compared to cadaver cornea. [Data Collection]. ArrayExpress, London, United Kingdom. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-58291/

Fletcher, HA, Filali-Mouhim, A, Nemes, E, Hawkridge, A, Keyser, A, Njikan, S, Hatherill, M, Scriba, TJ, Abel, B, Kagina, BM, Veldsman, A, Agudelo, NM, Kaplan, G, Hussey, GD, Sekaly, R and Hanekom, WA (2014). PBMC expression profiles of BCG vaccine protected infants and of BCG vaccinated infants who develop tuberculosis disease. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE20716

Giraud, E, Rogers, M, Bates, P and Dillon, R (2014). Transcript abundance comparison between BALB/c ears inoculated with Leishmania mexicana and Leishmania mexicana plus promastigote secretory gel (PSG). [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-52101/

Joshua, G (2014). Transcription profiling by array of Caenorhabditis elegans with biofilm compared to without biofilm. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2981/

Pumirat, P, Cuccui, J, Stabler, R, Stevens, JM, Muangsombut, V, Singsuksawat, E, Stevens, MP, Wren, B and Korbsrisate, S (2014). Transcription profiling of Burkholderia pseudomallei under salt stress and the effect on a type III secretion system. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2302/

Zelmer, A, Martin, M, Gundogdu, O, Birchenough, G, Lever, R, Wren, B, Luzio, JP and Taylor, PW (2014). Transcription profiling of brain, liver and spleen from rats infected with Escherichia coli K1 and treated with capsule-selective endosialidase E. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2406/

Forbes, H, Bhaskaran, K, Thomas, SL, Smeeth, L, Clayton, T and Langan, S (2014). Therapy code list - Other immunosuppressive therapies codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.150.

Jombart, T, Cori, A, Didelot, X, Cauchemez, S, Fraser, C and Ferguson, N (2014). Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1003457

Coll, F, Mcnerney, R, Guerra-Assunção, JA, Glynn, JR, Perdigão, J, Viveiros, M, Portugal, I, Pain, A, Martin, N and Clark, TG (2014). Data for: "A robust SNP barcode for typing Mycobacterium tuberculosis complex strains". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. http://pathogenseq.lshtm.ac.uk/downloads/Coll2014_LinSpeSNPs_final.csv

Geary, TG, Ingram-Sieber, K, Cowan, N, Panic, G, Vargas, M, Mansour, N, Bickle, Q, Wells, TNC, Spangenberg, T and Keiser, J (2014). Orally Active Antischistosomal Early Leads Identified from the Open Access Malaria Box. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pntd.0002610.

Bronowski, C, Fookes, MC, Gilderthorp, R, Ashelford, KE, Harris, SR, Phiri, A, Hall, N, Gordon, MA, Wain, J, Hart, CA, Wigley, P, Thomson, NR and Winstanley, C (2013). Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0002557

Derrick, T, Roberts, Ch, Rajasekhar, M, Burr, SE, Joof, H, Makalo, P, Bailey, RL, Mabey, DCW, Burton, MJ and Holland, MJ (2013). Conjunctival miRNA expression data in scarring and inflammatory trachoma. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE37717

Athrey, G, Hodges, TK, Reddy, MR, Overgaard, H, Matias, A, Ridl, FC, Kleinschmidt, I, Caccone, A and Slotman, MA (2013). Data from: Effective population size of malaria mosquitoes: large impact of vector control. [Data Collection]. Dryad digital repository. https://doi.org/10.5061/dryad.1rf75.

Cliff, J, Lee, J, Constantinou, N, Cho, J, Clark, TG, Ronacher, K, King, EC, Lukey, PT, Duncan, K, Van Helden, PD, Walzl, G and Dockrell, HM (2012). Tuberculosis Patients Blood Gene Expression Through Treatment. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-31348/

Cliff, J, Lee, J, Constantinou, N, Cho, J, Clark, TG, Ronacher, K, King, EC, Lukey, PT, Duncan, K, Van Helden, PD, Walzl, G and Dockrell, HM (2012). Tuberculosis Patients Blood Gene Expression Through Treatment (cured and end-of-treatment patients). [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-36238/

Okumu, F (2012). Combining insecticide treated bed nets and indoor residual spraying for malaria vector control in Africa. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.39.

Smith, R (2011). An experimental investigation of social preferences, their determinants and their role in the labour supply function. [Data Collection]. UK Data Service, Essex, United Kingdom. http://dx.doi.org/10.5255/UKDA-SN-850566

Arnvig, KB, Comas, I, Thomson, NR, Houghton, J, Boshoff, HI, Croucher, NJ, Rose, G, Perkins, TT, Parkhill, J, Dougan, G and Young, DB (2011). Sequence-Based Analysis Uncovers an Abundance of Non-Coding RNA in the Total Transcriptome of Mycobacterium tuberculosis. [Data Collection]. Figshare. https://doi.org/10.1371/journal.ppat.1002342

Burton, MJ, Hu, V, Bauer, J, Mabey, D, Holland, MJ and Bailey, RL (2011). The conjunctival transcriptome in scarring trachoma for Tanzanians. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE24383

Lorenz, L and Koella, JC (2011). Data from: The microsporidian parasite Vavraia culicis as a potential late life-acting control agent of malaria. [Data Collection]. Dryad digital repository. https://doi.org/10.5061/dryad.2s231.

Holland, MJ, Natividad, A, Mabey, D, Jeffries, D, Burton, MJ and Bailey, RL (2011). Expression data from Gambian children with and without the clinical signs of active trachoma: HG-focus array. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20430/

Holland, MJ, Natividad, A, Mabey, DC, Jeffries, D, Burton, MJ, Bailey, RL and Freeman, TC (2011). Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-20436/

Bowyer, P, Simon, GM, Cravatt, BF and Bogyo, M (2010). Global Profiling of Proteolysis during Rupture of Plasmodium falciparum from the Host Erythrocyte. [Data Collection]. Molecular & Cellular Proteomics. https://doi.org/10.1074/mcp.M110.001636.

Natividad, A, Freeman, TC, Jeffries, D, Burton, MJ, Mabey, DCW, Bailey, RL and Holland, MJ (2010). Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE20436

Holt, KE, Parkhill, J, Mazzoni, CJ, Roumagnac, P, Weill, F, Goodhead, I, Rance, R, Baker, S, Maskell, DJ, Wain, J, Dolecek, C, Achtman, M and Dougan, G (2008). High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. [Data Collection]. Nature Genetics. https://doi.org/10.1038/ng.195.

Vernikos, GS, Thomson, NR and Parkhill, J (2007). Genetic flux over time in the Salmonella lineage. [Data Collection]. Genome Biology. https://doi.org/10.1186/gb-2007-8-6-r100

This list was generated on Wed Aug 21 02:15:52 2019 BST.