A

Adeyemi, OO, Ndodo, ND, Sulaiman, MK, Ayansola, OT, Buhari, OIN, Akanbi, OA, Bolarinwa, OA, Chukwu, C, Joel, IY, Omoare, AA, Wahab, KW, Obiekea, C, Buhari, MO, Ahumibe, A, Kolawole, CF, Okoi, C, Omotesho, OB, Mba, N, Adeniyi, O, Babatunde, O, Akintunde, N, Ayinla, G, Akande, OW, Odunola, RA, Saka, MJ, Musa, OI, Durotoye, IA, Ihekweazu, C, Adetifa, IM and Fadeyi, A (2023). SARS-CoV-2 variants-associated outbreaks of COVID-19 in a tertiary institution, North-Central Nigeria: Implications for epidemic control. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0280756.s003

Aiken, A and Rehman, AM (2023). MBIRA - Mortality from Bacterial Infections Resistant to Antibiotics study - underlying data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003168.

Al-haboubi, M, Exley, J, Allel, K, Erens, B and Mays, N (2023). One year of digital contact tracing: Who was more likely to install the NHS COVID-19 app? Results from a tracker survey in England and Wales. [Data Collection]. SAGE Journals. https://doi.org/10.25384/SAGE.c.6449597.v1

Ambia, J, Slaymaker, E, Khagayi, S, Kwaro, D and Reniers, G (2023). Data for: Antenatal versus general population HIV prevalence in Siaya, Western Kenya. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003316.

Andrade, LR, Santana, Mônica Leila Portela de, Costa, PRF, Assis, AMO and Kinra, S (2023). Body image is associated with anthropometric status in adolescents, but not with lifestyle. [Data Collection]. SciELO journals. https://doi.org/10.6084/m9.figshare.21835206.v1

Ashall, J, Shah, S, Biggs, JR, Chang, JR, Jafari, Y, Brady, OJ, Mai, HK, Lien, LT, Do Thai, H, Nguyen, HAT, Anh, DD, Iwasaki, C, Kitamura, N, Van Loock, M, Herrera-Taracena, G, Rasschaert, F, Van Wesenbeeck, L, Yoshida, L, Hafalla, JCR, Hue, S and Hibberd, ML (2023). Dengue virus type 4 isolate DET-P-0428-1 polyprotein (POLY) gene, complete cds; and sfRNA2 lncRNA gene, partial sequence. [Data Collection]. National Center for Biotechnology Information. https://www.ncbi.nlm.nih.gov/nuccore/OQ427062

Ashall, J, Shah, S, Biggs, JR, Chang, JR, Jafari, Y, Brady, OJ, Mai, HK, Lien, LT, Do Thai, H, Nguyen, HAT, Anh, DD, Iwasaki, C, Kitamura, N, Van Loock, M, Herrera-Taracena, G, Rasschaert, F, Van Wesenbeeck, L, Yoshida, L, Hafalla, JCR, Hue, S and Hibberd, ML (2023). Dengue virus type I isolate DEN-P-1098-1 polyprotein (POLY) gene, partial cds. [Data Collection]. National Center for Biotechnology Information. https://www.ncbi.nlm.nih.gov/nuccore/OQ426566.1/

B

Bhaskaran, K (2023). Clinical codelist - Smoking - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003472.

Bhaskaran, K (2023). Clinical codelist - Smoking - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003473.

Bhaskaran, K and Carreira, H (2023). Clinical codelist - cancer - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003427.

Brown, J, Wing, K and Douglas, IJ (2023). Clinical covariate codelist - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003265.

Brown, J, Wing, K and Douglas, IJ (2023). Clinical covariate codelist - GOLD. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003266.

Brown, J, Wing, K and Douglas, IJ (2023). Codelists for: "Association between fluoroquinolones and hospitalization with aortic aneurysm or aortic dissection". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003243.

Brown, J, Wing, K and Douglas, IJ (2023). ICD codelist for aortic aneurysm or aortic dissection. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003267.

Brown, J, Wing, K and Douglas, IJ (2023). Therapy codelists for antibiotics and corticosteroids - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003263.

Brown, J, Wing, K and Douglas, IJ (2023). Therapy codelists for antibiotics and corticosteroids - GOLD. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003264.

Buzabi, E and Carreira, H (2023). Clinical codelist - Osteoporosis - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003465.

Buzabi, E and Carreira, H (2023). Clinical codelist - Osteoporosis - Gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003464.

Buzabi, E and Carreira, H (2023). Clinical codelist - any fracture - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003447.

Buzabi, E and Carreira, H (2023). Clinical codelist - any fracture - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003445.

Buzabi, E and Carreira, H (2023). Clinical codelist - any fracture - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003446.

Buzabi, E and Carreira, H (2023). Clinical codelist - hip fractures - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003440.

Buzabi, E and Carreira, H (2023). Clinical codelist - hip fractures - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003448.

Buzabi, E and Carreira, H (2023). Clinical codelist - pelvic fracture - Gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003466.

Buzabi, E and Carreira, H (2023). Clinical codelist - pelvic fractures - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003441.

Buzabi, E and Carreira, H (2023). Clinical codelist - proximal humeral fractures - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003442.

Buzabi, E and Carreira, H (2023). Clinical codelist - proximal humerus fracture - Gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003468.

Buzabi, E and Carreira, H (2023). Clinical codelist - spinal fractures - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003443.

Buzabi, E and Carreira, H (2023). Clinical codelist - spine fracture - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003474.

Buzabi, E and Carreira, H (2023). Clinical codelist - wrist fracture - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003475.

Buzabi, E and Carreira, H (2023). Clinical codelist - wrist fractures - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003444.

Buzabi, E and Carreira, H (2023). Therapy codelist - Bisphosphanates - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003423.

Buzabi, E and Carreira, H (2023). Therapy codelist - Bisphosphanates - Gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003424.

Buzabi, E and Carreira, H (2023). Therapy codelist - hormone replacement therapy - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003449.

Buzabi, E and Carreira, H (2023). Therapy codelist - hormone replacement therapy - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003450.

Buzabi, E, Carreira, H, Funston, G, Mansfield, KE, Forbes, H, Strongman, H and Bhaskaran, K (2023). Codelists for: "Risk of fractures in half a million survivors of 20 cancers: a population-based matched cohort study using linked UK electronic health records". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003415.

C

Campbell, J (2023). Codelists for: "Covid-19 during pregnancy and risk of miscarriage or stillbirth: A matched cohort study using English electronic health data". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003323.

Carreira, H (2023). Clinical codelist - Alcohol - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003422.

Carreira, H and Strongman, H (2023). Clinical codelist - Alcohol - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003421.

Carter, N, Webb, E, Lebina, L, Motsomi, K, Bosch, Z, Martinson, N and MacPherson, P (2023). Data supporting "Prevalence of subclinical pulmonary tuberculosis and its association with HIV in household contacts of tuberculosis in two South African provinces: analysis of a cluster-randomised trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003373.

Chapman, LA, Aubry, M, Maset, N, Russell, T, Knock, ES, Lees, JA, Mallet, H, Cao-Lormeau, V and Kucharski, AJ (2023). Impact of vaccinations, boosters and lockdowns on COVID-19 waves in French Polynesia. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7790839

Chatterjee, S, Das, P, Shikhule, A, Munje, R and Vassall, A (2023). Journey of the tuberculosis patients in India from onset of symptom till one-year post-treatment. Complete dataset. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001564.s009

Choko, A and Corbett, EL (2023). Baseline data for the fishermen’s schistosomiasis and HIV services (FISH) cluster randomized trial in Mangochi, Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003363.

Clifford, S and Hackman, J (2023). Effectiveness of BNT162b2 and ChAdOx1 against SARS-CoV-2 household transmission. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7618847

D

Davidson, J (2023). Clinical codelist - Lupus - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003459.

Davidson, J (2023). Clinical codelist - Lupus - Gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003460.

Davidson, J (2023). Clinical codelist - Lupus - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003461.

Davidson, J (2023). Clinical codelist - chronic kidney disease - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003455.

Davidson, J (2023). Clinical codelist - coeliac - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003432.

Davidson, J (2023). Clinical codelist - coeliac - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Davidson, J (2023). Clinical codelist - coeliac - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003431.

Davidson, J (2023). Clinical codelist - eating disorders - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003434.

Davidson, J (2023). Clinical codelist - eating disorders - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003436.

Davidson, J (2023). Clinical codelist - eating disorders - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003435.

Davidson, J (2023). Clinical codelist - epilepsy - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003437.

Davidson, J (2023). Clinical codelist - epilepsy - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003439.

Davidson, J (2023). Clinical codelist - epilepsy - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003438.

Davidson, J (2023). Clinical codelist - inflammatory bowel disease - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003451.

Davidson, J (2023). Clinical codelist - inflammatory bowel disease - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003454.

Davidson, J (2023). Clinical codelist - inflammatory bowel disease - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003452.

Davidson, J (2023). Clinical codelist - liver disease - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003458.

Davidson, J (2023). Clinical codelist - liver disease - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003456.

Davidson, J (2023). Clinical codelist - liver disease - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003457.

Davidson, J (2023). Clinical codelist - rheumatoid arthritis - HES. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003471.

Davidson, J (2023). Clinical codelist - rheumatoid arthritis - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003469.

Davidson, J (2023). Clinical codelist - rheumatoid arthritis - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003470.

Davidson, J (2023). Therapy codelist - oral corticosteroids - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003462.

Davidson, J (2023). Therapy codelist - oral corticosteroids - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003463.

Deadman, D, Carreira, H and Strongman, H (2023). Clinical codelist - cancer - aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003426.

F

Floyd, S and Schaap, A (2023). Dataset for: "The impact of community-based, peer-led sexual and reproductive health services on knowledge of HIV-status among adolescents and young people aged 15-24 in Lusaka, Zambia: the Yathu Yathu cluster randomized trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003310.

Fombah, AE, Chen, H, Owusu-Kyei, K, Quinto, L, Gonzalez, R, Williams, J, Berne, ML, Wassenaar, M, Jalloh, A, Sunders, J, Ramirez, M, Bertran-Cobo, C, Saute, F, Ekouevi, DK, Briand, V, Kamara, AR, Sesay, T, Samai, M and Menéndez, C (2023). MULTIPLY - Baseline household survey, Sierra Leone. [Data Collection]. CORA.Repositori de Dades de Recerca. https://doi.org/10.34810/data603

Forbes, H and Carreira, H (2023). Clinical codelist - Body Mass Index - Aurum. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003425.

G

García, GA, Janko, M, Hergott, DEB, Donfack, OT, Smith, JM, Mba Eyono, JN, DeBoer, KR, Nguema Avue, RM, Phiri, WP, Aldrich, EM, Schwabe, C, Stabler, TC, Rivas, MR, Cameron, E, Guerra, CA, Cook, J, Kleinschmidt, I and Bradley, J (2023). Additional file 1 of Identifying individual, household and environmental risk factors for malaria infection on Bioko Island to inform interventions. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.22610438.v1

Gasparrini, A (2023). gasparrini/MCC-SO2. [Data Collection]. Github. https://github.com/gasparrini/MCC-SO2

Glynn, JR (2023). Dataset codebook for a 30-year population-based study examining the contribution of remote M.tuberculosis infection to tuberculosis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002829.

H

Hodcroft, E, Zuber, M, Harkins, E, Neher, R, Wagner, C, Bedford, T, Hadfield, J, fzhang12, Sibley, T, Saleh, A, falnaji, Xueying, aniafijarczyk, tomoyuki-nezu, Müller, NF, Brito, A, Gall, A and Villabona Arenas, CJ (2023). emmahodcroft/ncov_2021. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7970772

J

Juel, R (2023). Let’s just ask them. Perspectives on urban dwelling and air quality: a cross-sectional survey of 3,222 children, young people and parents. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.21947432.v1

K

Kakande, A, Ssemata, AS, Muhumuza, R, Atujuna, M, Abaasa, A, Fox, J, Ndekezi, D, Tshabalala, G, Nematadzira, T, Hornschuh, S, Nomvuyo, M, Ahmed, N, Maluadzi, M, Weiss, H, Seeley, J, Dietrich, JJ, Stranix-Chibanda, L, Webb, E, PrEPVacc Study Group and ITAPS team (2023). Data for: PrEP preference among adolescent boys and young men in three sub-Saharan African countries. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003232.

Katumba, K, Tann, CJ, Webb, EL, Tenywa, P, Nampijja, M, Seeley, J and Greco, G (2023). The economic burden incurred by families caring for a young child with developmental disability in Uganda: User costing questionnaire. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0000953.s002

Katumba, K, Tann, C, Webb, E, Tenywa, P, Nampijja, M, Seeley, J and Greco, G (2023). Data supporting "The economic burden incurred by families caring for a young child with developmental disability in Uganda". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003311.

Keddie, SH (2023). shk313/Evaluating-sensitivity-and-specificity-from-LCM-a-simulation-study. [Data Collection]. Github. https://github.com/shk313/Evaluating-sensitivity-and-specificity-from-LCM-a-simulation-study

Khan, B, Hameed, W and Iqbal, B (2023). Training of maternity service providers on supportive and dignified maternity care: pre-post training assessment. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.h44j0zpq5

Khongo, BD, Schmiedeknecht, K, Aron, MB, Nyangulu, PN, Mazengera, W, Ndarama, E, Tenner, AG, Baltzell, K and Connolly, E (2023). BEC Scores data. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5956963

Kirkwood, B, Roy, R, Bhopal, S and Soremekun, S (2023). Datasets for the study “Sustainable Programme Incorporating Nutrition & Games (SPRING): a multi-country-randomised controlled trial”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003124.

Kitonsa, J, Kansiime, S, Kusemererwa, S, Onyango, M, Nayiga, B, Kabarambi, A, Mugisha, J, Kaleebu, P, Ruzagira, E and PrEPVacc Study Group (2023). Data for: Changes in self-reported risky sexual behaviour indicators among adults receiving regular risk reduction counselling and optional initiation of pre-exposure prophylaxis in an HIV vaccine preparedness study in Masaka, Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003403.

Koltai, M (2023). mbkoltai/RSV-CEA-Kenya-South-Africa. [Data Collection]. Github. https://github.com/mbkoltai/RSV-CEA-Kenya-South-Africa

L

LSHTM Electronic Health Records Group (2023). Incident dementia risk among patients with type 2 diabetes receiving metformin versus alternative oral glucose-lowering therapy: an observational cohort study using UK primary healthcare records. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003402.

LSHTM Library & Archives Service (2023). Data Management for interview and focus group resources in health. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/PUBS.04646631

LSHTM Library, Archives & Open Research Services (2023). Data Management for MSc Summer Projects. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001857.

Leclerc, QJ (2023). qleclerc/phage_antibiotic_dynamics. [Data Collection]. Github.

Leung, WTM (2023). wtm-leung/Network-modelling-review: Network modelling review v1.0.0. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7883258

Leung, WTM, Meeyai, A, Holt, HR, Khieu, B, Chhay, T, Seng, S, Pok, S, Chiv, P, Drake, T and Rudge, J (2023). Social contact patterns relevant for infectious disease transmission in Cambodia. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7642647

Liu, Y, Procter, SR, Pearson, CAB, Madriz Montero, A, Torres-Rueda, S, Asfaw, E, Uzochukwu, B, Drake, T, Bergren, E, Eggo, RM, Ruiz, F, Ndembi, N, Nonvignon, J, Jit, M and Vassall, A (2023). yangclaraliu/covid_vac_africa: BMCMed_R3. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7618748

London School of Hygiene & Tropical Medicine (2023). Evaluation of MALDI-TOF MS for molecular typing of Acinetobacter baumannii in comparison with orthogonal methods. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB59585

Lotto Batista, M, Rees, EM, Gómez, A, López, S, Castell, S, Kucharski, AJ, Ghozzi, S, Müller, GV and Lowe, R (2023). Data and R-code to accompany 'Towards an Early Warning System for Leptospirosis in North-Eastern Argentina'. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7865638

M

Mansfield, K (2023). Clinical codelist - Chronic kidney disease - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003429.

Mansfield, K (2023). Clinical codelist - serum creatinine - gold. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003433.

Mansfield, KE, Wong, A and Tomlinson, LA (2023). Sex and the risk of acute reductions in kidney function after renin-angiotensin blockade: parallel analyses of a primary care cohort and two randomised trials. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003242.

Mansfield, KE, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - end stage kidney disease codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003244.

Mansfield, KE, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - end stage kidney disease codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003241.

Mansfield, KE, Wong, A and Tomlinson, LA (2023). Procedure codelist - end stage kidney disease codes (opcs). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003245.

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). BLAST results: S. stercoralis orthologues of the S. ratti E/S proteome. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s003

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). Candidate coproantigen sequences in fasta format. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s006

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). Predicted epitopes in S. stercoralis proteins using BepiPred and bcepred. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s005

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). Protein identity, features and gene expression levels of S. stercoralis orthologues of S. ratti E/S proteomic data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s004

Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA (2023). S. stercoralis genes (n = 328) differentially expressed in gut-dwelling (dark blue) versus non-gut-dwelling (light blue) life stages of the nematode with those containing predicted epitopes indicated. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010777.s002

Masselot, P and Gasparrini, A (2023). Temperature-related mortality exposure-response functions for 854 cities in Europe. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7672107

Mathur, R, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - retinopathy codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003261.

Mathur, R, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - retinopathy codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003260.

Mathur, R, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - retinopathy codes (opcs). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003262.

Mclean, E (2023). Local and long-distance migration among young people in rural Malawi: importance of age, sex and family (author-writter code). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7797356

Minassian, C, Allen, LA, Okosieme, O, Vaidya, B and Taylor, P (2023). Supplementary material for: "Preconception management of hyperthyroidism and thyroid status in subsequent pregnancy: a population-based cohort study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003365.

Mujumbusi, L, Nalwadda, E, Ssali, A, Pickering, L, Seeley, J, Meginnis, K and Lamberton, PHL (2023). Raw data extracted and anonymised data after coding. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010687.s001

Mulla, S, Ludlam, AR, Elragig, A, Slack, C, Balklava, Z, Stich, M and Cheong, A (2023). Supplementary material from "A biphasic model of lifespan in nematode Caenorhabditis elegans worm". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.6403443.v2

Murphy, A, Palafox, B, Chifamba, J, Kruger, IM, Ncube, BJ, Ncube, TL, Rangarajan, S, Swart, EC, Tsolkile, L, Walli-Attaei, M, West, NJ, Yeates, KE, Yusuf, S, Mckee, M and Hanson, K (2023). Comparing estimates of household expenditures between pictorial diaries and surveys in three low- and middle-income countries. Example pictorial diary tool used in Tanzania. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001739.s004

Murphy, A, Palafox, B, Chifamba, J, Kruger, IM, Ncube, BJ, Ncube, TL, Rangarajan, S, Swart, EC, Tsolkile, L, Walli-Attaei, M, West, NJ, Yeates, KE, Yusuf, S, Mckee, M and Hanson, K (2023). Comparing estimates of household expenditures between pictorial diaries and surveys in three low- and middle-income countries: PURE health expenditure questionnaire. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001739.s003

Mweemba, A, Kelly, P, Heimburger, DC, Mutale, W, Nzala, S, Wester, WC, Banda, J, Mulenga, LB, Siwingwa, M and Todd, J (2023). Effect of anti-retroviral regimen on proximal tubular function in Zambian adolescents and young adults living with HIV. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.22044047.v1

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Ogbulafor, N, Uhomoibhi, P, Shekarau, E, Nikau, J, Okoronkwo, C, Fanou, NML, Mbaye, IM, Ndiaye, J, Tchouatieu, A, Poku-Awuku, A, Merle, C, Scott, S, Milligan, P, Ali, A, Yusuf, HE, Oguche, S and Dahiru, T (2023). Additional file 1 of Facilitators and barriers to seasonal malaria chemoprevention (SMC) uptake in Nigeria: a qualitative approach. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.22617988.v1

Otiende, M, Nyaguara, A, Bottomley, C, Walumbe, D, Mochamah, G, Amadi, D, Nyundo, C, Kagucia, E, Etyang, A, Adetifa, I, Brand, S, Maitha, E, Chondo, E, Nzomo, E, Aman, R, Mwangangi, M, Amoth, P, Kasera, K, Ng'ang'a, W, Barasa, E, Tsofa, B, Mwangangi, J, Bejon, P, Agweyu, A, Williams, TN and Scott, JAG (2023). Replication Data for: Impact of COVID-19 on mortality in coastal Kenya: a longitudinal open cohort study. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/HAGRAK

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Pavlich-Mariscal, J, Eggo, RM, Kucharski, AJ, Gruson, H, Russell, TW, Valle Campos, A, Cucunubá, ZM, Santos-Vega, M, Gupte, P, Azam, J, Torres Domínguez, N, Lambert, J, Gomez, G, Umaña, JD, Quevedo-Vega, DS, Gámez López, ME and Carnegie, A (2023). epiverse-trace. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://github.com/epiverse-trace

Phelan, J (2023). jodyphelan/host-pathogen. [Data Collection]. Github. https://github.com/jodyphelan/host-pathogen

Phelan, JE and Menzel, P (2023). jodyphelan/tbdb. [Data Collection]. Github. https://github.com/jodyphelan/tbdb

Phelan, J, yujun2017, Meuli, M, Cudahy, PGT, Menzel, P and Horan, K (2023). jodyphelan/TBProfiler. [Data Collection]. Github. https://github.com/jodyphelan/TBProfiler/

Pietersen, E, Anderson, K, Cox, H, Dheda, K, Bian, A, Shepherd, BE, Sterling, TR, Warren, RM and van der Heijden, YF (2023). Data for: "Variation in missed doses and reasons for discontinuation of anti-tuberculosis drugs during hospital treatment for drug-resistant tuberculosis in South Africa". [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0281097.s001

Pillai, AN, Hladish, T, Pearson, CAB, Toh, B, Noah4944 and Stoltzfus, A (2023). tjhladish/covid-abm: Active Vaccination Experiment 2023-02-02. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7601663

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Pry, J, Simbeza, S, Geng, E, Mutale, J, Sikombe, K, Jere, L, Bukankala, C and Beres, L (2023). Depression among healthcare workers in Lusaka, Zambia during the COVID-19 pandemic. [Data Collection]. Dryad. https://doi.org/10.25338/B8S646

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Pung, R, Clapham, HE, Russell, TW, Lee, VJ and Kucharski, AJ (2023). Relative role of border restrictions, case finding and contact tracing in controlling SARS-CoV-2 in the presence of undetected transmission: a mathematical modelling study. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7538040

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Raghavan, M, Kalantar, K, Duarte, E, Teyssier, N, Takahashi, S, Kung, A, Rajan, JU, Rek, J, Tetteh, KKA, Drakeley, C, Ssewanyana, I, Rodriguez-Barraquer, I, Greenhouse, B and DeRisi, J (2023). Proteome-wide antigenic profiling in Ugandan cohorts identifies associations between age, exposure intensity, and responses to repeat-containing antigens in Plasmodium falciparum. [Data Collection]. Dryad. https://doi.org/10.7272/Q69S1P9G

Ramke, J, Silva, JC, Gichangi, M, Ravilla, T, Burn, H, Buchan, JC, Welch, V, Gilbert, CE and Burton, MJ (2023). Round 2 responses from panellists. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0000631.s005

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Saleh, M and Howard, N (2023). Interview transcripts for: "Socio-political and organizational influences on national infectious disease surveillance for refugees: A qualitative case study in Lebanon". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003321.

Sharma waddington, H, Masset, E, Bick, S and Cairncross, S (2023). Data for: "Impact on childhood mortality of interventions to improve drinking water, sanitation, and hygiene (WASH) to households: Systematic review and meta-analysis". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003398.

Sharma, E (2023). Online questionnaire results for Serbian perspectives on Afghan refugee women’s maternity experiences in Serbia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003389.

Sinnott, SJ, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - arrhythmia codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003251.

Sinnott, SJ, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - arrhythmia codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003250.

Sinnott, SJ, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - diabetes codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003253.

Sinnott, SJ, Wong, A and Tomlinson, LA (2023). Diagnosis codelist - diabetes codes (opcs). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003252.

Soremekun, C, Machipisa, T, Soremekun, O, Pirie, F, Oyekanmi, N, Motala, AA, Chikowore, T and Fatumo, S (2023). Multivariate GWAS analysis reveals loci associated with liver functions in continental African populations. S1 File. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0280344.s001

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Tashiro, M, Sato, S and Endo, A (2023). Decreased community-acquired pneumonia coincided with rising awareness of precautions before governmental containment policy in Japan. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7891634

Tawaraishi, T, Ochida, A, Akao, Y, Itono, S, Kamaura, M, Akther, T, Shimada, M, Canan, S, Chowdhury, S, Cao, Y, Condroski, K, Engkvist, O, Francisco, A, Ghosh, S, Kaki, R, Kelly, JM, Kimura, C, Kogej, T, Nagaoka, K, Naito, A, Pairaudeau, G, Radu, C, Roberts, I, Shum, D, Watanabe, N, Xie, H, Yonezawa, S, Yoshida, O, Yoshida, R, Mowbray, C and Perry, B (2023). Collaborative Virtual Screening Identifies a 2‑Aryl-4-aminoquinazoline Series with Efficacy in an In Vivo Model of Trypanosoma cruzi Infection. [Data Collection]. ACS Publications. https://doi.org/10.1021/acs.jmedchem.2c00775.s002

Thindwa, D and Clifford, S (2023). deusthindwa/ optimal.age.targeting.pneumo.vaccines: OptionaAgeTargetingPneumococcalVaccines. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7592904

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Tomlinson, LA and Wong, A (2023). Diagnosis codelist - heart failure codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003248.

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University of Glasgow, MRC/CSO Social and Public Health Sciences, University College London and London School of Hygiene and Tropical Medicine (2023). National Survey of Sexual Attitudes and Lifestyles COVID-19 Study, 2020-2021. [Data Collection]. UK Data Service. http://doi.org/10.5255/UKDA-SN-8865-2

Unwin, J, Challenger, J, Watson, OJ, Hellewell, J, FitzJohn, R and Sherrard-Smith, E (2023). mrc-ide/deterministic-malaria-model: nets_paper. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7559615

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Wong, A and Tomlinson, LA (2023). Diagnosis codelist - ischaemic heart disease codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003257.

Wong, A and Tomlinson, LA (2023). Diagnosis codelist - ischaemic heart disease codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003256.

Wong, A and Tomlinson, LA (2023). Diagnosis codelist - myocardial infarction codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003247.

Wong, A and Tomlinson, LA (2023). Diagnosis codelist - myocardial infarction codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003246.

Wong, A and Tomlinson, LA (2023). Diagnosis codelist - peripheral arterial disease codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003259.

Wong, A and Tomlinson, LA (2023). Diagnosis codelist - peripheral arterial disease codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003258.

Wong, A and Tomlinson, LA (2023). Diagnosis codelist - stroke/transient ischaemic attack codes (icd-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003255.

Wong, A and Tomlinson, LA (2023). Diagnosis codelist - stroke/transient ischaemic attack codes (medcodes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003254.

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Yang, M, Daftary, A, Mendelsohn, JB, Ryan, M, Bullock, S, Bisaillon, L, Bourne, A, Lebouché, B, Thompson, T and Calzavara, L (2023). Appendix: Positive plus one study interview guides. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0281301.

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Zishiri, V, Conserve, DF, Haile, ZT, Corbett, EL, Hatzold, K, Meyer-Rath, G, Matsimela, K, Sande, L, D'elbee, M, Terris-Prestholt, F, Johnson, CC, Chidarikire, T, Venter, F and Majam, M (2023). Additional file 1 of Secondary distribution of HIV self-test kits by HIV index and antenatal care clients: implementation and costing results from the STAR Initiative in South Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.23281113.v1

Zishiri, V, Conserve, DF, Haile, ZT, Corbett, EL, Hatzold, K, Meyer-Rath, G, Matsimela, K, Sande, L, d'Elbee, M, Terris-Prestholt, F, Johnson, CC, Chidarikire, T, Venter, F and Majam, M (2023). Additional file 2 of Secondary distribution of HIV self-test kits by HIV index and antenatal care clients: implementation and costing results from the STAR Initiative in South Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.23281116.v1