Project

Newbould, R, Juel, R, Dasaraju, A, Whitmee, S and Hughes, R (2024). Evidence Collections for Climate and Health - map and reports. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004366.

Calderwood, C (2024). Multimorbidity in tuberculosis-affected households: evaluation of disease clustering and the acceptability and yield of integrated health screening in East and Southern Africa (IMBA Hutano). [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004267.

Weiss, H, Nelson, K, Mugenyi, L, Batuusa, L, Thomas, K and Baleke, C (2024). MENISCUS Trial. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003822.

Boggs, D, Birabwa, A, Adkins, S, Atijosan-Ayodele, O, Bulathwela, S, de Cates, C, Doggett, T, Foster, A, Kuper, H, Holloway, C, Mugisha, J, Polack, S and FNAT team (2024). Functional Needs Assessment Tool (FNAT) Supplementary Materials. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003863.

Mtuy, T (2024). Studies of microbial keratitis treatment, prevention and diagnosis in Nepal and East Africa. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003813.

Foster, N (2024). ASCENT-Ethiopia health economics. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003721.

Data Collection

Thomson, EC (2024). ecthomson/AFI. [Data Collection]. Github. https://github.com/ecthomson/AFI/

Sivakumaran, P, de Barros, B, Antonio Dias, VL, Lockwood, DN and Walker, SL (2024). Clinical data on 29 patients with leprosy. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012699.s003

Falconer, J, Ruiz, F and Madriz Montero, A (2024). Search strategies for "Interventions to negate aggravated diarrheal disease due to climate change - A scoping review". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004464.

Scurlock, M, Stiens, J, Passmore, IJ, Nobeli, I and Kendall, S (2024). TnSEQ analysis measuring fitness costs of insertions in the M. bovis AF2122/97 genome during survival in extra-pulmonary lymph nodes. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.14230080

Negash, M, Tadesse, Z, Ambaw, F, Beka, M, Belete, T, Abte, M, Deribe, K, Eaton, J, Byrd, E, Callahan, EK, Addiss, D, van Brakel, WH, Fekadu, A, Macleod, D, Burton, MJ and Habtamu, E (2024). West Gojam Zone 2022 population data by district and setting. [Data Collection]. PLOS Mental Health. https://doi.org/10.1371/journal.pmen.0000191.s001

Falconer, J, Hartman, E, Zimmerman, C, Kiss, L, Ranganathan, M and Smith, C (2024). Addressing Child Labor: Are Interventions to Prevent and Respond to Child Labor Working? Protocol draft search strategy. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004454.

Stiens, J, Passmore, IJ, Nobeli, I and Kendall, S (2024). TnSEQ analysis measuring fitness costs of insertions in the M. bovis AF2122/97 genome under oxidative stress. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.14223487

Kansiime, S, Holm Hansen, C, Ruzagira, E, McCormack, S, Hayes, R, Dunn, D and PrEPVacc study team (2024). Data set for: Challenges in estimating the counterfactual placebo HIV incidence rate from a registration cohort: the PrEPVacc trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004435.

Tumwesige, E, Kawuma, R, Asiimwe, A, Nabimanya, P, Nakate, S, Bernays, S and Seeley, J (2024). “She held my hand and advised me”: Young migrants’ experiences of individual peer support to access health and social services in two small towns in southwestern Uganda. Thematic table. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0003713.s002

Simpson, H, Agyabeng, K, Alomatu, B, Asemanyi-Mensah, K, Mensah, E, Atinbire, S, Edmiston, M, Opare, J and Pullan, RL (2024). Replication Data for: Validation of routine lymphatic filariasis morbidity surveillance in the Upper West Region, Ghana. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/J6LFTR

Jones, R (2024). Data for: "The effectiveness of putative wearable repellent technologies to protect against mosquito biting and Aedes-borne diseases, and their economic impact". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004432.

Osei, I (2024). Gambia_Main Contact Survey. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.14064155

Kazungu, J, Nonvignon, J, Barasa, E and Quaife, M (2024). NHIF-contracted outpatient facility choice data. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/V16VK4

Jamaluddine, Z and Checchi, F (2024). ZeinaJamaluddine/gaza_mortality_capture_recapture. [Data Collection]. Github. https://github.com/ZeinaJamaluddine/gaza_mortality_capture_recapture

MacPherson, P, Stagg, HR, Schwalb, A, Henderson, H, Taylor, AE, Burke, RM, Rickman, HM, Miller, C, Houben, Rein M. G. J., Dodd, PJ and Corbett, EL (2024). Summary of posterior draws from pulmonary tuberculosis model. [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1004448.s002

Davies, K (2024). Data for: "Understanding end-user preferences for hand hygiene enabling technologies: a mixed-methods study in peri-urban Lusaka". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004413.

Buller, AM, Wamoyi, J, Gourlay, AJ, Pichon, M, Tilouche, N, Abramsky, T, Zuakulu, M and Mangya, C (2024). LINEA baseline cohort survey data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004403.

Buller, AM, Wamoyi, J, Gourlay, AJ, Pichon, M, Tilouche, N, Abramsky, T, Zuakulu, M and Mangya, C (2024). LINEA baseline cross-sectional survey data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004404.

Weiss, H, Nelson, K, Thomas, K, Mugenyi, L, Batuusa, R and Baleke, C (2024). MENISCUS Trial diary data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004410.

Masselot, P, Mistry, MN and Gasparrini, A (2024). Projection of temperature-related mortality in 854 European cities under climate change and adaptation scenarios. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.14004321

Falconer, J and Murage, P (2024). Search strategies for "Impact of tree-based interventions in addressing health and wellbeing outcomes in rural low-and-middle income settings: a systematic review and meta-analysis". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004405.

Gasparrini, A and Vanoli, J (2024). Synthetic datasets of the UK Biobank cohort. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.13983169

Falconer, J and Brunn, A (2024). Search strategies for "A Scoping Review of the Influence of Environmental Exposures on Health Outcomes in Kenya". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004364.

Fu, G, Huon, C, Marley, G, Tan, RKJ, Wu, D, Sheng, Q, Liu, Y, Byrne, ME, Tang, Q, Mu, R, Wang, C, Yang, L, Wang, T, Tang, W and Tucker, JD (2024). S1 Dataset for "Sociodemographic characteristics, community engagement and stigma among Men who have Sex with Men (MSM) who attend MSM-led versus public sexual health clinics: A cross-sectional survey in China". [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0310957.s003

Ruysen, H, Majid, T, Shamba, D, Mhajabin, S, Minja, J, Rahman, AE, Ngopi, T, Ramesh, M, Arifeen, SE, Steege, R, Seeley, J, Lawn, JE, Day, LT and EN-BIRTH 2, SG (2024). Data for: "How and why does mode of birth affect processes for routine data collection and use? A qualitative study in Bangladesh and Tanzania.". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004357.

Garcia, KKS, Laporta, GZ, Soremekun, S, Bottomley, C, Abrahão, AA, Moresco, GG, Drakeley, C, Costa, AdP and Siqueira, AM (2024). Data repository for "Brazil towards malaria elimination: A time-series analysis of imported cases from 2007 to 2022". [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0003822.s001

Kiragga, A, Todd, J, Kajungu, D, Wamukoya, M, Crampin, AC and Urassa, M (2024). Exploring Climate and Health Pathways in the INSPIRE Network. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/DHDNIC

Tchatchouang, S, Basing, LA, Kouadio-Aboh, H, Handley, BL, G-Beiras, C, Amanor, I, Ndzomo, P, Bakheit, M, Becherer, L, Knauf, S, Müller, C, Njih-Tabah, E, Njamnshi, T, Crucitti, T, Borst, N, Lüert, S, Frischmann, S, Gmoser, H, Landmann, E, Sylla, A, Kouamé-Sina, MS, Arhinful, D, Awondo, P, Menguena, G, Harding-Esch, E, Tano, A, Kaloga, M, Koffi-Aboa, P, Konama-Kotey, N, Mitjà, O, Eyangoh, S, Kwasi-Addo, K, Ngazoa-Kakou, S and Marks, M (2024). Cameroon data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011790.s002

Tchatchouang, S, Basing, LA, Kouadio-Aboh, H, Handley, BL, G-Beiras, C, Amanor, I, Ndzomo, P, Bakheit, M, Becherer, L, Knauf, S, Müller, C, Njih-Tabah, E, Njamnshi, T, Crucitti, T, Borst, N, Lüert, S, Frischmann, S, Gmoser, H, Landmann, E, Sylla, A, Kouamé-Sina, MS, Arhinful, D, Awondo, P, Menguena, G, Harding-esch, E, Tano, A, Kaloga, M, Koffi-Aboa, P, Konama-Kotey, N, Mitjà, O, Eyangoh, S, Kwasi-Addo, K, Ngazoa-Kakou, S and Marks, M (2024). Côte d’Ivoire data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011790.s003

Tchatchouang, S, Basing, LA, Kouadio-Aboh, H, Handley, BL, G-Beiras, C, Amanor, I, Ndzomo, P, Bakheit, M, Becherer, L, Knauf, S, Müller, C, Njih-Tabah, E, Njamnshi, T, Crucitti, T, Borst, N, Lüert, S, Frischmann, S, Gmoser, H, Landmann, E, Sylla, A, Kouamé-Sina, MS, Arhinful, D, Awondo, P, Menguena, G, Harding-Esch, EM, Tano, A, Kaloga, M, Koffi-Aboa, P, Konama-Kotey, N, Mitjà, O, Eyangoh, S, Kwasi-Addo, K, Ngazoa-Kakou, S and Marks, M (2024). Ghana data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011790.s004

Lau, K (2024). Data file for Are migrant workers at greater risk of workplace deaths? A systematic review and meta-analysis of mortality risks and social determinants among migrant workers. [Data Collection]. St George's, University of London, London, United Kingdom. https://doi.org/10.24376/rd.sgul.26939833.v2

Simpson, H, Trueba, M, Mendizábal-Cabrera, R, George, S, Tomy, C, Sasi, ST, Kartal, A, Deribe, K, Panicker, KNP and Davey, G (2024). Replication Data for: Confirming non-endemicity of podoconiosis in Guatemala and in Idukki District in Kerala (India): a comparison of two approaches potentially suitable for other neglected tropical diseases. [Data Collection]. Harvard Dataverse. http://doi.org/10.7910/DVN/JUOWKP

Lovas, S, Pál, L, Kovács, N, Diószegi, J, Mckee, M and Szűcs, S (2024). The concentrations of volatile organic compounds in residential, office, and educational buildings in the Member States of the European Union between 2010 and 2023. [Data Collection]. Mendeley Data. https://doi.org/10.17632/x4887snd8j.2

Ikegawa, M, Kano, N, Ori, D, Fukuta, M, Hirano, M, Hewson, R, Yoshii, K, Kawai, T and Kawasaki, T (2024). HuR (ELAVL1) regulates the CCHFV minigenome and HAZV replication by associating with viral genomic RNA. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012553.s001

Ross, I (2024). Data & code for SanQoL-5 validity. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/N43FK

London School of Hygiene & Tropical Medicine (2024). Targeted sequencing of Plasmodium falciparum isolates from human blood and infected mosquitoes from Mali. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB73503

Haque, F, Lampe, FC, Hajat, S, Stavrianaki, K, Hasan, SMT, Faruque, ASG, Ahmed, T, Jubayer, S and Kelman, I (2024). S1 Data for: "Impacts of climate change on diarrhoeal disease hospitalisations: How does the global warming targets of 1.5–2°C affect Dhaka, Bangladesh?". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012139.s005

O'Donovan, G, Allen, D, Nkosi-gondwe, T, Anujuo, K, Abera, M, Kirolos, A, Olga, L, Thompson, D, McKenzie, K, Wimborne, E, Cole, TJ, Koulman, A, Lelijveld, N, Crampin, AC, Kangas, S, Badaloo, A, Ameya, G, Opondo, C and Kerac, M (2024). Data and code for: “Weight gain among children with severe malnutrition in therapeutic feeding programmes: a systematic review and meta-analysis”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004346.

Hyslop, C, Lutz, N and Galang, JB (2024). Net Zero Stocktake 2024. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.13768013

Burke, R (2024). HIV hospitalisation systematic review data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004347.

Brunn, A and Waage, J (2024). Data extraction results for a scoping review on AMR in food crops. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003087.

Lal, S (2024). Fiebre adult severity scores data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004332.

Falconer, J, Checkley, A, Thakker, C and Warrell, C (2024). Search strategies for "Clinical Guidelines of the British Infection Society: Eosinophilia in returning travellers and migrants from the tropics". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004338.

Molaro, M, Mohan, S, She, B, Chalkley, M, Colbourn, T, Collins, JH, Connolly, E, Graham, MM, Janoušková, E, Li lin, I, Manthalu, G, Mnjowe, E, Nkhoma, D, Twea, PD, Phillips, A, Revill, P, Tamuri, AU, Mfutso-Bengog, J, Mangal, T and Hallett, TB (2024). Data repository for manuscript "A new approach to Health Benefits Package design: an application of the Thanzi La Onse model in Malawi". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.13627184

Kumwenda, MK, Mukoka, M, Mhango, O and Choko, AT (2024). Data For: Optimising Instructional Materials for COVID-19 Rapid Tests for Self-Sampling and Testing: Mapping the Optimization Process of Manufacturer’s Instructions for Use for Self-Testing RDTs Intended for Low Literacy Contexts. [Data Collection]. Qualitative Data Repository. https://doi.org/10.5064/F6H1QLNL

Ross, I (2024). Data and code for validity of sanitation visual analogue scale. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/CX5AV

London School of Hygiene & Tropical Medicine (2024). Impact of commercial gut health interventions on caecal metagenome and broiler performance. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB79352

Bick, S, Ezezew, A, Opondo, C, Leurent, B, Argaw, W, Hunter, EC, Cumming, O, Allen, E and Dreibelbis, R (2024). Data for: Impact of a school-based water and hygiene intervention on child health and school attendance in Addis Ababa, Ethiopia: a cluster-randomised controlled trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004333.

Ip, DKM, Ng, YY, Tam, YH, Thomas, NV, Dahal, P, Stepniewska, K, Newton, PN, Guérin, PJ and Hopkins, H (2024). Additional file 3 of Non-malarial febrile illness: a systematic review of published aetiological studies and case reports from China, 1980–2015. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26798760.v1

Skrip, L, Barcon, S, Davis, G, Yeabah, TO and Kromah, M (2024). Data collection tools and dataset from tracer study of Q4D Lab, a locally developed and owned coding and biostatistics program in Liberia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26762368.v2

Ross, I (2024). Uvira cost of diarrhoeal illness. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/C2RE8

Rizk, O, Bick, S and Dreibelbis, R (2024). Dataset: Hygiene opportunities and practices captured using a novel method (pictorial 24 hr recall) compared to structured observations. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004301.

Bickersmith, SA, Saavedra, MP, Prussing, C, Lange, RE, Morales, JA, Alava, F, Vinetz, JM, Gamboa, D, Moreno Leirana, M and Conn, JE (2024). Additional file 1 of Effect of spatiotemporal variables on abundance, biting activity and parity of Nyssorhynchus darlingi (Diptera: Culicidae) in peri-Iquitos, Peru. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26709188.v1

Kim, ES, Adriko, M, Oseku, KC, Lokure, D, Webb, EL and Sabapathy, K (2024). Additional file 1 of Factors associated with hookworm and Schistosoma mansoni infections among school-aged children in Mayuge district, Uganda. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26735667.v1

Heinz, E, Pearse, O, Zuza, A, Bilima, S, Msefula, C, Musicha, P, Siyabu, P, Tewesa, E, Graf, FE, Lester, R, Lissauer, S, Cornick, J, Lewis, JM, Kawaza, K, Thomson, NR and Feasey, NA (2024). Additional file 2 of Longitudinal analysis within one hospital in sub-Saharan Africa over 20 years reveals repeated replacements of dominant clones of Klebsiella pneumoniae and stresses the importance to include temporal patterns for vaccine design considerations. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26716636.v1

Mseti, JJ, Maasayi, MS, Lugenge, AG, Mpelepele, AB, Kibondo, UA, Tenywa, FC, Odufuwa, OG, Tambwe, MM and Moore, SJ (2024). Additional file 2 of Temperature, mosquito feeding status and mosquito density influence the measured bio-efficacy of insecticide-treated nets in cone assays. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26699306.v1

Odufuwa, OG, Bradley, J, Ngonyani, S, Mpelepele, AB, Matanila, I, Muganga, JB, Bosselmann, R, Skovmand, O, Mboma, ZM and Moore, SJ (2024). Additional file 4 of Time of exposure and assessment influence the mortality induced by insecticides against metabolic resistant mosquitoes. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26687792.v1

Woolf, B, Pedder, H, Rodriguez-Broadbent, H and Edwards, P (2024). Additional file 7 of Silence is golden, but my measures still see—why cheaper-but-noisier outcome measures in large simple trials can be more cost-effective than gold standards. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26759219.v1

Lugenge, AG, Odufuwa, OG, Mseti, JJ, Swai, JK, Skovmand, O and Moore, SJ (2024). Complete series method (CSM): a convenient method to reduce daily heterogeneity when evaluating the regeneration time (RT) of insecticide-treated nets (ITNs). [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.7248714.v1

Kamuyu, R, Tarus, A, Bundala, F, Msemo, G, Shamba, D, Paul, C, Tillya, R, Murless-Collins, S, Oden, M, Richards-Kortum, R, Powell-Jackson, T, Kumar, MB, Salim, N and Lawn, JE (2024). Additional file 3 of Investment case for small and sick newborn care in Tanzania: systematic analyses. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26654020.v1

Wright, M, Smed, MK, Nelson, JL, Olsen, J, Hetland, ML, Jewell, NP, Zoffmann, V and Jawaheer, D (2024). Additional file 3 of Pre-pregnancy gene expression signatures are associated with subsequent improvement/worsening of rheumatoid arthritis during pregnancy. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26622631.v1

Adegbola, AJ, Ijarotimi, OA, Ubom, AE, Adesoji, BA, Babalola, OE, Hocke, EF, Hansson, H, Mousa, A, Bolaji, OO, Alifrangis, M and Roper, C (2024). Additional file 1 of A snapshot of the prevalence of dihydropteroate synthase-431V mutation and other sulfadoxine-pyrimethamine resistance markers in Plasmodium falciparum isolates in Nigeria. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26572123.v1

Spadar, A, Phelan, J, Clark, TG and Campino, S (2024). Additional file 1 of Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26608764.v1

Spadar, A, Phelan, JE, Clark, TG and Campino, S (2024). Additional file 3 of Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26608770.v1

Abdelmagid, N and Light, P (2024). Survey data on decision-making for childhood vaccination in crisis settings. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004292.

Bwire, C and Juel, R (2024). Historical Weather Data for Events and Non-Events Thresholds. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004298.

Paulet, E, Contreras, V, Galhaut, M, Rosenkrands, I, Holland, M, Burton, MJ, Dietrich, J, Gallouët, A, Bosquet, N, Relouzat, F, Langlois, S, Follmann, F, Le Grand, R, Labetoulle, M and Rousseau, A (2024). Multimodal mucosal and systemic immune characterization of a non-human primate trachoma model highlights the critical role of local immunity during acute phase disease. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.69p8cz982

Kalua, K and Manikavasagar, P (2024). Prevalence and causes of visual impairment among school children in Blantyre, Southern Malawi. [Data Collection]. Mendeley Data. https://doi.org/10.17632/crgbf93fnw.1

Juel, R and Bwire, C (2024). Transcriptions and text responses from participants of COP28 multi-stakeholder workshops. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004294.

Frampton, S, Seeley, J, Orievulu, K, Matthews, PC and Hordern, J (2024). Infecting Minds? The past, present and future of vaccine hesitancy in South Africa. [Data Collection]. Africa Health Research Institute. https://doi.org/10.23664/AHRI.INFECTINGMINDS.VACCINEHESITANCY.2022

Alexander, N, Dye, C, Busch, MP, Buss, L, Prete Jr, CA, Brady, OJ, Mee, P, Abrahim, CMM, Crispim, MAE, da Costa, AG, Salomon, T, Mayaud, P, Oikawa, MK, Faria, N and Sabino, EC (2024). Dynamics of SARS-CoV-2 infection over two epidemic waves in Manaus, Brazil: a serological study of seven thousand blood donors. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/ZVUCJ

Mezmur, H, Tefera, M, Jemal, M, Kahsay, B and Assefa, N (2024). Household fuel use and adverse pregnancy outcomes. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.26406418.v1

Dixon, J and Mundoga, FT (2024). Multimorbidity and Knowledge Architectures: An Interdisciplinary Global Health Collaboration (KnowM): Qualitative Dataset, Zimbabwe (2021-2024). [Data Collection]. UK Data Service. https://doi.org/10.5255/UKDA-SN-857310

Osei, I, Mendy, E, Van Zandvoort, K, Jobe, O, Sarwar, MG, Mohammed, N, Bruce, J, Greenwood, B and Mackenzie, GA (2024). Social contact data for the BHDSS and FWHDSS in the Gambia (2022). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.13101861

Panulo, M, Lamb, J, Chidziwisano, K, White, B, Dreibelbis, R and Morse, T (2024). Assessment of infrastructure, behaviours, and user satisfaction of guardian waiting shelters for secondary level hospitals in southern Malawi. S2 Checklist. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0002642.s002

Calderwood, C (2024). ERASE-TB: cross-sectional HIV, malnutrition and non-communicable diseases dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004266.

Baptiste, PJ (2024). ParisBap/TTE_ONTARGET. [Data Collection]. Github. https://github.com/ParisBap/TTE_ONTARGET/

Holt, KE and Hawkey, J (2024). interpretAMR/AMRrules. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.12724318

Avila Dextre, F, Morales Álvarez, B, Aguirre Castañeda, P, Alva, IE, López, G, Schwalb, A and Gotuzzo, E (2024). Association between HTLV-1/2 infection and COVID-19 severity in a migrant Shipibo-Konibo population in Lima, Peru: Database and dictionary. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0003442.s002

Syme, T, N'dombidje, B, Todjinou, D, Ariori, V and Ngufor, C (2024). Data for: Laboratory evaluation of the regeneration time, efficacy and wash-resistance of PermaNet® Dual (a deltamethrin-chlorfenapyr net) against susceptible and pyrethroid-resistant strains of Anopheles gambiae sensu lato. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004261.

Zeppelini, CG, Paixão, Ana Maria Borges Barreto, Santiago, D, Sady Alves, R, Espirito Santo, V, Mattos, Luciana H. B. V., Fernandes, J, Santos, Renata C. O. P., Oliveira, D, Carneiro, IO, Bazan, L, Eyre, M, Begon, M, Costa, F and Khalil, H (2024). Dataset for Analysis of ecological drivers of Rattus norvegicus positivity for Leptospira sp. and Seoul Hantavirus. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.12688262

Stevens, O and Anderson, R (2024). Population size, HIV prevalence, and antiretroviral therapy coverage among key populations in sub-Saharan Africa: collation and synthesis of survey data 2010-2023. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10838437

Shepherd, JG, Ashraf, S, Salazar-Gonzalez, JF, Salazar, MG, Downing, RG, Bukenya, H, Jerome, H, Mpanga, JT, Davis, C, Tong, L, Sreenu, VB, Atiku, LA, Logan, N, Kajik, E, Mukobi, Y, Mungujakisa, C, Olowo, MV, Tibo, E, Wunna, F, Jackson Ireland, H, Blunsum, AE, Owolabi, I, da Silva Filipe, A, Bwogi, J, Willett, BJ, Lutwama, JJ, Streicker, DG, Kaleebu, P and Thomson, EC (2024). Widespread human exposure to ledanteviruses in Uganda: A population study. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012297.s006

Ameer, A, Saleem, F, Keating, C, Gundogdu, O, Javed, S and Ijaz, UZ (2024). Dataset of 16S rRNA sequences of 111 healthy and Newcastle disease infected caecal samples from multiple chicken breeds of Pakistan. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.25795078.v1

Greenland, K (2024). Stronger-SAFE trial: Baseline and follow-up face washing data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004250.

Koussis, K, Haase, S, Withers-Martinez, C, Flynn, HR, Kunzelmann, S, Christodoulou, E, Ibrahim, F, Skehel, M, Baker, DA and Blackman, MJ (2024). Kinetic properties of the recombinantly expressed PfPKGWT, PfPKGY214, PfPKGSTmut, PfPKGT695A, PfPKGT695E and CD analysis of PfPKGWT and PfPKGSTmut. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1012360.s018

Koussis, K, Haase, S, Withers-Martinez, C, Flynn, HR, Kunzelmann, S, Christodoulou, E, Ibrahim, F, Skehel, M, Baker, DA and Blackman, MJ (2024). Peak areas from the T695 phosphorylation. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1012360.s020

Koussis, K, Haase, S, Withers-Martinez, C, Flynn, HR, Kunzelmann, S, Christodoulou, E, Ibrahim, F, Skehel, M, Baker, DA and Blackman, MJ (2024). Phosphoproteome analyses of PKG_GFP, PKG_T695A and PKG_T695E in P. falciparum schizonts. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1012360.s021

Koussis, K, Haase, S, Withers-Martinez, C, Flynn, HR, Kunzelmann, S, Christodoulou, E, Ibrahim, F, Skehel, M, Baker, DA and Blackman, MJ (2024). Proteins identified from pull down experiments of WT, PKG_GFP, PKG_T695A and PKG_T695E. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1012360.s019

Koussis, K, Haase, S, Withers-Martinez, C, Flynn, HR, Kunzelmann, S, Christodoulou, E, Ibrahim, F, Skehel, M, Baker, DA and Blackman, MJ (2024). S1 Raw Data for: "Activation loop phosphorylation and cGMP saturation of PKG regulate egress of malaria parasites". [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1012360.s023

Arunga, S (2024). Uganda Pharmacy attendants KAP Survey dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004231.

Momanyi, RO and Mugotitsa, B (2024). Extended data for 'Access to longitudinal mental health data in Africa: lessons from a landscape analysis by the INSPIRE network datahub'. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.12545609

Varkonyi, P (2024). Investigating the relationship between corruption and health outcomes in Central and Eastern Europe. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/ILNONJ

Lugano, D, Kutima, B, Kimani, M, Sigilai, A, Gitonga, J, Karani, A, Akech, D, Karia, B, Ziraba, AK, Maina, A, Lambisia, A, Omuoyo, D, Mugo, D, Lucinde, R, Owuor, S, Konyino, G, Newman, J, Bailey, D, Nduati, E, Githinji, G, Agoti, CN, Bejon, P, Scott, JAG, Agweyu, A, Kagucia, W, Warimwe, GM, Sande, C, Ochola-Oyier, LI and Nyagwange, J (2024). Replication Data for: Evaluation of population immunity against SARS-CoV-2 variants, EG.5.1, FY.4, BA.2.86, JN.1, and JN.1.4, using samples from two health demographic surveillance systems in Kenya. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/6DSHMB

Nakamura, R (2024). ryotanakamura1/smoking. [Data Collection]. Github. https://github.com/ryotanakamura1/smoking/

Falconer, J and Kristan, M (2024). Search strategies for: "Recent dengue outbreaks in Africa: what are the gaps in research?". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004241.

Langston, H, Fortes Francisco, A, Doidge, C, Roberts, CH, Khan, AA, Jayawardhana, S, Taylor, MC, Kelly, JM and Lewis, MD (2024). Source data for: "Dynamics of Trypanosoma cruzi infection in hamsters and novel association with progressive motor dysfunction". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012278.s003

Amoah, A and Mclean, E (2024). Dataset for: Factors associated with self-reported diagnosed asthma in urban and rural Malawi: observations from a population-based study of 3 non-communicable diseases. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.12097719

Abramsky, T, Buller, AM, Nakuti, J, Mugooda, H and Opito, D (2024). The SASA! Together Radio Booster study: Baseline and follow-up community survey data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004223.

Saso, A (2024). GaPs Clinical Data Dictionaries. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11567608

Saso, A (2024). The Gambian Pertussis Study (GaPs) Protocol: Supplementary data. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11567608

Simms, V and Ferrand, R (2024). VITALITY: Vitamin D for adolescents with HIV to reduce musculoskeletal morbidity and immunopathology - Baseline Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003868.

London School of Hygiene & Tropical Medicine (2024). WGS An melas Bijagos Guinea Bissau. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB75927

Renneker, KK, Mtuy, TB, Kabona, G, Mbwambo, SG, Mosha, P, Mollel, JM, Hooper, P, Emerson, PM, Hollingsworth, TD, Butcher, R, Solomon, AW and Harding-Esch, EM (2024). Framework Matrix. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0011941.s004

Van zandvoort, K, Hassan, AI, Bobe, MO, Pell, CL, Ahmed, MS, Ortika, BD, Ibrahim, S, Abdi, MI, Karim, MA, Eggo, RM, Yusuf, S, Hinds, J, Soleman, SM, Cummings, R, Mcgowan, CR, Mulholland, EK, Satzke, C, Hergeeye, MA, Checchi, F and Flasche, S (2024). Pre-vaccination carriage prevalence of Streptococcus pneumoniae serotypes among internally displaced people in Somaliland. Data and analyses. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11493115

Falconer, J, Gerard, J and D'Mello-Guyett, L (2024). Search strategies for "Articulating a global research agenda on the effects of climate change hazards on hygiene-related health and wellbeing outcomes". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004222.

Buller, AM, Howard-Merrill, L, Pichon, M, Sono, R, Gimunta, V, Hofer, E, Kiluvia, F, Alfred, M, Yohanna, E, Dyanka, J, Ephraim, T, James, N, Joseph, W, Kinanda, I, Mbaga, M, Rogers, MR and Stanley, S (2024). Focus group discussions with adolescent girls and their caregivers evaluating a radio drama aimed at changing the social norms driving age-disparate transactional sex in Tanzania. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004220.

Humphrey, A (2024). Transcripts from an interview-based study of remote GP consultations with patients from marginalised groups. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003745.

Osei, I (2024). school_contact_survey_2022. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11428979

Falconer, J, Hutchinson, E and Kitutu, F (2024). Search strategy for "Improving practice in Ugandan drug shops: a holistic approach to regulation". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004219.

Kusemererwa, S, Kansiime, S, Nakamanya, S, Mbabazi, E, Fox, J, McCormack, S, Kaleebu, P, Ruzagira, E and PrEPVacc Study Group (2024). Data set for: Contraceptive use, prevalence and incidence of pregnancy and associated factors among women participating in a vaccine preparedness cohort study in Masaka, Uganda, a retrospective secondary analysis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004212.

Sliversteri, S, Ssali, A, Bahemuka, UM, Nsubuga, D, Muwanga, M, Nsereko, C, Ssemwanga, E, Robert, A, Seeley, J, Elliott, A and Ruzagira, E (2024). Structural and social factors affecting COVID-19 vaccine uptake among healthcare workers and older people in Uganda: A qualitative analysis. Data file. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0002188.s003

Ahimbisibwe, I, Tumusiime, C, Muteebwa, L, Mupere, E and Biraro, IA (2024). Data from: Tuberculosis research in road construction sites. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.t4b8gtj8s

Samanez, AA, Mayo, MC, Romero, D, Murray, K, Segura, M, Real, R and Olivero, J (2024). Presence and absence of records of dengue cases, yellow fever cases, and vector occurrences on a worldwide 7,774-km² hexagonal grid. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.25897024.v1

Wong, A (2024). Codelists for: "Potential drug interactions with direct oral anticoagulants". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004214.

Natukunda, A, Zirimenya, L, Nkurunungi, G, Nassuna, J, Elliott, AM and Webb, E (2024). Data supporting “The effect of current helminth infection on vaccine responses among adolescents living in helminth-endemic islands of Lake Victoria, Uganda”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003862.

Sharma, E (2024). Interviews with informants providing perinatal care or support to Afghan women in Serbia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004213.

Robinson, E, Ouabo, A, Rose, L, van Braak, F, Vyncke, J, Wright, R, Gray, N, Sakama, NS, Aboukar, EJ, Fierte, MM, Woinzoukou, D, Ewers, L, Serpande, C, Stein, S, Van Boetzelaer, E, Kpahina, OA, Sabe, SC, Rao, B and Kuehne, A (2024). Additional file 1 of Mixed-method evaluation study of a targeted mass drug administration of long-acting anti-malarials among children aged 3 months to 15 years in the Bossangoa sub-prefecture, Ouham, Central African Republic, during the COVID-19 pandemic. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.25834200.v1

Leem, D, Turon, G, Gruson, H, Chue Hong, N, Kaur Bhogal, S, Lo, S, Druskat, S and Soiland-Reyes, S (2024). Software Contributor Roles Crosswalk. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11202655

Weiss, H, Nelson, KA, Mugenyi, L, Batuusa, L, Thomas, K and Baleke, C (2024). MENISCUS Trial quantitative survey data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003865.

Asante, KP, Oduro, A, Welega, P, Ansong, D, Odei-Lartey, E, Gyan, T, Gyaase, S, Sarfo, A, Samuels, A, Westercamp, N, Akech, S, Kwambai, T, Khazenzi, C, Milligan, P, Snell, P, Moore, K, Fogelson, A, Schellenberg, D, Hamel, M, Okine, R, Mathanga, D, Mwapasa, V, Kapito, A, Mvalo, T, Msuku, H, Stanley, C, Njuguna, P, Kariuki, S, Otieno, L, Chimala, A, Afari, EA, Bejon, P, Maleta, K, Agbenyega, T, Snow, RWv, Zulu, M, Chinkhumba, J, Chinkumba, J, Abubakari, SW, Akumani, A, Adu-Gyasi, D, Agbokey, F, Amenga-Etego, S, Buabeng, P, Awini, E, Sylverken, J, Kampim, A, Koram, KA, Hodgson, A, Binka, FN, Tweneboah, PO, Ondiegi, B, Seda, B, Akach, D, Orwa, G, Nyang’au, I, Odunga, O, Gumba, F, Copeland, N, Mumo, E, Musa, M, English, M, Haji, A, Njoroge, J, Msuku, H, Samuel, V, Mariko, HT, Juliano, J, Msumba, L, Mungwira, RG, Zimba, BE, Desai, M, Furrer, E, Aponte, J, Alonso, P, Sillah, JS and Kalu, AA (2024). Replication Data for: Feasibility, safety, and impact of the RTS,S/AS01E malaria vaccine when implemented through national immunisation programmes: evaluation of cluster-randomised introduction of the vaccine in Ghana, Kenya, and Malawi. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/VOZU4T

Schaap, A and Amofa-Sekyi, M (2024). Dataset for: "Comparing patterns of recent and remote Mycobacterium tuberculosis infection determined using the QuantiFERON-TB Gold Plus assay in a high TB burden setting". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003879.

Jarvis, CI, Coletti, P, Backer, J, Munday, JD, Faes, C, Beutels, P, Althaus, C, Low, N, Wallinga, J, Hens, N and Edmunds, J (2024). CoMix data (last round in BE, CH, NL and UK). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.11154065

Ross, I (2024). Data & code for SanQoL-5 discrete choice experiment in Mozambique. [Data Collection]. Open Science Framework. https://osf.io/38vsh/

Brown, J, Wing, K and Douglas, IJ (2024). Clinical codelist - Aurum - uveitis and retinal detachment. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003873.

Brown, J, Wing, K and Douglas, IJ (2024). Clinical codelist - GOLD - uveitis and retinal detachment. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003874.

Abdurahman, O (2024). Data for: "Distribution and viability of ocular and non-ocular Chlamydia trachomatis in households in a trachoma-endemic community in Oromia, Ethiopia". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003869.

Brown, J, Wing, K and Douglas, IJ (2024). ICD codelist for uveitis and retinal detachment. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003875.

Brown, J, Wing, K and Douglas, IJ (2024). OPCS codelist for retinal detachment. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003876.

Brown, J, Wing, K and Douglas, IJ (2024). Therapy codelist - Aurum - antibiotics and corticosteroids. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003871.

Brown, J, Wing, K and Douglas, IJ (2024). Therapy codelist - GOLD - antibiotics and corticosteroids. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003872.

Bousema, T, Collins, K, Ouedraogo, A, Guelbeogo, WM, Soulama, I, Ouattara, M, Sobie, S, Ouedraogo, N, Coulibaly, A, Nombre, A, Lanke, K, Ramjith, J, Awandu, S, Serme, S, Henry, N, Stone, WJR, Ouedraogo, I, Holden, T, Sirima, S, Bradley, J, Soremekun, S, Selvaraj, P, Gerardin, J, Drakeley, C and Tiono, A (2024). The impact of weekly fever-screening and treatment and monthly RDT testing and treatment on the infectious reservoir of malaria in Burkina Faso: results from a cluster-randomised trial. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.fxpnvx117

Phelan, J (2024). Delta shape data. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.25713279.v1

Chatterjee, S, Das, P, Stallworthy, G, Bhambure, G, Munje, R and Vassall, A (2024). Catastrophic costs for tuberculosis patients in India: Impact of methodological choices - Complete dataset. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0003078.s005

Lamberti, O and Bustinduy, A (2024). Data for: "Morbidity Operational Research for Bilharziasis Implementation Decisions for Girls and Women (MORBID-FGS) cross sectional study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003850.

Institute for Health Metrics and Evaluation (IHME) and London School of Hygiene and Tropical Medicine (2024). Measles Seroprevalence Systematic Review and Bias Assessment 1962-2019. [Data Collection]. Global Health Data Exchange (GHDx). https://ghdx.healthdata.org/record/ihme-data/measles-serosurvey-bias-systematic-review

Cook, S (2024). NHLI-Respiratory-Epi/Alcohol_use_disorder_codelist. [Data Collection]. Github. https://github.com/NHLI-Respiratory-Epi/Alcohol_use_disorder_codelist

Uranw, S, Bhattarai, NR, Cloots, K, Roy, L, Rai, K, Kiran, U, Pyakurel, UR, Lal, BK, Burza, S, Rijal, S, Karki, P, Khanal, B and Hasker, E (2024). Visceral leishmaniasis in the hills of western Nepal- a transmission. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0289578.s004

Fivian, E, Parida, M, Mohanty, S, Harris-fry, H, Padhan, S and Kadiyala, S (2024). Mobile Interventions for Upscaling Participatory Action and Videos for Agriculture and Nutrition (m-UPAVAN): Qualitative Interview Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003847.

Wang, Z, Wong, A, Carreira, H, Strongman, H, Matthewman, J, Arendse, K, Funston, G and Dedman, D (2024). Code lists for "Association between risk of cancer and warfarin comparing with direct oral anticoagulants: a population-based cohort study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003842.

Mtuy, T (2024). Nepal Traditional Healers KAP Survey dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003843.

Inayat, B, Nyarko, PB, Ba Ash, A, Cohen, C, Ceesay, S, Achan, J, Dabira, E, Nakajima, R, Jain, A, Taghavian, O, Jasinskas, A, Felgner, PL, D'Slessandro, U, Bousema, T, Travassos, M, Radulescu, O and Claessens, A (2024). Diverse and weakly immunogenic var gene expression facilitates malaria infection. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10940094

Lee, N and Win, TZ (2024). Risk of bias assessment for Corticosteroids for leptospirosis treatment. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10906064

Bousema, T (2024). Data from: Quantification of sporozoite expelling by Anopheles mosquitoes infected with laboratory and naturally circulating P. falciparum gametocytes. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.dbrv15f89

Messina, D, Paoletti, O, Belitser, S, Gini, RM, Limoncella, G and Schultze, A (2024). VAC4EU/CVM: WP4 SCCS sensitivity code for publication/Zenodo. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.8272057

Farisco, M, Bumblytė, IA, Franssen, C, Nitsch, D, Zecchino, I, Capasso, G and Hafez, G (2024). Cognitive decline related to chronic kidney disease as an exclusion factor from kidney transplantation: Results from an international survey. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/EH5CK

Bose, I, Dreibelbis, R, Green, R, Murray, K, Ceesay, O and Kovats, S (2024). Data collection tools for: "Changing rainfall patterns, household water use and health: risks and household responses in rural Gambia". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003808.

Suau Sans, M, Manneh, M, Ceesay, I, Bittaye, A, de Crombrugghe, G, Keeley, AJ, de Silva, TI, Palmer, J, Armitage, E and Marks, M (2024). Interview transcripts for: "Health-seeking behaviour and beliefs around sore throat in The Gambia: A qualitative study". [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0002257.s006

Matthewman, J, Strongman, H, Suffel, AM and Andresen, K (2024). Data for "Checklist and guidance on creating codelists for electronic health records research". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10852955

Roell, Y, Pezzi, L, Lozano-Parra, A, Olson, D, Messina, J, Quandelacy, T, Drexler, JF, Brady, O, Karimzadeh, M and Jaenisch, T (2024). S1 Table for "Assessing vulnerability for future Zika virus outbreaks using seroprevalence data and environmental suitability maps". [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0012017.s001

López-Jiménez, AT, Brokatzky, D, Pillay, K, Williams, T, Özbaykal Güler, G and Mostowy, S (2024). High-content high-resolution microscopy and deep learning assisted analysis reveals host and bacterial heterogeneity during Shigella infection. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10766626

Keegan, S, Pedersen, A and Fenton, A (2024). The impact of within-host coinfection interactions on between-host parasite transmission dynamics varies with spatial scale. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.tdz08kq68

Lim, A and Brady, OJ (2024). OpenDengue/master-repo. [Data Collection]. GitHub. https://github.com/OpenDengue/master-repo

Fivian, E, Harris-Fry, H, Pradhan, R, Mohanty, S, Padhan, S, Rath, S, James, P, Koniz-Booher, P, Nair, N, Haghparast-Bidgoli, H, Kishor Mishra, N, Rath, S, Beaumont, E, Danton, H, Krishnan, S, Parida, M, Kumar, A, Upadhyay, A, Tripathy, P, Skordis, J, Sturgess, J, Elbourne, D, Prost, A, Allen, E and Kadiyala, S (2024). Upscaling Participatory Action and Videos for Agriculture and Nutrition (UPAVAN) study data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003642.

Reniers, G and Dulani, B (2024). Rapid Mortality Mobile Phone Survey, Malawi 2022-2023. [Data Collection]. DataFirst, Cape Town. https://doi.org/10.25828/M86Z-NF08

Doyle, A (2024). Data for: Young People’s use of Technology, and mental health and well-being. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003320.

Burke, R (2024). Computer Aided Screening for Tuberculosis in Low Resource Environments (CASTLE) trial data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003552.

Oswald, W and Okiya, S (2024). TUMIKIA Project Household Questionnaire & Stool Sample Collection Form. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003812.

Kyamulabi, A, Kiss, L, Kasalirwe, F, Kamya, I, Pearlman, J, Knight, L, Nnyombi, A, Devries, K, Tanton, C and Walakira, E (2024). Promoting Inclusion in Decent Work for Ugandan Young People, 2020. [Data Collection]. UK Data Service. https://doi.org/10.5255/UKDA-SN-856975

London School of Hygiene & Tropical Medicine (2024). Anopheles gambiae Bijagos 2022 WGS. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB71957

Falconer, J, Scheelbeek, P and Leung, J (2024). Search strategies for “Life cycle environmental impacts of alcohol production: a systematic review”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003793.

Khan, PY (2024). Data for: Karachi adult tuberculosis prevalence and child Mycobacterium tuberculosis infection survey, 2018-2019. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003788.

Bojo, S, Kokwaro, G and Agweyu, A (2024). Additional file 3 of Evaluating the level of knowledge of HIV prevention methods and associated socio-demographic factors among adolescents before and after participating in health education in Nimule town of South Sudan. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.28478668.v1

Bonell, C, Allen, E, Warren, E, McGowan, J, Bevilacqua, L, Jamal, F, Legood, R, Wiggins, M, Opondo, C, Mathiot, A, Sturgess, J, Fletcher, A, Sadique, Z, Elbourne, D, Christie, D, Bond, L, Scott, S and Viner, R (2024). The Learning Together intervention: study data from three surveys in the INCLUSIVE cluster randomised controlled trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003377.

Staedke, SG, Kamya, M, Dorsey, G, Donnelly, M, Nankabirwa, J, Maiteki-Sebuguzi, C, Opigo, J, Greenhouse, B, Briggs, J, Rodriguez-Barraquer, I, Pitt, C, Snyman, K, Namuganga, J and Gonahasa, S (2024). Dataset: LLINEUP2 Cluster Randomized Trial. [Data Collection]. ClinEpiDB. https://clinepidb.org/ce/app/workspace/analyses/DS_624583e93e/new

Drakeley, C, Dicko, A and Bousema, T (2024). Dataset: NECTAR1 Randomized Controlled Trial. [Data Collection]. ClinEpiDB. https://clinepidb.org/ce/app/workspace/analyses/DS_7b47eb7469/new

Drakeley, C, Dicko, A and Bousema, T (2024). Dataset: NECTAR3 Randomized Controlled Trial. [Data Collection]. ClinEpiDB. https://clinepidb.org/ce/app/workspace/analyses/DS_d00683a135/new

Drakeley, C, Dicko, A and Bousema, T (2024). Dataset: NECTAR4 Randomized Controlled Trial. [Data Collection]. ClinEpiDB. https://clinepidb.org/ce/app/workspace/analyses/DS_861ea66681/new

London School of Hygiene & Tropical Medicine (2024). WGS of Ethiopian Anopheles Stephensi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Muriithi, FG, Banke-Thomas, A, Forbes, G, Gakuo, RW, Thomas, E, Gallos, ID, Devall, A, Coomarasamy, A and Lorencatto, F (2024). ROBVIS generic dataset. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pgph.0002950.s003

Muriithi, FG, Banke-Thomas, A, Forbes, G, Gakuo, RW, Thomas, E, Gallos, ID, Devall, A, Coomarasamy, A and Lorencatto, F (2024). A systematic review of behaviour change interventions to improve maternal health outcomes in sub-Saharan Africa: Framework analysis and coding. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pgph.0002950.s002

Muriithi, FG, Banke-Thomas, A, Forbes, G, Gakuo, RW, Thomas, E, Gallos, ID, Devall, A, Coomarasamy, A and Lorencatto, F (2024). A systematic review of behaviour change interventions to improve maternal health outcomes in sub-Saharan Africa: Included studies and extracted data. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pgph.0002950.s001

Muriithi, FG, Banke-Thomas, A, Forbes, G, Gakuo, RW, Thomas, E, Gallos, ID, Devall, A, Coomarasamy, A and Lorencatto, F (2024). A systematic review of behaviour change interventions to improve maternal health outcomes in sub-Saharan Africa: Quality assessment. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pgph.0002950.s005

Gupta, R, Howard, A, Davies, M, Oikonomou, E, Mavrogianni, A, Petrou, G, Tsoulou, I and Milojevic, A (2024). Governing the Climate Adaptation of Care Settings Dataset, 2022. [Data Collection]. UK Data Service. https://doi.org/10.5255/UKDA-SN-856907

Chaila, MJ, Mcleod, D, Vermund, SH, Mbolongwe-Thornicroft, M, Mbewe, M, Mubekapi-Musadaidzwa, C, Harper, A, Schaap, A, Floyd, S, Hoddinott, G, Hayes, R, Fidler, S, Ayles, H and Shanaube, K (2024). Assessment of a screening tool to aid home-based identification of adolescents (aged 10–14) living with HIV in Zambia and South Africa: HPTN 071 (PopART) study. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0266573.s001

Davies, K, Panulo, M, MacLeod, C, Tracy, M, Chidziwisano, K and Dreibelbis, R (2024). Data for: "Inclusion of persons living with disabilities in a district-wide sanitation programme: a cross-sectional study in rural Malawi". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003783.

Tiley, K (2024). katietiley/Wolbachia_TPP_PPC. [Data Collection]. Github. https://github.com/katietiley/Wolbachia_TPP_PPC

Aunger, R and Grigoryev, D (2024). Motives validation. [Data Collection]. Open Science Framework. https://osf.io/njkcq/

Cooper, HB, Vezina, B, Hawkey, J, Passet, V, López-Fernández, S, Monk, JM, Brisse, S, Holt, KE and Wyres, KL (2024). Supplemental Data for "A validated pangenome-scale metabolic model for the Klebsiella pneumoniae species complex.". [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.24871914.v1

Nilles, EJ and Kucharski, AJ (2024). enilles1/immunoepidemiology. [Data Collection]. Github. https://github.com/enilles1/immunoepidemiology

Garcia, KKS, Soremekun, S, Abrahão, AA, Marchesini, PB, Drakeley, C, Ramalho, WM and Siqueira, AM (2024). Is Brazil reaching malaria elimination? A time series analysis of malaria cases from 2011 to 2023. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0002845.s002

Natukunda, A, Nkurunungi, G, Zirimenya, L, Nassuuna, J, Elliott, AM and Webb, E (2024). Data supporting "Does schistosome or malaria exposure contribute to urban-rural differences in vaccine responses in Uganda? A causal mediation analysis using data from three linked randomised controlled trials.". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003761.

Nkurunungi, G, Nassuuna, J, Natukunda, A, Zirimenya, L, Webb, E and Elliott, A (2024). Data supporting "The effect of intensive praziquantel treatment on vaccine-specific responses among schoolchildren in Ugandan schistosomiasis-endemic islands: results of the POPVAC A randomised, controlled trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003758.

Zirimenya, L, Natukunda, N, Nassuuna, N, Nkurunungi, G, Elliott, AM and Webb, E (2024). Data supporting "The effect of intermittent preventive treatment for malaria with dihydroartemisinin-piperaquine on vaccine-specific responses among schoolchildren in rural Uganda: results of the POPVAC B randomised, controlled trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003759.

Nassuuna, J, Zirimenya, L, Nkurunungi, G, Natukunda, A, Webb, E and Elliott, AM (2024). Data supporting: "The effect of BCG revaccination on the response to unrelated vaccines in urban Ugandan adolescents: results of the POPVAC C randomised, controlled trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003760.

Kyamulabi, A, Kiss, L, Kasalirwe, F, Kamya, I, Pearlman, J, Knight, L, Nnyombi, A, Devries, K, Tanton, C and Walakira, E (2024). Promoting inclusion in decent work for Ugandan young people: will reducing violence help? Qualitative interview and focus group data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003685.

Koech, A, Omuse, G, Mugo, A, Mwaniki, I, Mutunga, J, Mukhanya, M, Wanje, O, Mwashigadi, G, Katana, G, Craik, R, Von Dadelszen, P, Le Doare, K, Temmermen, M and The PRECISE Network (2024). SARS-CoV-2 Seroprevalence in Kenya dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003755.

Roca, A, Janha, R, Bah, A, Jah, H, Tourey, F, Idris, Y, Keita, S, Gaye, Y, Jallow, S, Faye-joof, T, Njie, B, Craik, R, Mohammed, N, von Dadelszen, P and D’alessandro, U (2024). SARS-CoV-2 Seroprevalence in The Gambia dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003754.

Okek, EJ, Masembe, FJ, Kiconco, J, Kayiwa, J, Amwine, E, Obote, D, Alele, S, Nahabwe, C, Were, J, Bagaya, B, Balinandi, S, Lutwama, J and Kaleebu, P (2024). Re-testing as a method of implementing external quality assessment program for COVID-19 real time PCR testing in Uganda. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0287272.s001

Abbas, KM and Vaccine Impact (2024). vaccine-impact/hpv_vaccine_equity. [Data Collection]. Github. https://github.com/vaccine-impact/hpv_vaccine_equity

Page, AE, Sear, R and Ringen, E (2024). Women’s subsistence strategies predict fertility across cultures, but context matters. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/8D9N2

Buller, AM, Howard-Merrill, L, Pichon, M, Sono, R, Gimunta, V, Rutenge, O, Ally, H, Kori, V, Lucas, J, Tibesigwa, E and Vuri, V (2024). Longitudinal in-depth interview data with adolescent girls and their caregivers evaluating a radio drama aimed at changing the social norms driving age-disparate transactional sex in Tanzania. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003750.

Bidulka, P (2024). Codelists for: "Comparative effectiveness of alternative second-line oral antidiabetic treatments on metabolic, kidney, and cardiovascular outcomes amongst people with type 2 diabetes mellitus: a cohort study using routinely collected health data". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003743.

Abaasa, A and Bahemuka, U (2024). Data for: "COVID-19 vaccine roll-out in Uganda: a case study of uptake and associated factors among health care workers and older people". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003735.

Hensen, B, Phiri, MM, Sigande, L, Schaap, A, Simuyaba, M, Zulu-Phiri, R, Mwape, L, Floyd, S, Fidler, S, Hayes, R, Simwinga, M and Ayles, H (2024). Cross sectional survey data for self-reported ever and recent (last 12 months) STI testing. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003742.

Silva, S, Fatumo, S and Nitsch, D (2024). Additional file 1 of Mendelian randomization studies on coronary artery disease: a systematic review and meta-analysis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.25001667.v1

Saleem, F, Ameer, A, Keating, C, Gundogdu, O, Javed, S and Ijaz, UZ (2024). Dataset of 569 metagenome-assembled genomes from the caeca of multiple chicken breeds from commercial and backyard farming setups of Pakistan. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.24901884.v3

Midões, C, De Cian, E, Pasini, G, Pesenti, S and Mistry, M (2024). SHARE-ENV - Exposure to Environmental Hazards. [Data Collection]. Mendeley Data. https://doi.org/10.17632/nx2vhfyrm6.1

Thompson, R, Omoyeni, D and Baptista Mieiro, L (2024). Clinical Codelist - Aurum - Psychosis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003737.

Higgins, M (2024). MatthewHiggins2017/PanPlasmodiumRPALFManuscript. [Data Collection]. Github. https://github.com/MatthewHiggins2017/PanPlasmodiumRPALFManuscript

Simms, V, Dziva Chikwari, C, Ferrand, R and Bandason, T (2024). Data for: "Differentiated HIV care cascade for youth in Zimbabwe". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003649.

Traore, L (2024). Rapid Assessment of Avoidable Blindness Dataset: Mali, Koulikoro (2024). [Data Collection]. London School of Hygiene & Tropical Medicine RAAB Repository. https://doi.org/10.17037/RAABDATASET.00000399.

Nimmo, C, Ortiz, AT, Tan, CCS, Pang, J, Acman, M, Millard, J, Padayatchi, N, Grant, AD, O’Donnell, M, Pym, A, Brynildsrud, OB, Eldholm, V, Grandjean, L, Didelot, X, Balloux, F and van Dorp, L (2024). Detection of a historic reservoir of bedaquiline/clofazimine resistance-associated variants in Mycobacterium tuberculosis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.7082041.v1

Penzias, RE, Bohne, C, Ngwala, SK, Zimba, E, Lufesi, N, Rashid, E, Gicheha, E, Odedere, O, Dosunmu, O, Tillya, R, Shabani, J, Cross, JH, Liaghati-Mobarhan, S, Chiume, M, Banda, G, Chalira, A, Wainaina, J, Gathara, D, Irimu, G, Adudans, S, James, F, Tongo, O, Ezeaka, VC, Msemo, G, Salim, N, Day, LT, Powell-Jackson, T, Chandna, J, Majamanda, M, Molyneux, EM, Oden, M, Richards-Kortum, R, Ohuma, EO, Paton, C, Hailegabriel, T, Gupta, G and Lawn, JE (2024). Health facility assessment of small and sick newborn care in low- and middle-income countries: systematic tool development and operationalisation with NEST360 and UNICEF. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.7111731.v1