Data capture method
Number of items: 104.
3 January 2006
  • The genome of Rhizobium leguminosarum has recognizable core and accessory components. (2006) Young, J Peter W; Crossman, Lisa C; Johnston, Andrew WB; Thomson, Nick; Ghazoui, Zara F; Hull, Katherine H; Wexler, Margaret; Curson, Andrew RJ; Todd, Jonathan D; Poole, Philip S; Mauchline, Tim H; East, Alison K; Quail, Michael A; Churcher, Carol; Arrowsmith, Claire; Cherevach, Inna; Chillingworth, Tracey; Clarke, Kay; Cronin, Ann; Davis, Paul; Fraser, Audrey; Hance, Zahra; Hauser, Heidi; Jagels, Kay; Moule, Sharon; Mungall, Karen; Norbertczak, Halina; Rabbinowitsch, Ester; Sanders, Mandy; Simmonds, Mark; Whitehead, Sally; Parkhill, Julian
    • 6 August 2009
  • Putative DNA G-quadruplex formation within the promoters of Plasmodium falciparum var genes: Supplementary data. (2009) Smargiasso, Nicolas; Gabelica, Valérie; Damblon, Christian; Rosu, Frédéric; De Pauw, Edwin; Teulade-Fichou, Marie-Paule; Rowe, Alexandra; Claessens, Antoine
    • 2011
  • Identification and characterisation of bacterial TIR domains, with particular focus on yersinia pestis: Study Data. (2011) Spear, Abigail Mary grid_on
    • 30 June 2011
  • Design of a variant surface antigen-supplemented microarray chip for whole transcriptome analysis of multiple Plasmodium falciparum cytoadherent strains, and identification of strain-transcendent rif and stevor genes: Additional files. (2011) Claessens, Antoine; Ghumra, Ashfaq; Gupta, Archna P; Mok, Sachel; Bozdech, Zbynek; Rowe, J Alexandra
    • 21 February 2012
  • Phase Ia clinical evaluation of the safety and immunogenicity of the Plasmodium falciparum blood-stage antigen AMA1 in ChAd63 and MVA vaccine vectors. (2012) Sheehy, Susanne H; Duncan, Christopher J. A.; Elias, Sean C.; Biswas, Sumi; Collins, Katharine A.; O'hara, Geraldine; Halstead, Fenella D.; Ewer, Katie J.; Mahungu, Tabitha; Spencer, Alexandra J.; Miura, Kazutoyo; Poulton, Ian D.; Dicks, Matthew D. J.; Edwards, Nick J.; Berrie, Eleanor; Moyle, Sarah; Colloca, Stefano; Cortese, Riccardo; Gantlett, Katherine; Long, Carole A.; Lawrie, Alison M.; Gilbert, Sarah C.; Doherty, Tom; Nicosia, Alfredo; Hill, Adrian V. S.; Draper, Simon J.
    • 7 August 2012
  • Unusual stability of messenger RNA in snake venom reveals gene expression dynamics of venom replenishment. (2012) Currier, Rachel; Calvete, Juan J; Sanz, Libia; Harrison, Robert A; Rowley, Paul D; Wagstaff, Simon C
    • 2014
  • Robust Identification of Noncoding RNA from Transcriptomes Requires Phylogenetically-Informed Sampling. (2014) Lindgreen, Stinus; Umu, Sinan Uğur; Lai, Alicia Sook-Wei; Eldai, Hisham; Liu, Wenting; McGimpsey, Stephanie; Wheeler, Nicole E.; Biggs, Patrick J.; Thomson, Nick R.; Barquist, Lars; Poole, Anthony M.; Gardner, Paul P.
    • 18 December 2014
  • Fine-Scale Mapping of the 5q11.2 Breast Cancer Locus Reveals at Least Three Independent Risk Variants Regulating MAP3K1: Supplemental Data. (2014) Glubb, Dylan M.; Maranian, Mel J.; Michailidou, Kyriaki; Pooley, Karen A.; Meyer, Kerstin B.; Kar, Siddhartha; Carlebur, Saskia; O’Reilly, Martin; Betts, Joshua A.; Hillman, Kristine M.; Kaufmann, Susanne; Beesley, Jonathan; Canisius, Sander; Hopper, John L.; Southey, Melissa C.; Tsimiklis, Helen; Apicella, Carmel; Schmidt, Marjanka K.; Broeks, Annegien; Hogervorst, Frans B.; van der Schoot, C. Ellen; Muir, Kenneth; Lophatananon, Artitaya; Stewart-Brown, Sarah; Siriwanarangsan, Pornthep; Fasching, Peter A.; Ruebner, Matthias; Ekici, Arif B.; Beckmann, Matthias W.; Peto, Julian; Silva, Isabel; Fletcher, Olivia; Johnson, Nichola; Pharoah, Paul D.P.; Bolla, Manjeet K.; Wang, Qin; Dennis, Joe; Sawyer, Elinor J.; Tomlinson, Ian; Kerin, Michael J.; Miller, Nicola; Burwinkel, Barbara; Marme, Frederik; Yang, Rongxi; Surowy, Harald; Guénel, Pascal; Truong, Thérèse; Menegaux, Florence; Sanchez, Marie; Bojesen, Stig E.; Nordestgaard, Børge G.; Nielsen, Sune F.; Flyger, Henrik; González-Neira, Anna; Benitez, Javier; Zamora, M. Pilar; Arias Perez, Jose Ignacio; Anton-Culver, Hoda; Neuhausen, Susan L.; Brenner, Hermann; Dieffenbach, Aida Karina; Arndt, Volker; Stegmaier, Christa; Meindl, Alfons; Schmutzler, Rita K.; Brauch, Hiltrud; Ko, Yon-Dschun; Brüning, Thomas; Nevanlinna, Heli; Muranen, Taru A.; Aittomäki, Kristiina; Blomqvist, Carl; Matsuo, Keitaro; Ito, Hidemi; Iwata, Hiroji; Tanaka, Hideo; Dörk, Thilo; Bogdanova, Natalia V.; Helbig, Sonja; Lindblom, Annika; Margolin, Sara; Mannermaa, Arto; Kataja, Vesa; Kosma, Veli-Matti; Hartikainen, Jaana M.; Wu, Anna H.; Tseng, Chiu-chen; Van Den Berg, David; Stram, Daniel O.; Lambrechts, Diether; Zhao, Hui; Weltens, Caroline; van Limbergen, Erik; Chang-Claude, Jenny; Flesch-Janys, Dieter; Rudolph, Anja; Seibold, Petra; Radice, Paolo; Peterlongo, Paolo; Barile, Monica; Capra, Fabio; Couch, Fergus J.; Olson, Janet E.; Hallberg, Emily; Vachon, Celine; Giles, Graham G.; Milne, Roger L.; McLean, Catriona; Haiman, Christopher A.; Henderson, Brian E.; Schumacher, Fredrick; Le Marchand, Loic; Simard, Jacques; Goldberg, Mark S.; Labrèche, France; Dumont, Martine; Teo, Soo Hwang; Yip, Cheng Har; See, Mee-Hoong; Cornes, Belinda; Cheng, Ching-Yu; Ikram, M. Kamran; Kristensen, Vessela; Zheng, Wei; Halverson, Sandra L.; Shrubsole, Martha; Long, Jirong; Winqvist, Robert; Pylkäs, Katri; Jukkola-Vuorinen, Arja; Kauppila, Saila; Andrulis, Irene L.; Knight, Julia A.; Glendon, Gord; Tchatchou, Sandrine; Devilee, Peter; Tollenaar, Robert A.E.M.; Seynaeve, Caroline; Van Asperen, Christi J.; García-Closas, Montserrat; Figueroa, Jonine; Chanock, Stephen J.; Lissowska, Jolanta; Czene, Kamila; Klevebring, Daniel; Darabi, Hatef; Eriksson, Mikael; Hooning, Maartje J.; Hollestelle, Antoinette; Martens, John W.M.; Collée, J. Margriet; Hall, Per; Li, Jingmei; Humphreys, Keith; Shu, Xiao-Ou; Lu, Wei; Gao, Yu-Tang; Cai, Hui; Cox, Angela; Cross, Simon S.; Reed, Malcolm W.R.; Blot, William; Signorello, Lisa B.; Cai, Qiuyin; Shah, Mitul; Ghoussaini, Maya; Kang, Daehee; Choi, Ji-Yeob; Park, Sue K.; Noh, Dong-Young; Hartman, Mikael; Miao, Hui; Lim, Wei Yen; Tang, Anthony; Hamann, Ute; Torres, Diana; Jakubowska, Anna; Lubinski, Jan; Jaworska, Katarzyna; Durda, Katarzyna; Sangrajrang, Suleeporn; Gaborieau, Valerie; Brennan, Paul; McKay, James; Olswold, Curtis; Slager, Susan; Toland, Amanda E.; Yannoukakos, Drakoulis; Shen, Chen-Yang; Wu, Pei-Ei; Yu, Jyh-Cherng; Hou, Ming-Feng; Swerdlow, Anthony; Ashworth, Alan; Orr, Nick; Jones, Michael; Pita, Guillermo; Alonso, M. Rosario; Álvarez, Nuria; Herrero, Daniel; Tessier, Daniel C.; Vincent, Daniel; Bacot, Francois; Luccarini, Craig; Baynes, Caroline; Ahmed, Shahana; Healey, Catherine S.; Brown, Melissa A.; Ponder, Bruce A.J.; Chenevix-Trench, Georgia; Thompson, Deborah J.; Edwards, Stacey L.; Easton, Douglas F.; Dunning, Alison M.; French, Juliet D.
  • Generation of Antigenic Diversity in Plasmodium falciparum by Structured Rearrangement of Var Genes During Mitosis. (2014) Claessens, Antoine; Hamilton, William L; Kekre, Mihir; Otto, Thomas D; Faizullabhoy, Adnan; Rayner, Julian C; Kwiatkowski, Dominic
    • 2015
  • Staphylococcus Aureus BSAC study data. (2015) Reuter, Sandra; Török, M. Estée; Holden, Matthew T.G.; Reynolds, Rosy; Raven, Kathy E.; Blane, Beth; Donker, Tjibbe; Bentley, Stephen D.; Aanensen, David M.; Grundmann, Hajo; Feil, Edward J.; Spratt, Brian G.; Parkhill, Julian; Peacock, Sharon
    • 1 January 2016
  • Mycobacterium tuberculosis Nonthaburi genotype raw reads. (2016) Coker, Olabisi Oluwabukola; Chaiprasert, Angkana; Ngamphiw, Chumpol; Tongsima, Sissades; Regmi, Sanjib Mani; Clark, Taane; Ong, Rick Twee Hee; Teo, Yik-Ying; Prammananan, Therdsak; Palittapongarnpim, Prasit
    • 12 January 2016
  • Whole-genome sequencing reveals transmission of vancomycin-resistant Enterococcus faecium in a healthcare network. (2016) Brodrick, Hayley J.; Raven, Kathy E.; Harrison, Ewan M.; Blane, Beth; Reuter, Sandra; Török, M. Estée; Parkhill, Julian; Peacock, Sharon description
    • 4 February 2016
  • Assessing within-woman changes in mammographic density: a comparison of fully versus semi-automated area-based approaches. (2016) Busana, Marta; De Stavola, Bianca; Sovio, Ulla; Li, Jingmei; Moss, Sue; Humphreys, Keith; dos Santos Silva, Isabel
    • 1 March 2016
  • P. knowlesi DHFR sequence data. (2016) Tsuboi, Takafumi; Grigg, Matthew; Barber, Bridget E.; Marfurt, Jutta; Imwong, Mallika; William, Timothy; Bird, Elspeth; Piera, Kim A.; Aziz, Ammar; Boonyuen, Usa; Drakeley, Chris; Cox, Jonathan; White, Nicholas J.; Cheng, Qin; Yeo, Tsin W.; Auburn, Sarah; Anstey, Nicholas M. description
    • 18 May 2016
  • Host Immune Responses Differ between M. africanum- and M. tuberculosis-Infected Patients following Standard Anti-tuberculosis Treatment. (2016) Tientcheu, Leopold; Haks, Mariëlle C.; Agbla, Schadrac; Sutherland, Jayne; Adetifa, Ifedayo; Donkor, Simon; Quinten, Edwin; Daramy, Mohammed; Antonio, Martin; Kampmann, Beate; Ottenhoff, Tom H. M.; Dockrell, Hazel; Ota, Martin O.
    • 24 May 2016
  • Files for "Evolution and epidemiology of multidrug resistant Klebsiella pneumoniae in the UK and Ireland". (2016) Moradigaravand, Danesh; Martin, Veronique; Peacock, Sharon J.; Parkhill, Julian
    • 5 July 2016
  • Genome-scale comparison of expanded gene families in Plasmodium ovale wallikeri and Plasmodium ovale curtisi with Plasmodium malariae and with other Plasmodium species. (2016) Ansari, Hifzur Rahman; Templeton, Thomas J.; Subudhi, Amit Kumar; Ramaprasad, Abhinay; Tang, Jianxia; Lu, Feng; Naeem, Raeece; Hashish, Yasmeen; Oguike, Mary C.; Benavente, Ernest Diez; Clark, Taane G.; Sutherland, Colin J.; Barnwell, John W.; Culleton, Richard; Cao, Jun; Pain, Arnab
    • 7 July 2016
  • Molecular Characterization of Cryptosporidium Species and Giardia duodenalis from Symptomatic Cambodian Children. (2016) Moore, Catrin E.; Elwin, Kristin; Phot, Nget; Seng, Chanthou; Mao, Saroeun; Suy, Kuong; Kumar, Varun; Nader, Johanna; Bousfield, Rachel; Perera, Sanuki; Bailey, J. Wendi; Beeching, Nicholas J.; Day, Nicholas P. J.; Parry, Christopher M.; Chalmers, Rachel M.
    • August 2016
  • Dataset for: Defining seropositivity thresholds for use in trachoma elimination studies. (2016) Migchelsen, Stephanie
    • 16 November 2016
  • Experimental hut data. (2016) N'guessan, Raphael; Odjo, Abibatou; Ngufor, Corine; Malone, David; Rowland, Mark grid_on
    • 26 December 2016
  • The Campylobacter jejuni Oxidative Stress Regulator RrpB Is Associated with a Genomic Hypervariable Region and Altered Oxidative Stress Resistance. (2016) Gundogdu, Ozan; Da Silva, Daiani Teixeira; Mohammad, Banaz; Elmi, Abdi; Wren, Brendan W.; van Vliet, Arnoud H. M.; Dorrell, Nick
    • 24 January 2017
  • Whole genome sequencing reveals high-resolution epidemiological links between clinical and environmental Klebsiella pneumoniae. (2017) Runcharoen, Chakkaphan; Moradigaravand, Danesh; Blane, Beth; Paksanont, Suporn; Thammachote, Jeeranan; Anun, Suthatip; Parkhill, Julian; Chantratita, Narisara; Peacock, Sharon J.
    • 31 January 2017
  • Measuring high-sensitivity cardiac troponin T blood concentration in population surveys. (2017) Lazzarino, Antonio Ivan; Mindell, Jennifer S.
    • 8 February 2017
  • Primary macrophages and J774 cells respond differently to infection with Mycobacterium tuberculosis. (2017) Andreu, Nuria; Phelan, Jody; de Sessions, Paola F; Cliff, Jackie M.; Clark, Taane; Hibberd, Martin
    • 1 March 2017
  • TUMIKIA Project Laboratory Kato-Katz Forms. (2017) Oswald, William; Witek-McManus, Stefan
    • 6 March 2017
  • Preservation of Tetherin and CD4 Counter-Activities in Circulating Vpu Alleles despite Extensive Sequence Variation within HIV-1 Infected Individuals. (2017) Pickering, Suzanne; Hue, Stephane; Kim, Eun-Young; Reddy, Susheel; Wolinsky, Steven M.; Neil, Stuart J. D.
    • 22 December 2017
  • Quantification of huntingtin protein species in Huntington’s disease patient leukocytes using optimised electrochemiluminescence immunoassays. (2017) Hensman Moss, Davina J.; Robertson, Nicola; Farmer, Ruth; Scahill, Rachael I.; Haider, Salman; Tessari, Michela A.; Flynn, Geraldine; Fischer, David F.; Wild, Edward J.; Macdonald, Douglas; Tabrizi, Sarah J.
    • 5 February 2018
  • Data for: "Clinical signs of trachoma are prevalent among Solomon Islanders who have no persistent markers of prior infection with Chlamydia trachomatis". (2018) Butcher, Robert html
    • 8 April 2018
  • Klebsiella ecology and genome plasticity compared to E. coli and Gram negative ESKAPE pathogens. (2018) Holt, Kathryn E.; Wyres, Kelly
    • 27 April 2018
  • Diversity in gene expression profiles captured through highly resolved whole-transcriptome profiling of clinical and laboratory-adapted malaria parasite isolates. (2018) Tarr, Sarah J.; Conway, David J.
    • 2 August 2018
  • Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates. (2018) Palittapongarnpim, Prasit; Ajawatanawong, Pravech; Viratyosin, Wasna; Smittipat, Nat; Disratthakit, Areeya; Mahasirimongkol, Surakameth; Yanai, Hideki; Yamada, Norio; Nedsuwan, Supalert; Imasanguan, Worarat; Kantipong, Pacharee; Chaiyasirinroje, Boonchai; Wongyai, Jiraporn; Toyo-oka, Licht; Phelan, Jody; Parkhill, Julian; Clark, Taane G.; Hibberd, Martin L.; Ruengchai, Wuthiwat; Palittapongarnpim, Panawun; Juthayothin, Tada; Tongsima, Sissades; Tokunaga, Katsushi
    • 28 August 2018
  • Plasmodium knowlesi SWGA in clinical isolates. (2018) London School of Hygiene & Tropical Medicine
    • 1 September 2018
  • Data from: Examining the human infectious reservoir for Plasmodium falciparum malaria in areas of differing transmission intensity. (2018) Gonçalves, Bronner P.; Kapulu, Melissa C.; Sawa, Patrick; Guelbéogo, Wamdaogo M.; Tiono, Alfred B.; Grignard, Lynn; Stone, Will J. R.; Hellewell, Joel; Lanke, Kjerstin; Bastiaens, Guido J. H.; Bradley, John; Nébié, Issa; Ngoi, Joyce M.; Oriango, Robin; Mkabili, Dora; Nyaurah, Maureen; Midega, Janet; Wirth, Dyann F.; Marsh, Kevin; Churcher, Thomas S.; Bejon, Philip; Sirima, Sodiomon B.; Drakeley, Chris; Bousema, Teun
    • 12 October 2018
  • S1 Data File for: "Characterising antibody avidity in individuals of varied Mycobacterium tuberculosis infection status using surface plasmon resonance". (2018) Scriba, Thomas J.; Kimuda, Simon G.; Biraro, Irene Andia; Bagaya, Bernard S.; Raynes, John G.; Cose, Stephen
    • 22 January 2019
  • ETAPLAT dataset. (2019) Dallaku, Kastriot; Mansmann, Ultrich; Shakur-Still, Haleema; Roberts, Ian; Delius, Maria Veronika; Siegmund, Braun; Gliozheni, Orion; Tasha, Ilir; Cenameri, Saimir
    • 12 August 2019
  • Adaptation of host transmission cycle during Clostridium difficile speciation. (2019) Kumar, Nitin; Browne, Hilary P.; Viciani, Elisa; Forster, Samuel C.; Clare, Simon; Harcourt, Katherine; Stares, Mark D.; Dougan, Gordon; Fairley, Derek J.; Roberts, Paul; Pirmohamed, Munir; Clokie, Martha R. J.; Jensen, Mie Birgitte Frid; Hargreaves, Katherine R.; Ip, Margaret; Wieler, Lothar H.; Seyboldt, Christian; Norén, Torbjörn; Riley, Thomas V.; Kuijper, Ed J.; Wren, Brendan W.; Lawley, Trevor D.
    • 23 September 2019
  • Comparing antimicrobial resistance prediction pipelines from bacterial whole genome sequencing data: An inter-laboratory study. (2019) London School of Hygiene & Tropical Medicine
    • 22 October 2019
  • Diagnostics development for the neglected parasitic diseases strongyloidiasis and visceral leishmaniasis. (2019) Marlais, Tegwen
    • 18 December 2019
  • Longitudinal gene expression dataset [The immuno-pathogenesis of progressive scarring trachoma: results of a four-year longitudinal study in Tanzanian children]. (2019) Derrick, Tamsyn
    • 16 January 2020
  • Data for, "Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from south and southeast Asia.". (2020) Wyres, Kelly L.; Nguyen, To N. T.; Lam, Margaret M. C.; Judd, Louise M.; van Vinh Chau, Nguyen; Dance, David A. B.; Ip, Margaret; Karkey, Abhilasha; Ling, Clare L.; Miliya, Thyl; Newton, Paul N.; Lan, Nguyen Phu Huong; Sengduangphachanh, Amphone; Turner, Paul; Veeraraghavan, Balaji; Vinh, Phat Voong; Vongsouvath, Manivanh; Thomson, Nicholas R.; Baker, Stephen; Holt, Kathryn E.
    • 21 January 2020
  • The Plasmodium falciparum artemisinin susceptibility-associated AP-2 adaptin mu subunit is clathrin-independent and essential for schizont-maturation v2.0. (2020) Sutherland, Colin; Henrici, Ryan
    • 15 June 2020
  • Additional file 2 of Molecular detection of drug resistant polymorphisms in Plasmodium falciparum isolates from Southwest, Nigeria. (2020) Tola, Monday; Ajibola, Olumide; Idowu, Emmanuel Taiwo; Omidiji, Olusesan; Awolola, Samson Taiwo; Amambua-Ngwa, Alfred
    • 14 August 2020
  • Enhanced Zika virus susceptibility of globally invasive Aedes aegypti populations. (2020) Aubry, Fabien; Dabo, Stéphanie; Manet, Caroline; Filipovic, Igor; Rose, Noah H.; Miot, Elliott F.; Martynow, Daria; Baidaliuk, Artem; Merkling, Sarah H.; Dickson, Laura B.; Crist, Anna B.; Anyango, Victor O.; Romero-vivas, Claudia M.; Vega-Rua, Anubis; Dusfour, Isabelle; Jiolle, Davy; Paupy, Christophe; Mayanja, Martin N.; Lutwama, Julius J.; Kohl, Alain; Duong, Veasna; Ponlawat, Alongkot; Sylla, Massamba; Akorli, Jewelna; Otoo, Sampson; Lutomiah, Joel; Sang, Rosemary; Mutebi, John-Paul; Cao-Lormeau, Van-Mai; Jarman, Richard G.; Diagne, Cheikh T.; Faye, Oumar; Faye, Ousmane; Sall, Amadou A.; McBride, Carolyn S.; Montagutelli, Xavier; Rasic, Gordana; Lambrechts, Louis
    • 18 September 2020
  • Transmission analysis of a large TB outbreak in London: a mathematical modelling study using genomic data. (2020) Xu, Yuanwei; Stockdale, Jessica E; Naidu, Vijay; Hatherell, Hollie; Stimson, James; Stagg, Helen R; Abubakar, Ibrahim; Colijn, Caroline
    • 22 October 2020
  • RNAseq from nasopharyngeal swab RNA prior to intranasal live attenuated influenza vaccine in children (human). (2020) MRC Unit The Gambia at LSHTM
    • 14 January 2021
  • National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Biological Data: Secure Access. (2021) NatCen Social Research; London School of Hygiene & Tropical Medicine; Russell, M.; Senior, M.
    • 15 January 2021
  • RISK11 signature scores for the biomarker-guided tuberculosis preventive therapy (CORTIS) randomised controlled trial. (2021) Scriba, Thomas J; Fiore-Gartland, Andrew; Penn-Nicholson, Adam; Mulenga, Humphrey; Kimbung Mbandi, Stanley; Borate, Bhavesh; Mendelsohn, Simon C; Hadley, Katie; Hikuam, Chris; Kaskar, Masooda; Musvosvi, Munyaradzi; Bilek, Nicole; Self, Steven; Sumner, Tom; White, Richard G; Erasmus, Mzwandile; Jaxa, Lungisa; Raphela, Rodney; Innes, Craig; Brumskine, William; Hiemstra, Andriëtte; Malherbe, Stephanus T; Hassan-Moosa, Razia; Tameris, Michèle; Walzl, Gerhard; Naidoo, Kogieleum; Churchyard, Gavin; Hatherill, Mark
    • 28 January 2021
  • Molecular characterisation of Crimean-Congo haemorrhagic fever virus detected in African blue ticks feeding on cattle in a Ugandan abattoir. (2021) Stubbs, Samuel CB
    • 2 February 2021
  • E-MTAB-8835 - Ribosome profiling of Mycobacterium tuberculosis under nutrient starvation. (2021) Cortes, Teresa
    • 7 April 2021
  • Table S2. from Evidence for natural hybridization and novel Wolbachia strain superinfections in the Anopheles gambiae complex from Guinea. (2021) Jeffries, Claire L.; Cansado-Utrilla, Cintia; Beavogui, Abdoul H.; Stica, Caleb; Lama, Eugene Kaman; Kristan, Mojca; Irish, Seth R.; Walker, Thomas
    • 4 May 2021
  • Sequencing of M/XDR isoaltes from Pakistan. (2021) London School of Hygiene & Tropical Medicine
    • 7 May 2021
  • Supporting data for "chiA and gbpA genes are not uniformly distributed amongst diverse Vibrio cholerae". (2021) Fennell, Thea G.; Blackwell, Grace A.; Thomson, Nicholas R.; Dorman, Matthew J.
    • 25 June 2021
  • Images of selected cells of the TbGOS02 recombinant Trypanosoma brucei brucei cell line. (2021) Borg, Yanika; Alsford, Sam; Zaikin, Alexey; Nesbeth, Darren
  • Sequence of the UbeK trypanosomal degron. (2021) Borg, Yanika; Alsford, Sam; Zaikin, Alexey; Nesbeth, Darren
    • 26 July 2021
  • KamTan/MediationSimulation. (2021) Tanner, Kamaryn T; Sharples, Linda D; Daniel, Rhian M; Keogh, Ruth H
  • The RAG1 N-terminal region regulates the efficiency and pathways of synapsis for V(D)J recombination. (2021) Beilinson, HA; Yadavalli, AD; Xiao, J; Corbett, Liz; Saribasak, H; Schatz, DG
    • 2 November 2021
  • C. difficle p-cresol production. (2021) Lynham, Steven; Dawson, Lisa
    • 23 November 2021
  • Summary statistics for association tests between human and Plasmodium falciparum genetic variants in 3,346 severe malaria cases from The Gambia and Kenya. (2021) Band, Gavin; Leffler, Ellen M.; Jallow, Muminatou; Sisay-Joof, Fatoumatta; Ndila, Carolyne M.; Macharia, Alexander W.; Hubbart, Christina; Jeffreys, Anna E.; Rowlands, Kate; Nguyen, Thuy; Goncalves, Sonia M.; Ariani, Cristina V.; Stalker, Jim; Pearson, Richard D.; Amato, Roberto; Drury, Eleanor; Sirugo, Giorgio; D'Alessandro, Umberto; Bojang, Kalifa A.; Marsh, Kevin; Peshu, Norbert; Conway, David J.; Williams, Thomas N.; Rockett, Kirk A.; Kwiatkowski, Dominic P.
    • 24 November 2021
  • Sample accession list for "Malaria protection due to sickle haemoglobin depends on parasite genotype". (2021) Band, Gavin; Leffler, Ellen M.; Jallow, Muminatou; Sisay-Joof, Fatoumatta; Ndila, Carolyne M.; Macharia, Alexander W.; Hubbart, Christina; Jeffreys, Anna E.; Rowlands, Kate; Nguyen, Thuy; Goncalves, Sonia M.; Ariani, Cristina V.; Stalker, Jim; Pearson, Richard D.; Amato, Roberto; Drury, Eleanor; Sirugo, Giorgio; D'Alessandro, Umberto; Bojang, Kalifa A.; Marsh, Kevin; Peshu, Norbert; Conway, David J.; Williams, Thomas N.; Rockett, Kirk A.; Kwiatkowski, Dominic P.
    • 30 January 2022
  • Additional file 1 of Impact of intra-partum azithromycin on carriage of group A streptococcus in the Gambia: a posthoc analysis of a double-blind randomized placebo-controlled trial. (2022) Jagne, Isatou; Keeley, Alexander J.; Bojang, Abdoulie; Camara, Bully; Jallow, Edrissa; Senghore, Elina; Oluwalana, Claire; Bah, Saikou Y.; Turner, Claire E.; Sesay, Abdul Karim; D’alessandro, Umberto; Bottomley, Christian; De silva, Thushan I.; Roca, Anna
    • 3 February 2022
  • F6 M. tb knock out mutant Vs wildtype after 24hrs starvation in PBS Tyloxapol. (2022) Houghton, Joanna
    • 7 February 2022
  • Skin microbiome alters attractiveness to Anopheles mosquitoes. (2022) Showering, Alicia
    • 17 March 2022
  • A. baumannii vaccination response. (2022) London School of Hygiene & Tropical Medicine
    • 27 April 2022
  • Campylobacter coli strain, whole genome shotgun sequencing project. (2022) Lehri, Burhan; Navoly, G; Willcocks, Sam; Huong, LQ; Stabler, Richard A
    • 12 May 2022
  • CDC50 interacting partners of Plasmodium falcipraum. (2022) London School of Hygiene & Tropical Medicine
    • 17 May 2022
  • Population genetic analysis of Plasmodium knowlesi reveals differential selection and exchange events between Borneo and Peninsular sub-populations. (2022) London School of Hygiene & Tropical Medicine
    • 22 May 2022
  • Measles virus genomes in Uganda. (2022) MRC/UVRI & LSHTM Uganda Research Unit
    • 7 June 2022
  • APCDR AGV Baganda. (2022) Uganda Medical Informatics Centre
  • APCDR AGV Project: Low depth (4x) sequence data from an Ugandan population (BAMs). (2022) Uganda Medical Informatics Centre
  • APCDR Uganda GWAS - High depth sequencing of a Baganda trio. (2022) Uganda Medical Informatics Centre
    • 20 July 2022
  • Aedes_IR. (2022) London School of Hygiene & Tropical Medicine
    • 17 October 2022
  • Additional file 3 of Characterisation of ethnic differences in DNA methylation between UK-resident South Asians and Europeans. (2022) Elliott, Hannah R.; Burrows, Kimberley; Min, Josine L.; Tillin, Therese; Mason, Dan; Wright, John; Santorelli, Gillian; Davey Smith, George; Lawlor, Deborah A.; Hughes, Alun D.; Chaturvedi, Nishi; Relton, Caroline L.
    • 2 November 2022
  • Campylobacter jejuni interactions with Acanthamoeba castellanii. (2022) Nasher, Fauzy; Lehri, Burhan; Horney, Megan; Stabler, Richard; Wren, Brendan W
    • 7 February 2023
  • Evaluation of MALDI-TOF MS for molecular typing of Acinetobacter baumannii in comparison with orthogonal methods. (2023) London School of Hygiene & Tropical Medicine
    • 9 February 2023
  • Global Typhoid Genomics Consortium 2022 - Genome Assemblies. (2023) Holt, Kathryn E.
    • 10 March 2023
  • Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study. (2023) London School of Hygiene & Tropical Medicine
    • 6 May 2023
  • Targeted Amplicon Sequencing of Brazilian Anopheles darlingi. (2023) London School of Hygiene and Tropical Medicine
    • 6 November 2023
  • PANGEA-HIV/PANGEA-Sequences: v1.0.0. (2023) PANGEA-HIV Consortium
    • 30 November 2023
  • Data for: "Genomic diversity and antimicrobial resistance in clinical Klebsiella pneumoniae isolates from tertiary hospitals in Southern Ghana". (2023) London School of Hygiene & Tropical Medicine
    • 16 January 2024
  • Dataset of 569 metagenome-assembled genomes from the caeca of multiple chicken breeds from commercial and backyard farming setups of Pakistan. (2024) Saleem, Farrukh; Ameer, Aqsa; Keating, Ciara; Gundogdu, Ozan; Javed, Sundus; Ijaz, Umer Zeeshan
    • 21 February 2024
  • WGS of Ethiopian Anopheles Stephensi. (2024) London School of Hygiene & Tropical Medicine
    • 27 February 2024
  • ATLopezJimenez/Toolset-high-content-analysis-of-Shigella-infection. (2024) López-jiménez, Ana Teresa
  • Anopheles gambiae Bijagos 2022 WGS. (2024) London School of Hygiene & Tropical Medicine
    • 18 March 2024
  • High-content high-resolution microscopy and deep learning assisted analysis reveals host and bacterial heterogeneity during Shigella infection. (2024) López-Jiménez, Ana Teresa; Brokatzky, Dominik; Pillay, Kamla; Williams, Tyrese; Özbaykal Güler, Gizem; Mostowy, Serge
    • 21 May 2024
  • Data supporting “The effect of current helminth infection on vaccine responses among adolescents living in helminth-endemic islands of Lake Victoria, Uganda”. (2024) Natukunda, Agnes; Zirimenya, Ludoviko; Nkurunungi, Gyaviira; Nassuna, Jacent; Elliott, Alison M.; Webb, Emily description
    • 7 June 2024
  • WGS An melas Bijagos Guinea Bissau. (2024) London School of Hygiene & Tropical Medicine
    • 21 June 2024
  • Source data for: "Dynamics of Trypanosoma cruzi infection in hamsters and novel association with progressive motor dysfunction". (2024) Langston, Harry; Fortes Francisco, Amanda; Doidge, Ciaran; Roberts, Chrissy H; Khan, Archie A; Jayawardhana, Shiromani; Taylor, Martin C; Kelly, John M; Lewis, Michael D
    • 24 June 2024
  • Replication Data for: Evaluation of population immunity against SARS-CoV-2 variants, EG.5.1, FY.4, BA.2.86, JN.1, and JN.1.4, using samples from two health demographic surveillance systems in Kenya. (2024) Lugano, Doreen; Kutima, Bernadette; Kimani, Makobu; Sigilai, Antipa; Gitonga, John; Karani, Angela; Akech, Donald; Karia, Boniface; Ziraba, Abdhalah K.; Maina, Angela; Lambisia, Arnold; Omuoyo, Donwilliams; Mugo, Daisy; Lucinde, Ruth; Owuor, Sharon; Konyino, Gloria; Newman, Joseph; Bailey, Dalan; Nduati, Eunice; Githinji, George; Agoti, Charles N.; Bejon, Philip; Scott, J. Anthony G.; Agweyu, Ambrose; Kagucia, Wangeci; Warimwe, George M.; Sande, Charles; Ochola-Oyier, Lynette I.; Nyagwange, James
    • 28 June 2024
  • Effect of intra-partum azithromycin on gut microbiome development in early childhood. (2024) Medical Research Council Unit The Gambia at LSHTM
    • 9 July 2024
  • Data for: Laboratory evaluation of the regeneration time, efficacy and wash-resistance of PermaNet® Dual (a deltamethrin-chlorfenapyr net) against susceptible and pyrethroid-resistant strains of Anopheles gambiae sensu lato. (2024) Syme, Thomas; N'dombidje, Boris; Todjinou, Damien; Ariori, Victoria; Ngufor, Corine grid_on
    • 18 July 2024
  • BonoboFlow: Streamlined Viral Genome Assembly and Haplotype Reconstruction from Nanopore Reads. (2024) MRC/UVRI & LSHTM Uganda Research Unit
    • 9 August 2024
  • Multimodal mucosal and systemic immune characterization of a non-human primate trachoma model highlights the critical role of local immunity during acute phase disease. (2024) Paulet, Elodie; Contreras, Vanessa; Galhaut, Mathilde; Rosenkrands, Ida; Holland, Martin; Burton, Matthew J.; Dietrich, Jes; Gallouët, Anne-Sophie; Bosquet, Nathalie; Relouzat, Françis; Langlois, Sébastien; Follmann, Frank; Le Grand, Roger; Labetoulle, Marc; Rousseau, Antoine
    • 15 August 2024
  • Additional file 4 of Time of exposure and assessment influence the mortality induced by insecticides against metabolic resistant mosquitoes. (2024) Odufuwa, Olukayode G.; Bradley, John; Ngonyani, Safina; Mpelepele, Ahmadi Bakari; Matanila, Isaya; Muganga, Joseph B.; Bosselmann, Rune; Skovmand, Ole; Mboma, Zawadi Mageni; Moore, Sarah Jane
    • 23 August 2024
  • Impact of commercial gut health interventions on caecal metagenome and broiler performance. (2024) London School of Hygiene & Tropical Medicine
    • 27 September 2024
  • Targeted sequencing of Plasmodium falciparum isolates from human blood and infected mosquitoes from Mali. (2024) London School of Hygiene & Tropical Medicine
    • 26 November 2024
  • TnSEQ analysis measuring fitness costs of insertions in the M. bovis AF2122/97 genome under oxidative stress. (2024) Stiens, Jennifer; Passmore, Ian J.; Nobeli, Irene; Kendall, Sharon
    • 28 January 2025
  • Additional file 2 of A new method for detecting mixed Mycobacterium tuberculosis infection and reconstructing constituent strains provides insights into transmission. (2025) Sobkowiak, Benjamin; Cudahy, Patrick; Chitwood, Melanie H.; Clark, Taane G.; Colijn, Caroline; Grandjean, Louis; Walter, Katharine S.; Crudu, Valeriu; Cohen, Ted
    • 30 January 2025
  • Impact of commercial gut health interventions on caecal metagenome and broiler performance. (2025) Pangga, Gladys Maria; Star-Shirko, Banaz; Psifidi, Androniki; Xia, Dong; Corcionivoschi, Nicolae; Kelly, Carmel; Hughes, Callie; Lavery, Ursula; Richmond, Anne; Ijaz, Umer Zeeshan; Gundogdu, Ozan
    • 10 March 2025
  • Exploring interrelationships between structural, social, and biological determinants of vaccine impact in Kenya and Uganda: VAnguard community mixed methods study protocol. (2025) Zirimenya, Ludoviko
    • 9 April 2025
  • Rapid bacterial identification and resistance detection using a low complexity molecular diagnostic platform in Zimbabwe - Study dataset and codebook. (2025) Mwaturura, Tinashe; Olaru, Ioana D.; Chimhini, Gwendoline; Bwakura-Dangarembizi, Mutsa; Mangiza, Marcia; Chimhuya, Simbarashe; Sado, Belinda; Katunga, Jackie; Tarupiwa, Andrew; Juru, Agnes; Mashe, Tapfumaneyi; Pasi, Christopher; Chuchu, Veronicah; Gansallo, Seyi; Gleeson, Birgitta; Fitzgerald, Felicity; Ferreyra, Cecilia; Kranzer, Katharina
    • 15 April 2025
  • Optimization and Characterization of N-Acetamide Indoles as Antimalarials That Target PfATP4. (2025) Awalt, Jon Kyle; Ooi, Zi Kang; Ashton, Trent D.; Mansouri, Mahta; Calic, Petar P. S.; Zhou, Qingmiao; Vasanthan, Santhya; Lee, Serena; Loi, Katie; Jarman, Kate E.; Penington, Jocelyn S.; Qiu, Deyun; Zhang, Xinxin; Lehane, Adele M.; Mao, Emma Y.; Gancheva, Maria R.; Wilson, Danny W.; Giannangelo, Carlo; MacRaild, Christopher A.; Creek, Darren J.; Yeo, Tomas; Sheth, Tanaya; Fidock, David A.; Churchyard, Alisje; Baum, Jake; Famodimu, Mufuliat T.; Delves, Michael J.; Kristan, Mojca; Stewart, Lindsay; Sutherland, Colin J.; Coyle, Rachel; Jagoe, Hannah; Lee, Marcus C. S.; Chowdury, Mrittika; de Koning-Ward, Tania F.; Baud, Delphine; Brand, Stephen; Jackson, Paul F.; Cowman, Alan F.; Dans, Madeline G.; Sleebs, Brad E.
    • 21 April 2025
  • Dataset for the "Evaluation of the diagnostic accuracy of the ReLASV Pan-Lassa Antigen Rapid Test for Lassa Fever in Nigeria". (2025) Chi, Hanesh F.; Etafo, Johnson; Fonkeng, Fritz; Olufunke, Gbenga-Ayeni; Ireneh, Ronke; Abejegah, Chukwuyem; Owhin, Sampson; Bausch, Daniel G.; Vessiere, Aurelia; Agogo, Emmanuel; Emperador, Devy M.; Nelson, Adedosu A.
    • 16 July 2025
  • Convergent evolution of artemisinin and chloroquine resistance in Ethiopian Plasmodium falciparum parasites. (2025) Letebo, Alemayehu; Vanheer, Leen N.; Engdaw, Mengst; Alemayehu, Dawit Hailu; Deressa, Jimma Dinsa; Adnew, Bethlehem; Ayele, Abaysew; Keffale, Migbaru; Demisse, Mulugeta; Seyoum, Tamrayehu; Shiferaw, Meklit; Sime, Heven; Gebreegziabxier, Atsbeha; Shimelash, Amanuel; Tafa, Elias B.; Chali, Wakweya; Alemayehu, Lina; Kassa, Fikregabrail Aberra; Zeleke, Ayalew Jejaw; Hamza, Tajudin Abdurhaman; Tamirat, Abel Beliyu; Misganaw, Tadesse; Bogale, Alayu; Abriham, Zufan Yiheyis; Nasir, Yasin; Jebessa, Gutema; Ejigu, Legesse Alamerie; Yohannes, Metmiku; Kebede, Betelhem Akililu; Ayele, Matiwos Kidane; Abdo, Melat; Habtamu, Getinet; Gizat, Addisu; Phelan, Jody; Matlock, Bryce; Fidock, David A.; Campino, Susana; Assefa, Ashenafi; Koepfli, Cristian; Massebo, Fekadu; Tadesse, Fitsum G.
    • 17 August 2025
  • Investigating microbial population structure and function in the chicken caeca and large intestine over time using metagenomics. (2025) Star-Shirko, Banaz; Pangga, Gladys Maria; McKenna, Aaron; Corcionivoschi, Nicolae; Richmond, Anne; Ijaz, Umer Zeeshan; Gundogdu, Ozan