ATLopezJimenez/Toolset-high-content-analysis-of-Shigella-infection

This repository holds ImageJ macros, python code and trained CNN models developped by Ana Teresa López Jiménez in Serge Mostowy's lab (London School of Hygiene and Tropical Medicine). They were used to identify and analyse SEPT7 recruitment to Shigella flexneri as presented in the preprint submitted for peer-review: "High-content high-resolution microscopy and deep learning assisted analysis reveals host and bacterial heterogeneity during Shigella infection". Ana T. López-Jiménez, Dominik Brokatzky, Kamla Pillay, Tyrese Williams, Gizem Özbaykal Güler and Serge Mostowy (2024)

Keywords

Shigella infection