Adaptation of host transmission cycle during Clostridium difficile speciation

Kumar, N; Browne, HP; Viciani, E; Forster, SC; Clare, S; Harcourt, K; Stares, MD; Dougan, G; Fairley, DJ; Roberts, P; Pirmohamed, M; Clokie, MRJ; Jensen, MBF; Hargreaves, KR; Ip, M; Wieler, LH; Seyboldt, C; Norén, T; Riley, TV; Kuijper, EJ; Wren, BWORCID logo and Lawley, TD (2019). Adaptation of host transmission cycle during Clostridium difficile speciation. [Dataset]. Nature Genetics. https://doi.org/10.1038/s41588-019-0478-8
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Genomes have been deposited in the European Nucleotide Archive. Accession codes are listed in Supplementary Table 1. The 13 C. difficile reference isolates (Supplementary Table 2) are publicly available from the NCTC and the annotation of these genomes are available from the Host-Microbiota Interactions Laboratory (HMIL; www.lawleylab.com), Wellcome Sanger Institute.

Keywords

Bacterial species; Genetic adaptations; Clostridium difficile

Item Type Dataset
Resource Type
Resource Type
Resource Description
Dataset
Quantitative
Capture method Experiment: Laboratory
Date 12 August 2019
Language(s) of written materials English
Creator(s) Kumar, N; Browne, HP; Viciani, E; Forster, SC; Clare, S; Harcourt, K; Stares, MD; Dougan, G; Fairley, DJ; Roberts, P; Pirmohamed, M; Clokie, MRJ; Jensen, MBF; Hargreaves, KR; Ip, M; Wieler, LH; Seyboldt, C; Norén, T; Riley, TV; Kuijper, EJ; Wren, BWORCID logo and Lawley, TD
LSHTM Faculty/Department Faculty of Infectious and Tropical Diseases > Administration
Participating Institutions London School of Hygiene & Tropical Medicine, London, United Kingdom
Funders
Project
Funder
Grant Number
Funder URI
UNSPECIFIED
Wellcome Trust
098051
http://dx.doi.org/10.13039/100010269
UNSPECIFIED
Medical Research Council
PF451
http://dx.doi.org/10.13039/501100000265
UNSPECIFIED
National Health and Medical Research Council
1091097
http://dx.doi.org/10.13039/501100000925
UNSPECIFIED
Medical Research Council
MR/K000511/1
http://dx.doi.org/10.13039/501100000265
Date Deposited 25 Feb 2020 11:42
Last Modified 03 Feb 2026 15:06
Publisher Nature Genetics

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