Data Collection

Allel, K, Abou Jaoude, GJ, Birungi, C, Palmer, T, Skordis, J and Haghparast-Bidgoli, H (2022). Technical efficiency of national HIV/AIDS spending in 78 countries between 2010 and 2018: A data envelopment analysis. S1 Data. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0000463.s002

Allel, K, Abou Jaoude, GJ, Birungi, C, Palmer, T, Skordis, J and Haghparast-Bidgoli, H (2022). Technical efficiency of national HIV/AIDS spending in 78 countries between 2010 and 2018: A data envelopment analysis. S2 Data. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0000463.s003

Alonso, S, Vidal, M, Ruiz-Olalla, G, González, R, Manaca, MN, Jairoce, C, Vázquez-Santiago, M, Balcells, R, Vala, A, Rupérez, M, Cisteró, P, Fuente-Soro, L, Cova, M, Angov, E, Nhacolo, A, Sevene, E, Aponte, JJ, Macete, E, Aguilar, R, Mayor, A, Menéndez, C, Dobaño, C and Moncunill, G (2021). Data_Sheet_1_Reduced Placental Transfer of Antibodies Against a Wide Range of Microbial and Vaccine Antigens in HIV-Infected Women in Mozambique. [Data Collection]. Frontiers. https://doi.org/10.3389/fimmu.2021.614246.s001

Anderson, ST, Coin, LJ, Crampin, AC, Dockrell, HM, Eley, B, French, N, Heyderman, RS, Hibberd, ML, Kaforou, M, Kern, F, Langford, PR, Levin, M, Ling, L, Wilkinson, RJ and Wright, VJ (2013). Genome-wide transcriptional profiling of HIV positive and negative adults with active tuberculosis, latent TB infection and other diseases. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE37250

Angkurawaranon, C, Nitsch, D, Larke, N, Rehman, AM, Smeeth, L and Addo, J (2016). Ecological Study of HIV Infection and Hypertension in Sub-Saharan Africa: Is There a Double Burden of Disease? [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0166375.

Asio, J, Watera, C, Namuwenge, N, Kirungi, W, Musinguzi, J, Mugagga, K, Busobozi, R, Tusiime, BJ, Lutalo, T, Mbidde, EK and Kaleebu, P (2020). Population-based monitoring of HIV drug resistance early warning indicators in Uganda: A nationally representative survey following revised WHO recommendations: S1 Data. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0230451.s001

Atukunda, M, Charlebois, E, Byamukama, A, Twinamatsiko, B, Ayebare, M, Mutabazi, A, Akatukwasa, C, Tindimwebwa, W, Asiimwe, A, Arinitwe, E, Nangendo, J, Tumusiime, J, Okello, E, Mutungi, G, Grosskurth, H, Kamya, M, Balzer, L, Lavoy, G and Kabami, J (2024). Data from: Low levels of hypertension screening in HIV care clinics in rural Uganda: a mixed methods study. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.9p8cz8wqg

Bahemuka, U and Abaasa, A (2018). Retention of adults from fishing communities in an HIV vaccine preparedness study in Masaka, Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000912.

Bandason, T, Dauya, E, Dakshina, S, McHugh, G, Chonzi, P, Munyati, S, Weiss, HA, Simms, V, Kranzer, K and Ferrand, RA (2018). Screening tool to identify adolescents living with HIV in a community setting in Zimbabwe: A validation study. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0204891.s001.

Beckwith, P, Tlali, M, Charalambous, S, Churchyard, GJ, Fielding, K, Hoffmann, CJ, Johnson, S, Wood, N, Grant, AD and Karat, AS (2022). Causes and outcomes of admission and investigation of tuberculosis in adults with advanced HIV in South African hospitals: data from the TB Fast Track trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002393.

Blassel, L, Tostevin, A, Villabona-arenas, CJ, Peeters, M, Hue, S and Gascuel, O (2021). Archive of figure generating data. [Data Collection]. PLOS Computational Biology. https://doi.org/10.1371/journal.pcbi.1008873.s007

Brotons, P, Bassat, Q, Lanaspa, M, Henares, D, Perez-Arguello, A, Madrid, L, Balcells, R, Acacio, S, Andres-Franch, M, Marcos, MA, Valero-Rello, A and Muñoz-Almagro, C (2017). Nasopharyngeal bacterial load as a marker for rapid and easy diagnosis of invasive pneumococcal disease in children from Mozambique: Supporting data for the manuscript results. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0184762.s001

Burke, R (2024). Computer Aided Screening for Tuberculosis in Low Resource Environments (CASTLE) trial data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003552.

Burke, R (2024). HIV hospitalisation systematic review data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004347.

Burke, R (2021). rachaelmburke/hivhospital. [Data Collection]. Github. https://github.com/rachaelmburke/hivhospital

Burke, R (2022). rachaelmburke/tbacf. [Data Collection]. Github. https://github.com/rachaelmburke/tbacf

Burkhart Colorado, AS, Lazzaro, A, Preston, C, Nusbacher, N, Boyd, K, Fiorillo, S, Martin, C, Siebert, J and Campbell, T (2023). Differential effects of antiretroviral treatment on immunity and gut microbiome composition in people living with HIV in rural versus urban Zimbabwe. [Data Collection]. Zenodo. https://zenodo.org/records/8346401

Candfield, S, Mukora, R, Monkwe, S, Charalambous, S, Sweeney, S, Grant, AD, Fielding, K and Vassall, A (2018). TB Fast Track patient cost data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000815.

Carter, N, Webb, E, Lebina, L, Motsomi, K, Bosch, Z, Martinson, N and MacPherson, P (2023). Data supporting "Prevalence of subclinical pulmonary tuberculosis and its association with HIV in household contacts of tuberculosis in two South African provinces: analysis of a cluster-randomised trial". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003373.

Chaila, MJ, Mcleod, D, Vermund, SH, Mbolongwe-Thornicroft, M, Mbewe, M, Mubekapi-Musadaidzwa, C, Harper, A, Schaap, A, Floyd, S, Hoddinott, G, Hayes, R, Fidler, S, Ayles, H and Shanaube, K (2024). Assessment of a screening tool to aid home-based identification of adolescents (aged 10–14) living with HIV in Zambia and South Africa: HPTN 071 (PopART) study. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0266573.s001

Chikandiwa, A, Pisa, P, Tamalet, C, Muller, E, Michelow, P, Chersich, MF, Mayaud, P and Delany-moretlwe, S (2019). Prevalent, persistent anal HPV infection and squamous intraepithelial lesions: Findings from a cohort of men living with HIV in South Africa. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0225571

Chimbindi, N, Birdthistle, I, Shahmanesh, M, Osindo, J, Mushati, P, Ondeng’e, K, Zuma, T, Chiyaka, T, Kyegombe, N, Hargreaves, J, Busza, J, Floyd, S and Seeley, J (2018). Translating DREAMS into practice: Early lessons from implementation in six settings. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0208243

Chimukuche, RS, Kawuma, R, Mahapa, N, Mkhwanazi, S, Singh, N, Siva, S, Ruzagira, E and Seeley, J (2022). Additional file 1 of Examining oral pre-exposure prophylaxis (PrEP) literacy among participants in an HIV vaccine trial preparedness cohort study. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.21542043.v1

Choko, A and Corbett, EL (2023). Baseline data for the fishermen’s schistosomiasis and HIV services (FISH) cluster randomized trial in Mangochi, Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003363.

Choko, A, Corbett, E and Fielding, K (2018). Baseline and primary data for the partner-provided HIV self-testing and linkage (PASTAL) adaptive multi-arm multi-stage cluster randomized trial in Blantyre, Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000923.

Choko, A, Webb, E and Corbett, E (2016). Initial Accuracy of HIV Rapid Test Kits Stored in Suboptimal Conditions and Validity of Delayed Reading of Oral Fluid Tests. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.105.

Choko, A, Webb, E and Corbett, L (2015). Uptake, accuracy, safety and linkage into care over two years of promoting annual self-testing for HIV in Blantyre, Malawi: a community-based prospective study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.7.

Cresswell, F and Quinn, C (2021). Neurocognitive outcomes of HIV-associated tuberculous meningitis dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002372.

Davidson, J (2022). Clinical codelist - CPRD Aurum - HIV. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002808.

Davidson, JA, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Gold - HIV. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002695.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD Aurum - Immuosuppressive conditions. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002234.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - CPRD GOLD - Immuosuppressive conditions. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002232.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A, Smeeth, L, Strongman, H and Cadogan, S (2021). Codelists for: "Ethnic differences in the incidence of clinically diagnosed influenza: an England population-based cohort study 2008-2018". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002102.

Davidson, J, Warren-Gash, C, Mcdonald, H, Evans, D and Clay, S (2021). Clinical codelists - Immunosuppression. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002410.

Devries, K and Abramsky, T (2015). The SASA Study: A community mobilisation intervention to prevent violence against women and reduce HIV risk in Kampala, Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.15.

Dodds, C, Keogh, P, Bourne, A, McDaid, L, Squire, C, Weatherburn, P and Young, I (2021). Supplemental material for: The Long and Winding Road: Archiving and Re-Using Qualitative Data from 12 Research Projects Spanning 16 Years. [Data Collection]. SAGE Journals. https://doi.org/10.25384/SAGE.12489428.v1

Doyle, AM, Floyd, S, Baisley, K, Orindi, B, Kwaro, D, Mthiyane, TN, Muuo, S, Shahmanesh, M, Ziraba, A and Birdthistle, I (2018). Who are the male sexual partners of adolescent girls and young women? Comparative analysis of population data in three settings prior to DREAMS roll-out. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0198783

Dziva Chikwari, C (2020). Bridging the Gap in HIV testing and care for children in Zimbabwe (B-GAP). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001798.

Elmes, J, Skovdal, M, Nhongo, K, Ward, H, Campbell, C, Hallett, TB, Nyamukapa, C, White, PJ and Gregson, S (2017). Selected interview transcript quotes from: "A reconfiguration of the sex trade: How social and structural changes in eastern Zimbabwe left women involved in sex work and transactional sex more vulnerable". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0171916.s001

Feasey, H (2022). SCALE prevalence survey. [Data Collection]. Open Science Framework. https://osf.io/eu2xf/

Ferrand, R, Weiss, H, Simms, V, Dauya, E, Bandason, T, McHugh, G and Dakshina, S (2017). ZENITH Adolescent HIV prevalence survey dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.174.

Fielding, K (2019). TB Fast Track dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001531.

Floyd, S, Ayles, H, Schaap, A, Shanaube, K, MacLeod, D, Phiri, M, Griffith, S, Bock, P, Beyers, N, Fidler, S and Hayes, R (2018). Aggregate data for "Towards 90-90: Findings after two years of the HPTN 071 (PopART) cluster-randomized trial of a universal testing-and-treatment intervention in Zambia". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0197904.s005

Floyd, S, Schaap, A, Hensen, B and Mulubwa, C (2018). Dataset for: "Community based distribution of oral HIV self-testing kits in Zambia: a cluster-randomised trial nested in four HPTN 071 (PopART) intervention communities". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000980.

Forbes, H, Bhaskaran, K, Thomas, SL, Smeeth, L, Clayton, T and Langan, S (2014). Clinical code list - HIV codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.155.

Forbes, H and Strongman, H (2019). Covariate Code List - Immunosuppressive disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001138.

Foster, N (2024). nicolacfoster/dcea.ana: ASCENT DCEA. [Data Collection]. Github. https://doi.org/10.5281/zenodo.14336227

Francis, SC, Hou, Y, Baisley, K, Van de wijgert, J, Watson-Jones, D, Ao, TT, Herrera, C, Maganja, K, Andreasen, A, Coulton, GR, Hayes, RJ and Shattock, RJ (2015). Data for: "Immune activation in the female genital tract: Expression profiles of soluble proteins in women at high risk for HIV infection". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.104.

Gombe, B, Streatfield, C, Leal, L, Opio, S, Joseph, S, Weber, J, Hare, J, Kaleebu, P and Serwanga, J (2022). Optimization and validation of an ELISA assay for the determination of antibody responses to CN54gp140 and AIDSVAX BE for use in the Phase IIb PrEPVacc vaccine trial. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0275927.s001

Gourlay, A, Wringe, A, Birdthistle, I, Mshana, G, Michael, D and Urassa, M (2014). "It Is Like That, We Didn't Understand Each Other": Exploring the Influence of Patient-Provider Interactions on Prevention of Mother-To-Child Transmission of HIV Service Use in Rural Tanzania (qualitative data). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.37.

Grant-McAuley, W, Klock, E, Laeyendecker, O, Piwowar-Manning, E, Wilson, E, Clarke, W, Breaud, A, Moore, A, Ayles, H, Kosloff, B, Shanaube, K, Bock, P, Mandla, N, van Deventer, A, Fidler, S, Donnell, D, Hayes, R and Eshleman, SH (2021). Evaluation of multi-assay algorithms for identifying individuals with recent HIV infection: HPTN 071 (PopART). Minimum dataset, seroconverters. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0258644.s004

Gupta-Wright, A (2019). Mortality predictor score in hospitalised patients HIV-associated TB in Africa dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001026.

Gupta-Wright, A (2020). Virological failure, HIV-1 drug resistance, and early mortality in adults admitted to hospital in Malawi: an observational cohort study data set. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001824.

Gómez-Olivé, FX, Thorogood, M, Bocquier, P, Mee, P, Kahn, K, Berkman, L and Tollman, S (2014). Social conditions and disability related to the mortality of older people in rural South Africa: Supplementary Data. [Data Collection]. Oxford University Press. https://doi.org/10.1093/ije/dyu093

Handireketi, N, Timire, C, Shewade, HD, Munemo, E, Nyagupe, C, Chipuka, S, Sisya, L, Dhitima, E and Harries, AD (2019). Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0223597.s003

Hanifa, Y, Fielding, K, Grant, AD and Churchyard, GJ (2016). XPHACTOR Clinical Score dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.204.

Harris, RC, Quaife, M, Weerasuriya, CK, Gomez, GB, Sumner, T, Bozzani, F and White, RG (2021). lshtm-tbmg/natcomms-m72sa: Nat Comms - code. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5793302

Hayes, R, Floyd, S, Schaap, A, Shanaube, K, Bock, P, Sabapathy, K, Griffith, S, Donnell, D, Piwowar-Manning, E, El-Sadr, W, Beyers, N, Ayles, H and Fidler, S (2017). A universal testing and treatment intervention to improve HIV control: One-year results from intervention communities in Zambia in the HPTN 071 (PopART) cluster-randomised trial. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pmed.1002292.

Head, MG, Fitchett, J, Derrick, G, Wurie, FB, Meldrum, J, Kumari, N, Beattie, B, Counts, CJ and Atun, R (2015). Additional file 1: of Comparing research investment to United Kingdom institutions and published outputs for tuberculosis, HIV and malaria: a systematic analysis across 1997–2013. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3626534_D1.v1

Hensen, B, Ayles, H, Mulubwa, C, Floyd, S, Schaap, A, Chiti, B, Phiri, M, Mwenge, L, Simwinga, M, Fidler, S, Hayes, R, Bond, V and Mwinga, A (2019). Community-based distribution of oral HIV self-testing kits: experimental evidence from Zambia. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NGY29G

Herbst, K, Pillay, D, Baisley, K, Barnighausen, T and Dlamini, S (2018). DREAMS baseline study in females aged 15-24 years in rural KwaZulu Natal, South Africa, 2006-2015. [Data Collection]. INDEPTH Network. https://doi.org/10.7796/AHRI.DREAMS.DREAMS.AGYW.Baseline.2018.v1

Herbst, K, Pillay, D, Baisley, K, Barnighausen, T and Koole, O (2018). DREAMS baseline study in young men aged 20-29 years in rural KwaZulu Natal, South Africa, 2006-2015. [Data Collection]. INDEPTH Network. https://doi.org/10.7796/AHRI.DREAMS.DREAMS.Male.Baseline.2018.v1

Iwagami, M and Tomlinson, LA (2020). Clinical codelist - HIV and AIDS read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001683.

Kabudula, C and Rentsch, C (2017). Point-of-contact Interactive Record Linkage (PIRL). [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.998867

Kadia, BM, Dimala, CA, Fongwen, NT and Smith, AD (2021). Additional file 1 of Barriers to and enablers of uptake of antiretroviral therapy in integrated HIV and tuberculosis treatment programmes in sub-Saharan Africa: a systematic review and meta-analysis. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17030642.v1

Kakande, A, Ssemata, AS, Muhumuza, R, Atujuna, M, Abaasa, A, Fox, J, Ndekezi, D, Tshabalala, G, Nematadzira, T, Hornschuh, S, Nomvuyo, M, Ahmed, N, Maluadzi, M, Weiss, H, Seeley, J, Dietrich, JJ, Stranix-Chibanda, L, Webb, E, PrEPVacc Study Group and ITAPS team (2023). Data for: PrEP preference among adolescent boys and young men in three sub-Saharan African countries. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003232.

Kansiime, S, Hansen, C, Hayes, R, Ruzagira, E and PrEPVacc study team (2023). Dataset for: Developing HIV risk prediction tools in four African settings. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003540.

Kansiime, S, Holm Hansen, C, Ruzagira, E, McCormack, S, Hayes, R, Dunn, D and PrEPVacc study team (2024). Data set for: Challenges in estimating the counterfactual placebo HIV incidence rate from a registration cohort: the PrEPVacc trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00004435.

Karat, AS, Omar, T, von Gottberg, A, Tlali, M, Chihota, VN, Churchyard, GJ, Fielding, KL, Johnson, S, Martinson, NA, McCarthy, K, Wolter, N, Wong, EB, Charalambous, S and Grant, AD (2016). Autopsy Prevalence of Tuberculosis and Other Potentially Treatable Infections among Adults with Advanced HIV Enrolled in Out-Patient Care in South Africa: Lesedi Kamoso study data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.122.

Karat, A, Tlali, M, Fielding, K, Charalambous, S, Chihota, VN, Churchyard, GJ, Hanifa, Y, Johnson, S, McCarthy, K, Martinson, NA, Omar, T, Kahn, K, Chandramohan, D and Grant, AD (2016). Measuring mortality due to HIV-associated tuberculosis among adults in South Africa: comparing verbal autopsy, minimally-invasive autopsy, and research data. Data from the Lesedi Kamoso study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.169.

Kaswaswa, K, MacPherson, P, Kumwenda, M, Mpunga, J, Thindwa, D, Nliwasa, M, Mwapasa, M, Odland, J, Tomoka, T, Chipungu, G, Mukaka, M and Corbett, EL (2022). Effect of patient-delivered household contact tracing and prevention for tuberculosis: A household cluster-randomised trial in Malawi. Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.1371/journal.pone.0269219.s002

Katende, A, Nakiyingi, L, Andia-Biraro, I, Katairo, T, Muhumuza, R, Ssemata, AS, Nsereko, C, Semitala, FC and Meya, DB (2022). Antiretroviral therapy initiation and outcomes of hospitalized HIV-infected patients in Uganda - An evaluation of the HIV test and treat strategy. Health care worker interview guide. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0268122.s002

Katende, A, Nakiyingi, L, Andia-Biraro, I, Katairo, T, Muhumuza, R, Ssemata, AS, Nsereko, C, Semitala, FC and Meya, DB (2022). Antiretroviral therapy initiation and outcomes of hospitalized HIV-infected patients in Uganda-An evaluation of the HIV test and treat strategy. Stata data set. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0268122.s001

Kelly, H, Weiss, H, Benavente Moreno, Y, de Sanjose, S and Mayaud, P (2017). Antiretroviral therapy, high-risk human papillomavirus and cervical intraepithelial neoplasia: a systematic review and meta-analysis. [Data Collection]. Mendeley Data. http://dx.doi.org/10.17632/cg8k3d7rc8.1

Kerkhoff, AD, Lawn, S, Schutz, C, Burton, R, Boulle, A, Cobelens, FJ and Meintjes, G (2015). Data for: "Anemia, Blood Transfusion Requirements and Mortality Risk in Human Immunodeficiency Virus-Infected Adults Requiring Acute Medical Admission to Hospital in South Africa". [Data Collection]. Oxford University Press. https://doi.org/10.1093/ofid/ofv173

Kisesa HIV Open Cohort study and ALPHA Network (2022). ALPHA HIV Incidence and Mortality Data, Kisesa 1994-2016. [Data Collection]. DataFirst, Cape Town, South Africa. https://doi.org/10.25828/SGBS-Q698

Kitilya, B, PrayGod, G, Peck, R, Changalucha, J, Jeremiah, K, Kavishe, BB, Friis, H, Filteau, S, Faurholt-Jepsen, D, Krogh-Madsen, R, Brage, S and Olsen, MF (2022). S1 Questionnaire - Levels and correlates of physical activity and capacity among HIV-infected compared to HIV-uninfected individuals. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0262298.s001

Kitonsa, J, Kansiime, S, Kusemererwa, S, Onyango, M, Nayiga, B, Kabarambi, A, Mugisha, J, Kaleebu, P, Ruzagira, E and PrEPVacc Study Group (2023). Data for: Changes in self-reported risky sexual behaviour indicators among adults receiving regular risk reduction counselling and optional initiation of pre-exposure prophylaxis in an HIV vaccine preparedness study in Masaka, Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003403.

Kitonsa, J, Mayanja, Y, Aling, E, Kiwanuka, J, Namutundu, J, Anywaine, Z, Ggayi, A, Kibengo, F, Kiwanuka, N and Kaleebu, P (2019). Factors affecting mortality among HIV positive patients two years after completing recommended therapy for Cryptococcal meningitis in Uganda. S1 Dataset. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0210287.s001

Kwizera, R, Cresswell, FV, Mugumya, G, Okirwoth, M, Kagimu, E, Bangdiwala, AS, Williams, DA, Rhein, J, Boulware, DR and Meya, DB (2019). CSFLAM_data set revised. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.9415853.v1

Lawrence, D, Ssali, A, Moshashane, N, Nabaggala, G, Maphane, L, Harrison, T, Meya, D, Jarvis, J and Seeley, J (2022). Support files for: The acceptability of the AMBITION-cm treatment regimen for HIV-associated cryptococcal meningitis: findings from a qualitative methods study of participants and researchers in Botswana and Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003106.

Lim, SH, Mburu, G, Bourne, A, Pang, J, Wickersham, JA, Wei, CKT, Yee, IA, Wang, B, Cassolato, M and Azwa, I (2017). Willingness to use PrEP Questionnaire. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0182838.s001

Limbada, M, Ayles, H and Macleod, D (2021). A Comparison of Different Community Models of ART Delivery Amongst Stable HIV+ Patients in two Urban Settings in Zambia - Study Protocol. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002116.

Limbada, M, Shibwela, O, Macleod, D and Ayles, H (2020). Data for: Acceptability and Preferences of two different Community Models of ART delivery in a high prevalence Urban Setting in Zambia, nested within the HPTN 071 (PopART) trial. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001657.

Liverani, M (2017). International health cooperation in the Greater Mekong Subregion. [Data Collection]. UK Data Archive, Colchester, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-852820

Llewellyn, CD, Abraham, C, Pollard, A, Jones, CI, Bremner, S, Miners, A and Smith, H (2018). PEPSE for SURE. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.6182381.v1

Lule, SA, Mawa, P, Nkurunungi, G, Nampijja, M, Kizito, D, Akello, F, Muhangi, L, Elliott, A and Webb, EL (2014). Factors associated with tuberculosis infection, and with anti-mycobacterial immune responses, among five year olds BCG-immunised at birth in Entebbe, Uganda. [Data Collection]. Vaccine. https://doi.org/10.1016/j.vaccine.2014.12.015.

MacPherson, P, Khundi, M, Nliwasa, M, Choko, AT, Phiri, VK, Webb, EL, Dodd, PJ, Cohen, T, Harris, R and Corbett, EL (2018). BlantyreTBEpi. [Data Collection]. Github. https://github.com/petermacp/BlantyreTBEpi

Maxwell, S, Gafos, M, Moncrieff, M, Shahmanesh, M and Stirrup, O (2020). STD906927 Supplemental material - Supplemental material for Pre-exposure prophylaxis use among men who have sex with men who have experienced problematic chemsex. [Data Collection]. SAGE Journals. https://doi.org/10.25384/SAGE.11881884.v1

McCarthy, K, Fielding, K, Churchyard, GJ and Grant, AD (2018). Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0191608.s001

Mcharo, R (2022). STIs prevalence among young adults aged 18-24years in Mbeya-Tanzania. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19093115.v3

Mcharo, R, Olomi, W, Mayaud, P, Msuya, SE and Philippe , (2020). Risky sexual behaviours among young adults attending Higher Learning Institutions in Mbeya-Tanzania. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.12806948.v2

Mendelsohn, SC, Fiore-Gartland, A, Penn-Nicholson, A, Mulenga, H, Kimbung, S, Borate, B, Hadley, K, Hikuam, C, Musvosvi, M, Bilek, N, Erasmus, M, Jaxa, L, Raphela, R, Nombida, O, Kaskar, M, Sumner, T, White, RG, Innes, C, Brumskine, W, Hiemstra, A, Malherbe, ST, Hassan-Moosa, R, Tameris, M, Walzl, G, Naidoo, K, Churchyard, G, Scriba, TJ and Hatherill, M (2021). Validation of Correlates of Risk of TB Disease in High Risk Populations (CORTIS-HR) Study: Public, subject-level RISK11 signature scores and metadata. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.14176484.v1

Mkwashapi, D, Katunzi, F, Mtenga, B, Urassa, M, Marston, M and Todd, J (2022). Data for: "Fertility desire for men and women: Magu Health and Demographic surveillance system". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002883.

Monod, M, Brizzi, A, Galiwango, R, Ssekubugu, R, Chen, Y, Xi, X, Kankaka, EN, Ssempijja, V, Abeler-Dörner, L, Akullian, A, Pereira Blenkinsop, A, Bonsall, D, Chang, L, Dan, S, Fraser, C, Golubchik, T, Gray, R, Jackson, J, Kigozi, G, Laeyendecker, O, Mills, L, Quinn, T, Reynolds, SJ, Santelli, J, Sewankambo, N, Spencer, S, Ssekasanvu, J, Waver, M, Serwadda, D, Godfrey-Faussett, P, Kagaayi, J, Grabowski, MK, Ratmann, O, Rakai Health Sciences Program and PANGEA-HIV consortium (2023). Phylogenetic and epidemiologic data relating to age-specific HIV incidence and transmission in Rakai, Uganda, 2003-2018. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7741616

Monod, M, Brizzi, A, Ratmann, O, Dan, S, Xi, X, Galiwango, R, Ssekubugu, R, Chen, Y, Kankaka, EN, Ssempijja, V, Abeler-Dörner, L, Akullian, A, Blenkinsop, AP, Bonsall, D, Chang, L, Fraser, C, Golubchik, T, Gray, R, Jackson, J, Laeyendecker, O, Mills, L, Quinn, T, Santelli, J, Sewankambo, N, Spencer, S, Ssekasanvu, J, Waver, M, Serwadda, D, Godfrey-Faussett, P, Kagaayi, J and Grabowski, MK (2023). Phylogenetic and epidemiologic data relating to age-specific HIV incidence and transmission in Rakai, Uganda, 2003-2018. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7741616

Morhason-Bello, IO, Baisley, K, Pavon, MA, Adewole, IF, Bakare, RA, de Sanjosé, S, Francis, SC and Watson-jones, D (2022). Concordance of genotype specific HPV infections across the four anatomic sites. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0265269.s004

Mtenga, B, Beard, J, Todd, J and Urassa, M (2021). Kisesa Tanzania - HIV missing data analysis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002083.

Muchene, L and Safari, W (2021). Two-stage topic modelling of scientific publications: A case study of University of Nairobi, Kenya. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0243208.s006

Mugisha, J, Mokaya, J, Bukenya, D, Ssembajja, F, Mayambala, D, Newton, R, Matthews, PC and Seeley, J (2019). A Study of Knowledge, Experience, and Beliefs About Hepatitis B Virus (HBV) Infection in South Western Uganda. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.8340860.v1

Nair, M, Kumar, P, Pandey, S, Kazmi, S, Moreto-Planas, L, Ranjan, A and Burza, S (2020). Quality of life perceptions amongst patients co-infected with Visceral Leishmaniasis and HIV: A qualitative study from Bihar, India. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0227911.s003

Nakamanya, S, Kawuma, R, Kibuuka, D, Kusemererwa, S, McCormack, S, Ruzagira, E and Seeley, J (2022). Registration cohort–baseline data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0271104.s001

Nakamanya, S, Kawuma, R, Kibuuka, D, Kusemererwa, S, McCormack, S, Ruzagira, E and Seeley, J (2022). Registration cohort–followup data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0271104.s002

Nliwasa, M, MacPherson, P, Chisala, P, Kamdolozi, M, Khundi, MJ, Kaswaswa, K, Mwapasa, M, Msefula, C, Sohn, H, Flach, C and Corbett, E (2016). LAMP minimal dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0155101.s001

Nnko, S, Bukenya, D, Kavishe, BB, Biraro, S, Peck, R, Kapiga, S, Grosskurth, H and Seeley, J (2015). Chronic Diseases in North-West Tanzania and Southern Uganda. Public Perceptions of Terminologies, Aetiologies, Symptoms and Preferred Management. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0142194.s001

Ouansafi, I (2021). Friendship Bench problem-solving therapy and its impact on adherence to ART among young people – Interview transcripts. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002002.

O’Hara, G, Mokaya, J, Hau, J, Downs, L, Karabarinde, A, Asiki, G, McNaughton, A, Seeley, J, Matthews, P and Newton, R (2021). Liver function tests and fibrosis scores in a rural population in Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.8292194.v3

PANGEA-HIV Consortium (2023). PANGEA-HIV/PANGEA-Sequences: v1.0.0. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10075814

Phillips, A, Cambiano, V, Nakagawa, F, Magubu, T, Miners, A, Ford, D, Pillay, D, De Luca, A, Lundgren, J and Revill, P (2014). Cost-Effectiveness of HIV Drug Resistance Testing to Inform Switching to Second Line Antiretroviral Therapy in Low Income Settings: Supporting material. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.1155223

Pickering, S, Hue, S, Kim, E, Reddy, S, Wolinsky, SM and Neil, SJD (2017). Preservation of Tetherin and CD4 Counter-Activities in Circulating Vpu Alleles despite Extensive Sequence Variation within HIV-1 Infected Individuals. [Data Collection]. Figshare. https://doi.org/10.1371/journal.ppat.1003895

Pietersen, E, Anderson, K, Cox, H, Dheda, K, Bian, A, Shepherd, BE, Sterling, TR, Warren, RM and van der Heijden, YF (2023). Data for: "Variation in missed doses and reasons for discontinuation of anti-tuberculosis drugs during hospital treatment for drug-resistant tuberculosis in South Africa". [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0281097.s001

Pisani, E, Purnomo, H, Sutrisna, A, Asy, A, Zaw, M, Bull, H, Tilman, C and Neilsen, G (2009). HIV, STIs and risk behaviour in Dili, East Timor, 2003. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/W5ZHIE

Rehman, AM, Simms, V, McHugh, G, Mujuru, H, Ngwira, LG, Semphere, R, Moyo, B, Bandason, T, Odland, JO and Ferrand, RA (2022). Adherence to additional medication for management of HIV-associated comorbidities among older children and adolescents taking antiretroviral therapy. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0269229.s001

Rodriguez, CA, Lodi, S, Horsburgh, CR, Bastard, M, Hewison, C, Huerga, H, Khan, M, Khan, PY, Khan, U, Oyewusi, L, Padayachee, S, Mitnick, CD and Franke, MF (2022). Selection bias in multidrug-resistant tuberculosis cohort studies assessing sputum culture conversion. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0276457.s003

Rujumba, J, Homsy, J, Bannink, F, Namukwaya, Z, Amone, A, Rukundo, G, Katabira, E, Byamugisha, J, Fowler, MG and King, RL (2021). Interview excerpts by major themes and sub-themes perceptions of HIV self-testing in Kampala. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0253616.s003

Rukundo, GZ, Levin, J, Mpango, RS, Patel, V and Kinyanda, E (2021). Effect of suicidality on clinical and behavioural outcomes in HIV positive adults in Uganda. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0254830.s002

Rural AIDS & Development Action Research Programme, University of the Witwatersrand, London School of Hygiene and Tropical Medicine and Small Enterprise Foundation (2014). Intervention with Microfinance for AIDS and Gender Equity 2001-2003. [Data Collection]. DataFirst. https://doi.org/10.25828/yebs-j953

Rylance, S, Ferrand, R, Bandason, T and McHugh, G (2019). ZENITH spirometry of older children and adolescents living with HIV in Zimbabwe. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001045.

Rylance, S, Ferrand, R, McHugh, G and Bandason, T (2019). INHALE spirometry of older children and adolescents living with HIV and on ART in Zimbabwe. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001046.

Safari, W and Baisley, K (2021). Clinic attendance by sex and HIV status in rural South Africa - Data and Code. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002130.

Schwalb, A (2023). Data for: "Impact of micro- and macronutrient status on the incidence of tuberculosis: an examination of an African cohort initiating antiretroviral therapy". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003506.

Scriba, TJ, Kimuda, SG, Biraro, IA, Bagaya, BS, Raynes, JG and Cose, S (2018). S1 Data File for: "Characterising antibody avidity in individuals of varied Mycobacterium tuberculosis infection status using surface plasmon resonance". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0205102.s007

Seeley, J and Edwards, A (2019). The direct and indirect effects of HIV/ AIDS on the Health and wellbeing of older people study (WOPS)- Wave 3. [Data Collection]. AHRI Data Repository. https://data.ahri.org/index.php/catalog/914

Shanaube, K, Gachie, T, Hoddinott, G, Schaap, A, Floyd, S, Mainga, T, Bond, V, Hayes, R, Fidler, S and Ayles, H (2022). Depressive symptoms and HIV risk behaviours among adolescents enrolled in the HPTN071 (PopART) trial in Zambia and South Africa. Aggregate dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278291.s012

Simms, V (2021). Effectiveness of a peer-led adolescent mental health intervention on HIV virological suppression and mental health in Zimbabwe: data collection documents. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002312.

Simms, V, Chibanda, D, Abas, M and Munetsi, E (2023). A non-randomised cohort study of mental health and HIV virological suppression in people living with HIV receiving Friendship Bench lay counselling in Harare, Zimbabwe - Virological Suppression Questionnaire. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003219.

Simms, V and Chinoda, S (2021). Effectiveness of a peer-led adolescent mental health intervention on HIV virological suppression and mental health in Zimbabwe: Baseline and Endline questionnaires. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002142.

Simms, V and Ferrand, R (2024). VITALITY: Vitamin D for adolescents with HIV to reduce musculoskeletal morbidity and immunopathology - Baseline Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003868.

Simms, V, Dziva Chikwari, C, Ferrand, R and Bandason, T (2024). Data for: "Differentiated HIV care cascade for youth in Zimbabwe". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003649.

Stangl, AL, Pliakas, T, Izazola-Licea, JA, Ayala, G, Beattie, TS, Ferguson, L, Orza, L, Mathur, S, Pulerwitz, J, Iovita, A and Bendaud, V (2022). S1 Data - Removing the societal and legal impediments to the HIV response: An evidence-based framework for 2025 and beyond. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0264249.s008

Stevens, O and Anderson, R (2024). Population size, HIV prevalence, and antiretroviral therapy coverage among key populations in sub-Saharan Africa: collation and synthesis of survey data 2010-2023. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10838437

Stoner, MCD, Kilburn, K, Godfrey-faussett, P, Ghys, P and Pettifor, AE (2021). Supporting files for "Cash transfers for HIV prevention: A systematic review". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

Sturt, A (2021). Data for: "Association between Female Genital Schistosomiasis and HIV-1 incidence: a retrospective cohort study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001927.

Tang, W, Wei, C, Cao, B, Wu, D, Li, KT, Lu, H, Ma, W, Kang, D, Li, H, Liao, M, Mollan, KR, Hudgens, MG, Liu, C, Huang, W, Liu, A, Zhang, Y, Smith, MK, Mitchell, KM, Ong, JJ, Fu, H, Vickerman, P, Yang, L, Wang, C, Zheng, H, Yang, B and Tucker, JD (2018). Deidentified survey data for: "Crowdsourcing to expand HIV testing among men who have sex with men in China: A closed cohort stepped wedge cluster randomized controlled trial". [Data Collection]. PLOS Medicine. https://doi.org/10.1371/journal.pmed.1002645.s007

Tenforde, MW, Muthoga, C, Callaghan, A, Ponetshego, P, Ngidi, J, Mine, M, Jordan, A, Chiller, T, Larson, BA and Jarvis, JN (2019). Cost-effectiveness of reflex laboratory-based cryptococcal antigen screening for the prevention and treatment of cryptococcal meningitis in Botswana. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/URXAG

Thiha, N, Chinnakali, P, Harries, AD, Shwe, M, Balathandan, TP, Thein Than Tun, S, Das, M, Tin, HH, Yi, Y, Babin, FX, Lwin, TT and Clevenbergh, PA (2016). S1 Data for: "Is There a Need for Viral Load Testing to Assess Treatment Failure in HIV-Infected Patients Who Are about to Change to Tenofovir-Based First-Line Antiretroviral Therapy? Programmatic Findings from Myanmar". [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0160616.s001

Tumwesige, E, Kawuma, R, Asiimwe, A, Nabimanya, P, Nakate, S, Bernays, S and Seeley, J (2024). “She held my hand and advised me”: Young migrants’ experiences of individual peer support to access health and social services in two small towns in southwestern Uganda. Thematic table. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0003713.s002

VanHoek, A (2017). Economic evaluation of HIV-exposure Prophylaxis among men who have sex with men in England: Supplementary material. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/PUBS.04433707

Velen, K, Lewis, JJ, Charalambous, S, Page-Shipp, L, Popane, F, Churchyard, GJ and Hoffmann, CJ (2016). Household HCT Data. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0155688.s001

Vermund, SH, Mayhew, S, Ploubidis, G, Sloggett, A, Church, K, Obure, CD, Birdthistle, I, Sweeney, S, Warren, CE, Watts, C, Vassall, A and Integra Initiative (2016). Innovation in Evaluating the Impact of Integrated Service-Delivery: The Integra Indexes of HIV and Reproductive Health Integration. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0146694

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between DREAMS and experiences of violence among AGYW followed up in 2019 by site and age group using conventional logistic regression. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s005

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and any experience of violence among AGYW in Gem using conventional logistic regression. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s007

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and any experience of violence among AGYW in Nairobi using conventional logistic regression. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s006

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and any experience of violence among AGYW in uMkhanyakude using conventional logistic regression. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s008

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and emotional violence among AGYW in Gem using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s013

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and emotional violence among AGYW in Nairobi using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s012

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and emotional violence among AGYW in uMkhanyakude using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s014

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and physical violence among AGYW in Gem using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s010

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and physical violence among AGYW in Nairobi using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s009

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and sexual violence among AGYW in Gem using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s016

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and sexual violence among AGYW in Nairobi using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s015

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Association between invitation to DREAMS and sexual violence among AGYW in uMkhanyakude using conventional logistic regression, 13–22 year-olds. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s017

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Characteristics of DREAMS beneficiaries and non-beneficiaries at time of cohort enrolment by invitation to DREAMS in Nairobi, Gem and uMkhanyakude. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s004

Wambiya, EOA, Gourlay, AJ, Mulwa, S, Magut, F, Mthiyane, N, Orindi, B, Chimbindi, N, Kwaro, D, Shahmanesh, M, Floyd, S, Birdthistle, I and Ziraba, A (2023). Proportions of AGYW retained in the study vs lost to follow up by 2019, by AGYW characteristics in Gem. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001818.s002

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