LSHTM Organisational Structure (3749)

Faculty of Infectious and Tropical Diseases (1005)

Dept of Immunology and Infection (-2019) (94) Data Creators(s) Item Type No Grouping

Supplementary Data for: "The comparative immunology of wild and laboratory mice, Mus musculus domesticus". (2017) Abolins, Stephen; King, Elizabeth; Lazarou, Luke; Weldon, Laura; Hughes, Louise; Drescher, Paul; Raynes, John; Hafalla, Julius; Viney, Mark E.; Riley, Eleanor

The ecology of immune state in a wild mammal, Mus musculus domesticus. (2018) Abolins, Stephen; Lazarou, Luke; Weldon, Laura; Hughes, Louise; King, Elizabeth C.; Drescher, Paul; Pocock, Michael J. O.; Hafalla, Julius C. R.; Riley, Eleanor M.; Viney, Mark

The ecology of immune state in a wild mammal, Mus musculus domesticus. (2018) Abolins, Stephen; Lazarou, Luke; Weldon, Laura; Hughes, Louise; King, Elizabeth C.; Drescher, Paul; Pocock, Michael J. O.; Hafalla, Julius C. R.; Riley, Eleanor M.; Viney, Mark

Data from: Assessment of markers of antimalarial drug resistance in Plasmodium falciparum isolates from pregnant women in Lagos, Nigeria. (2016) Agomo, Chimere Obiora; Oyibo, Wellington Aghoghovwia; Sutherland, Colin; Hallet, Rachael; Oguike, Mary C.

Genome-wide transcriptional profiling of HIV positive and negative adults with active tuberculosis, latent TB infection and other diseases. (2013) Anderson, Suzanne T; Coin, Lachlan J; Crampin, Amelia C.; Dockrell, Hazel M.; Eley, Brian; French, Neil; Heyderman, Robert S.; Hibberd, Martin L.; Kaforou, Myrsini; Kern, Florian; Langford, Paul R.; Levin, M; Ling, Ling; Wilkinson, Robert J.; Wright, Victoria J.

Primary macrophages and J774 cells respond differently to infection with Mycobacterium tuberculosis. (2017) Andreu, Nuria; Phelan, Jody; de Sessions, Paola F; Cliff, Jackie M.; Clark, Taane; Hibberd, Martin

Genome-scale comparison of expanded gene families in Plasmodium ovale wallikeri and Plasmodium ovale curtisi with Plasmodium malariae and with other Plasmodium species. (2016) Ansari, Hifzur Rahman; Templeton, Thomas J.; Subudhi, Amit Kumar; Ramaprasad, Abhinay; Tang, Jianxia; Lu, Feng; Naeem, Raeece; Hashish, Yasmeen; Oguike, Mary C.; Benavente, Ernest Diez; Clark, Taane G.; Sutherland, Colin J.; Barnwell, John W.; Culleton, Richard; Cao, Jun; Pain, Arnab

Dataset: India ICEMR Severe P. vivax and falciparum Cohort. (2020) Anvikar, Anupkumar R.; Anna Maria van Eijk; Shah, Asha; Upadhyay, Kamlesh J.; Sullivan, Steven; Patel, Ankita J.; Joshi, Jaykumar M.; Tyagi, Suchi; Singh, Ranvir; Gupta, Himanshu; Wassmer, Samuel; Carlton, Jane

Data from: Functional antibodies against Plasmodium falciparum sporozoites are associated with a longer time to qPCR-detected infection among schoolchildren in Burkina Faso. (2019) Barry, Aissata; Behet, Marije C.; Nébié, Issa; Lanke, Kjerstin; Grignard, Lynn; Ouedraogo, Alphonse; Soulama, Issiaka; Drakeley, Chris; Sauerwein, Robert; Bolscher, Judith M.; Dechering, Koen J.; Bousema, Teun; Tiono, Alfred B.; Gonçalves, Bronner P.

Images of selected cells of the TbGOS02 recombinant Trypanosoma brucei brucei cell line. (2021) Borg, Yanika; Alsford, Sam; Zaikin, Alexey; Nesbeth, Darren

Sequence of the UbeK trypanosomal degron. (2021) Borg, Yanika; Alsford, Sam; Zaikin, Alexey; Nesbeth, Darren

Plasmodium falciparum gametocyte density and infectivity in peripheral blood and skin tissue of naturally infected parasite carriers in Burkina Faso. (2021) Bousema, Teun; Meibalan, Elamara; Barry, Aissata; Gibbins, Matthew; Awandu, Shehu; Meerstein-Kessel, Lisette; Achar, Fiona; Bopp, Selina; Moxon, Christopher; Diarra, Amidou; Debe, Siaka; Ouedraogo, Nicolas; Barry-Some, Ines; Badoum, Emilie; Fagnima, Traore; Lanke, Kjerstin; Goncalves, Bronner; Bradley, John; Wirth, Dyann; Drakeley, Chris; Guelbeogo, Wamdaogo; Tiono, Alfred; Marti, Matthias; Gibbins, Matthew P; Achcar, Fiona; Ouédraogo, Nicolas; Badoum, Emilie S; Fagnima, Traoré; Gonçalves, Bronner P; Guelbeogo, Wamdaogo Moussa; Tiono, Alfred B.

Bed capacity for Ebola patients in Sierra Leone. (2015) Camacho, Anton; Kucharski, Adam J.; Aki-Sawyerr, Y; White, M A; Flasche, Stefan; Baguelin, Marc; Pollington, T M; Carney, J; Glover, Rebecca; Smout, E; Tiffany, A; Edmunds, W. John; Funk, Sebastian

zadyson/TyphiNET. (2022) Cerdeira, Louise; Dyson, Zoe Anne

Transcriptome data for bacterial and fungal keratitis compared to cadaver cornea. (2014) Chidambaram, Jaya D.; Bauer, Julien; Holland, Martin; Burton, Matthew; Prajna, Namperumalsamy V; Srikanthi, Palepu; Lalitha, Prajna; Elakkiya, Shanmugam; Lanjewar, Shruti

Comparison of M. tuberculosis and M. bovis BCG in diluted whole blood cultures. (2015) Cliff, Jackie; Cho, Jang-Eun; Lee, Ji-Sook; Ronacher, Katharina; King, Elizabeth; van Helden, Paul; Walzl, Gerhard; Dockrell, Hazel

Excessive Cytolytic Responses Predict Tuberculosis Relapse After Apparently Successful Treatment. (2015) Cliff, Jackie; Cho, Jang-Eun; Lee, Ji-Sook; Ronacher, Katharina; King, Elizabeth; van Helden, Paul; Walzl, Gerhard; Dockrell, Hazel

Tuberculosis Patients Blood Gene Expression Through Treatment. (2012) Cliff, Jackie; Lee, Ji-Sook; Constantinou, Nicholas; Cho, Jang-Eun; Clark, Taane G.; Ronacher, Katharina; King, Elizabeth C.; Lukey, Pauline T.; Duncan, Ken; Van Helden, Paul D.; Walzl, Gerhard; Dockrell, Hazel M.

Tuberculosis Patients Blood Gene Expression Through Treatment (cured and end-of-treatment patients). (2012) Cliff, Jackie; Lee, Ji-Sook; Constantinou, Nicholas; Cho, Jang-Eun; Clark, Taane G.; Ronacher, Katharina; King, Elizabeth C.; Lukey, Pauline T.; Duncan, Ken; Van Helden, Paul D.; Walzl, Gerhard; Dockrell, Hazel M.

Chemogenomic profiling of anti-leishmanial efficacy and resistance in the related kinetoplastid parasite Trypanosoma brucei. (2019) Collett, Clare F; Kitson, Carl; Baker, Nicola; Steele-stallard, Heather B.; Santrot, Marie Victoire; Hutchinson, Sebastian; Horn, David; Alsford, Sam

E-MTAB-8835 - Ribosome profiling of Mycobacterium tuberculosis under nutrient starvation. (2021) Cortes, Teresa

Serologically Defined Variations in Malaria Endemicity in Pará State, Brazil. Supplementary dataset. (2021) Cunha, Maristela G.; Silva, Eliane S.; Sepúlveda, Nuno; Costa, Sheyla P. T.; Saboia, Tiago C.; Guerreiro, João F.; Póvoa, Marinete M.; Corran, Patrick H.; Riley, Eleanor; Drakeley, Chris J.

Decoding the network of Trypanosoma brucei proteins that determines sensitivity to apolipoprotein-L1. (2018) Currier, Rachel B.; Cooper, Anneli; Burrell-saward, Hollie; MacLeod, Annette; Alsford, Sam

Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations. (2017) Diez Benavente, Ernest; Florez de Sessions, Paola; Moon, Robert W.; Holder, Anthony A.; Blackman, Michael J.; Roper, Cally; Drakeley, Christopher J.; Pain, Arnab; Sutherland, Colin J.; Hibberd, Martin L.; Campino, Susana; Clark, Taane G.

Supporting data for "Genomics of the Argentinian cholera epidemic elucidate the contrasting dynamics of epidemic and endemic Vibrio cholerae". (2020) Dorman, Matthew J.; Domman, Daryl; Poklepovich, Tomás; Tolley, Charlotte; Zolezzi, Gisella; Kane, Leanne; Viñas, María Rosa; Panagópulo, Marcela; Moroni, Miriam; Binsztein, Norma; Caffer, María Inés; Clare, Simon; Dougan, Gordon; Salmond, George P. C.; Parkhill, Julian; Campos, Josefina; Thomson, Nicholas R.

Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemic Vibrio cholerae infection. (2021) Dorman, Matthew; Thomson, Nicholas R.; Campos, Josefina

Supporting data for "Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemic Vibrio cholerae infection". (2021) Dorman, Matthew; Thomson, Nicholas R.; Campos, Josefina

PRISM ICEMR Cohort. (2020) Dorsey, Grant; Kamya, Moses; Greenhouse, Bryan; Arinaitwe, Emmanuel; Kilama, Maxwell; Mayanja-Kizza, Harriet; Nankabirwa, Joaniter; Katureebe, Agaba; Kakande, Elijah; Rek, John; Nsobya, Sam; Kiggundu, Moses; Mawejje, Henry; Nzarubara, Bridget; Lavoy, Geoff; Ruhamyankaka, Emmanuel; Kigozi, Simon; Rosenthal, Philip; Rodriguez-Barraquer, Isabel; Charlebois, Edwin; Clark, Tamara; Staedke, Sarah G.; Drakeley, Chris; Donnelly, Martin; Lindsay, Steve; Smith, David; Tatem, Andrew

Impaired resolution of blood transcriptomes through tuberculosis treatment with diabetes comorbidity. (2023) Eckold, Clare; van Doorn, Cassandra LR; Dockrell, Hazel; Ottenhoff, Tom HM; Vianello, Eleanora; Cliff, Jacqueline M

gbpA and chiA genes are not uniformly distributed amongst diverse Vibrio cholerae. (2021) Fennell, Thea G.; Blackwell, Grace A.; Thomson, Nicholas R.; Dorman, Matthew J.

PBMC expression profiles of BCG vaccine protected infants and of BCG vaccinated infants who develop tuberculosis disease. (2014) Fletcher, Helen A.; Filali-Mouhim, Ali; Nemes, Elisa; Hawkridge, Anthony; Keyser, Alana; Njikan, Samuel; Hatherill, Mark; Scriba, Thomas J.; Abel, Brian; Kagina, Benjamin M.; Veldsman, Ashley; Agudelo, Nancy Marín; Kaplan, Gilla; Hussey, Gregory D.; Sekaly, Rafick-Pierre; Hanekom, Willem A.

Transcriptional profiling of mycobacterial antigen-induced responses in infants vaccinated with BCG at birth. (2009) Fletcher, Helen A.; Keyser, A; Bowmaker, M; Sayles, PC; Kaplan, G; Hussey, G; Hill, AV; Hanekom, WA

Study database for: "Adverse pregnancy outcomes are associated with Plasmodium vivax malaria in a prospective cohort of women from the Brazilian Amazon". (2021) Fuehrer, Hans-Peter; Dombrowski, Jamille Gregório; Barateiro, André; Peixoto, Erika Paula Machado; Barros, André Boler Cláudio da Silva; Souza, Rodrigo Medeiros de; Clark, Taane Gregory; Campino, Susana; Wrenger, Carsten; Wunderlich, Gerhard; Palmisano, Giuseppe; Epiphanio, Sabrina; Gonçalves, Lígia Antunes; Marinho, Claudio Romero Farias

Consolidated results of dogs in the 2018 and 2019 studies. (2021) Fujisawa, Kyoko; Silcott-Niles, Charlotte; Simonson, Poppy; Lamattina, Daniela; Humeres, Cristian A.; Bhattacharyya, Tapan; Mertens, Pascal; Thunissen, Caroline; O’Rourke, Victoria; Pańczuk, Magdalena; Whitworth, James A.; Salomón, Oscar Daniel; Miles, Michael A.

Orally Active Antischistosomal Early Leads Identified from the Open Access Malaria Box. (2014) Geary, Timothy G.; Ingram-Sieber, Katrin; Cowan, Noemi; Panic, Gordana; Vargas, Mireille; Mansour, Nuha; Bickle, Quentin; Wells, Timothy N. C.; Spangenberg, Thomas; Keiser, Jennifer

Table_1_Probing Differences in Gene Essentiality Between the Human and Animal Adapted Lineages of the Mycobacterium tuberculosis Complex Using TnSeq.XLSX. (2021) Gibson, Amanda J.; Passmore, Ian J.; Faulkner, Valwynne; Xia, Dong; Nobeli, Irene; Stiens, Jennifer; Willcocks, Sam; Clark, Taane G.; Sobkowiak, Ben; Werling, Dirk; Villarreal-Ramos, Bernardo; Wren, Brendan W.; Kendall, Sharon L.

Transcript abundance comparison between BALB/c ears inoculated with Leishmania mexicana and Leishmania mexicana plus promastigote secretory gel (PSG). (2014) Giraud, Emilie; Rogers, Matthew; Bates, Paul; Dillon, Rod

Identification of Reduced Host Transcriptomic Signatures for Tuberculosis Disease and Digital PCR-Based Validation and Quantification. (2021) Gliddon, Harriet D.; Kaforou, Myrsini; Alikian, Mary; Habgood-Coote, Dominic; Zhou, Chenxi; Oni, Tolu; Anderson, Suzanne T.; Brent, Andrew J.; Crampin, Amelia C.; Eley, Brian; Heyderman, Robert; Kern, Florian; Langford, Paul R.; Ottenhoff, Tom H. M.; Hibberd, Martin L.; French, Neil; Wright, Victoria J.; Dockrell, Hazel M.; Coin, Lachlan J.; Wilkinson, Robert J.; Levin, Michael

Identification and validation of a novel panel of Plasmodium knowlesi biomarkers of serological exposure. (2018) Herman, Lou S.; Fornace, Kimberly; Phelan, Jody; Grigg, Matthew J.; Anstey, Nicholas M.; William, Timothy; Moon, Robert W.; Blackman, Michael J.; Drakeley, Chris J.; Tetteh, Kevin K. A.

Research data supporting "In Vivo Biomolecular Imaging of Zebrafish Embryos using Confocal Raman Spectroscopy". (2020) Hogset, H; Horgan, C.C.; Armstrong, J.P.K; Bergholt, M.S.; Torraca, Vincenzo; Chen, Q; Keane, T.J.; Burgeon, L; Dallman, M.J; Mostowy, Serge; Stevens, M.M.

typhoidgenomics/genotyphi. (2024) Holt, Kathryn E.; Dyson, Zoe Anne; Hawkey, Jane; flashton2003

katholt/sonneityping: v20210201. (2021) Holt, Kathryn E.; Hawkey, Jane; Paranagama, Kalani

Kleborate v2.0.0. (2020) Holt, Kathryn E.; Lam, Margaret; Wick, Ryan

Phylogenetic position of Leishmania isolates from Khyber Pakhtunkhwa province of Pakistan. (2016) Khan, Nazma Habib; Messenger, Louisa A.; Wahid, Sobia; Sutherland, Colin J. description

A non enveloped arbovirus released in lysosome-derived extracellular vesicles induces super infection exclusion. (2020) Labadie, Thomas; Roy, Polly

Comparable exposure to SARS-CoV-2 in young children and healthcare workers in Zambia. (2021) Laban, Natasha

Data for: "A synbiotic intervention modulates meta-omics signatures of gut redox potential and acidity in elective caesarean born infants". (2021) Lay, Christophe; Chu, Collins Wenhan; Purbojati, Rikky Wenang; Acerbi, Enzo; Drautz-Moses, Daniela I.; de Sessions, Paola Florez; Jie, Song; Ho, Eliza; Kok, Yee Jiun; Bi, Xuezhi; Chen, Shuwen; Mak, Shi Ya; Chua, Mei Chien; Goh, Anne E. N.; Chiang, Wen Chin; Rao, Rajeshwar; Chaithongwongwatthana, Surasith; Khemapech, Nipon; Chongsrisawat, Voranush; Martin, Rocio; Koh, Yanqing; Lohar, Sachin R.; Tan, Ivan Chin Hin; Anng, Wong Anng; Jie, Chen; Bartke, Nana; Ben-Amor, Kaouther; Renes, Ingrid B.; Wong, Fiona; Roeselers, Guus; Ho, Ying Swan; Hibberd, Martin L.; Schuster, Stephan C.; Knol, Jan

CEmimix Stata do-file - First version. (2019) Leurent, Baptiste; Gomes, Manuel; Cro, Suzie; Wiles, Nicola; Carpenter, James R.

Sequencing of M/XDR isoaltes from Pakistan. (2021) London School of Hygiene & Tropical Medicine

TB WGS Tanzania. (2020) London School of Hygiene & Tropical Medicine

Factors associated with tuberculosis infection, and with anti-mycobacterial immune responses, among five year olds BCG-immunised at birth in Entebbe, Uganda. (2014) Lule, Swaib Abubaker; Mawa, Patrice; Nkurunungi, Gyaviira; Nampijja, Margaret; Kizito, Dennison; Akello, Florence; Muhangi, Lawrence; Elliott, Alison; Webb, Emily L

C. difficle p-cresol production. (2021) Lynham, Steven; Dawson, Lisa

High Throughput Screening Identifies Novel Lead Compounds with Activity against Larval, Juvenile and Adult Schistosoma mansoni. S1 Table. (2016) Mansour, Nuha R.; Paveley, Ross; Gardner, J. Mark F.; Bell, Andrew S.; Parkinson, Tanya; Bickle, Quentin grid_on

High Throughput Screening Identifies Novel Lead Compounds with Activity against Larval, Juvenile and Adult Schistosoma mansoni. S2 Table. (2016) Mansour, Nuha R.; Paveley, Ross; Gardner, J. Mark F.; Bell, Andrew S.; Parkinson, Tanya; Bickle, Quentin grid_on

Diagnostics development for the neglected parasitic diseases strongyloidiasis and visceral leishmaniasis. (2019) Marlais, Tegwen

Molecular Characterization of Cryptosporidium Species and Giardia duodenalis from Symptomatic Cambodian Children. (2016) Moore, Catrin E.; Elwin, Kristin; Phot, Nget; Seng, Chanthou; Mao, Saroeun; Suy, Kuong; Kumar, Varun; Nader, Johanna; Bousfield, Rachel; Perera, Sanuki; Bailey, J. Wendi; Beeching, Nicholas J.; Day, Nicholas P. J.; Parry, Christopher M.; Chalmers, Rachel M.

S1 Data - The impact of delayed treatment of uncomplicated P. falciparum malaria on progression to severe malaria: A systematic review and a pooled multicentre individual-patient meta-analysis. (2020) Mousa, Andria; Al-Taiar, Abdullah; Anstey, Nicholas M.; Badaut, Cyril; Barber, Bridget E.; Bassat, Quique; Challenger, Joseph D.; Cunnington, Aubrey J.; Datta, Dibyadyuti; Drakeley, Chris; Ghani, Azra C.; Gordeuk, Victor R.; Grigg, Matthew J.; Hugo, Pierre; John, Chandy C.; Mayor, Alfredo; Migot-Nabias, Florence; Opoka, Robert O.; Pasvol, Geoffrey; Rees, Claire; Reyburn, Hugh; Riley, Eleanor M.; Shah, Binal N.; Sitoe, Antonio; Sutherland, Colin J.; Thuma, Philip E.; Unger, Stefan A.; Viwami, Firmine; Walther, Michael; Whitty, Christopher J. M.; William, Timothy; Okell, Lucy C.

S2 Data - The impact of delayed treatment of uncomplicated P. falciparum malaria on progression to severe malaria: A systematic review and a pooled multicentre individual-patient meta-analysis. (2020) Mousa, Andria; Al-Taiar, Abdullah; Anstey, Nicholas M.; Badaut, Cyril; Barber, Bridget E.; Bassat, Quique; Challenger, Joseph D.; Cunnington, Aubrey J.; Datta, Dibyadyuti; Drakeley, Chris; Ghani, Azra C.; Gordeuk, Victor R.; Grigg, Matthew J.; Hugo, Pierre; John, Chandy C.; Mayor, Alfredo; Migot-Nabias, Florence; Opoka, Robert O.; Pasvol, Geoffrey; Rees, Claire; Reyburn, Hugh; Riley, Eleanor M.; Shah, Binal N.; Sitoe, Antonio; Sutherland, Colin J.; Thuma, Philip E.; Unger, Stefan A.; Viwami, Firmine; Walther, Michael; Whitty, Christopher J. M.; William, Timothy; Okell, Lucy C.

The epidemiology of residual Plasmodium falciparum malaria transmission and infection burden in an African city with high coverage of multiple vector control measures. (2016) Msellemu, Daniel; Namango, Hagai I.; Mwakalinga, Victoria M.; Ntamatungiro, Alex J.; Mlacha, Yeromin; Mtema, Zacharia J.; Kiware, Samson; Lobo, Neil F.; Majambere, Silas; Dongus, Stefan; Drakeley, Christopher J; Govella, Nicodem J.; Chaki, Prosper P.; Killeen, Gerry F. grid_on

Additional file 5 of Assessing antibody decline after chemotherapy of early chronic Chagas disease patients. (2021) Murphy, Niamh; Cardinal, M. Victoria; Bhattacharyya, Tapan; Enriquez, Gustavo F.; Macchiaverna, Natalia P.; Alvedro, Alejandra; Freilij, Héctor; Martinez de Salazar, Pablo; Molina, Israel; Mertens, Pascal; Gilleman, Quentin; Gürtler, Ricardo E.; Miles, Michael A.

Replication data for: Characterization of naturally acquired immunity to a panel of antigens expressed in mature P. falciparum gametocytes. (2021) Muthui, Michelle K.; Takashima, Eizo; Omondi, Brian R.; Kinya, Christine; Muasya, William I.; Nagaoka, Hikaru; Mwai, Kennedy; Orindi, Benedict; Wambua, Juliana; Bousema, Teun; Drakeley, Chris; Blagborough, Andrew M.; Marsh, Kevin; Bejon, Philip; Kapulu, Melissa C.

The role of the home environment in neurocognitive development of children in Uganda. (2018) Nampijja, Margaret description

MOESM4 of Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population. (2016) Ochola-Oyier, Lynette Isabella; Okombo, John; Wagatua, Njoroge; Ochieng, Jacob; Tetteh, Kevin K; Fegan, Greg; Bejon, Philip; Marsh, Kevin grid_on

Additional file 1 of Impact of azithromycin mass drug administration on the antibiotic-resistant gut microbiome in children: a randomized, controlled trial. (2022) Pickering, Harry; Hart, John D.; Burr, Sarah; Stabler, Richard; Maleta, Ken; Kalua, Khumbo; Bailey, Robin L.; Holland, Martin J.

Blood glucose concentration time series in mice infected with malaria parasites. (2021) Prior, Kimberley F.; Middleton, Benita; Owolabi, Alíz T.Y.; Westwood, Mary L.; Holland, Jacob; O'Donnell, Aidan J.; Blackman, Michael J.; Skene, Debra J.; Reece, Sarah E.

Plasmodium chabaudi genotype DK parasite stages during time series. (2021) Prior, Kimberley F.; Middleton, Benita; Owolabi, Alíz T.Y.; Westwood, Mary L.; Holland, Jacob; O'Donnell, Aidan J.; Blackman, Michael J.; Skene, Debra J.; Reece, Sarah E.

Plasmodium schizont densities in culture grown with and without isoleucine, as well as isoleucine starvation for different durations of time. (2021) Prior, Kimberley F.; Middleton, Benita; Owolabi, Alíz T.Y.; Westwood, Mary L.; Holland, Jacob; O'Donnell, Aidan J.; Blackman, Michael J.; Skene, Debra J.; Reece, Sarah E.

Plasmodium schizont proportion in culture grown with and without isoleucine. (2021) Prior, Kimberley F.; Middleton, Benita; Owolabi, Alíz T.Y.; Westwood, Mary L.; Holland, Jacob; O'Donnell, Aidan J.; Blackman, Michael J.; Skene, Debra J.; Reece, Sarah E.

Targeted metabolomics on malaria-infected mouse blood. (2021) Prior, Kimberley F.; Middleton, Benita; Owolabi, Alíz T.Y.; Westwood, Mary L.; Holland, Jacob; O'Donnell, Aidan J.; Blackman, Michael J.; Skene, Debra J.; Reece, Sarah E.

Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016. (2020) Rahman, Sadia Isfat Ara; Dyson, Zoe A.; Klemm, Elizabeth J.; Khanam, Farhana; Holt, Kathryn E.; Chowdhury, Emran Kabir; Dougan, Gordon; Qadri, Firdausi

klebgenomics/Kleborate: v3.0.0. (2024) Ryan Wick; Holt, Kathryn E.; marlam89; kelwyres; Maranga, Mary; Petit III, Robert A.; da Silva, Anders Goncalves; Deveaud, Eric; Lampa, Samuel; Stanton, Tom

S1 Data File for: "Characterising antibody avidity in individuals of varied Mycobacterium tuberculosis infection status using surface plasmon resonance". (2018) Scriba, Thomas J.; Kimuda, Simon G.; Biraro, Irene Andia; Bagaya, Bernard S.; Raynes, John G.; Cose, Stephen

Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. (2018) Sepúlveda, Nuno; Phelan, Jody; Diez-Benavente, Ernest; Campino, Susana; Clark, Taane G.; Hopkins, Heidi; Sutherland, Colin; Drakeley, Chris J.; Beshir, Khalid B.

Low and heterogeneous prevalence of glucose-6-phosphate dehydrogenase deficiency in different settings in Ethiopia using phenotyping and genotyping approaches. (2018) Shitaye, Getasew; Gadisa, Endalamaw; Grignard, Lynn; Shumie, Girma; Chali, Wakweya; Menberu, Temesgen; Belachew, Mulualem; Tegegn, Getaneh; Challi, Sagni; Curry, Jonathan; Mahey, Laleta; Hailu, Tsegaye; Mamo, Hassen; Menon, Menakath; Balcha, Taye; Aseffa, Abraham; Drakeley, Chris; Bousema, Teun; Tadesse, Fitsum G.

Genome organization of dengue and Zika viruses. (2019) Sim, Adelene Y. L.; Huber, Roland G.; Lim, Xin Ni; Ng, Wy Ching; Chawla, Tanu; Aw, JG; Lim, Su Ying; Shen, Y; Boon, K; Choy, Milly M.; Wilm, Andreas; de Sessions, Paola Florez; Hibberd, Martin; Nagarajan, Niranjan; Ooi, Eng Eong; Bond, Peter J.; Sessions, October M.; Wan, Yue

C-type lectin 4 regulates broad-spectrum melanization-based refractoriness to malaria parasites. The underlying data for all graphs. (2022) Simões, Maria Luisa; Dong, Yuemei; Mlambo, Godfree; Dimopoulos, George

Data for: "Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus". (2021) Spadar, Anton; Phelan, Jody; Diez-Benavente, Ernest; Campos, Monica; Gomez, Lara Ferrero; Mohareb, Fady; Clark, Taane G.; Campino, Susana

Identification and characterisation of bacterial TIR domains, with particular focus on yersinia pestis: Study Data. (2011) Spear, Abigail Mary grid_on

Data from: Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. (2018) Stone, Will J. R.; Campo, Joseph J.; Ouédraogo, André Lin; Meerstein-Kessel, Lisette; Morlais, Isabelle; Da, Dari; Cohuet, Anna; Nsango, Sandrine; Sutherland, Colin J.; van de Vegte-Bolmer, Marga; Siebelink-Stoter, Rianne; van Gemert, Geert-Jan; Graumans, Wouter; Lanke, Kjerstin; Shandling, Adam D.; Pablo, Jozelyn V.; Teng, Andy A.; Jones, Sophie; de Jong, Roos M.; Fabra-García, Amanda; Bradley, John; Roeffen, Will; Lasonder, Edwin; Gremo, Giuliana; Schwarzer, Evelin; Janse, Chris J.; Singh, Susheel K.; Theisen, Michael; Felgner, Phil; Marti, Matthias; Drakeley, Chris; Sauerwein, Robert; Bousema, Teun; Jore, Matthijs M.

The Plasmodium falciparum artemisinin susceptibility-associated AP-2 adaptin mu subunit is clathrin-independent and essential for schizont-maturation v2.0. (2020) Sutherland, Colin; Henrici, Ryan

Plasmodium falciparum drug resistant genotypes - SUMUT study, North Sumatera, 2015. (2022) Sutherland, Colin; Lubis, Inke Nadia grid_on

Optimisation and standardisation of a multiplex immunoassay of diverse Plasmodium falciparum antigens to assess sero-epidemiological changes in malaria transmission. (2020) Tetteh, Kevin K A

P. knowlesi DHFR sequence data. (2016) Tsuboi, Takafumi; Grigg, Matthew; Barber, Bridget E.; Marfurt, Jutta; Imwong, Mallika; William, Timothy; Bird, Elspeth; Piera, Kim A.; Aziz, Ammar; Boonyuen, Usa; Drakeley, Chris; Cox, Jonathan; White, Nicholas J.; Cheng, Qin; Yeo, Tsin W.; Auburn, Sarah; Anstey, Nicholas M. description

Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. (2016) Van Voorhis, Wesley C.; Adams, John H.; Adelfio, Roberto; Ahyong, Vida; Akabas, Myles H.; Alano, Pietro; Alday, Aintzane; Alemán Resto, Yesmalie; Alsibaee, Aishah; Alzualde, Ainhoa; Andrews, Katherine T.; Avery, Simon V.; Avery, Vicky M.; Ayong, Lawrence; Baker, Mark; Baker, Stephen; Ben Mamoun, Choukri; Bhatia, Sangeeta; Bickle, Quentin; Bounaadja, Lotfi; Bowling, Tana; Bosch, Jürgen; Boucher, Lauren E.; Boyom, Fabrice F.; Brea, Jose; Brennan, Marian; Burton, Audrey; Caffrey, Conor R.; Camarda, Grazia; Carrasquilla, Manuela; Carter, Dee; Belen Cassera, Maria; Chih-Chien Cheng, Ken; Chindaudomsate, Worathad; Chubb, Anthony; Colon, Beatrice L.; Colón-López, Daisy D.; Corbett, Yolanda; Crowther, Gregory J.; Cowan, Noemi; D’Alessandro, Sarah; Le Dang, Na; Delves, Michael; DeRisi, Joseph L.; Du, Alan Y.; Duffy, Sandra; Abd El-Salam El-Sayed, Shimaa; Ferdig, Michael T.; Fernández Robledo, José A.; Fidock, David A.; Florent, Isabelle; Fokou, Patrick V. T.; Galstian, Ani; Gamo, Francisco Javier; Gokool, Suzanne; Gold, Ben; Golub, Todd; Goldgof, Gregory M.; Guha, Rajarshi; Guiguemde, W. Armand; Gural, Nil; Guy, R. Kiplin; Hansen, Michael A. E.; Hanson, Kirsten K.; Hemphill, Andrew; Hooft van Huijsduijnen, Rob; Horii, Takaaki; Horrocks, Paul; Hughes, Tyler B.; Huston, Christopher; Igarashi, Ikuo; Ingram-Sieber, Katrin; Itoe, Maurice A.; Jadhav, Ajit; Naranuntarat Jensen, Amornrat; Jensen, Laran T.; Jiang, Rays H. Y.; Kaiser, Annette; Keiser, Jennifer; Ketas, Thomas; Kicka, Sebastien; Kim, Sunyoung; Kirk, Kiaran; Kumar, Vidya P.; Kyle, Dennis E.; Lafuente, Maria Jose; Landfear, Scott; Lee, Nathan; Lee, Sukjun; Lehane, Adele M.; Li, Fengwu; Little, David; Liu, Liqiong; Llinás, Manuel; Loza, Maria I.; Lubar, Aristea; Lucantoni, Leonardo; Lucet, Isabelle; Maes, Louis; Mancama, Dalu; Mansour, Nuha R.; March, Sandra; McGowan, Sheena; Medina Vera, Iset; Meister, Stephan; Mercer, Luke; Mestres, Jordi; Mfopa, Alvine N.; Misra, Raj N.; Moon, Seunghyun; Moore, John P.; Morais Rodrigues da Costa, Francielly; Müller, Joachim; Muriana, Arantza; Nakazawa Hewitt, Stephen; Nare, Bakela; Nathan, Carl; Narraidoo, Nathalie; Nawaratna, Sujeevi; Ojo, Kayode K.; Ortiz, Diana; Panic, Gordana; Papadatos, George; Parapini, Silvia; Patra, Kailash; Pham, Ngoc; Prats, Sarah; Plouffe, David M.; Poulsen, Sally-Ann; Pradhan, Anupam; Quevedo, Celia; Quinn, Ronald J.; Rice, Christopher A.; Abdo Rizk, Mohamed; Ruecker, Andrea; St. Onge, Robert; Salgado Ferreira, Rafaela; Samra, Jasmeet; Robinett, Natalie G.; Schlecht, Ulrich; Schmitt, Marjorie; Silva Villela, Filipe; Silvestrini, Francesco; Sinden, Robert; Smith, Dennis A.; Soldati, Thierry; Spitzmüller, Andreas; Stamm, Serge Maximilian; Sullivan, David J.; Sullivan, William; Suresh, Sundari; Suzuki, Brian M.; Suzuki, Yo; Swamidass, S. Joshua; Taramelli, Donatella; Tchokouaha, Lauve R. Y.; Theron, Anjo; Thomas, David; Tonissen, Kathryn F.; Townson, Simon; Tripathi, Abhai K.; Trofimov, Valentin; Udenze, Kenneth O.; Ullah, Imran; Vallieres, Cindy; Vigil, Edgar; Vinetz, Joseph M.; Voong Vinh, Phat; Vu, Hoan; Watanabe, Nao-aki; Weatherby, Kate; White, Pamela M.; Wilks, Andrew F.; Winzeler, Elizabeth A.; Wojcik, Edward; Wree, Melanie; Wu, Wesley; Yokoyama, Naoaki; Zollo, Paul H. A.; Abla, Nada; Blasco, Benjamin; Burrows, Jeremy; Laleu, Benoît; Leroy, Didier; Spangenberg, Thomas; Wells, Timothy; Willis, Paul A.

Social contact data for UK. (2018) Van hoek, Albert Jan; Andrews, Nick; Campbell, Helen; Amirthalingam, Gayatri; Edmunds, W. John; Miller, Elizabeth

Targeted Amplicon deep sequencing of ama1 and mdr1 to track within-host P. falciparum diversity in Kilifi, KENYA. (2022) Wamae, Kevin; Ndwiga, Leonard; Kharabora, Oksana; Kimenyi, Kelvin M.; Osoti, Victor; de Laurent, Zaydah R.; Wambua, Juliana; Musyoki, Jennifer; Ngetsa, Caroline; Kalume, Peter; Mwambingu, Gabriel; Hamaluba, Mainga; van der Pluijm, Rob W.; Dondorp, Arjen M.; Bailey, Jeffrey A.; Juliano, Jonathan J.; Bejon, Philip; Ochola-Oyier, Lynette Isabella

Additional file 2 of: Performance of neural network basecalling tools for Oxford Nanopore sequencing. (2019) Wick, Ryan R; Judd, Louise M; Holt, Kathryn E.

Open Source Drug Discovery: Highly Potent Antimalarial Compounds Derived from the Tres Cantos Arylpyrroles. (2016) Williamson, Alice E.; Ylioja, Paul M.; Robertson, Murray N.; Antonova-Koch, Yevgeniya; Avery, Vicky; Baell, Jonathan B.; Batchu, Harikrishna; Batra, Sanjay; Burrows, Jeremy N.; Bhattacharyya, Soumya; Calderon, Felix; Charman, Susan A.; Clark, Julie; Crespo, Benigno; Dean, Matin; Debbert, Stefan L.; Delves, Michael; Dennis, Adelaide S. M.; Deroose, Frederik; Duffy, Sandra; Fletcher, Sabine; Giaever, Guri; Hallyburton, Irene; Gamo, Francisco-Javier; Gebbia, Marinella; Guy, R. Kiplin; Hungerford, Zoe; Kirk, Kiaran; Lafuente-Monasterio, Maria J.; Lee, Anna; Meister, Stephan; Nislow, Corey; Overington, John P.; Papadatos, George; Patiny, Luc; Pham, James; Ralph, Stuart A.; Ruecker, Andrea; Ryan, Eileen; Southan, Christopher; Srivastava, Kumkum; Swain, Chris; Tarnowski, Matthew J.; Thomson, Patrick; Turner, Peter; Wallace, Iain M.; Wells, Timothy N. C.; White, Karen; White, Laura; Willis, Paul; Winzeler, Elizabeth A.; Wittlin, Sergio; Todd, Matthew H.

MOESM1 of An inexpensive open source 3D-printed membrane feeder for human malaria transmission studies. (2018) Witmer, Kathrin; Sherrard-Smith, Ellie; Straschil, Ursula; Tunnicliff, Mark; Baum, Jake; Delves, Michael

MOESM2 of An inexpensive open source 3D-printed membrane feeder for human malaria transmission studies. (2018) Witmer, Kathrin; Sherrard-Smith, Ellie; Straschil, Ursula; Tunnicliff, Mark; Baum, Jake; Delves, Michael

Comparison of diagnostics for the detection of asymptomatic Plasmodium falciparum infections to inform control and elimination strategies. (2015) Wu, Lindsey; van den Hoogen, Lotus L.; Slater, Hannah; Walker, Patrick G. T.; Ghani, Azra C.; Drakeley, Chris J.; Okell, Lucy C.

Data for, "Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from south and southeast Asia.". (2020) Wyres, Kelly L.; Nguyen, To N. T.; Lam, Margaret M. C.; Judd, Louise M.; van Vinh Chau, Nguyen; Dance, David A. B.; Ip, Margaret; Karkey, Abhilasha; Ling, Clare L.; Miliya, Thyl; Newton, Paul N.; Lan, Nguyen Phu Huong; Sengduangphachanh, Amphone; Turner, Paul; Veeraraghavan, Balaji; Vinh, Phat Voong; Vongsouvath, Manivanh; Thomson, Nicholas R.; Baker, Stephen; Holt, Kathryn E.

Transcription profiling of brain, liver and spleen from rats infected with Escherichia coli K1 and treated with capsule-selective endosialidase E. (2014) Zelmer, Andrea; Martin, Melissa; Gundogdu, Ozan; Birchenough, George; Lever, Rebecca; Wren, Brendan; Luzio, J. Paul; Taylor, Peter W.

Raw data for "Cross-laboratory evaluation of multiplex bead assays including independent common reference standards for immunological monitoring of observational and interventional human studies". (2018) van Meijgaarden, Krista E.; Khatri, Bhagwati; Smith, Steven G.; Drittij, Anne M. F. H.; de Paus, Roelof A.; Goeman, Jelle J.; Ho, Mei M.; Dockrell, Hazel M.; McShane, Helen; Joosten, Simone A.; Ottenhoff, Tom H. M.