LSHTM Organisational Structure (4068)

Faculty of Infectious and Tropical Diseases (1112)

Department of Infection Biology (231) Data Creators(s) Title Item Type No Grouping

B

Data from: Impact of directly observed treatment and extended age-range of seasonal malaria chemoprevention with sulfadoxine–pyrimethamine plus amodiaquine in Burkina Faso: A three-arm, open-label, cluster-randomized, controlled trial. (2026) Bousema, Teun; Drakeley, Chris; Tiono, Alfred

C

Dragon. (2026) Cerdeira, Louise

PlasmidNET. (2026) Cerdeira, Louise

lcerdeira/CNVRock: CNVRock. (2026) Cerdeira, Louise

lcerdeira/Pipa. (2026) Cerdeira, Louise

lcerdeira/infectonet. (2026) Cerdeira, Louise

AMRverse/AMRrulebrowser. (2026) Cerdeira, Louise; Holt, Kathryn E.

D

Increasingly complex mosquito vector and pathogen risks along European anthropogenic land use gradients. (2026) Desjardins, Aidan; Bamford, Connor G. G.; Murchie, Archie K; Haddock, Lesley; Morgan, Eric R.; Cameron, Mary; Campino, Susana; Medlock, Jolyon M.; Cuthbert, Ross N.

H

AMRverse/AMRgen. (2026) Holt, Kathryn E.; Berends, Matthijs; Foster-Nyarko, Ebenezer; Hawkey, Jane; karatsang; Nagy, Dorotty A; Dyson, Zoe Anne; Prasad, Arjun; Couto, Natacha; Goodman, Richard; Claude; Silargi; Cuddihy, Thom

J

Klebsiella_reports. (2026) Jolley, Keith

L

Additional file 12 of Abnormal T-Cell activation and cytotoxic T-Cell frequency discriminate symptom severity in myalgic encephalomyelitis/chronic fatigue syndrome. (2026) Lee, Ji Sook; Lacerda, Eliana; Kingdon, Caroline; Abken, Ella; Susannini, Giada; Dockrell, Hazel M.; Nacul, Luis; Cliff, Jacqueline M.

M

Genomic Evolution and Climate Related Drivers of Cholera Surges in Dhaka Bangladesh between 1996 and 2024. (2026) Monir, Md Mamun; Rahman, Khalilur; Islam, Mohammad Tarequl; Sultana, Marzia; Ullah, Wali; Osail, Sardar Muhammad; Ridoy, Md Alimul Islam; Al-Mamun, Abdullah; Monira, Shirajum; Seed, Kimberley D.; Camilli, Andrew; Mavian, Carla; Thomson, Nicholas R.; Colwell, Rita R.; Faruque, ASG; Ahmed, Tahmeed; Alam, Munirul

N

Data supporting "Rural-urban differences in oral typhoid vaccine responses in Uganda: role of Schistosoma mansoni". (2026) Nkurunungi, Gyaviira; Walusimbi, Bridgious grid_on

O

Contribution of nosocomial transmission to Klebsiella pneumoniae neonatal sepsis in Africa and South Asia: An observational study of infection clusters inferred from pathogen genomics and temporal data. (2026) Odih, Erkison Ewomazino; Abdulahi, Jabir A.; Amulele, Anne V.; Bates, Matthew; Heinz, Eva; Hu, Weiming; Jain, Kajal; Magobo, Rindidzani; Olwagen, Courtney P.; Tembo, John M.; Sonda, Tolbert; Strysko, Jonathan; Tigoi, Caroline C.; Bittinger, Kyle; Cornick, Jennifer; Foster-Nyarko, Ebenezer; Gumbi, Wilson; Jones, Steven M.; Musyani, Chileshe L.; McGann, Carolyn M.; Moustafa, Ahmed M.; Musicha, Patrick; Mwansa, James C. L.; Ndumba, Moreka L.; Stanton, Thomas D.; Omuoyo, Donwilliams O.; Pearse, Oliver; Phillips, Laura T.; Planet, Paul J.; Rodrigues, Charlene M. C.; Secka, Fatou; Sands, Kirsty; Theiller, Erin; Zuza, Allan M.; Basu, Sulagna; Chan, Grace J.; Iregbu, Kenneth C.; Mazarati, Jean-Baptiste; Alemayehu, Semaria Solomon; Walsh, Timothy R.; Zahra, Rabaab; Dramowski, Angela; Fwoloshi, Sombo; Labi, Appiah-Korang; Madrid, Lola; Obeng-Nkrumah, Noah; Ojok, David; Wadugu, Boaz D.; Whitelaw, Andrew C.; Bhargava, Anudita; Jindal, Atul; Agarwal, Ramesh K.; Aiken, Alexander M.; Berkley, James A.; Coffin, Susan E.; Feasey, Nicholas A.; Govender, Nelesh P.; Hamer, Davidson H.; Madhi, Shabir A.; Sankar, Mari Jeeva; Wyres, Kelly L.; Holt, Kathryn E.

klebgenomics/KlebNNS_transmission. (2026) Odih, Erkison Ewomazino; Holt, Kathryn E.

Capsular specificity in temperate phages of Klebsiella pneumoniae is driven by diverse receptor-binding enzymes. (2026) Otwinowska, Aleksandra; Koszucki, Janusz; Panicker, Vyshakh R.; Leconte, Jade; Olejniczak, Sebastian; Holt, Kathryn E.; Feil, Edward J.; Rocha, Eduardo P. C.; Smug, Bogna; Maciejewska, Barbara; Drulis-Kawa, Zuzanna; Mostowy, Rafal J.

Data accompanying the manuscript: Capsular specificity in temperate phages of Klebsiella pneumoniae is driven by diverse receptor-binding enzymes. (2026) Otwinowska, Aleksandra; Koszucki, Janusz; Panicker, Vyshakh R.; Leconte, Jade; Olejniczak, Sebastian; Holt, Kathryn E.; Feil, Edward J; Rocha, Eduardo P.C.; Maciejewska, Barbara; Smug, Bogna; Drulis-Kawa, Zuzanna; Mostowy, Rafal J.

P

Life Identification Numbers: A strain nomenclature approach to aid epidemiological surveillance of bacterial pathogens. (2026) Palma, Federica; Hennart, Melanie; Jolley, Keith A.; Crestani, Chiara; Wyres, Kelly L.; Bridel, Sebastien; Yeats, Corin A.; Brancotte, Bryan; Raffestin, Brice; David, Sophia; Lam, Margaret M.C.; Izdebski, Radosław; Passet, Virginie; Rodrigues, Carla; Rethoret-Pasty, Martin; Combary, Audrey; Cottis, Solene; Maiden, Martin C.J.; Aanensen, David M.; Holt, Kathryn E.; Criscuolo, Alexis; Brisse, Sylvain

Isolates and sequence data included in the study "Transmission dynamics of Klebsiella pneumoniae in a neonatal intensive care unit in Zambia before and after an infection control bundle". (2026) Phillips, Laura T.; Bates, Matthew; Coffin, Susan E.; Foster-Nyarko, Ebenezer; Kapasa, Monica; Machona, Sylvia; Mwananyanda, Lawrence; Mwansa, James C. L.; Musyani, Chileshe L.; Tembo, John M.; Egbe, Franklyn N.; Holt, Kathryn E.; Hamer, Davidson H.

S

Data from Sedda et al. "Designing spatial adaptive surveillance for the emerging malaria vector Anopheles stephensi in East Africa". (2026) Sedda, Luigi; Ochomo, Eric; Tadesse, Fitsum G.; Khaireh, Bouh Abdi

T

Additional file 2 of Whole genome sequencing to inform the epidemiology of Plasmodium falciparum malaria in the elimination setting of Malaysia. (2026) Tan, Mark K. I.; Billows, Nina; Divis, Paul C. S.; Daneshvar, Cyrus; Edgeworth, Jonathan; Singh, Janet Cox; Campino, Susana; Clark, Taane G.

Phlebotomus perniciosus annotation dataset. (2026) Thorpe, Joseph

V

Exploring the IS-capades of Klebsiella pneumoniae: insertion sequences drive metabolic loss in obscure sub-lineages. (2026) Vezina, Ben; White, Claire; Cooper, Helena; Holt, Kathryn E.; Hawkey, Jane; Wyres, Kelly L.; Lam, Margaret M. C.