linfeng-wang/Phylogeny-Guided_GAT

This repository contains the full codebase and data pipeline for detecting positively selected mutations in Mycobacterium tuberculosis using phylogeny-guided Graph Attention Networks (GAT). The method leverages phylogenetic trees and SNP presence patterns to identify adaptive mutations under selection, especially those potentially linked to drug resistance.

Alternative Title

Decoding Positive Selection in Mycobacterium tuberculosis with Graph Attention Networks

Keywords

Mycobacterium tuberculosis