lcerdeira/Pipa

Cerdeira, LORCID logo (2026). lcerdeira/Pipa. [Dataset]. Zenodo. https://doi.org/10.5281/zenodo.19521043
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PIPA is an integrated platform for microbial genomic analysis that supports Illumina, Nanopore, and PacBio sequencing data. It provides a web interface with a Flask backend that orchestrates bioinformatics tools for read trimming, genome assembly, gene prediction, and reporting.

Keywords

microbial genomics

Item Type Dataset
Resource Type
Resource Type
Resource Description
Dataset
C++ code
Capture method Other
Date 12 April 2026
Language(s) of written materials English
Creator(s) Cerdeira, LORCID logo
LSHTM Faculty/Department Faculty of Infectious and Tropical Diseases > Department of Infection Biology
Participating Institutions London School of Hygiene & Tropical Medicine, London, United Kingdom
Date Deposited 13 Apr 2026 08:30
Last Modified 02 Jun 2026 14:02
Publisher Zenodo

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