LSHTM Organisational Structure (3751)

Faculty of Epidemiology and Population Health (2441)

Dept of Infectious Disease Epidemiology (-2023) (825) Data Creators(s) Title Item Type No Grouping

Collection

Vulnerable Newborn Measurement Collaboration. (2022) Blencowe, Hannah; Bradley, Ellen; Lawn, Joy E.; Ohuma, Eric; Okwaraji, Yemi; Suarez Idueta, Lorena; Yargawa, Judith

Codelists for: "Acute cardiovascular events after SARS-CoV-2 infection in England in 2020: a self-controlled case series study". (2022) Davidson, Jennifer; Banerjee, Ami; Smeeth, Liam; Warren-Gash, Charlotte

Codelists for: "Effect of cardiovascular risk profile on severe outcomes of COVID-19 in England in 2020: a population-based cohort study". (2022) Davidson, Jennifer; Mcdonald, Helen; Strongman, Helen; Cadogan, Sharon; Banerjee, Ami; Smeeth, Liam; Warren-Gash, Charlotte

Combined HIV Adolescent Prevention Study (CHAPS). (2022) Webb, Emily

Dataset

epiforecasts/simplified-forecaster-evaluation. (2022) Abbott, Sam; Bosse, Nikos

seabbs/ecdc-weekly-growth-forecasts. (2022) Abbott, Sam; Sherratt, Katharine

Supplementary Material: Climate-sensitive disease outbreaks in the aftermath of extreme climatic events: a scoping review. (2022) Alcayna, Tilly; Fletcher, Isabel; Gibb, Rory; Tremblay, Léo; Funk, Sebastian; Rao, Bhargavi; Lowe, Rachel

katiito/rsvvaccines_amr. (2022) Atkins, Katherine E.; Hodgson, David

Use of motorised transport and pathways to childbirth care in health facilities: Evidence from the 2018 Nigeria Demographic and Health Survey. S1 Data. (2022) Avoka, Cephas Ke-on; Banke-Thomas, Aduragbemi; Beňová, Lenka; Radovich, Emma; Campbell, Oona M. R.

The importance of fine-scale predictors of wild boar habitat use in an isolated population. (2022) Bacigalupo, Sonny; Ruby Chang, Yu-Mei; Dixon, Linda; Gubbins, Simon; Kucharski, Adam J.; Drewe, Julian

Intra-facility_maternal_deaths_Lagos_2018-2019. (2022) Banke-Thomas, Aduragbemi

rosannaclairebarnard/covidm-mtd-Omi. (2022) Barnard, Rosanna C.

mrc-ide/covid-vaccine-impact-orderly. (2022) Barnsley, Gregory; Watson, Oliver J

Causes and outcomes of admission and investigation of tuberculosis in adults with advanced HIV in South African hospitals: data from the TB Fast Track trial. (2022) Beckwith, Peter; Tlali, Mpho; Charalambous, Salome; Churchyard, Gavin J.; Fielding, Katherine; Hoffmann, Christopher J.; Johnson, Suzanne; Wood, Natalie; Grant, Alison D.; Karat, Aaron S. html

ISIDLSHTM/CoBeDOA. (2022) Benest, John

ISIDLSHTM/CoBeDOA_Data. (2022) Benest, John

ISIDLSHTM/Model_Size_Selection. (2022) Benest, John; Rhodes, Sophie; Evans, Thomas G.; White, Richard G.

Data_Sheet_1_Participatory Approach to Develop Evidence-Based Clinical Ethics Guidelines for the Care of COVID-19 Patients: A Mixed Method Study From Nepal. (2022) Bhattarai, Suraj; Adhikari, Anurag; Rayamajhee, Binod; Dhungana, Jaya; Singh, Minu; Koirala, Sarun; Shakya, Dhana Ratna

A summary of data collected from suspected dengue patients included in the study population from Indonesia, Vietnam and the Philippines. (2022) Biggs, Joseph R; Sy, Ava Kristy; Ashall, James; Santoso, Marsha S; Brady, Oliver J; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Tandoc, Amadou O; Sucaldito, Nemia L; Huynh, Kim Mai; Le, Thuy Lien; Hung, Do Thai; Nguyen, Hien Anh Thi; Dang, Duc Anh; Iwasaki, Chihiro; Kitamura, Noriko; Van Loock, Marnix; Herrera-Taracena, Guillermo; Menten, Joris; Rasschaert, Freya; Van Wesenbeeck, Liesbeth; Masyeni, Sri; Haryanto, Sotianingsih; Yohan, Benediktus; Cutiongco-de la Paz, Eva; Yoshida, Lay-Myint; Hue, Stephane; Capeding, Maria Rosario Z; Padilla, Carmencita D; Sasmono, R Tedjo; Hafalla, Julius Clemence R; Hibberd, Martin L

Demographic characteristics of the reporting study population at enrolment. (2022) Biggs, Joseph; Sy, Ava Kristy; Ashall, James; Santoso, Marsha S; Brady, Oliver J; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Tandoc, Amadou O; Sucaldito, Nemia L; Huynh, Kim Mai; Le, Thuy Lien; Hung, Do Thai; Nguyen, Hien Anh Thi; Dang, Duc Anh; Iwasaki, Chihiro; Kitamura, Noriko; Van Loock, Marnix; Herrera-Taracena, Guillermo; Menten, Joris; Rasschaert, Freya; Van Wesenbeeck, Liesbeth; Masyeni, Sri; Haryanto, Sotianingsih; Yohan, Benediktus; Cutiongco-de la Paz, Eva; Yoshida, Lay-Myint; Hue, Stephane; Capeding, Maria Rosario Z; Padilla, Carmencita D; Sasmono, R Tedjo; Hafalla, Julius Clemence R; Hibberd, Martin L

Sensitivity (95%CI) of NS1 RDTs in capturing DENV1-4 infections stratified by immune status among patients from Vietnam (N:1,217). (2022) Biggs, Joseph; Sy, Ava Kristy; Ashall, James; Santoso, Marsha S; Brady, Oliver J; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Tandoc, Amadou O; Sucaldito, Nemia L; Huynh, Kim Mai; Le, Thuy Lien; Hung, Do Thai; Nguyen, Hien Anh Thi; Dang, Duc Anh; Iwasaki, Chihiro; Kitamura, Noriko; Van Loock, Marnix; Herrera-Taracena, Guillermo; Menten, Joris; Rasschaert, Freya; Van Wesenbeeck, Liesbeth; Masyeni, Sri; Haryanto, Sotianingsih; Yohan, Benediktus; Cutiongco-de la Paz, Eva; Yoshida, Lay-Myint; Hue, Stephane; Capeding, Maria Rosario Z; Padilla, Carmencita D; Sasmono, R Tedjo; Hafalla, Julius Clemence R; Hibberd, Martin L

Dataset for calcified NCC (Matapalo area villages). (2022) Bonnet, Gabrielle; Pizzitutti, Francesco; Gonzales-Gustavson, Eloy A.; Gabriël, Sarah; Pan, William K.; Garcia, Hector H.; Bustos, Javier A.; Vilchez, Percy; O’Neal, Seth E.

Dataset for epilepsy figures (Tumbes region). (2022) Bonnet, Gabrielle; Pizzitutti, Francesco; Gonzales-Gustavson, Eloy A.; Gabriël, Sarah; Pan, William K.; Garcia, Hector H.; Bustos, Javier A.; Vilchez, Percy; O’Neal, Seth E.

epiforecasts/covid.german.forecasts. (2022) Bosse, Nikos; Abbott, Sam; Funk, Sebastian

epiforecasts/scoringutils. (2022) Bosse, Nikos; Abbott, Sam; Reich, Nicholas G; Funk, Sebastian

Duration of protection of CoronaVac plus heterologous BNT162b2 booster in the Omicron period in Brazil. (2022) Cerqueira-Silva, Thiago; de Araujo Oliveira, Vinicius; Paixão, Enny S.; Júnior, Juracy Bertoldo; Penna, Gerson O.; Werneck, Guilherme L.; Pearce, Neil; Barreto, Maurício L.; Boaventura, Viviane S.; Barral-Netto, Manoel

Replication Data for: Malaria transmission and prevalence in rice-growing versus non-rice-growing villages in Africa: a systematic review and meta-analysis. (2022) Chan, Kallista; Tusting, Lucy S.; Bottomley, Christian; Saito, Kazuki; Lines, Jo

francescochecchi/mortality_capture_recapture_analysis. (2022) Checchi, Francesco

francescochecchi/acute_malnutrition_predictive_models. (2022) Checchi, Francesco; Frison, Severine; Warsame, Abdihamid

TBVAX Model. (2022) Clark, Rebecca; Mukandavire, Christinah; Weerasuriya, Chathika; Bakker, Roelof; White, Richard G

Projecting the future incidence and burden of dengue in Southeast Asia. (2022) Colón-González, Felipe De Jesus; Gibb, Rory; Khan, Kamran; Watts, Alexander; Lowe, Rachel; Brady, Oliver J.

emilyherrett/qrisk_cprd_aurum: QRISK Aurum bundle version 2.0. (2022) Davidson, Jennifer; Herrett, Emily; Strongman, Helen; Gadd, Sarah

Additional file 1 of Characterising social contacts under COVID-19 control measures in Africa. (2022) Dobreva, Zlatina; Gimma, Amy; Rohan, Hana; Djoudalbaye, Benjamin; Tshangela, Akhona; Jarvis, Christopher I.; Van Zandvoort, Kevin; Quaife, Matthew

akira-endo/reanalysis_Fukumoto2021: 'Not finding causal effect' is not 'finding no causal effect' of school closure on COVID-19. (2022) Endo, Akira

akira-endo/monkeypox_heavytail: Heavy-tailed sexual contact networks and the epidemiology of monkeypox outbreak in non-endemic regions. (2022) Endo, Akira; Murayama, Hiroaki; Abbott, Sam; Ratnayake, Ruwan; Pearson, Carl A. B.; Edmunds, W. John; Fearon, Elizabeth; Funk, Sebastian

akira-endo/schooldynamics_FluMatsumoto14-15: Simulating respiratory disease transmission within and between classrooms to assess pandemic management strategies at schools. (2022) Endo, Akira; Uchida, Mitsuo; Liu, Yang; Atkins, Katherine E.; Kucharski, Adam J.; Funk, Sebastian

EmilieFinch/covid-reinfection. (2022) Finch, Emilie; Kucharski, Adam J.

Viet Nam tuberculosis prevalence survey: equity analysis code. (2022) Foster, Nicola; Nguyen, Hai V; Nguyen, Nhung V; Nguyen, Hoa B; Cobelens, Frank; Tiemersma, Edine W; Quaife, Matthew; Houben, Rein description

Social contact data for Taiwan. (2022) Fu, Yang-Chih; Wang, Da-Wei; Chuang, Jen-Hsiang; Fu, Han

epiforecasts/ons_severity_estimates. (2022) Funk, Sebastian

hamishgibbs/facebook_population_2020_2021. (2022) Gibbs, Hamish; Waterlow, Naomi R.; Cheshire, James; Danon, Leon; Liu, Yang; Grundy, Chris; Kucharski, Adam J.; Eggo, Rosalind M.

99% credible set SNPs for leprosy association at chromosome 10q24. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Analysis of pleiotropy at the leprosy association at chromosome 10q24. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Association statistics for imputed classical HLA alleles and leprosy risk in Malawi and Mali. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Chromatin state at chromosome 10q24. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Genome-wide association study of leprosy in Malawi and Mali. S2 Table. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Leprosy association statistics for suggestive associations in Malawi. S1 Table. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Regulatory function at the chromosome 10q24 leprosy association. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali stratified by multibacillary and paucibacillary disease. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

SNP quality control summary in Malawi and Mali. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Sample quality control summary in Malawi and Mali. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Selection signatures at chromosome 10q24. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Study populations and leprosy association statistics at rs2015583 in the Chinese replication analysis. (2022) Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Mean contacts by age and date. (2022) Gimma, Amy; Munday, James D.; Wong, Kerry L. M.; Coletti, Pietro; Van Zandvoort, Kevin; Prem, Kiesha; Klepac, Petra; Rubin, G. James; Funk, Sebastian; Edmunds, W. John; Jarvis, Christopher I.

CoMix social contact data (Croatia). (2022) Gimma, Amy; Wong, Kerry LM; Coletti, Pietro; Jarvis, Christopher I.

CoMix social contact data (Finland). (2022) Gimma, Amy; Wong, Kerry LM; Coletti, Pietro; Jarvis, Christopher I.

CoMix social contact data (Hungary). (2022) Gimma, Amy; Wong, Kerry LM; Coletti, Pietro; Jarvis, Christopher I.

CoMix social contact data (Lithuania). (2022) Gimma, Amy; Wong, Kerry LM; Coletti, Pietro; Jarvis, Christopher I.

CoMix social contact data (Slovakia). (2022) Gimma, Amy; Wong, Kerry LM; Coletti, Pietro; Jarvis, Christopher I.

CoMix social contact data (Switzerland). (2022) Gimma, Amy; Wong, Kerry LM; Coletti, Pietro; Jarvis, Christopher I.

CoMix social contact data (Estonia). (2022) Gimma, Amy; Wong, Kerry Lm; Coletti, Pietro; Jarvis, Christopher I.

Qualitative and Quantitative Data for Tuberculosis Infection Prevention and Control in KwaZulu-Natal and Western Cape, South Africa, 2018-2021. (2022) Grant, Alison D.; Kielmann, Karina

Rekyt/funrar. (2022) Grenié, Matthias; Gruson, Hugo; Silge, Julia; Tucker, Caroline

fundiversity: Easy Computation of Functional Diversity Indices. (2022) Gruson, Hugo; Grenié, Matthias

Bisaloo/asymptor. (2022) Gruson, Hugo; actions-user

dchodge/hero-study: Version submitted with WOR reviewers comments. (2022) Hodgson, David; Abbott, Sam

Additional file 1 of Evaluating the effects of supplementing ward nurses on quality of newborn care in Kenyan neonatal units: protocol for a prospective workforce intervention study. (2022) Imam, Abdulazeez; Gathara, David; Aluvaala, Jalemba; Maina, Michuki; English, Mike

Circulation of respiratory viruses during the COVID-19 pandemic in the Gambia. (2022) Jarju, Sheikh; Senghore, Elina; Brotherton, Helen; Saidykhan, Alasana; Jallow, Samba; Krubally, Ebrima; Sinjanka, Edrisa; Ndene, Morris Ngor; Bajo, Fabakary; Sanyang, Musa M; Saidy, Binta; Bah, Alasana; Mohammed, Nuredin I; Forrest, Karen; Clarke, Ed; Dalessandro, Umberto; Sesay, Abdul Karim; Usuf, Effua; Cerami, Carla; Roca, Anna; Kampmann, Beate; De silva, Thushan

epiverse-trace/blueprints: 0.0.2. (2022) Jombart, Thibaut; actions-user; Gruson, Hugo; Pavlich-Mariscal, Jaime

shk313/diagnostic-test-metaanalysis/CrAg. (2022) Keddie, Suzanne

Stan models for diagnostic tests accuracy simulation; Accompaniment for Journal Article. (2022) Keddie, Suzanne; Bärenbold, Oliver; Keogh, Ruth; Bradley, John

Additional file 1 of Clinical, metabolic, and immunological characterisation of adult Ugandan patients with new-onset diabetes and low vitamin D status. (2022) Kibirige, Davis; Sekitoleko, Isaac; Balungi, Priscilla; Kyosiimire-Lugemwa, Jacqueline; Lumu, William

Additional file 3 of Influence of testing modality on bioefficacy for the evaluation of Interceptor® G2 mosquito nets to combat malaria mosquitoes in Tanzania. (2022) Kibondo, Ummi Abdul; Odufuwa, Olukayode G.; Ngonyani, Saphina H.; Mpelepele, Ahmadi B.; Matanilla, Issaya; Ngonyani, Hassan; Makungwa, Noel O.; Mseka, Antony P.; Swai, Kyeba; Ntabaliba, Watson; Stutz, Susanne; Austin, James W.; Moore, Sarah Jane

skiniry/Trips-Viz. (2022) Kiniry, Stephen J; Judge, Ciara

ALPHA HIV Incidence and Mortality Data, Kisesa 1994-2016. (2022) Kisesa HIV Open Cohort study; ALPHA Network

gwenknight/strain_growth. (2022) Knight, Gwen; Baede, Valérie O.

mbkoltai/RSV-resurgence-model. (2022) Koltai, Mihaly; Krauer, Fabienne

fkrauer/RSV-seasonality-public. (2022) Krauer, Fabienne

qleclerc/mrsa_phage_dynamics. (2022) Leclerc, Quentin J.

sophie-a-lee/spatial_smooth_framework: Data and R code to accompany 'A Bayesian modelling framework to quantify multiple sources of spatial variation for disease mapping'. (2022) Lee, Sophie A.

yangclaraliu/COVID_Vac_Delay. (2022) Liu, Yang

Stan code and input data for estimating adjusted seroprevalence. (2022) Lucinde, Ruth K.; Mugo, Daisy; Bottomley, Christian; Karani, Angela; Gardiner, Elizabeth; Aziza, Rabia; Gitonga, John N.; Karanja, Henry; Nyagwange, James; Tuju, James; Wanjiku, Perpetual; Nzomo, Edward; Kamuri, Evans; Thuranira, Kaugiria; Agunda, Sarah; Nyutu, Gideon; Etyang, Anthony O.; Adetifa, Ifedayo M. O.; Kagucia, Eunice; Uyoga, Sophie; Otiende, Mark; Otieno, Edward; Ndwiga, Leonard; Agoti, Charles N.; Aman, Rashid A.; Mwangangi, Mercy; Amoth, Patrick; Kasera, Kadondi; Nyaguara, Amek; Ng’ang’a, Wangari; Ochola, Lucy B.; Namdala, Emukule; Gaunya, Oscar; Okuku, Rosemary; Barasa, Edwine; Bejon, Philip; Tsofa, Benjamin; Ochola-Oyier, L. Isabella; Warimwe, George M.; Agweyu, Ambrose; Scott, J. Anthony G.; Gallagher, Katherine E.

Respondent-Driven Sampling and Total Population Data from a Rural Ugandan Cohort, 2010: Special Licence Access. (2022) MRC/UVRI; White, Richard

Cape Town social contact data. (2022) McCreesh, Nicky; Middelkoop, Keren; Mohlamonyane, Mbali grid_on

Additional file 1 of Inequalities in the impact of COVID-19-associated disruptions on tuberculosis diagnosis by age and sex in 45 high TB burden countries. (2022) McQuaid, C. Finn; Henrion, Marc Y. R.; Burke, Rachael M.; MacPherson, Peter; Nzawa-Soko, Rebecca; Horton, Katherine C.

epiforecasts/covid19-hospital-activity. (2022) Meakin, Sophie; Abbott, Sam

Code for analysis of mosquito microbiota data. (2022) Messenger, Louisa A.; Pelloquin, Bethanie

Additional file 2 of Lack of an association between dietary patterns and adiposity among primary school children in Kilimanjaro Tanzania. (2022) Mosha, Mary Vincent; Paulo, Heavenlight A.; Msuya, Sia E.; Grosskurth, Heiner; Filteau, Suzanne

Summary characteristics of AGYW by schooling status at baseline and by invitation to DREAMS. (2022) Mulwa, Sarah; Chimoyi, Lucy; Agbla, Schadrac; Osindo, Jane; Wambiya, Elvis O; Gourlay, Annabelle; Birdthistle, Isolde; Ziraba, Abdhalah; Floyd, Sian

Weekly CoMix contact matrices for UKHSA COVID-19 dashboard and ONS COVID-19 infection survey age-groups. (2022) Munday, James D.; Jarvis, Christopher I.; Gimma, Amy; Wong, Kerry LM; Van Zandvoort, Kevin; Funk, Sebastian; Edmunds, W John

Supporting files for: "Individual, health facility and wider health system factors contributing to maternal deaths in Africa: A scoping review". (2022) Muriithi, Francis G.; Banke-Thomas, Aduragbemi; Gakuo, Ruth; Pope, Kia; Coomarasamy, Arri; Gallos, Ioannis D.

Achieving good health with low environmental footprint - A comparison of national indicators dataset. (2022) Mustard, Connor; Haines, Andrew; Belesova, Kristine; Cousens, Simon

kath-o-reilly/wbe_prevalence_england_python. (2022) O'Reilly, Kathleen M.

Supplementary appendix 1b of Oliphant NP, Ray N, Curtis A et al. Optimising scale and deployment of community health workers in Sierra Leone: a geospatial analysis. 2022. (2022) Oliphant, NP; Ray, Nicolas; Curtis, Andrew; Musa, Elizabeth; Sesay, Momodou; Kandeh, Joseph; Kamara, Anitta; Chimoun, Ebeny Francois Temgbait; Jackson, Debra; Doherty, Tanya

Supplementary appendix 1b of Oliphant NP, Ray N, Curtis A et al. Optimizing scale and deployment of CHWs in Sierra Leone: a geospatial analysis. 2021. (2022) Oliphant, NP; Ray, Nicolas; Curtis, Andrew; Musa, Elizabeth; Sesay, Momodou; Kandeh, Joseph; Kamara, Anitta; Chimoun, Ebeny Francois Temgbait; Jackson, Debra; Doherty, Tanya

cmmid/SA2UK: CEA submission. (2022) Pearson, Carl A. B.; Russell, Timothy W.; Kucharski, Adam J.

rachaelpung/cruise_networks. (2022) Pung, Rachael

GeorgeYQian/Nha-Trang-Contact-Study-Data-and-Code. (2022) Qian, George Y.; Clifford, Samuel; Flasche, Stefan; Papastylianou, Tasos

erees/leptoSerology. (2022) Rees, Eleanor

Adherence to additional medication for management of HIV-associated comorbidities among older children and adolescents taking antiretroviral therapy. S1 Data. (2022) Rehman, Andrea M.; Simms, Victoria; McHugh, Grace; Mujuru, Hilda; Ngwira, Lucky G.; Semphere, Robina; Moyo, Brewster; Bandason, Tsitsi; Odland, Jon O.; Ferrand, Rashida A.

alxsrobert/evd-transmission-trees. (2022) Robert, Alexis

Field entomology data from Ethiopian trachoma population survey and laboratory transmission experiments for Musca sorbens and Chlamydia trachomatis. (2022) Robinson, Ailie; Versteeg, Bart; Shafi Abdurahman, Oumer; Clatworthy, Innes; Shuka, Gemeda; Debe, Dereje; Hordofa, Gebreyes; Reis de Oliveira Gomes, Laura; Abraham Aga, Muluadam; Dumessa, Gebeyehu; Sarah, Virginia; Macleod, David; Last, Anna R.; Burton, Matthew J.; Logan, James G. folder_zip

Additional file 1 of Did you hear about HIV self-testing? HIV self-testing awareness after community-based HIVST distribution in rural Zimbabwe. (2022) Rotsaert, Anke; Sibanda, Euphemia; Hatzold, Karin; Johnson, Cheryl; Corbett, Elizabeth; Neuman, Melissa; Cowan, Frances

Estimating national-level measles case–fatality ratios in low-income and middle-income countries: an updated systematic review and modelling study. (2022) Sbarra, Alyssa N.; Mosser, Jonathan F; Jit, Mark; Ferrari, Matthew; Ramshaw, Rebecca E.; O'Connor, Patrick; Krause, L Kendall; Rogowski, Emma LB; Portnoy, Allison

Depressive symptoms and HIV risk behaviours among adolescents enrolled in the HPTN071 (PopART) trial in Zambia and South Africa. Aggregate dataset. (2022) Shanaube, Kwame; Gachie, Thomas; Hoddinott, Graeme; Schaap, Albertus; Floyd, Sian; Mainga, Tila; Bond, Virginia; Hayes, Richard; Fidler, Sarah; Ayles, Helen

covid19-forecast-hub-europe/euro-hub-ensemble: Zenodo release. (2022) Sherratt, Katharine; Funk, Sebastian

Data for: Expert review of images from hand-held colposcopy in Zambian women with genital schistosomiasis. (2022) Sturt, Amy; Webb, Emily; Bristowe, Henrietta; Bustinduy, Amaya

Data for: “The presence of hemoglobin in cervicovaginal lavage is not associated with genital schistosomiasis in Zambian women from the BILHIV study”. (2022) Sturt, Amy; Webb, Emily; Bustinduy, Amaya description

tomsumner/Variance_SA_TB. (2022) Sumner, Tom

Hand Hygiene Social Norms among Healthcare Workers During Early COVID-19: Results of a Global Survey. (2022) Szekely, Aron; Gon, Giorgia; Lowe, Hattie; Tosi, Marco

Focus group discussion transcripts. (2022) Tewahido, Dagmawit; Worku, Alemayehu; Tadesse, Amare W.; Gulema, Hanna; Berhane, Yemane

deusthindwa/social.contact.rates.estimation.hiv.malawi. (2022) Thindwa, Deus; Jambo, Kondwani C.; Ojal, John; MacPherson, Peter; Dennis Phiri, Mphatso; Pinsent, Amy; Khundi, Mcewen; Chiume, Lingstone; Gallagher, Katherine E.; Heyderman, Robert S.; Corbett, Elizabeth L.; French, Neil; Flasche, Stefan

Additional file 2 of Cluster randomised trials with a binary outcome and a small number of clusters: comparison of individual and cluster level analysis method. (2022) Thompson, Jennifer A.; Leyrat, Clemence; Fielding, Katherine L.; Hayes, Richard J.

Dataset: Cash transfer project. (2022) Timire, Collins; Sandy, Charles; Ferrand, Rashida A.; Mubau, Regina; Shiri, Peter; Mbiriyawanda, Obert; Mbiba, Fredrick; Houben, Rein M. G. J.; Pedrazzoli, Debora; Bond, Virginia; Foster, Nicola; Kranzer, Katharina

Social contacts and other risk factors for respiratory infections among internally displaced people in Somaliland. Data and analyses. (2022) Van Zandvoort, Kevin; Bobe, Mohamed Omer; Hassan, Abdirahman Ibrahim; Abdi, Mohamed Ismail; Ahmed, Mohammed Saed; Soleman, Saeed Mohamood; Warsame, Mohamed Yusuf; Wais, Muna Awil; Diggle, Emma; Satzke, Catherine; Mulholland, Kim; Egeh, Mohamed Mohamoud; Hassan, Mukhtar Muhumed; Hergeeye, Mohamed Abdi; Eggo, Rosalind M.; Checchi, Francesco; Flasche, Stefan; Mcgowan, Catherine R.

NaomiWaterlow/NextGenFlu_Kenya. (2022) Waterlow, Naomi

NaomiWaterlow/NhaTrang_flu_rsv_interaction. (2022) Waterlow, Naomi

Combined HIV Adolescent Prevention Study (CHAPS): qualitative survey data. (2022) Webb, Emily html

weerasuriya/tbconvax-pcb. (2022) Weerasuriya, Chathika Krishan

lshtm-tbmg/tbvax-pub. (2022) Weerasuriya, Chathika; Clark, Rebecca

Data for: "Menstrual health intervention and school attendance in Uganda (MENISCUS-2): A pilot intervention study". (2022) Weiss, Helen description

covid19-forecast-hub-europe/covid19-forecast-hub-europe. (2022) actions-user; Sherratt, Katharine; Gruson, Hugo; Funk, Sebastian; Bracher, Johannes; BIOCOM-SC; Walraven, Robert; miraanto; h-veronika; Rodiah, Isti; gr3gr3; Kraus, David; hgurung-iem; epiforecasts-bot; Xu, Frost Tianjian; Heyder, Stefan; aniruddhadiga; Abbott, Sam; Sun, Tao; Mingio, Marco; Deuschel, Jannik; pmontman; janezz25; neele-itwm; Gibson, Graham; EpiGraph; Tarantino, Barbara; Karlen, Dean; Bhatia, Sangeeta; borjarv

kevinvzandvoort/espicc-somaliland-digaale-survey-2019. (2022) van zandvoort, Kevin; Bobe, Mohamed Omer; Hassan, Abdirahman Ibrahim; Abdi, Mohamed Ismail; Ahmed, Mohammed Saed; Soleman, Saeed Mohamood; Warsame, Mohamed Yusuf; Wais, Muna Awil; Diggle, Emma; McGowan, Catherine R; Satzke, Catherine; Mulholland, Kim; Egeh, Mohamed Mohamoud; Hassan, Mukhtar Muhumed; Hergeeye, Mohamed Abdi; Eggo, Rosalind M; Checchi, Francesco; Flasche, Stefan