LSHTM Organisational Structure (3741)

Faculty of Epidemiology and Population Health (2438)

Dept of Infectious Disease Epidemiology (-2023) (826) Data Creators(s) Title Item Type No Grouping

Collection

Vulnerable Newborn Measurement Collaboration. (2022) Blencowe, Hannah, Bradley, Ellen, Lawn, Joy E., Ohuma, Eric, Okwaraji, Yemi, Suarez Idueta, Lorena, Yargawa, Judith

Codelists for: "Acute cardiovascular events after SARS-CoV-2 infection in England in 2020: a self-controlled case series study". (2022) Davidson, Jennifer, Banerjee, Ami, Smeeth, Liam, Warren-Gash, Charlotte

Codelists for: "Effect of cardiovascular risk profile on severe outcomes of COVID-19 in England in 2020: a population-based cohort study". (2022) Davidson, Jennifer, Mcdonald, Helen, Strongman, Helen, Cadogan, Sharon, Banerjee, Ami, Smeeth, Liam, Warren-Gash, Charlotte

Combined HIV Adolescent Prevention Study (CHAPS). (2022) Webb, Emily

Dataset

epiforecasts/simplified-forecaster-evaluation. (2022) Abbott, Sam, Bosse, Nikos

seabbs/ecdc-weekly-growth-forecasts. (2022) Abbott, Sam, Sherratt, Katharine

Supplementary Material: Climate-sensitive disease outbreaks in the aftermath of extreme climatic events: a scoping review. (2022) Alcayna, Tilly, Fletcher, Isabel, Gibb, Rory, Tremblay, Léo, Funk, Sebastian, Rao, Bhargavi, Lowe, Rachel

katiito/rsvvaccines_amr. (2022) Atkins, Katherine E., Hodgson, David

Use of motorised transport and pathways to childbirth care in health facilities: Evidence from the 2018 Nigeria Demographic and Health Survey. S1 Data. (2022) Avoka, Cephas Ke-on, Banke-Thomas, Aduragbemi, Beňová, Lenka, Radovich, Emma, Campbell, Oona M. R.

The importance of fine-scale predictors of wild boar habitat use in an isolated population. (2022) Bacigalupo, Sonny, Ruby Chang, Yu-Mei, Dixon, Linda, Gubbins, Simon, Kucharski, Adam J., Drewe, Julian

Intra-facility_maternal_deaths_Lagos_2018-2019. (2022) Banke-Thomas, Aduragbemi

rosannaclairebarnard/covidm-mtd-Omi. (2022) Barnard, Rosanna C.

mrc-ide/covid-vaccine-impact-orderly. (2022) Barnsley, Gregory, Watson, Oliver J

Causes and outcomes of admission and investigation of tuberculosis in adults with advanced HIV in South African hospitals: data from the TB Fast Track trial. (2022) Beckwith, Peter, Tlali, Mpho, Charalambous, Salome, Churchyard, Gavin J., Fielding, Katherine, Hoffmann, Christopher J., Johnson, Suzanne, Wood, Natalie, Grant, Alison D., Karat, Aaron S. html

ISIDLSHTM/CoBeDOA. (2022) Benest, John

ISIDLSHTM/CoBeDOA_Data. (2022) Benest, John

ISIDLSHTM/Model_Size_Selection. (2022) Benest, John, Rhodes, Sophie, Evans, Thomas G., White, Richard G.

Data_Sheet_1_Participatory Approach to Develop Evidence-Based Clinical Ethics Guidelines for the Care of COVID-19 Patients: A Mixed Method Study From Nepal. (2022) Bhattarai, Suraj, Adhikari, Anurag, Rayamajhee, Binod, Dhungana, Jaya, Singh, Minu, Koirala, Sarun, Shakya, Dhana Ratna

A summary of data collected from suspected dengue patients included in the study population from Indonesia, Vietnam and the Philippines. (2022) Biggs, Joseph R, Sy, Ava Kristy, Ashall, James, Santoso, Marsha S, Brady, Oliver J, Reyes, Mary Anne Joy, Quinones, Mary Ann, Jones-Warner, William, Tandoc, Amadou O, Sucaldito, Nemia L, Huynh, Kim Mai, Le, Thuy Lien, Hung, Do Thai, Nguyen, Hien Anh Thi, Dang, Duc Anh, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Menten, Joris, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Masyeni, Sri, Haryanto, Sotianingsih, Yohan, Benediktus, Cutiongco-de la Paz, Eva, Yoshida, Lay-Myint, Hue, Stephane, Capeding, Maria Rosario Z, Padilla, Carmencita D, Sasmono, R Tedjo, Hafalla, Julius Clemence R, Hibberd, Martin L

Demographic characteristics of the reporting study population at enrolment. (2022) Biggs, Joseph, Sy, Ava Kristy, Ashall, James, Santoso, Marsha S, Brady, Oliver J, Reyes, Mary Anne Joy, Quinones, Mary Ann, Jones-Warner, William, Tandoc, Amadou O, Sucaldito, Nemia L, Huynh, Kim Mai, Le, Thuy Lien, Hung, Do Thai, Nguyen, Hien Anh Thi, Dang, Duc Anh, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Menten, Joris, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Masyeni, Sri, Haryanto, Sotianingsih, Yohan, Benediktus, Cutiongco-de la Paz, Eva, Yoshida, Lay-Myint, Hue, Stephane, Capeding, Maria Rosario Z, Padilla, Carmencita D, Sasmono, R Tedjo, Hafalla, Julius Clemence R, Hibberd, Martin L

Sensitivity (95%CI) of NS1 RDTs in capturing DENV1-4 infections stratified by immune status among patients from Vietnam (N:1,217). (2022) Biggs, Joseph, Sy, Ava Kristy, Ashall, James, Santoso, Marsha S, Brady, Oliver J, Reyes, Mary Anne Joy, Quinones, Mary Ann, Jones-Warner, William, Tandoc, Amadou O, Sucaldito, Nemia L, Huynh, Kim Mai, Le, Thuy Lien, Hung, Do Thai, Nguyen, Hien Anh Thi, Dang, Duc Anh, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Menten, Joris, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Masyeni, Sri, Haryanto, Sotianingsih, Yohan, Benediktus, Cutiongco-de la Paz, Eva, Yoshida, Lay-Myint, Hue, Stephane, Capeding, Maria Rosario Z, Padilla, Carmencita D, Sasmono, R Tedjo, Hafalla, Julius Clemence R, Hibberd, Martin L

Dataset for calcified NCC (Matapalo area villages). (2022) Bonnet, Gabrielle, Pizzitutti, Francesco, Gonzales-Gustavson, Eloy A., Gabriël, Sarah, Pan, William K., Garcia, Hector H., Bustos, Javier A., Vilchez, Percy, O’Neal, Seth E.

Dataset for epilepsy figures (Tumbes region). (2022) Bonnet, Gabrielle, Pizzitutti, Francesco, Gonzales-Gustavson, Eloy A., Gabriël, Sarah, Pan, William K., Garcia, Hector H., Bustos, Javier A., Vilchez, Percy, O’Neal, Seth E.

epiforecasts/covid.german.forecasts. (2022) Bosse, Nikos, Abbott, Sam, Funk, Sebastian

epiforecasts/scoringutils. (2022) Bosse, Nikos, Abbott, Sam, Reich, Nicholas G, Funk, Sebastian

Duration of protection of CoronaVac plus heterologous BNT162b2 booster in the Omicron period in Brazil. (2022) Cerqueira-Silva, Thiago, de Araujo Oliveira, Vinicius, Paixão, Enny S., Júnior, Juracy Bertoldo, Penna, Gerson O., Werneck, Guilherme L., Pearce, Neil, Barreto, Maurício L., Boaventura, Viviane S., Barral-Netto, Manoel

Replication Data for: Malaria transmission and prevalence in rice-growing versus non-rice-growing villages in Africa: a systematic review and meta-analysis. (2022) Chan, Kallista, Tusting, Lucy S., Bottomley, Christian, Saito, Kazuki, Lines, Jo

francescochecchi/mortality_capture_recapture_analysis. (2022) Checchi, Francesco

francescochecchi/acute_malnutrition_predictive_models. (2022) Checchi, Francesco, Frison, Severine, Warsame, Abdihamid

TBVAX Model. (2022) Clark, Rebecca, Mukandavire, Christinah, Weerasuriya, Chathika, Bakker, Roelof, White, Richard G

Projecting the future incidence and burden of dengue in Southeast Asia. (2022) Colón-González, Felipe De Jesus, Gibb, Rory, Khan, Kamran, Watts, Alexander, Lowe, Rachel, Brady, Oliver J.

emilyherrett/qrisk_cprd_aurum: QRISK Aurum bundle version 2.0. (2022) Davidson, Jennifer, Herrett, Emily, Strongman, Helen, Gadd, Sarah

Additional file 1 of Characterising social contacts under COVID-19 control measures in Africa. (2022) Dobreva, Zlatina, Gimma, Amy, Rohan, Hana, Djoudalbaye, Benjamin, Tshangela, Akhona, Jarvis, Christopher I., Van Zandvoort, Kevin, Quaife, Matthew

akira-endo/reanalysis_Fukumoto2021: 'Not finding causal effect' is not 'finding no causal effect' of school closure on COVID-19. (2022) Endo, Akira

akira-endo/monkeypox_heavytail: Heavy-tailed sexual contact networks and the epidemiology of monkeypox outbreak in non-endemic regions. (2022) Endo, Akira, Murayama, Hiroaki, Abbott, Sam, Ratnayake, Ruwan, Pearson, Carl A. B., Edmunds, W. John, Fearon, Elizabeth, Funk, Sebastian

akira-endo/schooldynamics_FluMatsumoto14-15: Simulating respiratory disease transmission within and between classrooms to assess pandemic management strategies at schools. (2022) Endo, Akira, Uchida, Mitsuo, Liu, Yang, Atkins, Katherine E., Kucharski, Adam J., Funk, Sebastian

EmilieFinch/covid-reinfection. (2022) Finch, Emilie, Kucharski, Adam J.

Viet Nam tuberculosis prevalence survey: equity analysis code. (2022) Foster, Nicola, Nguyen, Hai V, Nguyen, Nhung V, Nguyen, Hoa B, Cobelens, Frank, Tiemersma, Edine W, Quaife, Matthew, Houben, Rein description

Social contact data for Taiwan. (2022) Fu, Yang-Chih, Wang, Da-Wei, Chuang, Jen-Hsiang, Fu, Han

epiforecasts/ons_severity_estimates. (2022) Funk, Sebastian

hamishgibbs/facebook_population_2020_2021. (2022) Gibbs, Hamish, Waterlow, Naomi R., Cheshire, James, Danon, Leon, Liu, Yang, Grundy, Chris, Kucharski, Adam J., Eggo, Rosalind M.

99% credible set SNPs for leprosy association at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Analysis of pleiotropy at the leprosy association at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Association statistics for imputed classical HLA alleles and leprosy risk in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Chromatin state at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Genome-wide association study of leprosy in Malawi and Mali. S2 Table. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Leprosy association statistics for suggestive associations in Malawi. S1 Table. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Regulatory function at the chromosome 10q24 leprosy association. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali stratified by multibacillary and paucibacillary disease. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

SNP quality control summary in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Sample quality control summary in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Selection signatures at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Study populations and leprosy association statistics at rs2015583 in the Chinese replication analysis. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Mean contacts by age and date. (2022) Gimma, Amy, Munday, James D., Wong, Kerry L. M., Coletti, Pietro, Van Zandvoort, Kevin, Prem, Kiesha, Klepac, Petra, Rubin, G. James, Funk, Sebastian, Edmunds, W. John, Jarvis, Christopher I.

CoMix social contact data (Croatia). (2022) Gimma, Amy, Wong, Kerry LM, Coletti, Pietro, Jarvis, Christopher I.

CoMix social contact data (Finland). (2022) Gimma, Amy, Wong, Kerry LM, Coletti, Pietro, Jarvis, Christopher I.

CoMix social contact data (Hungary). (2022) Gimma, Amy, Wong, Kerry LM, Coletti, Pietro, Jarvis, Christopher I.

CoMix social contact data (Lithuania). (2022) Gimma, Amy, Wong, Kerry LM, Coletti, Pietro, Jarvis, Christopher I.

CoMix social contact data (Slovakia). (2022) Gimma, Amy, Wong, Kerry LM, Coletti, Pietro, Jarvis, Christopher I.

CoMix social contact data (Switzerland). (2022) Gimma, Amy, Wong, Kerry LM, Coletti, Pietro, Jarvis, Christopher I.

CoMix social contact data (Estonia). (2022) Gimma, Amy, Wong, Kerry Lm, Coletti, Pietro, Jarvis, Christopher I.

Qualitative and Quantitative Data for Tuberculosis Infection Prevention and Control in KwaZulu-Natal and Western Cape, South Africa, 2018-2021. (2022) Grant, Alison D., Kielmann, Karina

Rekyt/funrar. (2022) Grenié, Matthias, Gruson, Hugo, Silge, Julia, Tucker, Caroline

fundiversity: Easy Computation of Functional Diversity Indices. (2022) Gruson, Hugo, Grenié, Matthias

Bisaloo/asymptor. (2022) Gruson, Hugo, actions-user

dchodge/hero-study: Version submitted with WOR reviewers comments. (2022) Hodgson, David, Abbott, Sam

Additional file 1 of Evaluating the effects of supplementing ward nurses on quality of newborn care in Kenyan neonatal units: protocol for a prospective workforce intervention study. (2022) Imam, Abdulazeez, Gathara, David, Aluvaala, Jalemba, Maina, Michuki, English, Mike

Circulation of respiratory viruses during the COVID-19 pandemic in the Gambia. (2022) Jarju, Sheikh, Senghore, Elina, Brotherton, Helen, Saidykhan, Alasana, Jallow, Samba, Krubally, Ebrima, Sinjanka, Edrisa, Ndene, Morris Ngor, Bajo, Fabakary, Sanyang, Musa M, Saidy, Binta, Bah, Alasana, Mohammed, Nuredin I, Forrest, Karen, Clarke, Ed, Dalessandro, Umberto, Sesay, Abdul Karim, Usuf, Effua, Cerami, Carla, Roca, Anna, Kampmann, Beate, De silva, Thushan

epiverse-trace/blueprints: 0.0.2. (2022) Jombart, Thibaut, actions-user, Gruson, Hugo, Pavlich-Mariscal, Jaime

shk313/diagnostic-test-metaanalysis/CrAg. (2022) Keddie, Suzanne

Stan models for diagnostic tests accuracy simulation; Accompaniment for Journal Article. (2022) Keddie, Suzanne, Bärenbold, Oliver, Keogh, Ruth, Bradley, John

Additional file 1 of Clinical, metabolic, and immunological characterisation of adult Ugandan patients with new-onset diabetes and low vitamin D status. (2022) Kibirige, Davis, Sekitoleko, Isaac, Balungi, Priscilla, Kyosiimire-Lugemwa, Jacqueline, Lumu, William

Additional file 3 of Influence of testing modality on bioefficacy for the evaluation of Interceptor® G2 mosquito nets to combat malaria mosquitoes in Tanzania. (2022) Kibondo, Ummi Abdul, Odufuwa, Olukayode G., Ngonyani, Saphina H., Mpelepele, Ahmadi B., Matanilla, Issaya, Ngonyani, Hassan, Makungwa, Noel O., Mseka, Antony P., Swai, Kyeba, Ntabaliba, Watson, Stutz, Susanne, Austin, James W., Moore, Sarah Jane

skiniry/Trips-Viz. (2022) Kiniry, Stephen J, Judge, Ciara

ALPHA HIV Incidence and Mortality Data, Kisesa 1994-2016. (2022) Kisesa HIV Open Cohort study, ALPHA Network

gwenknight/strain_growth. (2022) Knight, Gwen, Baede, Valérie O.

mbkoltai/RSV-resurgence-model. (2022) Koltai, Mihaly, Krauer, Fabienne

fkrauer/RSV-seasonality-public. (2022) Krauer, Fabienne

qleclerc/mrsa_phage_dynamics. (2022) Leclerc, Quentin J.

sophie-a-lee/spatial_smooth_framework: Data and R code to accompany 'A Bayesian modelling framework to quantify multiple sources of spatial variation for disease mapping'. (2022) Lee, Sophie A.

yangclaraliu/COVID_Vac_Delay. (2022) Liu, Yang

Stan code and input data for estimating adjusted seroprevalence. (2022) Lucinde, Ruth K., Mugo, Daisy, Bottomley, Christian, Karani, Angela, Gardiner, Elizabeth, Aziza, Rabia, Gitonga, John N., Karanja, Henry, Nyagwange, James, Tuju, James, Wanjiku, Perpetual, Nzomo, Edward, Kamuri, Evans, Thuranira, Kaugiria, Agunda, Sarah, Nyutu, Gideon, Etyang, Anthony O., Adetifa, Ifedayo M. O., Kagucia, Eunice, Uyoga, Sophie, Otiende, Mark, Otieno, Edward, Ndwiga, Leonard, Agoti, Charles N., Aman, Rashid A., Mwangangi, Mercy, Amoth, Patrick, Kasera, Kadondi, Nyaguara, Amek, Ng’ang’a, Wangari, Ochola, Lucy B., Namdala, Emukule, Gaunya, Oscar, Okuku, Rosemary, Barasa, Edwine, Bejon, Philip, Tsofa, Benjamin, Ochola-Oyier, L. Isabella, Warimwe, George M., Agweyu, Ambrose, Scott, J. Anthony G., Gallagher, Katherine E.

Respondent-Driven Sampling and Total Population Data from a Rural Ugandan Cohort, 2010: Special Licence Access. (2022) MRC/UVRI, White, Richard

Cape Town social contact data. (2022) McCreesh, Nicky, Middelkoop, Keren, Mohlamonyane, Mbali grid_on

Additional file 1 of Inequalities in the impact of COVID-19-associated disruptions on tuberculosis diagnosis by age and sex in 45 high TB burden countries. (2022) McQuaid, C. Finn, Henrion, Marc Y. R., Burke, Rachael M., MacPherson, Peter, Nzawa-Soko, Rebecca, Horton, Katherine C.

epiforecasts/covid19-hospital-activity. (2022) Meakin, Sophie, Abbott, Sam

Code for analysis of mosquito microbiota data. (2022) Messenger, Louisa A., Pelloquin, Bethanie

Additional file 2 of Lack of an association between dietary patterns and adiposity among primary school children in Kilimanjaro Tanzania. (2022) Mosha, Mary Vincent, Paulo, Heavenlight A., Msuya, Sia E., Grosskurth, Heiner, Filteau, Suzanne

Summary characteristics of AGYW by schooling status at baseline and by invitation to DREAMS. (2022) Mulwa, Sarah, Chimoyi, Lucy, Agbla, Schadrac, Osindo, Jane, Wambiya, Elvis O, Gourlay, Annabelle, Birdthistle, Isolde, Ziraba, Abdhalah, Floyd, Sian

Weekly CoMix contact matrices for UKHSA COVID-19 dashboard and ONS COVID-19 infection survey age-groups. (2022) Munday, James D., Jarvis, Christopher I., Gimma, Amy, Wong, Kerry LM, Van Zandvoort, Kevin, Funk, Sebastian, Edmunds, W John

Supporting files for: "Individual, health facility and wider health system factors contributing to maternal deaths in Africa: A scoping review". (2022) Muriithi, Francis G., Banke-Thomas, Aduragbemi, Gakuo, Ruth, Pope, Kia, Coomarasamy, Arri, Gallos, Ioannis D.

Achieving good health with low environmental footprint - A comparison of national indicators dataset. (2022) Mustard, Connor, Haines, Andrew, Belesova, Kristine, Cousens, Simon

kath-o-reilly/wbe_prevalence_england_python. (2022) O'Reilly, Kathleen M.

Supplementary appendix 1b of Oliphant NP, Ray N, Curtis A et al. Optimising scale and deployment of community health workers in Sierra Leone: a geospatial analysis. 2022. (2022) Oliphant, NP, Ray, Nicolas, Curtis, Andrew, Musa, Elizabeth, Sesay, Momodou, Kandeh, Joseph, Kamara, Anitta, Chimoun, Ebeny Francois Temgbait, Jackson, Debra, Doherty, Tanya

Supplementary appendix 1b of Oliphant NP, Ray N, Curtis A et al. Optimizing scale and deployment of CHWs in Sierra Leone: a geospatial analysis. 2021. (2022) Oliphant, NP, Ray, Nicolas, Curtis, Andrew, Musa, Elizabeth, Sesay, Momodou, Kandeh, Joseph, Kamara, Anitta, Chimoun, Ebeny Francois Temgbait, Jackson, Debra, Doherty, Tanya

cmmid/SA2UK: CEA submission. (2022) Pearson, Carl A. B., Russell, Timothy W., Kucharski, Adam J.

rachaelpung/cruise_networks. (2022) Pung, Rachael

GeorgeYQian/Nha-Trang-Contact-Study-Data-and-Code. (2022) Qian, George Y., Clifford, Samuel, Flasche, Stefan, Papastylianou, Tasos

erees/leptoSerology. (2022) Rees, Eleanor

Adherence to additional medication for management of HIV-associated comorbidities among older children and adolescents taking antiretroviral therapy. S1 Data. (2022) Rehman, Andrea M., Simms, Victoria, McHugh, Grace, Mujuru, Hilda, Ngwira, Lucky G., Semphere, Robina, Moyo, Brewster, Bandason, Tsitsi, Odland, Jon O., Ferrand, Rashida A.

alxsrobert/evd-transmission-trees. (2022) Robert, Alexis

Field entomology data from Ethiopian trachoma population survey and laboratory transmission experiments for Musca sorbens and Chlamydia trachomatis. (2022) Robinson, Ailie, Versteeg, Bart, Shafi Abdurahman, Oumer, Clatworthy, Innes, Shuka, Gemeda, Debe, Dereje, Hordofa, Gebreyes, Reis de Oliveira Gomes, Laura, Abraham Aga, Muluadam, Dumessa, Gebeyehu, Sarah, Virginia, Macleod, David, Last, Anna R., Burton, Matthew J., Logan, James G. folder_zip

Additional file 1 of Did you hear about HIV self-testing? HIV self-testing awareness after community-based HIVST distribution in rural Zimbabwe. (2022) Rotsaert, Anke, Sibanda, Euphemia, Hatzold, Karin, Johnson, Cheryl, Corbett, Elizabeth, Neuman, Melissa, Cowan, Frances

Estimating national-level measles case–fatality ratios in low-income and middle-income countries: an updated systematic review and modelling study. (2022) Sbarra, Alyssa N., Mosser, Jonathan F, Jit, Mark, Ferrari, Matthew, Ramshaw, Rebecca E., O'Connor, Patrick, Krause, L Kendall, Rogowski, Emma LB, Portnoy, Allison

Depressive symptoms and HIV risk behaviours among adolescents enrolled in the HPTN071 (PopART) trial in Zambia and South Africa. Aggregate dataset. (2022) Shanaube, Kwame, Gachie, Thomas, Hoddinott, Graeme, Schaap, Albertus, Floyd, Sian, Mainga, Tila, Bond, Virginia, Hayes, Richard, Fidler, Sarah, Ayles, Helen

covid19-forecast-hub-europe/euro-hub-ensemble: Zenodo release. (2022) Sherratt, Katharine, Funk, Sebastian

Data for: Expert review of images from hand-held colposcopy in Zambian women with genital schistosomiasis. (2022) Sturt, Amy, Webb, Emily, Bristowe, Henrietta, Bustinduy, Amaya

Data for: “The presence of hemoglobin in cervicovaginal lavage is not associated with genital schistosomiasis in Zambian women from the BILHIV study”. (2022) Sturt, Amy, Webb, Emily, Bustinduy, Amaya description

tomsumner/Variance_SA_TB. (2022) Sumner, Tom

Hand Hygiene Social Norms among Healthcare Workers During Early COVID-19: Results of a Global Survey. (2022) Szekely, Aron, Gon, Giorgia, Lowe, Hattie, Tosi, Marco

Focus group discussion transcripts. (2022) Tewahido, Dagmawit, Worku, Alemayehu, Tadesse, Amare W., Gulema, Hanna, Berhane, Yemane

deusthindwa/social.contact.rates.estimation.hiv.malawi. (2022) Thindwa, Deus, Jambo, Kondwani C., Ojal, John, MacPherson, Peter, Dennis Phiri, Mphatso, Pinsent, Amy, Khundi, Mcewen, Chiume, Lingstone, Gallagher, Katherine E., Heyderman, Robert S., Corbett, Elizabeth L., French, Neil, Flasche, Stefan

Additional file 2 of Cluster randomised trials with a binary outcome and a small number of clusters: comparison of individual and cluster level analysis method. (2022) Thompson, Jennifer A., Leyrat, Clemence, Fielding, Katherine L., Hayes, Richard J.

Dataset: Cash transfer project. (2022) Timire, Collins, Sandy, Charles, Ferrand, Rashida A., Mubau, Regina, Shiri, Peter, Mbiriyawanda, Obert, Mbiba, Fredrick, Houben, Rein M. G. J., Pedrazzoli, Debora, Bond, Virginia, Foster, Nicola, Kranzer, Katharina

Social contacts and other risk factors for respiratory infections among internally displaced people in Somaliland. Data and analyses. (2022) Van Zandvoort, Kevin, Bobe, Mohamed Omer, Hassan, Abdirahman Ibrahim, Abdi, Mohamed Ismail, Ahmed, Mohammed Saed, Soleman, Saeed Mohamood, Warsame, Mohamed Yusuf, Wais, Muna Awil, Diggle, Emma, Satzke, Catherine, Mulholland, Kim, Egeh, Mohamed Mohamoud, Hassan, Mukhtar Muhumed, Hergeeye, Mohamed Abdi, Eggo, Rosalind M., Checchi, Francesco, Flasche, Stefan, Mcgowan, Catherine R.

NaomiWaterlow/NextGenFlu_Kenya. (2022) Waterlow, Naomi

NaomiWaterlow/NhaTrang_flu_rsv_interaction. (2022) Waterlow, Naomi

Combined HIV Adolescent Prevention Study (CHAPS): qualitative survey data. (2022) Webb, Emily html

weerasuriya/tbconvax-pcb. (2022) Weerasuriya, Chathika Krishan

lshtm-tbmg/tbvax-pub. (2022) Weerasuriya, Chathika, Clark, Rebecca

Data for: "Menstrual health intervention and school attendance in Uganda (MENISCUS-2): A pilot intervention study". (2022) Weiss, Helen description

covid19-forecast-hub-europe/covid19-forecast-hub-europe. (2022) actions-user, Sherratt, Katharine, Gruson, Hugo, Funk, Sebastian, Bracher, Johannes, BIOCOM-SC, Walraven, Robert, miraanto, h-veronika, Rodiah, Isti, gr3gr3, Kraus, David, hgurung-iem, epiforecasts-bot, Xu, Frost Tianjian, Heyder, Stefan, aniruddhadiga, Abbott, Sam, Sun, Tao, Mingio, Marco, Deuschel, Jannik, pmontman, janezz25, neele-itwm, Gibson, Graham, EpiGraph, Tarantino, Barbara, Karlen, Dean, Bhatia, Sangeeta, borjarv

kevinvzandvoort/espicc-somaliland-digaale-survey-2019. (2022) van zandvoort, Kevin, Bobe, Mohamed Omer, Hassan, Abdirahman Ibrahim, Abdi, Mohamed Ismail, Ahmed, Mohammed Saed, Soleman, Saeed Mohamood, Warsame, Mohamed Yusuf, Wais, Muna Awil, Diggle, Emma, McGowan, Catherine R, Satzke, Catherine, Mulholland, Kim, Egeh, Mohamed Mohamoud, Hassan, Mukhtar Muhumed, Hergeeye, Mohamed Abdi, Eggo, Rosalind M, Checchi, Francesco, Flasche, Stefan