Items where Data Creator is Kucharski, Adam"
Number of items: 60.
21 October 2014
  • Potential for large outbreaks of Ebola virus disease: Supplementary Data. (2014) Camacho, Anton, Kucharski, Adam, Funk, Sebastian, Breman, J, Piot, Peter, Edmunds, John
    • 10 February 2015
  • Bed capacity for Ebola patients in Sierra Leone. (2015) Camacho, Anton, Kucharski, Adam J., Aki-Sawyerr, Y, White, M A, Flasche, Stefan, Baguelin, Marc, Pollington, T M, Carney, J, Glover, Rebecca, Smout, E, Tiffany, A, Edmunds, W. John, Funk, Sebastian
    • 6 March 2015
  • Data from: Distinguishing between reservoir exposure and human-to-human transmission for emerging pathogens using case onset data. (2015) Kucharski, Adam, Mills, Harriet, Pinsent, Amy, Fraser, Christophe, Kerkhove, Maria Van, Riley, Steven
    • 10 April 2015
  • Characterizing the Transmission Potential of Zoonotic Infections from Minor Outbreaks: Simulation and Inference code. (2015) Kucharski, Adam, Edmunds, John description
    • 1 June 2015
  • School's Out: Seasonal Variation in the Movement Patterns of School Children. S1 Dataset. Reported individual travel patterns. (2015) Kucharski, Adam, Conlan, Andrew J. K., Eames, Ken grid_on
    • 3 November 2015
  • Ebola virus disease in the Democratic Republic of the Congo, 1976-2014: Figures and Data. (2015) Rosello, Alicia, Mossoko, Mathias, Flasche, Stefan, Vanhoek, Albert, Mbala, Placide, Camacho, Anton, Funk, Sebastian, Kucharski, Adam, Ilunga, Benoit Kebela, Edmunds, John, Piot, Peter, Baguelin, Marc, Tamfum, Jean-Jacques Muyembe description
    • 17 May 2016
  • S1 Dataset for "Transmission Dynamics of Zika Virus in Island Populations: A Modelling Analysis of the 2013–14 French Polynesia Outbreak". (2016) Kucharski, Adam J., Funk, Sebastian, Eggo, Rosalind M., Mallet, Henri-Pierre, Edmunds, W. John, Nilles, Eric J. description
    • 16 November 2017
  • Ebola Dataset for "Learning Clinical Epidemiology with R" tutorial. (2017) Marks, Michael, Camacho, Anton, Kucharski, Adam, Funk, Sebastian, Edmunds, John, Piot, Peter description
    • 12 December 2017
  • Social mixing in Fiji: Who-eats-with-whom contact patterns and the implications of age and ethnic heterogeneity for disease dynamics in the Pacific Islands. (2017) Watson, Conall H., Coriakula, Jeremaia, Ngoc, Dung Tran Thi, Flasche, Stefan, Kucharski, Adam J., Lau, Colleen L., Thieu, Nga Tran Vu, le Polain de Waroux, Olivier, Rawalai, Kitione, Van, Tan Trinh, Taufa, Mere, Baker, Stephen, Nilles, Eric J., Kama, Mike, Edmunds, W. John
    • 25 July 2018
  • Reported contacts dataset for "Structure and consistency of self-reported social contact networks in British secondary schools". (2018) Kucharski, Adam J., Wenham, Clare, Brownlee, Polly, Racon, Lucie, Widmer, Natasha, Eames, Ken T. D., Conlan, Andrew J. K.
    • 26 July 2018
  • Data for: Identifying human encounters that shape the transmission of Streptococcus pneumoniae and other acute respiratory infections. (2018) le Polain de Waroux, Olivier, Flasche, Stefan, Kucharski, Adam J, Langendorf, Celine, Ndazima, Donny, Mwanga-Amumpaire, Juliet, Grais, Rebecca F, Cohuet, Sandra, Edmunds, W John
    • 14 August 2018
  • adamkucharski/fiji-denv3-2014. (2018) Kucharski, Adam J, Kama, Mike, Watson, Conall H, Aubry, Maite, Funk, Sebastian, Henderson, Alasdair D, Brady, Oliver J, Vanhomwegen, Jessica, Manuguerra, Jean-Claude, Lau, Colleen L, Edmunds, W John, Aaskov, John, Nilles, Eric James, Cao-Lormeau, Van-Mai, Hue, Stephane, Hibberd, Martin L
    • 29 November 2018
  • scrapR. (2018) Kucharski, Adam
    • 12 March 2019
  • Additional file 2: of Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh. (2019) Finger, Flavio, Funk, Sebastian, White, Kate, Siddiqui, M. Ruby, Edmunds, W. John, Kucharski, Adam J.
  • Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh. (2019) Finger, Flavio, Funk, Sebastian, White, Kate, Siddiqui, M. Ruby, Edmunds, W. John, Kucharski, Adam J.
    • 31 January 2020
  • Probability of a large 2019-nCoV outbreak following introduction of cases. (2020) Kucharski, Adam J., Russell, Timothy W., Diamond, Charlie, CMMID nCoV working group, Funk, Sebastian, Eggo, Rosalind M.
    • 19 February 2020
  • Contacts in context: large-scale setting-specific social mixing matrices from the BBC Pandemic project. (2020) Klepac, Petra, Kucharski, Adam J, Conlan, Andrew JK, Kissler, Stephen, Tang, Maria, Fry, Hannah, Gog, Julia R
    • 28 February 2020
  • Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts. (2020) Hellewell, Joel, Abbott, Sam, Gimma, Amy, Bosse, Nikos, Jarvis, Christopher, Russell, Timothy, Munday, James, Kucharski, Adam, Edmunds, W John, Funk, Sebastian, Eggo, Rosalind, Sun, Fiona, Flasche, Stefan, Quilty, Billy, Davies, Nicholas, Liu, Yang, Clifford, Samuel, Klepac, Petra, Jit, Mark, Diamond, Charlie, Gibbs, Hamish, Van Zandvoort, Kevin
    • 3 March 2020
  • Inferring COVID-19 cases from deaths of confirmed cases. (2020) Jombart, Thibaut, Abbott, Sam, Gimma, Amy, Zandvoort, Kevin, Clifford, Samuel, Jarvis, Christopher, Russell, Timothy, Funk, Sebastian, Gibbs, Hamish, Eggo, Rosalind M., Kucharski, Adam J., CMMID COVID-19 Working Group, Edmunds, W. John
    • 18 March 2020
  • Age-structured SEIR model for COVID-19 outbreak in Wuhan, China. (2020) Prem, Kiesha, Liu, Yang, Russell, Timothy W, Kucharski, Adam J, Eggo, Rosalind M, Davies, Nicholas G, Jit, Mark, Klepac, Petra, Flasche, Stefan, Clifford, Samuel, Pearson, Carl A B, Munday, James D, Abbott, Sam, Gibbs, Hamish, Rosello, Alicia, Quilty, Billy J, Jombart, Thibaut, Sun, Fiona, Diamond, Charlie, Gimma, Amy, Van zandvoort, Kevin, Funk, Sebastian, Jarvis, Christopher I, Edmunds, W John, Bosse, Nikos I, Hellewell, Joel
    • 22 March 2020
  • thimotei/CFR_calculation. (2020) Russell, Timothy W., Hellewell, Joel, Abbott, Sam, Jarvis, Christopher, Zandvoort, Kevin van, Ratnayake, Ruwan, CMMID nCov working group, Flasche, Stefan, Eggo, Rosalind M., Edmunds, W. John, Kucharski, Adam J.
    • 26 March 2020
  • Estimating the infection and case fatality ratio for COVID-19 using age-adjusted data from the outbreak on the Diamond Princess cruise ship. (2020) Russell, Timothy W., Hellewell, Joel, Jarvis, Christopher I., Van-Zandvoort, Kevin, Abbott, Sam, Ratnayake, Ruwan, Flasche, Stefan, Eggo, Rosalind M, Kucharski, Adam J.
    • 2 April 2020
  • cmmid/covid-uk. (2020) Davies, Nicholas G, Kucharski, Adam J., Eggo, Rosalind M, Gimma, Amy, COVID-19 Working Group, Edmunds, W. John
    • 5 April 2020
  • Extended data: Estimating the overdispersion in COVID-19 transmission using outbreak sizes outside China. (2020) Endo, Akira, Abbott, Sam, Kucharski, Adam J., Funk, Sebastian
    • 6 April 2020
  • akira-endo/COVID19_clustersize: Estimating the amount of superspreading using outbreak sizes of COVID-19 outside China. (2020) Endo, Akira, Abbott, Sam, Kucharski, Adam J., Funk, Sebastian
    • 20 May 2020
  • UK Colocation Dashboard. (2020) Gibbs, Hamish, CMMID nCov Working Group, Eggo, Rosalind M., Grundy, Chris, Kucharski, Adam J.
    • 7 July 2020
  • thimotei/covid_travel_restrictions. (2020) Russell, Timothy W., Wu, Joseph T, Clifford, Samuel, CMMID COVID-19 working group, Edmunds, W John, Kucharski, Adam J., Jit, Mark
    • 8 July 2020
  • Reconstructing the global dynamics of unreported COVID-19 cases and infections. (2020) Russell, Timothy W., Golding, Nick, Hellewell, Joel, Abbott, Sam, Pearson, Carl A B, Van zandvoort, Kevin, Jarvis, Christopher I, Gibbs, Hamish, Liu, Yang, Eggo, Rosalind M., Edmunds, W. John, Kucharski, Adam J., CMMID COVID-19 working group
    • 1 October 2020
  • akira-endo/COVID19_backwardtracing. (2020) Endo, Akira, Kucharski, Adam J.
    • 17 November 2020
  • cmmid/pcr-profile. (2020) Hellewell, Joel, Russell, Timothy W., The SAFER Investigators and Field Study Team, The Crick COVID-19 Consortium, CMMID COVID-19 working group, Beale, Rupert, Kelly, Gavin, Houlihan, Catherine, Nastouli, Eleni, Kucharski, Adam J.
    • 11 December 2020
  • o2geosocial. (2020) Robert, Alexis, Funk, Sebastian, Kucharski, Adam J.
    • 14 January 2021
  • cmmid/SA2UK. (2021) Pearson, Carl A. B., Russell, Timothy W., Kucharski, Adam J.
    • 18 February 2021
  • Analysis data and code for "Estimated transmissibility and impact of SARS-CoV-2 Variant of Concern 202012/01 in England". (2021) Davies, Nicholas G., Abbott, Sam, Barnard, Rosanna C., Jarvis, Christopher I., Kucharski, Adam J., Munday, James, Pearson, Carl A. B., Russell, Timothy W., Tully, Damien C., Washburne, Alex D., Wenseleers, Tom, Gimma, Amy, Waites, William, Wong, Kerry LM, van Zandvoort, Kevin, Silverman, Justin D., Diaz-Ordaz, Karla, Keogh, Ruth, Eggo, Rosalind M., Funk, Sebastian, Jit, Mark, Atkins, Katherine E., Edmunds, W. John
    • 25 February 2021
  • Analysis data and code for "Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England". (2021) Davies, Nicholas G., Abbott, Sam, Barnard, Rosanna C., Jarvis, Christopher I., Kucharski, Adam J., Munday, James, Pearson, Carl A. B., Russell, Timothy W., Tully, Damien C., Washburne, Alex D., Wenseleers, Tom, Gimma, Amy, Waites, William, Wong, Kerry LM, van Zandvoort, Kevin, Silverman, Justin D., Diaz-Ordaz, Karla, Keogh, Ruth, Eggo, Rosalind M., Funk, Sebastian, Jit, Mark, Atkins, Katherine E., Edmunds, W. John
    • 24 May 2021
  • adamkucharski/covid-import-model. (2021) Kucharski, Adam J.
    • 22 June 2021
  • Population disruption: estimating changes in population distribution in the UK during the COVID-19 pandemic - Estimates for Local Authority Districts. (2021) Gibbs, Hamish, Waterlow, Naomi R., Cheshire, James, Danon, Leon, Liu, Yang, Grundy, Chris, Kucharski, Adam J., Eggo, Rosalind M.
    • 11 September 2021
  • o2geosocial: Reconstruction of Transmission Chains from Surveillance Data. (2021) Robert, Alexis, Funk, Sebastian, Kucharski, Adam J., Jombart, Thibaut
    • 27 October 2021
  • akira-endo/schooldynamics_FluMatsumoto14-15: Within and between classroom transmission patterns of seasonal influenza among primary school students in Matsumoto city, Japan. (2021) Endo, Akira, Uchida, Mitsuo, Hayashi, Naoki, Liu, Yang, Atkins, Katherine E., Kucharski, Adam J., Funk, Sebastian
    • 10 December 2021
  • Unexposed populations and potential COVID-19 burden in European countries as of 21st November 2021. (2021) Chapman, Lloyd A C, Barnard, Rosanna C, Russell, Timothy W, Abbott, Sam, Van Zandvoort, Kevin, Davies, Nicholas G, Kucharski, Adam J
    • 16 March 2022
  • EmilieFinch/covid-reinfection. (2022) Finch, Emilie, Kucharski, Adam J.
    • 1 June 2022
  • The importance of fine-scale predictors of wild boar habitat use in an isolated population. (2022) Bacigalupo, Sonny, Ruby Chang, Yu-Mei, Dixon, Linda, Gubbins, Simon, Kucharski, Adam J., Drewe, Julian
    • 6 August 2022
  • hamishgibbs/facebook_population_2020_2021. (2022) Gibbs, Hamish, Waterlow, Naomi R., Cheshire, James, Danon, Leon, Liu, Yang, Grundy, Chris, Kucharski, Adam J., Eggo, Rosalind M.
    • 10 August 2022
  • cmmid/SA2UK: CEA submission. (2022) Pearson, Carl A. B., Russell, Timothy W., Kucharski, Adam J.
    • 23 August 2022
  • akira-endo/schooldynamics_FluMatsumoto14-15: Simulating respiratory disease transmission within and between classrooms to assess pandemic management strategies at schools. (2022) Endo, Akira, Uchida, Mitsuo, Liu, Yang, Atkins, Katherine E., Kucharski, Adam J., Funk, Sebastian
    • 15 January 2023
  • Relative role of border restrictions, case finding and contact tracing in controlling SARS-CoV-2 in the presence of undetected transmission: a mathematical modelling study. (2023) Pung, Rachael, Clapham, Hannah E, Russell, Timothy W., Lee, Vernon J., Kucharski, Adam J.
    • 31 March 2023
  • epiverse-trace. (2023) Pavlich-Mariscal, Jaime, Eggo, Rosalind M., Kucharski, Adam J., Gruson, Hugo, Russell, Timothy W., Valle Campos, Andree, Cucunubá, Zulma M., Santos-Vega, Mauricio, Gupte, Pratik, Azam, James, Torres Domínguez, Nicolás, Lambert, Joshua, Gomez, Geraldine, Umaña, Juan D., Quevedo-Vega, David Santiago, Gámez López, Miguel Enrique, Carnegie, Anna
    • 1 April 2023
  • Impact of vaccinations, boosters and lockdowns on COVID-19 waves in French Polynesia. (2023) Chapman, Lloyd A.C., Aubry, Maite, Maset, Noemie, Russell, Timothy, Knock, Edward S, Lees, John A, Mallet, Henri-Pierre, Cao-Lormeau, Van-Mai, Kucharski, Adam J.
    • 26 April 2023
  • Data and R-code to accompany 'Towards an Early Warning System for Leptospirosis in North-Eastern Argentina'. (2023) Lotto Batista, Martín, Rees, Eleanor M., Gómez, Andrea, López, Soledad, Castell, Stefanie, Kucharski, Adam J., Ghozzi, Stéphane, Müller, Gabriela V, Lowe, Rachel
    • 29 September 2023
  • epiverse-trace/epiparameter. (2023) Lambert, Joshua, Gruson, Hugo, Kucharski, Adam J., Gupte, Pratik, Salmon, Maëlle, Campos, Andree Valle, Monticone, Pietro
    • 29 November 2023
  • thimotei/legacy_ct_modelling: Final version. (2023) Abbott, Sam, Russell, Timothy W., Hellewell, Joel, Kucharski, Adam J.
    • 9 January 2024
  • epiverse-trace/simulist. (2024) Lambert, Joshua, Gruson, Hugo, Kucharski, Adam J., Tamayo Cuartero, Carmen
    • 1 February 2024
  • enilles1/immunoepidemiology. (2024) Nilles, Eric J., Kucharski, Adam J.
    • 9 April 2024
  • finalsize: Calculate the Final Size of an Epidemic. (2024) Gupte, Pratik, Van Leeuwen, Edwin, Kucharski, Adam, Eggo, Rosalind M., Gruson, Hugo, Jombart, Thibaut, Valle Campos, Andree, Lambert, Joshua W.
    • 12 June 2024
  • cfr: Estimate Disease Severity and Case Ascertainment. (2024) Gupte, Pratik R., Kucharski, Adam J., Russell, Timothy W., Lambert, Joshua W., Gruson, Hugo, Taylor, Tim, Azam, James M., Degoot, Abdoelnaser M., Funk, Sebastian
    • 18 July 2024
  • thimotei/legacy_nAb_kinetics. (2024) Russell, Timothy W., Kucharski, Adam J.
    • 4 November 2024
  • rachaelpung/temporal_networks. (2024) Pung, Rachael, Kucharski, Adam J., Firth, Josh, Russell, Timothy W., Rogers, Tim, Lee, Vernon
    • 28 November 2024
  • epiparameterDB: Database of Epidemiological Parameters. (2024) Lambert, Joshua W., Kucharski, Adam J., Tamayo, Carmen
    • 25 March 2025
  • simulist: Simulate Disease Outbreak Line List and Contacts Data. (2025) Lambert, Joshua W., Tamayo, Carmen, Gruson, Hugo, Gupte, Pratik R., Kucharski, Adam J., Hartgerink, Chris, Funk, Sebastian
    • 11 June 2025
  • Geospatial analysis of leptospirosis clusters and risk factors in two provinces of the Dominican Republic. (2025) Martin, Beatris Mario, Sartorius, Benn, Mayfield, Helen J., Cadavid Restrepo, Angela M., Kiani, Behzad, Then Paulino, Cecilia J., Etienne, Marie Caroline, Skewes-Ramm, Ronald, de St. Aubin, Michael, Dumas, Devan, Garnier, Salomé, Duke, William, Peña, Farah, Abdalla, Gabriela, de la Cruz, Lucia, Henríquez, Bernarda, Baldwin, Margaret, Kucharski, Adam J., Nilles, Eric J., Lau, Colleen L.
    • 15 July 2025
  • superspreading: Understand Individual-Level Variation in Infectious Disease Transmission. (2025) Lambert, Joshua W., Kucharski, Adam J., Adam, Dillon C., Funk, Sebastian, Gupte, Pratik, Gruson, Hugo, Azam, James M., Hartgerink, Chris