Items where faculty/department is "Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology" and Year is 2018

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Number of items: 50.

A

Abbas, KM, Kang, GJ, Chen, D, Werre, SR and Marathe, A (2018). Repository for manuscript: "Demographics, perceptions, and socio-economic factors affecting influenza vaccination among adults in the United States". [Data Collection]. Github. https://github.com/gloriakang/influenza-vaccination-adults

B

Bandason, T, Dauya, E, Dakshina, S, McHugh, G, Chonzi, P, Munyati, S, Weiss, HA, Simms, V, Kranzer, K and Ferrand, RA (2018). Screening tool to identify adolescents living with HIV in a community setting in Zimbabwe: A validation study. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0204891.s001.

C

Choko, A, Corbett, E and Fielding, K (2018). Baseline and primary data for the partner-provided HIV self-testing and linkage (PASTAL) adaptive multi-arm multi-stage cluster randomized trial in Blantyre, Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000923.

Cresswell, J, Filippi, V, Ganaba, R, Diallo, HA, Sarrassat, S and Somé, H (2018). Alive & Thrive Evaluation in Burkina Faso: endline data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.280.

D

Day, LT, Ruysen, H, Gordeev, VS, Gore-langton, GR, Boggs, D, Cousens, S, Moxon, SG, Blencowe, H, Baschieri, A, Rahman, AE, Tahsina, T, Zaman, SB, Hossain, T, Rahman, QS, Ameen, S, Arifeen, SE, KC, A, Shrestha, SK, KC, NP, Singh, D, Jha, AK, Jha, B, Rana, N, Basnet, O, Joshi, E, Paudel, A, Shrestha, PR, Jha, D, Bastola, RC, Ghimire, JJ, Paudel, R, Salim, N, Shamba, D, Manji, K, Shabani, J, Shirima, K, Mkopi, N, Mrisho, M, Manzi, F, Jaribu, J, Kija, E, Assenga, E, Kisenge, R, Pembe, A, Hanson, C, Mbaruku, G, Masanja, H and Lawn, JE (2018). EN-BIRTH Data Collection Tools. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000951.

Day, LT, Ruysen, H, Gordeev, VS, Gore-langton, GR, Boggs, D, Cousens, S, Moxon, SG, Blencowe, H, Baschieri, A, Rahman, AE, Tahsina, T, Zaman, SB, Hossain, T, Rahman, QS, Ameen, S, Arifeen, SE, KC, A, Shrestha, SK, KC, NP, Singh, D, Jha, AK, Jha, B, Rana, N, Basnet, O, Joshi, E, Paudel, A, Shrestha, PR, Jha, D, Bastola, RC, Ghimire, JJ, Paudel, R, Salim, N, Shamba, D, Manji, K, Shabani, J, Shirima, K, Mkopi, N, Mrisho, M, Manzi, F, Jaribu, J, Kija, E, Assenga, E, Kisenge, R, Pembe, A, Hanson, C, Mbaruku, G, Masanja, H and Lawn, JE (2018). EN-BIRTH Data Collector Training - Handbook and Manual. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000952.

Day, LT, Ruysen, H, Gordeev, VS, Gore-langton, GR, Boggs, D, Cousens, S, Moxon, SG, Blencowe, H, Baschieri, A, Rahman, AE, Tahsina, T, Zaman, SB, Hossain, T, Rahman, QS, Ameen, S, Arifeen, SE, KC, A, Shrestha, SK, KC, NP, Singh, D, Jha, AK, Jha, B, Rana, N, Basnet, O, Joshi, E, Paudel, A, Shrestha, PR, Jha, D, Bastola, RC, Ghimire, JJ, Paudel, R, Salim, N, Shamba, D, Manji, K, Shabani, J, Shirima, K, Mkopi, N, Mrisho, M, Manzi, F, Jaribu, J, Kija, E, Assenga, E, Kisenge, R, Pembe, A, Hanson, C, Mbaruku, G, Masanja, H and Lawn, JE (2018). EN-BIRTH Data Collector Training – Training Module material. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000954.

Day, LT, Ruysen, H, Gordeev, VS, Gore-langton, GR, Boggs, D, Cousens, S, Moxon, S, Blencowe, H, Baschieri, A, Rahman, AE, Tahsina, T, Zaman, SB, Hossain, T, Rahman, QS, Ameen, S, Arifeen, SE, KC, A, Shrestha, SK, KC, NP, Singh, D, Jha, AK, Jha, B, Rana, N, Basnet, O, Joshi, E, Paudel, A, Shrestha, PR, Jha, D, Bastola, RC, Ghimire, JJ, Paudel, R, Salim, N, Shamba, D, Manji, K, Shabani, J, Shirima, K, Mkopi, N, Mrisho, M, Manzi, F, Jaribu, J, Kija, E, Assenga, E, Kisenge, R, Pembe, A, Hanson, C, Mbaruku, G, Masanja, H and Lawn, JE (2018). EN-BIRTH Data Collector Training - Supporting Annexes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000953.

Doyle, AM, Floyd, S, Baisley, K, Orindi, B, Kwaro, D, Mthiyane, TN, Muuo, S, Shahmanesh, M, Ziraba, A and Birdthistle, I (2018). Who are the male sexual partners of adolescent girls and young women? Comparative analysis of population data in three settings prior to DREAMS roll-out. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0198783

de Lencastre, H, Manna, S, Dunne, EM, Ortika, BD, Pell, CL, Kama, M, Russell, FM, Mungun, T, Mulholland, KE, Hinds, J and Satzke, C (2018). Discovery of a Streptococcus pneumoniae serotype 33F capsular polysaccharide locus that lacks wcjE and contains a wcyO pseudogene. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0206622

E

Eggo, RM (2018). Computer code of the coinfection model. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1006770.s004.

F

Falconer, J and Parajuli, A (2018). Draft search strategies for: "Novel strategies and approaches for testing populations at risk for sexually transmitted infections: A systematic review protocol". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001047.

Floyd, S, Ayles, H, Schaap, A, Shanaube, K, MacLeod, D, Phiri, M, Griffith, S, Bock, P, Beyers, N, Fidler, S and Hayes, R (2018). Aggregate data for "Towards 90-90: Findings after two years of the HPTN 071 (PopART) cluster-randomized trial of a universal testing-and-treatment intervention in Zambia". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0197904.s005

Foster, N, Hanifa, Y, Pillai, N, Roycent, T, Fielding, K, Vassall, A and Grant, AD (2018). XPHACTOR cross-sectional patient cost dataset. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000791.

Funk, S (2018). Socialmixr: Social Mixing Matrices for Infectious Disease Modelling. [Data Collection]. The Comprehensive R Archive Network. https://CRAN.R-project.org/package=socialmixr

G

Gon, G (2018). Data for "HANDS project - Hand-hygiene of Attendants for Newborn Deliveries and Survival". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000778.

H

Harvey, S, Lees, S, Mshana, G, Pilger, D, Hansen, C, Kapiga, S and Watts, C (2018). Additional files for: "A cluster randomized controlled trial to assess the impact on intimate partner violence of a 10-session participatory gender training curriculum delivered to women taking part in a group-based microfinance loan scheme in Tanzania (MAISHA CRT01): study protocol". [Data Collection]. London School of Hygiene & Tropical Medicine, London. http://datacompass.lshtm.ac.uk/679/

Higgins, M, Ravenhall, M, Ward, D, Phelan, J, Ibrahim, A, Forrest, MS, Clark, TG, Campino, S and Hancock, J (2018). PrimedRPA: Primer design for Recombinase polymerase amplification assays. [Data Collection]. BioInformatics. https://doi.org/10.1093/bioinformatics/bty701

Horby, P, Thai, PQ, Hens, N, Yen, NTT, Mai, LQ, Thoang, DD, Linh, NM, Huong, NT, Alexander, N, Edmunds, WJ, Duong, TN, Fox, A and Hien, NT (2018). Social Contact Data for Vietnam. [Data Collection]. Zenodo digital repository. https://doi.org/10.5281/zenodo.1289473

Horton, KC, Sumner, T, Houben, Rein M G J, Corbett, EL and White, RG (2018). A Bayesian approach to understanding gender differences in tuberculosis disease burden. [Data Collection]. American Journal of Epidemiology. https://doi.org/10.1093/aje/kwy131

J

Jeandron, A, Cumming, O, Rumedeka, BB, Saidi, JM and Cousens, S (2018). Dataset for "Confirmation of cholera by rapid diagnostic test amongst patients admitted to the cholera treatment centre in Uvira, Democratic Republic of the Congo". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0201306.s002

Jombart, T, Campbell, F and Fitzjohn, R (2018). outbreaker2: Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. [Data Collection]. The Comprehensive R Archive Network. https://CRAN.R-project.org/package=outbreaker2

Jombart, T, Kendall, M, Almagro-Garcia, J and Colijn, C (2018). treespace: exploration of landscapes of phylogenetic trees. [Data Collection]. Github. https://thibautjombart.github.io/treespace/

K

Kelly, C, Dube, A and Mortimer, K (2018). Data for: "From kitchen to classroom: Assessing the impact of cleaner burning biomass-fuelled cookstoves on primary school attendance in Karonga district, northern Malawi". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.282.

Knight, G (2018). Code for "The relative fitness of drug resistant Mycobacterium tuberculosis: a modelling study of household transmission in Lima, Peru". [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.1205418

Knight, GM, Zimic, M, Funk, S, Gilman, RH, Friedland, JS and Grandjean, L (2018). Follow up time from The relative fitness of drug-resistant Mycobacterium tuberculosis: a modelling study of household transmission in Peru. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.6480617.v1

Kucharski, AJ, Wenham, C, Brownlee, P, Racon, L, Widmer, N, Eames, KTD and Conlan, AJK (2018). Reported contacts dataset for "Structure and consistency of self-reported social contact networks in British secondary schools". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.1371/journal.pone.0200090.s002

Kucharski, AJ, Kama, M, Watson, CH, Aubry, M, Funk, S, Henderson, AD, Brady, OJ, Vanhomwegen, J, Manuguerra, J, Lau, CL, Edmunds, WJ, Aaskov, J, Nilles, EJ, Cao-Lormeau, V, Hué, S and Hibberd, ML (2018). Serological, surveillance and climate data for the 2013/14 DENV-3 outbreak in Central Division. [Data Collection]. eLife. https://doi.org/10.7554/eLife.34848.027

L

Lalli, M, Ruysen, H, Blencowe, H, Yee, K, Clune, K, DeSilva, M, Leffler, M, Hillman, E, El-Noush, H, Mulligan, J, Murray, JC, Silver, K and Lawn, JE (2018). Saving Lives at Birth; development of a retrospective theory of change, impact framework and prioritised metrics. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3990024.v1

Leung, K, Jit, M, Lau, EHY and Wu, JT (2018). Social contact data for Hong Kong. [Data Collection]. Zenodo. http://doi.org/10.5281/zenodo.1165562

le Polain de Waroux, O, Flasche, S, Kucharski, AJ, Langendorf, C, Ndazima, D, Mwanga-Amumpaire, J, Grais, RF, Cohuet, S and Edmunds, WJ (2018). Data for: Identifying human encounters that shape the transmission of Streptococcus pneumoniae and other acute respiratory infections. [Data Collection]. Mendeley Data. https://doi.org/10.17632/rdskdgxrh3.1

M

Marks, M, Mitjà, O, Bottomley, C, Kwakye, C, Houinei, W, Bauri, M, Adwere, P, Abdulai, AA, Dua, F, Boateng, L, Wangi, J, Ohene, S, Wangnapi, R, Simpson, SV, Miag, H, Addo, KK, Basing, LA, Danavall, D, Chi, KH, Pillay, A, Ballard, R, Solomon, AW, Chen, CY, Bieb, SV, Adu-Sarkodie, Y, Mabey, DCW and Asiedu, K (2018). Supplement to: "Comparative efficacy of low-dose versus standard-dose azithromycin for patients with yaws: a randomised non-inferiority trial in Ghana and Papua New Guinea". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000766.

Massad, E, dos Santos, PCC, da Rocha, AF and Stupple, EJN (2018). The Monty Hall problem revisited: Autonomic arousal in an inverted version of the game. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0192542

McCarthy, K, Fielding, K, Churchyard, GJ and Grant, AD (2018). Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0191608.s001

Moxon, S (2018). Measurement of inpatient care for small and sick newborns. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000902.

P

Palittapongarnpim, P, Ajawatanawong, P, Viratyosin, W, Smittipat, N, Disratthakit, A, Mahasirimongkol, S, Yanai, H, Yamada, N, Nedsuwan, S, Imasanguan, W, Kantipong, P, Chaiyasirinroje, B, Wongyai, J, Toyo-oka, L, Phelan, J, Parkhill, J, Clark, TG, Hibberd, ML, Ruengchai, W, Palittapongarnpim, P, Juthayothin, T, Tongsima, S and Tokunaga, K (2018). Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates. [Data Collection]. Scientific Reports. https://doi.org/10.1038/s41598-018-29986-3

S

Schallig, Henk D. F. H., Rassi, C, Gore-langton, GR, Gidudu Walimbwa, B, Strachan, CE, King, R, Basharat, S, Christiansen-Jucht, C, Graham, K and Gudoi, SS (2018). Improving health worker performance through text messaging: A mixed-methods evaluation of a pilot intervention designed to increase coverage of intermittent preventive treatment of malaria in pregnancy in West Nile, Uganda. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0203554

Sepúlveda, N, Phelan, J, Diez-Benavente, E, Campino, S, Clark, TG, Hopkins, H, Sutherland, C, Drakeley, CJ and Beshir, KB (2018). Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. [Data Collection]. Infection, Genetics and Evolution. https://doi.org/10.1016/j.meegid.2018.04.039

Sobkowiak, B, Glynn, JR, Houben, Rein M. G. J., Mallard, K, Phelan, JE, Guerra-Assunção, JA, Banda, L, Mzembe, T, Viveiros, M, McNerney, R, Parkhill, J, Crampin, AC and Clark, TG (2018). Additional file 1: of Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.6968636.v1

Southern, J, Andrews, N, Sandu, P, Sheppard, CL, Waight, PA, Fry, NK, Vanhoek, AJ and Miller, E (2018). Pneumococcal carriage in children and their household contacts six years after introduction of the 13-valent pneumococcal conjugate vaccine in England. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0195799.s001

Stone, WJR, Campo, JJ, Ouédraogo, AL, Meerstein-Kessel, L, Morlais, I, Da, D, Cohuet, A, Nsango, S, Sutherland, CJ, van de Vegte-Bolmer, M, Siebelink-Stoter, R, van Gemert, G, Graumans, W, Lanke, K, Shandling, AD, Pablo, JV, Teng, AA, Jones, S, de Jong, RM, Fabra-García, A, Bradley, J, Roeffen, W, Lasonder, E, Gremo, G, Schwarzer, E, Janse, CJ, Singh, SK, Theisen, M, Felgner, P, Marti, M, Drakeley, C, Sauerwein, R, Bousema, T and Jore, MM (2018). Data from: Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. [Data Collection]. Dryad Digital Repository. https://doi.org/10.5061/dryad.8bp05

Sumner, T (2018). Mathematical model projections for: "Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000950.

Sunny, B, Glynn, JR and Crampin, AC (2018). Data for the paper on “Does early growth failure influence later school performance? A cohort study in Karonga district, northern Malawi”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000675.

Sunny, B, Glynn, JR, Crampin, AC and Kanjala, C (2018). Data for the paper on "Early school failure predicts teenage pregnancy and marriage: a large population-based cohort study in Northern Malawi". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.285.

T

Tam, CC, O’Driscoll, M, Taurel, A, Nealon, J and Hadinegoro, SR (2018). Geographic variation in dengue seroprevalence and force of infection in the urban paediatric population of Indonesia. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0006932

V

Vanobberghen, F, Weiss, H, D’Souza, E, Patel, V, Rahman, A, Fuhr, D, Weobung, B and Lazarus, A (2018). Data for Thinking Healthy Programme India trial (THPP-India). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000793.

Vanobberghen, F, Weiss, H, Zaidi, A, Patel, V, Rahman, A, Sikander, S, Fuhr, D and Ahmad, I (2018). Data for Thinking Healthy Programme Pakistan trial (THPP-Pakistan). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000794.

W

Weiss, H, Nakinyingi-Miiro, J and Sembajjwe, W (2018). Data for: "Menstrual health and school absenteeism among adolescent girls in Uganda (MENISCUS): feasibility study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.275.

Z

Ziraba, A, Orindi, B, Muuo, S, Floyd, S, Birdthistle, IJ, Mumah, J, Osindo, J, Njoroge, P and Kabiru, CW (2018). S7 Table in "Understanding HIV risks among adolescent girls and young women in informal settlements of Nairobi, Kenya: Lessons for DREAMS". [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0197479.s007

Zirba, A, Orindi, B, Muuo, S, Floyd, S, Birdthistle, IJ, Mumah, J, Osindo, J, Njoroge, P and Kabiru, CW (2018). Understanding HIV risks among adolescent girls and young women in informal settlements of Nairobi, Kenya: Lessons for DREAMS. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0197479

This list was generated on Wed Jul 17 02:03:46 2019 BST.