Items where Data Creator is Phelan, Jody"
Number of items: 20.
4 November 2015
Whole genome sequences for M.tuberculosis isolates from the TDR strain bank. (2015)
Phelan, Jody, Coll, Francesc, Mcnerney, Ruth, Ascher, David B., Pires, Douglas E. V., Furnham, Nick, Coeck, Nele, Hill-Cawthorne, Grant A., Nair, Mridul B., Mallard, Kim, Ramsay, Andrew, Campino, Susana, Hibberd, Martin, Pain, Arnab, Rigouts, Leen, Clark, Taane
description
8 February 2017
Primary macrophages and J774 cells respond differently to infection with Mycobacterium tuberculosis. (2017)
Andreu, Nuria, Phelan, Jody, de Sessions, Paola F, Cliff, Jackie M., Clark, Taane, Hibberd, Martin
2 May 2018
Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. (2018)
Sepúlveda, Nuno, Phelan, Jody, Diez-Benavente, Ernest, Campino, Susana, Clark, Taane G., Hopkins, Heidi, Sutherland, Colin, Drakeley, Chris J., Beshir, Khalid B.
14 June 2018
Identification and validation of a novel panel of Plasmodium knowlesi biomarkers of serological exposure. (2018)
Herman, Lou S., Fornace, Kimberly, Phelan, Jody, Grigg, Matthew J., Anstey, Nicholas M., William, Timothy, Moon, Robert W., Blackman, Michael J., Drakeley, Chris J., Tetteh, Kevin K. A.
2 August 2018
Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates. (2018)
Palittapongarnpim, Prasit, Ajawatanawong, Pravech, Viratyosin, Wasna, Smittipat, Nat, Disratthakit, Areeya, Mahasirimongkol, Surakameth, Yanai, Hideki, Yamada, Norio, Nedsuwan, Supalert, Imasanguan, Worarat, Kantipong, Pacharee, Chaiyasirinroje, Boonchai, Wongyai, Jiraporn, Toyo-oka, Licht, Phelan, Jody, Parkhill, Julian, Clark, Taane G., Hibberd, Martin L., Ruengchai, Wuthiwat, Palittapongarnpim, Panawun, Juthayothin, Tada, Tongsima, Sissades, Tokunaga, Katsushi
14 August 2018
Additional file 1: of Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. (2018)
Sobkowiak, Benjamin, Glynn, Judith R., Houben, Rein M. G. J., Mallard, Kim, Phelan, Jody E., Guerra-Assunção, José Afonso, Banda, Louis, Mzembe, Themba, Viveiros, Miguel, McNerney, Ruth, Parkhill, Julian, Crampin, Amelia C., Clark, Taane G.
24 June 2019
Additional file 1: of Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs. (2019)
Phelan, Jody, O’Sullivan, Denise M, Machado, Diana, Ramos, Jorge, Oppong, Yaa EA, Campino, Susana, O’Grady, Justin, McNerney, Ruth, Hibberd, Martin L, Viveiros, Miguel, Huggett, Jim F, Clark, Taane G.
15 December 2020
Genomic evidence supporting the clonal expansion of extensively drug-resistant tuberculosis bacteria belonging to a rare proto-Beijing genotype. (2020)
Srilohasin, Prapaporn, Prammananan, Therdsak, Faksri, Kiatichai, Phelan, Jody E., Suriyaphol, Prapat, Kamolwat, Phalin, Smithtikarn, Saijai, Disratthakit, Areeya, Regmi, Sanjib Mani, Leechawengwongs, Manoon, Twee-Hee Ong, Rick, Teo, Yik Ying, Tongsima, Sissades, Clark, Taane G., Chaiprasert, Angkana
27 June 2021
Data for: "Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus". (2021)
Spadar, Anton, Phelan, Jody, Diez-Benavente, Ernest, Campos, Monica, Gomez, Lara Ferrero, Mohareb, Fady, Clark, Taane G., Campino, Susana
31 August 2021
Additional file 1 of GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning. (2021)
Gröschel, Matthias I., Owens, Martin, Freschi, Luca, Vargas, Roger, Marin, Maximilian G., Phelan, Jody, Iqbal, Zamin, Dixit, Avika, Farhat, Maha R.
30 December 2022
TBProfiler for automated calling of the association with drug resistance of variants in Mycobacterium tuberculosis. S1 File. (2022)
Verboven, Lennert, Phelan, Jody, Heupink, Tim H., Van Rie, Annelies
TBProfiler for automated calling of the association with drug resistance of variants in Mycobacterium tuberculosis. S2 File. (2022)
Verboven, Lennert, Phelan, Jody, Heupink, Tim H., Van Rie, Annelies
13 August 2024
Additional file 1 of Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data. (2024)
Spadar, Anton, Phelan, Jody, Clark, Taane G., Campino, Susana
Additional file 3 of Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data. (2024)
Spadar, Anton, Phelan, Jody E., Clark, Taane G., Campino, Susana