jodyphelan/pathogen-profiler

Phelan, JORCID logo; van Heusden, PORCID logo; Meuli, M and Cuddihy, T (2025). jodyphelan/pathogen-profiler. [Dataset]. Github. https://github.com/jodyphelan/pathogen-profiler
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The Pathogen-Profiler library gives access to classes and functions to create a profiling tool to look for mutations in NGS data. It is used as the scaffolding for TBProfiler.

Keywords

DNA sequencing; RNA sequencing

Item Type Dataset
Resource Type
Resource Type
Resource Description
Software
Python script
Capture method Other
Date 15 July 2025
Language(s) of written materials English
Creator(s) Phelan, JORCID logo; van Heusden, PORCID logo; Meuli, M and Cuddihy, T
LSHTM Faculty/Department Faculty of Infectious and Tropical Diseases > Department of Infection Biology
Research Group Centre
Participating Institutions London School of Hygiene & Tropical Medicine, London, United Kingdom
Date Deposited 11 Jun 2025 15:05
Last Modified 09 Sep 2025 10:11
Publisher Github

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