Data Collection

Brodrick, HJ, Raven, KE, Harrison, EM, Blane, B, Reuter, S, Török, ME, Parkhill, J and Peacock, S (2016). Whole-genome sequencing reveals transmission of vancomycin-resistant Enterococcus faecium in a healthcare network. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3641945_D1.v1

Joshua, G (2014). Transcription profiling by array of Caenorhabditis elegans with biofilm compared to without biofilm. [Data Collection]. ArrayExpress. http://www.ebi.ac.uk/arrayexpress/experiments/E-MEXP-2981/

Kliemann, BS, Levin, AS, Moura, ML, Boszczowski, I and Lewis, JJ (2016). Data from: Socioeconomic determinants of antibiotic consumption in the state of São Paulo, Brazil: the effect of restricting over-the-counter sales. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.mt685

Kumar, N, Browne, HP, Viciani, E, Forster, SC, Clare, S, Harcourt, K, Stares, MD, Dougan, G, Fairley, DJ, Roberts, P, Pirmohamed, M, Clokie, MRJ, Jensen, MBF, Hargreaves, KR, Ip, M, Wieler, LH, Seyboldt, C, Norén, T, Riley, TV, Kuijper, EJ, Wren, BW and Lawley, TD (2019). Adaptation of host transmission cycle during Clostridium difficile speciation. [Data Collection]. Nature Genetics. https://doi.org/10.1038/s41588-019-0478-8

Lakhani, A, Olearnik, H and Eayres, D (2007). Compendium of Clinical and Health Indicators. [Data Collection]. NHS Digital. https://digital.nhs.uk/data-and-information

London School of Hygiene & Tropical Medicine (2019). Genome-wide analysis of population structure and adaptation of Plasmodium knowlesi in peninsular Malaysia. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB33025

London School of Hygiene & Tropical Medicine (2018). Methylation and transcription analysis of Mycobacterium tuberculosis. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB29197

London School of Hygiene & Tropical Medicine (2020). P.vivax whole genome sequencing. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB36199

London School of Hygiene & Tropical Medicine (2018). Plasmodium knowlesi SWGA in clinical isolates. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB28192

London School of Hygiene & Tropical Medicine (2019). Selective Whole Genome Amplification of Plasmodium malariae DNA from clinical samples reveals high genetic diversity and population structure of this neglected malaria parasite. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB33837

London School of Hygiene & Tropical Medicine (2019). Transgenic P. knowlesi orthologue replacement lines provide surrogates for P. vivax vaccine development and Duffy Binding Protein tropism studies. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB30925

London School of Hygiene & Tropical Medicine (2019). An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/data/view/PRJEB34919

Reuter, S, Török, ME, Holden, MT, Reynolds, R, Raven, KE, Blane, B, Donker, T, Bentley, SD, Aanensen, DM, Grundmann, H, Feil, EJ, Spratt, BG, Parkhill, J and Peacock, S (2015). Staphylococcus Aureus BSAC study data. [Data Collection]. European Nucleotide Archive. http://www.ebi.ac.uk/ena/data/view/ERP001012

Schnapp, LM, Blount, RJ, Daly, KR, Fong, S, Chang, E, Grieco, K, Greene, M, Stone, S, Balmes, J, Miller, RF, Walzer, PD and Huang, L (2017). Effects of clinical and environmental factors on bronchoalveolar antibody responses to Pneumocystis jirovecii: A prospective cohort study of HIV+ patients. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0180212

Sheehy, SH, Duncan, CJA, Elias, SC, Biswas, S, Collins, KA, O'hara, G, Halstead, FD, Ewer, KJ, Mahungu, T, Spencer, AJ, Miura, K, Poulton, ID, Dicks, MDJ, Edwards, NJ, Berrie, E, Moyle, S, Colloca, S, Cortese, R, Gantlett, K, Long, CA, Lawrie, AM, Gilbert, SC, Doherty, T, Nicosia, A, Hill, AVS and Draper, SJ (2012). Phase Ia clinical evaluation of the safety and immunogenicity of the Plasmodium falciparum blood-stage antigen AMA1 in ChAd63 and MVA vaccine vectors. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.24.

Tang, W, Chen, W, Amini, A, Boeras, D, Falconer, J, Kelly, H, Peeling, R, Varsaneux, O, Tucker, JD and Easterbrook, P (2017). Diagnostic accuracy of tests to detect Hepatitis C antibody: a meta-analysis and review of the literature. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3919648.v1

Van hoek, AJ, Andrews, N, Campbell, H, Amirthalingam, G, Edmunds, WJ and Miller, E (2018). Social contact data for UK. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.1409506

World Health Organization and International Collaborative Study of Medical Care Utilization (1981). WHO/ICS Medical Care Utilization Study Data, 1968-1969. [Data Collection]. UK Data Service, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-1427-1