A

Aghaji, A, Burchett, HED, Hameed, S and Gilbert, C (2022). Collection tools for: "Assessing the capacity of primary health care facilities in Nigeria to deliver eye health promotion: Results of a mixed-methods feasibility study". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003208.

Armitage, E (2022). SpyCATS REDCap Data Dictionary. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.7463051

B

Baiden, F, Fleck, S, Leigh, B, Ayieko, P, Tindanbil, D, Otieno, T, Lawal, B, Tehtor, M, Rogers, M, Odeny, L, Hodges, MH, Sonnie, M, Samai, M, Ishola, D, Lowe, B, Watson-jones, D and Greenwood, B (2022). Prevalence of malaria and helminth infections in rural communities in northern Sierra Leone, a baseline study to inform Ebola vaccine study protocols. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0270968.s001

Beiras, CG, Marks, M, Quintó, L, Gavilán, S, Kolmau, R, Ubals, M, Vall-Mayans, M and Mitjà, O (2022). Dataset of active ulcer cases included in the analysis. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010197.s001

Burke, R (2022). rachaelmburke/tbacf. [Data Collection]. Github. https://github.com/rachaelmburke/tbacf

Butcher, RMR, Mccormick, I and RAAB Team (2022). raabteam/raab7-analysis. [Data Collection]. Github. https://github.com/raabteam/raab7-analysis

C

Colvin, C, Swartz, A, Kallon, I, Kielmann, K and Macgregor, H (2022). Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research Question 1 - describe IPC policy and systems context. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.16438842.v1

Colvin, C, Swartz, A, Kallon, I, Kielmann, K and Macgregor, H (2022). Umoya omuhle: Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care: A whole systems approach. Research Questions 3 and 4_KwaZulu Natal. [Data Collection]. University of Cape Town. https://doi.org/10.25375/uct.14873202.v1

Coulibaly, A, Diop, MF, Kone, A, Dara, A, Ouattara, A, Mulder, N, Miotto, O, Diakite, M, Djimde, A and Amambua-Ngwa, A (2022). Table1_Genome-wide SNP analysis of Plasmodium falciparum shows differentiation at drug-resistance-associated loci among malaria transmission settings in southern Mali. [Data Collection]. Frontiers. https://doi.org/10.3389/fgene.2022.943445.s002

D

Dewez, JE and Yeung, S (2022). Data for: “Adoption of C-reactive protein rapid tests in primary care in the Netherlands and England: a comparative health systems analysis”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002758.

Dewez, M and Yeung, S (2022). Data for: "Availability and use of rapid diagnostic tests for the management of acute childhood infections in Europe". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003104.

Dziva Chikwari, C (2022). Community based interventions to improve HIV outcomes in youth: a cluster randomised trial in Zimbabwe (CHIEDZA). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002718.

F

Falconer, J (2022). Search strategy for the systematic review informing recommendations 6 & 7 of the WHO Guideline 'Responding to children and adolescents who have been sexually abused'. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001023.

Feasey, H (2022). SCALE prevalence survey. [Data Collection]. Open Science Framework. https://osf.io/eu2xf/

G

Govender, I (2022). Infection prevention and control for drug-resistant tuberculosis in South Africa in the era of decentralised care:a whole systems approach. [Data Collection]. AHRI Data Repository. https://doi.org/10.23664/AHRI.UmoyaOmuhle.Datasets

Grant, AD and Kielmann, K (2022). Qualitative and Quantitative Data for Tuberculosis Infection Prevention and Control in KwaZulu-Natal and Western Cape, South Africa, 2018-2021. [Data Collection]. UK Data Service, Colchester, Essex, United Kingdom. https://doi.org/10.5255/UKDA-SN-854435

Grant, AD, Wong, E, Leslie, A, Karat, A, Fentress, M, Maharaj, P and Henwood, P (2022). Evaluation of ultrasound for screening and diagnosis of pulmonary tuberculosis, KwaZulu Natal, South Africa, 2019-20. [Data Collection]. Africa Health Research Institute. https://doi.org/10.23664/AHRI.POCUS.ANALYTICALDATASET.2022.V1

Grant, A and Kielmann, K (2022). Qualitative and quantitative data for tuberculosis Infection prevention and control in South Africa (KwaZulu-Natal and Western Cape). [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom, South Africa. https://doi.org/10.17037/DATA.00002919.

Guzman, FD, Iwamoto, Y, Saito, N, Salva, EP, Dimaano, EM, Nishizono, A, Suzuki, M, Oloko, O, Ariyoshi, K, Smith, C, Parry, CM and Solante, RM (2022). Clinical, epidemiological, and spatial features of human rabies cases in Metro Manila, the Philippines from 2006 to 2015. Study data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010595.s004

H

Herrmann, Y, Lainati, F, del Mar Castro, M, Mwamba, C, Kumwenda, M, Muyoyeta, M, Broger, T, Heinrich, N, Olbrich, L, Corbett, EL, McMahon, S, Engel, N and Denkinger, C (2022). User perspectives and preferences on a novel TB LAM diagnostic (Fujifilm SILVAMP TB LAM) – a qualitative study in Malawi and Zambia [data]. [Data Collection]. heiDATA. https://doi.org/10.11588/data/PLRQCZ

Houghton, J (2022). F6 M. tb knock out mutant Vs wildtype after 24hrs starvation in PBS Tyloxapol. [Data Collection]. Biostudies. https://www.ebi.ac.uk/biostudies/arrayexpress/studies/E-MTAB-9327

J

Jarju, S, Senghore, E, Brotherton, H, Saidykhan, A, Jallow, S, Krubally, E, Sinjanka, E, Ndene, MN, Bajo, F, Sanyang, MM, Saidy, B, Bah, A, Mohammed, NI, Forrest, K, Clarke, E, Dalessandro, U, Sesay, AK, Usuf, E, Cerami, C, Roca, A, Kampmann, B and De silva, T (2022). Circulation of respiratory viruses during the COVID-19 pandemic in the Gambia. [Data Collection]. Open Science Framework. https://doi.org/10.17605/OSF.IO/TSF78

K

Kaswaswa, K, MacPherson, P, Kumwenda, M, Mpunga, J, Thindwa, D, Nliwasa, M, Mwapasa, M, Odland, J, Tomoka, T, Chipungu, G, Mukaka, M and Corbett, EL (2022). Effect of patient-delivered household contact tracing and prevention for tuberculosis: A household cluster-randomised trial in Malawi. Data. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.1371/journal.pone.0269219.s002

Keay, L, Ren, K, Nguyen, H, Vajdic, C, Odutola, M, Gyawali, R, Toomey, M, Peters, R, Ee, N, Dillon, L, Hackett, M, Ah Tong, B, D'Esposito, F, Faulmann, D, Burton, MJ, Ramke, J and Jalbert, I (2022). Supporting data for: Risk factors common to leading eye health conditions and major non-communicable diseases: A rapid review and commentary. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.gxd2547q0

Kheang, ST, Ridley, R, Ngeth, E, Ir, P, Pengby, N, Sovannaroth, S, Lek, D, Phon, S, Kak, N and Yeung, S (2022). Feasibility and acceptability of G6PD testing and radical cure for Plasmodium vivax in Cambodia: the VIGTARC study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002333.

Kumar, N, Corpus, I, Hans, M, Harle, N, Yang, N, McDonald, C, Sakai, SN, Janmohamed, K, Chen, K, Altice, FL, Tang, W, Schwartz, JL, Jones-Jang, SM, Saha, K, Memon, SA, Bauch, CT, Choudhury, MD, Papakyriakopoulos, O, Tucker, JD, Goyal, A, Tyagi, A, Khoshnood, K and Omer, S (2022). COVID-19 Vaccine Perceptions on Reddit. [Data Collection]. OSF. https://osf.io/urp2a/

L

Lawrence, D, Ssali, A, Moshashane, N, Nabaggala, G, Maphane, L, Harrison, T, Meya, D, Jarvis, J and Seeley, J (2022). Support files for: The acceptability of the AMBITION-cm treatment regimen for HIV-associated cryptococcal meningitis: findings from a qualitative methods study of participants and researchers in Botswana and Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003106.

M

MacPherson, E, Dixon, J, Sanudi, E, Nkaombe, A, Reynolds, J, Roberts, C, Lal, S and Chandler, C (2022). FIEBRE Social Science - Malawi. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001771.

Mainga, T, Gondwe, M, Mactaggart, I, Stewart, RC, Shanaube, K, Ayles, H and Bond, V (2022). Additional file 1 of Qualitative study of patient experiences of mental distress during TB investigation and treatment in Zambia. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.20342552.v1

McQuaid, CF, Henrion, MYR, Burke, RM, MacPherson, P, Nzawa-Soko, R and Horton, KC (2022). Additional file 1 of Inequalities in the impact of COVID-19-associated disruptions on tuberculosis diagnosis by age and sex in 45 high TB burden countries. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.21550982.v1

Mcharo, R (2022). STIs prevalence among young adults aged 18-24years in Mbeya-Tanzania. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19093115.v3

Morhason-Bello, IO, Baisley, K, Pavon, MA, Adewole, IF, Bakare, RA, de Sanjosé, S, Francis, SC and Watson-jones, D (2022). Concordance of genotype specific HPV infections across the four anatomic sites. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0265269.s004

O

Olubiyi, OA, Rotimi, BF, Afolayan, MA, Alatishe-Muhammad, BW, Olubiyi, OM and Dahiru Balami, A (2022). Additional file 1 of The ten-year risk of developing cardiovascular disease among public health workers in North-Central Nigeria using Framingham and atherogenic index of plasma risk scores. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19669987.v1

P

Parker, E and Horne, E (2022). opensafely/ckd-coverage-ve. [Data Collection]. Github. https://github.com/opensafely/ckd-coverage-ve

Pickering, H, Hart, JD, Burr, S, Stabler, R, Maleta, K, Kalua, K, Bailey, RL and Holland, MJ (2022). Additional file 1 of Impact of azithromycin mass drug administration on the antibiotic-resistant gut microbiome in children: a randomized, controlled trial. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.17982643.v1

Pierret, A, Ribolzi, O, Pongmala, K, Oliva, P, Pando, A, Davong, V, Rattanavong, S, Silvera, N, Luangraj, M, Boithias, L, Xayyathip, K, Menjot, L, Macouin, M, Rochelle-Newall, E, Robain, H, Vongvixay, A, Simpson, AJH and Dance, DAB (2022). Distribution of Burkholderia pseudomallei and soil properties within a 300-cm deep profile. [Data Collection]. DataSuds. https://doi.org/10.23708/L3IJGD

Putri, AI, de Sabbata, K, Agusni, RI, Alinda, MD, Darlong, J, De Barros, B, Walker, SL, Zweekhorst, MBM and Peters, RMH (2022). Understanding leprosy reactions and the impact on the lives of people affected: An exploration in two leprosy endemic countries. Socio-demographic data. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010476.s001

Putri, AI, de Sabbata, K, Agusni, RI, Alinda, MD, Darlong, J, de Barros, B, Walker, SL, Zweekhorst, MBM and Peters, RMH (2022). Understanding leprosy reactions and the impact on the lives of people affected: An exploration in two leprosy endemic countries. Interview Guide for People with Leprosy Reactions. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010476.s002

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Rehman, AM, Simms, V, McHugh, G, Mujuru, H, Ngwira, LG, Semphere, R, Moyo, B, Bandason, T, Odland, JO and Ferrand, RA (2022). Adherence to additional medication for management of HIV-associated comorbidities among older children and adolescents taking antiretroviral therapy. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0269229.s001

Reichenberger, V (2022). Participatory Visual Methods with caregivers of children with Congenital Zika Syndrome in Colombia: A case study. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002745.

Roberts, C (2022). chrissyhroberts/OMR_LSHTM. [Data Collection]. Github. https://github.com/chrissyhroberts/OMR_LSHTM

Roberts, C and Bustinduy, A (2022). Female Genital Schistosomiasis - Medical Training Device. [Data Collection]. Thingiverse. https://www.thingiverse.com/thing:5389502

Roberts, C and Bustinduy, A (2022). Swabbable Vagina and Vulva - Medical training device. [Data Collection]. Thingiverse. https://www.thingiverse.com/thing:5389526

Roberts, C, Stott, C, Lal, S, Marks, M, Shawe-Taylor, M and Chaudhry, Z (2022). Biometric linkage of longitudinally collected electronic case report forms and confirmation of subject identity: An open framework for Open Data Kit (ODK) and related tools. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003115.

Robinson, A, Versteeg, B, Shafi Abdurahman, O, Clatworthy, I, Shuka, G, Debe, D, Hordofa, G, Reis de Oliveira Gomes, L, Abraham Aga, M, Dumessa, G, Sarah, V, Macleod, D, Last, AR, Burton, MJ and Logan, JG (2022). Field entomology data from Ethiopian trachoma population survey and laboratory transmission experiments for Musca sorbens and Chlamydia trachomatis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003114.

Rodriguez, CA, Lodi, S, Horsburgh, CR, Bastard, M, Hewison, C, Huerga, H, Khan, M, Khan, PY, Khan, U, Oyewusi, L, Padayachee, S, Mitnick, CD and Franke, MF (2022). Selection bias in multidrug-resistant tuberculosis cohort studies assessing sputum culture conversion. S1 Data. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0276457.s003

Rotsaert, A, Sibanda, E, Hatzold, K, Johnson, C, Corbett, E, Neuman, M and Cowan, F (2022). Additional file 1 of Did you hear about HIV self-testing? HIV self-testing awareness after community-based HIVST distribution in rural Zimbabwe. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.18393032.v1

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Saito, N, Solante, RM, Guzman, FD, Telan, EO, Umipig, DV, Calayo, JP, Frayco, CH, Lazaro, JC, Ribo, MR, Dimapilis, AQ, Dimapilis, VO, Villanueva, AM, Mauhay, JL, Suzuki, M, Yasunami, M, Koizumi, N, Kitashoji, E, Sakashita, K, Yasuda, I, Nishiyama, A, Smith, C, Ariyoshi, K and Parry, CM (2022). A prospective observational study of community-acquired bacterial bloodstream infections in Metro Manila, the Philippines. Data file of the study. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0010414.s003

Shanaube, K, Gachie, T, Hoddinott, G, Schaap, A, Floyd, S, Mainga, T, Bond, V, Hayes, R, Fidler, S and Ayles, H (2022). Depressive symptoms and HIV risk behaviours among adolescents enrolled in the HPTN071 (PopART) trial in Zambia and South Africa. Aggregate dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278291.s012

Simons, D (2022). DidDrog11/lassa_underreporting. [Data Collection]. Github. https://github.com/DidDrog11/lassa_underreporting

Sturt, A, Webb, E, Bristowe, H and Bustinduy, A (2022). Data for: Expert review of images from hand-held colposcopy in Zambian women with genital schistosomiasis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00003182.

Sturt, A, Webb, E and Bustinduy, A (2022). Data for: “The presence of hemoglobin in cervicovaginal lavage is not associated with genital schistosomiasis in Zambian women from the BILHIV study”. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002983.

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Tandon, R, Vashist, P, Gupta, N, Gupta, V, Yadav, S, Deka, D, Singh, S, Vishwanath, K and Murthy, G (2022). ICMR_Pterygium_Study_Data.csv. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.19626003.v1

Thindwa, D, Jambo, KC, Ojal, J, MacPherson, P, Dennis Phiri, M, Pinsent, A, Khundi, M, Chiume, L, Gallagher, KE, Heyderman, RS, Corbett, EL, French, N and Flasche, S (2022). deusthindwa/social.contact.rates.estimation.hiv.malawi. [Data Collection]. Github. https://github.com/deusthindwa/social.contact.rates.estimation.hiv.malawi

Timire, C, Sandy, C, Ferrand, RA, Mubau, R, Shiri, P, Mbiriyawanda, O, Mbiba, F, Houben, Rein M. G. J., Pedrazzoli, D, Bond, V, Foster, N and Kranzer, K (2022). Dataset: Cash transfer project. [Data Collection]. PLOS Global Public Health. https://doi.org/10.1371/journal.pgph.0001027.s004