jodyphelan/pathogen-profiler

Phelan, JORCID logo, van Heusden, PORCID logo, Meuli, M and Cuddihy, T (2025). jodyphelan/pathogen-profiler. [Dataset]. Github. https://github.com/jodyphelan/pathogen-profiler
Copy

The Pathogen-Profiler library gives access to classes and functions to create a profiling tool to look for mutations in NGS data. It is used as the scaffolding for TBProfiler.

Keywords

DNA sequencing; RNA sequencing

Item Type Dataset
Resource Type
Resource Type
Resource Description
Software
Python script
Capture method Other
Date 15 July 2025
Language(s) of written materials English
Creator(s) Phelan, JORCID logo, van Heusden, PORCID logo, Meuli, M and Cuddihy, T
LSHTM Faculty/Department Faculty of Infectious and Tropical Diseases > Department of Infection Biology
Research Group Centre
Participating Institutions London School of Hygiene & Tropical Medicine, London, United Kingdom
Date Deposited 11 Jun 2025 15:05
Last Modified 09 Sep 2025 10:11
Publisher Github

Explore Further

  • Github (Online Data Resource)

No files available. Please consult associated links.

  • Github (Online Data Resource)

Atom BibTeX OpenURL ContextObject in Span Multiline CSV OpenURL ContextObject Dublin Core (with Type as Type) MPEG-21 DIDL Data Cite XML EndNote HTML Citation JSON METS MODS RDF+N3 RDF+N-Triples RDF+XML Reference Manager Refer Simple Metadata ASCII Citation EP3 XML
Export