Data extraction results for a scoping review on AMR in food crops

Brunn, AORCID logo and Waage, J (2024). Data extraction results for a scoping review on AMR in food crops. [Dataset]. London School of Hygiene & Tropical Medicine, London, United Kingdom. 10.17037/DATA.00003087.
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Data extracted from published peer-reviewed and grey literature that summarise antimicrobial sensitivity testing data and sensitivity results.

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Researchers wishing to access the dataset are invited to complete the request form.

Keywords

Food crops, Antimicrobial resistance, Agriculture, Environmental sampling

Item Type Dataset
Description of data capture Data extraction from peer-reviewed or grey literature published online obtained through bibliographic search methods. A data extraction template in Microsoft Excel was developed with input from members of the advisory group. Studies underwent data extraction by a single person, this data was validated using a cross-over method to identify missed information or disagreements, which were subsequently resolved by consensus or a third person. Data points include study characteristics, study methods and samples, antimicrobial susceptibility test results and antimicrobial resistance genes that have been reported by authors relevant to the food crop value chain. Data extraction results are stratified within the table initially by sample type, then by microbial species, and finally by (phenotypic) antimicrobial sensitivity results.
Capture method Compilation/Synthesis, Aggregation
Collection Period
From
To
January 2020
July 2020
Date 16 September 2024
Language(s) of written materials English, Swahili
Creator(s) Brunn, AORCID logo and Waage, J
Associated roles Kadri-Alabi, Z (Data Collector)
LSHTM Faculty/Department Faculty of Epidemiology and Population Health > Dept of Population Health (2012- )
Faculty of Infectious and Tropical Diseases > Dept of Disease Control
Participating Institutions London School of Hygiene & Tropical Medicine, London, United Kingdom
Funders
Project
Funder
Grant Number
Funder URI
AMR in Food Crops Scoping Study
Consortium of International Agricultural Research Centers
ITDCZL8410
http://dx.doi.org/10.13039/501100015815
Date Deposited 16 Sep 2024 13:09
Last Modified 18 Sep 2024 12:02
Publisher London School of Hygiene & Tropical Medicine

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ScR_AMR_Crops_data_extraction.csv
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Data_extraction_guidance.pdf
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3087-UserGuide.html
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