Rahman, SIA, Dyson, ZA, Klemm, EJ, Khanam, F, Holt, KE, Chowdhury, EK, Dougan, G and Qadri, F. 2020. Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016. [Online]. PLOS Neglected Tropical Diseases. Available from: https://doi.org/10.1371/journal.pntd.0008036
Rahman, SIA, Dyson, ZA, Klemm, EJ, Khanam, F, Holt, KE, Chowdhury, EK, Dougan, G and Qadri, F. Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016 [Internet]. PLOS Neglected Tropical Diseases; 2020. Available from: https://doi.org/10.1371/journal.pntd.0008036
Rahman, SIA, Dyson, ZA, Klemm, EJ, Khanam, F, Holt, KE, Chowdhury, EK, Dougan, G and Qadri, F (2020). Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0008036
Description
Supporting files for a paper titled "Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016". It contains supporting image of population structure and country of origin of genotype 3.3.2 isolates (S1 Figure); an image of Bangladesh S. Typhi population structure showing acquired AMR genes, and plasmids (S2 Figure); an Excel spreadsheet containing data of 202 S. Typhi isolates from 3 different study sites in Dhaka, Bangladesh between 2004–2016; an Excel spreadsheet outlining excluded repetitive and phage regions in CT18 (AL513382) reference genome (S2 Table); Excel data of 818 S. Typhi isolates from Bangladesh including previous studies between 1998–2016 (S3 Table); a Word document of Genotyping results for the 818 S. Typhi isolates from Bangladesh (S4 Table); and a Word document of genetic determinants of antimicrobial resistance in S. Typhi isolates from Bangladesh (S5 Table).
| Data capture method | Unknown |
|---|---|
| Date (Date published in a 3rd party system) | 10 March 2020 |
| Language(s) of written materials | English |
| Data Creators | Rahman, SIA, Dyson, ZA, Klemm, EJ, Khanam, F, Holt, KE, Chowdhury, EK, Dougan, G and Qadri, F |
|---|---|
| LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Dept of Immunology and Infection |
| Research Centre | Antimicrobial Resistance Centre (AMR) |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Date Deposited | 22 Oct 2021 14:27 |
|---|---|
| Last Modified | 22 Oct 2021 14:27 |
| Publisher | PLOS Neglected Tropical Diseases |
