Adaptation of host transmission cycle during Clostridium difficile speciation

Kumar, N, Browne, HP, Viciani, E, Forster, SC, Clare, S, Harcourt, K, Stares, MD, Dougan, G, Fairley, DJ, Roberts, P, Pirmohamed, M, Clokie, MRJ, Jensen, MBF, Hargreaves, KR, Ip, M, Wieler, LH, Seyboldt, C, Norén, T, Riley, TV, Kuijper, EJ, Wren, BWORCID logo and Lawley, TD (2019). Adaptation of host transmission cycle during Clostridium difficile speciation. [Dataset]. Nature Genetics. https://doi.org/10.1038/s41588-019-0478-8
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Genomes have been deposited in the European Nucleotide Archive. Accession codes are listed in Supplementary Table 1. The 13 C. difficile reference isolates (Supplementary Table 2) are publicly available from the NCTC and the annotation of these genomes are available from the Host-Microbiota Interactions Laboratory (HMIL; www.lawleylab.com), Wellcome Sanger Institute.

Keywords

Bacterial species, Genetic adaptations, Clostridium difficile

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