Potential for large outbreaks of Ebola virus disease: Supplementary Data

Camacho, AORCID logo, Kucharski, AORCID logo, Funk, SORCID logo, Breman, J, Piot, P and Edmunds, JORCID logo (2014). Potential for large outbreaks of Ebola virus disease: Supplementary Data. [Dataset]. London School of Hygiene & Tropical Medicine, London, United Kingdom. 10.17037/DATA.27.
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Outbreaks of Ebola virus can cause substantial morbidity and mortality in affected regions. The largest outbreak of Ebola to date is currently underway in West Africa, with 3944 cases reported as of 5th September 2014. To develop a better understanding of Ebola transmission dynamics, we revisited data from the first known Ebola outbreak, which occurred in 1976 in Zaire (now Democratic Republic of Congo). By fitting a mathematical model to time series stratified by disease onset, outcome and source of infection, we were able to estimate several epidemiological quantities that have previously proved challenging to measure, including the contribution of hospital and community infection to transmission. We found evidence that transmission decreased considerably before the closure of the hospital, suggesting that the decline of the outbreak was most likely the result of changes in host behaviour. Our analysis suggests that the person-to-person reproduction number was 1.34 (95% CI: 0.92–2.11) in the early part of the outbreak. Using stochastic simulations we demonstrate that the same epidemiological conditions that were present in 1976 could have generated a large outbreak purely by chance. At the same time, the relatively high person-to-person basic reproduction number suggests that Ebola would have been difficult to control through hospital-based infection control measures alone.

Keywords

Ebola, Zaire outbreak, Mathematical model, Basic reproduction number

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Daily incidence time series of Ebola virus disease onsets in 1976
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Schematic of model structure
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Comparison of our fitted model and observed daily incidence time series (black dots) reconstructed from the line list of Ebola cases in Zaire in 1976
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Drop in the reproduction number (R(t)) owing to change of behaviour in community contacts and visit of outpatients to the hospital
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Potential alternative trajectories of an Ebola outbreak in Yambuku
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Distribution of Ebola outbreak sizes in different scenarios
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mmc2.txt
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Data
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MMC2 - Supplementary data. See paper for context
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table1.csv
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Data
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Previously published estimates of basic reproduction number, R0, for Ebola
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table2.csv
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Parameter definitions and corresponding estimates. Prior distributions used during model fitting are also shown
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table3.csv
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Estimates of the basic reproduction number, R0, split into different component transmission routes.
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SupplementaryMaterial.pdf
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Documentation
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Dataset documentation
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