18 January 2016

Karkey, A, Jombart, T, Walker, AW, Thompson, CN, Torres, A, Dongol, S, Tran Vu Thieu, N, Pham Thanh, D, Tran Thi Ngoc, D, Voong Vinh, P, Singer, AC, Parkhill, J, Thwaites, G, Basnyat, B, Ferguson, N and Baker, S (2016). The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water. [Data Collection]. PLOS Neglected Tropical Diseases. https://doi.org/10.1371/journal.pntd.0004346

2 May 2018

Jeffries, CL, Rogers, ME and Walker, T (2018). Establishment of a method for Lutzomyia longipalpis sand fly embryo microinjection: the first step towards potential novel control strategies for leishmaniasis. [Data Collection]. OSF. https://doi.org/10.17605/OSF.IO/S7CZP

17 April 2019

Strongman, H (2019). Covariate Code List - ACE inhibitors. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001126.

Strongman, H (2019). Covariate Code List - ARBs. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001127.

Bhaskaran, K (2019). Covariate Code List - Alcohol status. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001121.

Strongman, H (2019). Covariate Code List - Beta blockers. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001125.

Forbes, H and Strongman, H (2019). Covariate Code List - COPD. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001134.

Wing, K and Strongman, H (2019). Covariate Code List - Chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001137.

Strongman, H (2019). Covariate Code List - Coeliac disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001141.

Bhaskaran, K (2019). Covariate Code List - Diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001122.

Bhaskaran, K and Strongman, H (2019). Covariate Code List - Diabetes drugs. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001123.

Strongman, H (2019). Covariate Code List - Hormone Replacement Therapy. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001129.

Strongman, H (2019). Covariate Code List - Hysterectomy. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001130.

Forbes, H and Strongman, H (2019). Covariate Code List - Immunosuppressive disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001138.

Strongman, H (2019). Covariate Code List - Immunosuppressive drugs. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001139.

Forbes, H and Strongman, H (2019). Covariate Code List - Lupus. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001132.

Strongman, H (2019). Covariate Code List - Migraine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001135.

Strongman, H (2019). Covariate Code List - NSAIDs. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001128.

Strongman, H (2019). Covariate Code List - Obstructive sleep apnoea. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001140.

Matthews, A and Strongman, H (2019). Covariate Code List - Rheumatoid arthritis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001131.

Strongman, H (2019). Covariate Code List - Sclerosis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001133.

Mansfield, K (2019). Covariate Code List - Serum creatinine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001136.

Strongman, H and Iwagami, M (2019). Covariate Code List - Severe mental illness. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001142.

Bhaskaran, K (2019). Covariate Code List - Smoking status. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001120.

Strongman, H (2019). Covariate Code List - Statins. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001124.

Bhaskaran, K, Matthews, A, Smeeth, L and Strongman, H (2019). Exposure Code List - Cardiovascular disease (ICD-10). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001117.

Bhaskaran, K, Matthews, A, Smeeth, L and Strongman, H (2019). Exposure Code List - Cardiovascular disease (Read codes). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001116.

Bhaskaran, K, Matthews, A, Smeeth, L and Strongman, H (2019). Exposure Code List - Revascularisation (OPCS). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001119.

Bhaskaran, K (2019). Read / ICD-10 Code List - Cancer. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001114.

8 May 2019

Strongman, H, Bhaskaran, K, Matthews, A, Smeeth, L, Forbes, H, Mansfield, K and Iwagami, M (2019). Code lists used in "Medium and long-term risks of specific cardiovascular diseases among 108,215 survivors of 20 adult cancers: population-based cohort study using multiple linked UK electronic health records databases". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001113.

15 October 2019

Carreira, H and Funston, G (2019). Clinical Codelist - Anxiety Symptoms and Diagnoses. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001397.

Carreira, H and Funston, G (2019). Clinical Codelist - Breast Cancer Diagnoses. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001396.

Carreira, H and Funston, G (2019). Clinical Codelist - Cognitive Dysfunction (symptoms and diagnoses). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001417.

Carreira, H and Funston, G (2019). Clinical Codelist - Depression (symptoms and diagnoses). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001400.

Carreira, H and Funston, G (2019). Clinical Codelist - Fatigue (symptoms and diagnoses). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001419.

Carreira, H and Funston, G (2019). Clinical Codelist - Fatigue Syndrome. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001420.

Carreira, H and Funston, G (2019). Clinical Codelist - Female Sexual Dysfunction (symptoms and diagnoses). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001426.

Carreira, H and Funston, G (2019). Clinical Codelist - Pain (broad definition). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001423.

Carreira, H and Funston, G (2019). Clinical Codelist - Selected Anxiety Disorders. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001398.

Carreira, H and Funston, G (2019). Clinical Codelist - Selected Depressive Disorders. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001401.

Carreira, H and Funston, G (2019). Clinical Codelist - Selected Sexual Disorders. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001427.

Carreira, H and Funston, G (2019). Clinical Codelist - Self-harm. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001428.

Carreira, H and Funston, G (2019). Clinical Codelist - Sleep Disorder (symptoms and diagnoses). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001421.

Carreira, H and Funston, G (2019). Therapy Codelist - Antidepressants. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001402.

Carreira, H and Funston, G (2019). Therapy Codelist - Anxiety Drugs. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001399.

Carreira, H and Funston, G (2019). Therapy Codelist - Dementia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001418.

Carreira, H and Funston, G (2019). Therapy Codelist - Hypnotics. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001422.

Carreira, H and Funston, G (2019). Therapy Codelist - Opioids. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001424.

Carreira, H and Funston, G (2019). Therapy Codelist - Opioids excluding Codeine. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001425.

28 October 2019

Carreira, H and Funston, G (2019). Code lists for: "Risk of adverse mental health outcomes in women with history of breast cancer: a matched population-based cohort study in the United Kingdom (1988-2018)". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom, London, United Kingdom. https://doi.org/10.17037/DATA.00001429

12 December 2019

Sanya, R and Webb, E (2019). Contrasting impact of rural, versus urban, living on glucose metabolism and blood pressure in Uganda. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001528.

Pearson, C, Abbas, KM, Clifford, S, Flasche, S and Hladish, TJ (2019). denvax: Simple Dengue Test and Vaccinate Cost Thresholds. [Data Collection]. The Comprehensive R Archive Network. https://cran.r-project.org/web/packages/denvax/index.html

9 January 2020

Strongman, H and Bathe, K (2020). Clinical code list - Incompletely specified Cancer read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001545.

Bhaskaran, K (2020). Clinical code list - all Cancer read codes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001546.

27 January 2020

Strongman, H, Bathe, K and Bhaskaran, K (2020). Clinical code lists for: "Benefits and limitations of using individual and different combinations of linked English routine data sources in cancer epidemiology studies". [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom.

19 February 2020

Klepac, P, Kucharski, AJ, Conlan, AJ, Kissler, S, Tang, M, Fry, H and Gog, JR (2020). Contacts in context: large-scale setting-specific social mixing matrices from the BBC Pandemic project. [Data Collection]. Medrxiv. https://doi.org/10.1101/2020.02.16.20023754

24 March 2020

Cansado-Utrilla, C, Jeffries, CL, Kristan, M, Brugman, VA, Heard, P, Camara, G, Sylla, M, Beavogui, AH, Messenger, LA, Irish, SR and Walker, T (2020). An assessment of adult mosquito collection techniques for studying species abundance and diversity in Maferinyah, Guinea. [Data Collection]. Open Science Framework. https://osf.io/pfma3/

8 July 2020

Carreira, H (2020). Clinical Codelist - Product codes for pneumococcal vaccination. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001806.

Carreira, H (2020). Clinical Codelist - Read codes for pneumococcal vaccination. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001805.

Carreira, H (2020). Clinical codelist - Immunisation codes for pneumococcal vaccination. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001807.

10 July 2020

Carreira, H (2020). Clinical Codelist - Immunisation against Streptococcus pneumoniae. [Project]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001808.

21 May 2021

Davidson, J, Warren-Gash, C, Gayle, A, Strongman, H, Nissen, F and LSHTM Electronic Health Record team (2021). Clinical codelist - Asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002397.

Dedman, D, Carreira, H and Strongman, H (2021). Clinical codelist - Cancer. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002408.

Bhaskaran, K (2021). Clinical codelist - Cancer. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002409.

Davidson, J, Warren-Gash, C, Banerjee, A, Smeeth, L, Evans, D and Clay, S (2021). Clinical codelist - Cerebrovascular disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002394.

Davidson, J, Warren-Gash, C, Banerjee, A, Smeeth, L, Evans, D and Clay, S (2021). Clinical codelist - Chronic cardiac disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002392.

Davidson, J, Warren-Gash, C, Mcdonald, H, Gayle, A, Evans, D and Clay, S (2021). Clinical codelist - Chronic respiratory disease other than asthma. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002398.

Davidson, J and Warren-Gash, C (2021). Clinical codelist - Dementia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002402.

Davidson, J, Warren-Gash, C, Mcdonald, H, Banerjee, A, Smeeth, L, Evans, D and Clay, S (2021). Clinical codelist - Diabetes. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002407.

Davidson, J (2021). Clinical codelist - Hypertension. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002396.

Strongman, H, Forbes, H and Bhate, K (2021). Clinical codelist - Psoriasis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002400.

Strongman, H, Mansfield, K and LSHTM Electronic Health Records team (2021). Clinical codelist - Rheumatoid Arthritis. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002399.

LSHTM Electronic Health Research team (2021). Clinical codelist - Venous thromboembolism. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002395.

Davidson, J, Warren-Gash, C, Mcdonald, H, Evans, D and Clay, S (2021). Clinical codelist - chronic kidney disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002406.

Davidson, J, Warren-Gash, C and Mcdonald, H (2021). Clinical codelist - chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002404.

Davidson, J, Warren-gash, C, Mcdonald, H, Evans, D and Clay, S (2021). Clinical codelist - chronic liver disease. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002405.

Davidson, J, Warren-gash, C and LSHTM Electronic Health Records team (2021). Clinical codelist - chronic neurological conditions other than dementia. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002403.

Davidson, J, Warren-Gash, C and Cadogan, S (2021). Clinical codelist - learning disabilities. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002401.

Davidson, J, Warren-Gash, C, Mcdonald, H, Evans, D and Clay, S (2021). Clinical codelists - Immunosuppression. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002410.

Forbes, H and Carreira, H (2021). Risk factor codelist - Body Mass Index (BMI). [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002413.

Mathur, R (2021). Risk factor codelist - Ethnicity. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002414.

Bhaskaran, K (2021). Risk factor codelist - Smoking. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002412.

Forbes, H (2021). Risk factor codelist - smoking. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002411.

1 November 2021

Strongman, H and Carreira, H (2021). STATA Do files for "Factors associated with excess mortality in the first wave of COVID-19 pandemic in the UK: a cohort analysis using the Clinical Practice Research Databank". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002560.

16 September 2022

van zandvoort, K, Bobe, MO, Hassan, AI, Abdi, MI, Ahmed, MS, Soleman, SM, Warsame, MY, Wais, MA, Diggle, E, McGowan, CR, Satzke, C, Mulholland, K, Egeh, MM, Hassan, MM, Hergeeye, MA, Eggo, RM, Checchi, F and Flasche, S (2022). kevinvzandvoort/espicc-somaliland-digaale-survey-2019. [Data Collection]. GitHub. https://github.com/kevinvzandvoort/espicc_somaliland_digaale_contact_survey_2019

3 October 2022

London School of Hygiene & Tropical Medicine (2022). Environmental detection of vector larvae. [Data Collection]. National Center for Biotechnology Information. https://www.ncbi.nlm.nih.gov/bioproject/PRJEB56414

14 December 2022

Klim, H and Fornace, KM (2022). hklim06/Quantifying-human-animal-contact-rates-in-Malaysian-Borneo. [Data Collection]. GitHub. https://github.com/hklim06/Quantifying-human-animal-contact-rates-in-Malaysian-Borneo

20 February 2023

Phelan, J and Manko, E (2023). jodyphelan/malaria-db. [Data Collection]. GitHub. https://github.com/jodyphelan/malaria-db

16 November 2023

Phelan, J and Thorpe, J (2023). jodyphelan/malaria-profiler. [Data Collection]. GitHub. https://github.com/jodyphelan/Malaria-Profiler

20 November 2023

Gibb, R (2023). rorygibb/dengue_vietnam_ms: v1.0.0: Code base for Nature Communications MS. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.10159288