Data Collection

Agomo, CO, Oyibo, WA, Sutherland, C, Hallet, R and Oguike, MC (2016). Data from: Assessment of markers of antimalarial drug resistance in Plasmodium falciparum isolates from pregnant women in Lagos, Nigeria. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.b3f50

Anvikar, AR, Anna Maria van Eijk, Shah, A, Upadhyay, KJ, Sullivan, S, Patel, AJ, Joshi, JM, Tyagi, S, Singh, R, Gupta, H, Wassmer, S and Carlton, J (2020). Dataset: India ICEMR Severe P. vivax and falciparum Cohort. [Data Collection]. ClinEpiDB. https://clinepidb.org/ce/app/workspace/analyses/DS_3b4a4e8f09

Band, G, Leffler, EM, Jallow, M, Sisay-Joof, F, Ndila, CM, Macharia, AW, Hubbart, C, Jeffreys, AE, Rowlands, K, Nguyen, T, Goncalves, SM, Ariani, CV, Stalker, J, Pearson, RD, Amato, R, Drury, E, Sirugo, G, D'Alessandro, U, Bojang, KA, Marsh, K, Peshu, N, Conway, DJ, Williams, TN, Rockett, KA and Kwiatkowski, DP (2021). A dataset of human and Plasmodium falciparum genotypes in severe malaria cases from The Gambia and Kenya. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.4973476

Bastiaens, GJH, Tiono, AB, Okebe, J, Pett, HE, Coulibaly, SA, Gonçalves, BP, Affara, M, Ouédraogo, A, Bougouma, EC, Sanou, GS, Nébié, I, Bradley, J, Lanke, KHW, Niemi, M, Sirima, SB, d’Alessandro, U, Bousema, T and Drakeley, C (2018). Data from: Safety of single low-dose primaquine in glucose-6-phosphate dehydrogenase deficient falciparum-infected African males: two open-label, randomized, safety trials. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.230ps

Bousema, T, Stresman, G, Baidjoe, AY, Bradley, J, Knight, P, Stone, W, Osoti, V, Makori, E, Owaga, C, Odongo, W, China, P, Shagari, S, Doumbo, OK, Sauerwein, RW, Kariuki, S, Drakeley, C, Stevenson, J and Cox, J (2017). Data from: The impact of hotspot-targeted interventions on malaria transmission in Rachuonyo south district in the western Kenyan highlands: a cluster-randomized controlled trial. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.nr8d8

Bowyer, P, Simon, GM, Cravatt, BF and Bogyo, M (2010). Global Profiling of Proteolysis during Rupture of Plasmodium falciparum from the Host Erythrocyte. [Data Collection]. Molecular & Cellular Proteomics. https://doi.org/10.1074/mcp.M110.001636

Churcher, TS, Bousema, T, Walker, M, Drakeley, C, Schneider, P, Ouédraogo, AL and Basáñez, M (2013). Data from: Predicting mosquito infection from Plasmodium falciparum gametocyte density and estimating the reservoir of infection. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.0k402

Claessens, A, Ghumra, A, Gupta, AP, Mok, S, Bozdech, Z and Rowe, JA (2011). Design of a variant surface antigen-supplemented microarray chip for whole transcriptome analysis of multiple Plasmodium falciparum cytoadherent strains, and identification of strain-transcendent rif and stevor genes: Additional files. [Data Collection]. Malaria Journal. http://doi.org/10.1186/1475-2875-10-180

Claessens, A, Hamilton, WL, Kekre, M, Otto, TD, Faizullabhoy, A, Rayner, JC and Kwiatkowski, D (2014). Generation of Antigenic Diversity in Plasmodium falciparum by Structured Rearrangement of Var Genes During Mitosis. [Data Collection]. PLOS Genetics. https://doi.org/10.1371/journal.pmed.1001893p://dx.doi.org/10.1371/journal.pmed.1001893

Early, AM, Lievens, M, MacInnis, BL, Ockenhouse, CF, Volkman, SK, Adjei, S, Agbenyega, T, Ansong, D, Gondi, S, Greenwood, B, Hamel, M, Odero, C, Otieno, K, Otieno, W, Owusu-agyei, S, Asante, KP, Sorgho, H, Tina, L, Tinto, H, Valea, I, Wirth, DF and Neafsey, DE (2018). Electronic Supplementary Material for: "Host-mediated selection impacts the diversity of Plasmodium falciparum antigens within infections". [Data Collection]. Nature Communications. https://doi.org/10.1038/s41467-018-03807-7

Flueck, C, Drought, LG, Jones, A, Patel, A, Perrin, AJ, Walker, EM, Nofal, SD, Snijders, AP, Blackman, MJ and Baker, DA (2019). Phosphodiesterase beta is the master regulator of cAMP signalling during malaria parasite invasion. [Data Collection]. PLOS Biology. https://doi.org/10.1371/journal.pbio.3000154

Halliday, K, Witek-mcmanus, S, Opondo, C, Mtali, A, Allen, E, Bauleni, A, Ndau, S, Phondiwa, E, Ali, D, Kachigunda, V, Sande, J, Verney, A, Chimuna, T, Melody, D, Moestue, H, Roschnik, N, Brooker, S and Mathanga, D (2017). Learner Treatment Kit (school-based malaria diagnosis and treatment in southern Malawi): Study data and support materials. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.203.

Ling, DB, Nguyen, W, Looker, O, Razook, Z, McCann, K, Barry, AE, Scheurer, C, Wittlin, S, Famodimu, MT, Delves, MJ, Bullen, HE, Crabb, BS, Sleebs, BE and Gilson, PR (2023). A Pyridyl-Furan Series Developed from the Open Global Health Library Block Red Blood Cell Invasion and Protein Trafficking in Plasmodium falciparum through Potential Inhibition of the Parasite’s PI4KIIIB Enzyme. [Data Collection]. ACS Publications. https://doi.org/10.1021/acsinfecdis.3c00138.s001

London School of Hygiene & Tropical Medicine (2022). CDC50 interacting partners of Plasmodium falcipraum. [Data Collection]. PRIDE: PRoteomic IDEntifications Database. https://www.ebi.ac.uk/pride/archive/projects/PXD033834

London School of Hygiene & Tropical Medicine (2023). Plasmodium falciparum isolates from Mali collected in 2019-2020. [Data Collection]. NCBI Bioproject. https://www.ncbi.xyz/bioproject/944050

London School of Hygiene & Tropical Medicine (2024). Targeted sequencing of Plasmodium falciparum isolates from human blood and infected mosquitoes from Mali. [Data Collection]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB73503

Murray, L (2017). Data for: "Investigations into the within-host genomic diversity and phenotypic variation of Plasmodium falciparum". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.202.

Mwakalinga, VM, Sartorius, BKD, Limwagu, AJ, Mlacha, YP, Msellemu, DF, Chaki, PP, Govella, NJ, Coetzee, M, Dongus, S and Killeen, GF (2018). Data from: Topographic mapping of the interfaces between human and aquatic mosquito habitats to enable barrier-targeting of interventions against malaria vectors. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.77vq6gs

Omendo, I, Mogeni, P, Bousema, T, Rockett, KA, Amambua-Ngwa, A, Oyier, I, Stevenson, JC, Baidjoe, A, de Villiers, EP, Fegan, G, Ross, A, Hubbart, C, Jeffreys, A, Williams, TN, Kwiatkowski, D and Bejon, P (2017). Micro-epidemiological structuring of Plasmodium falciparum parasite populations in regions with varying transmission intensities in Africa. [Data Collection]. Wellcome Open Research. http://doi.org/10.12688/wellcomeopenres.10784.2

Ouédraogo, AL, Bousema, T, Schneider, P, de Vlas, SJ, Ilboudo-Sanogo, E, Cuzin-Ouattara, N, Nébié, I, Roeffen, W, Verhave, JP, Luty, AJF and Sauerwein, R (2013). Data from: Substantial contribution of submicroscopical Plasmodium falciparum gametocyte carriage to the infectious reservoir in an area of seasonal transmission. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.hv01f

Patel, A, Nofal, SD, Blackman, MJ and Baker, DA (2022). Supplementary information, CDC50 orthologues in Plasmodium falciparum have distinct roles in merozoite egress and trophozoite maturation. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.6619340

Paton, RS, Kamau, A, Akech, S, Agweyu, A, Ogero, M, Mwandawiro, C, Mturi, N, Mohammed, S, Mpimbaza, A, Kariuki, S, Otieno, NA, Nyawanda, BO, Mohamed, AF, Mtove, G, Reyburn, H and Gupta, S (2021). Replication Data for: Malaria infection and severe disease risks in Africa. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/XGDB3K

Raghavan, M, Kalantar, K, Duarte, E, Teyssier, N, Takahashi, S, Kung, A, Rajan, JU, Rek, J, Tetteh, KKA, Drakeley, C, Ssewanyana, I, Rodriguez-Barraquer, I, Greenhouse, B and DeRisi, J (2023). Proteome-wide antigenic profiling in Ugandan cohorts identifies associations between age, exposure intensity, and responses to repeat-containing antigens in Plasmodium falciparum. [Data Collection]. Dryad. https://doi.org/10.7272/Q69S1P9G

Reuling, IJ, van de Schans, LA, Coffeng, LE, Lanke, K, Meerstein-Kessel, L, Graumans, W, van Gemert, G, Teelen, K, Siebelink-Stoter, R, van de Vegte-Bolmer, M, de Mast, Q, van der Ven, AJ, Ivinson, K, Hermsen, CC, de Vlas, S, Bradley, J, Collins, KA, Ockenhouse, CF, McCarthy, J, Sauerwein, RW and Bousema, T (2018). Data from: A randomized feasibility trial comparing four antimalarial drug regimens to induce Plasmodium falciparum gametocytemia in the controlled human malaria infection model. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.60h41

Schneider, P, Bousema, T, Gouagna, LC, Otieno, S, van de Vegte-Bolmer, M, Omar, SA and Sauerwein, RW (2013). Data from: Submicroscopic Plasmodium falciparum gametocyte densities frequently result in mosquito infection. [Data Collection]. Dryad. https://doi.org/10.5061/dryad.589ft

Simões, ML, Dong, Y, Mlambo, G and Dimopoulos, G (2022). C-type lectin 4 regulates broad-spectrum melanization-based refractoriness to malaria parasites. The underlying data for all graphs. [Data Collection]. PLOS Biology. https://doi.org/10.1371/journal.pbio.3001515.s012

Smargiasso, N, Gabelica, V, Damblon, C, Rosu, F, De Pauw, E, Teulade-Fichou, M, Rowe, A and Claessens, A (2009). Putative DNA G-quadruplex formation within the promoters of Plasmodium falciparum var genes: Supplementary data. [Data Collection]. BMC Genomics. https://doi.org/10.1186/1471-2164-10-362

Sutherland, C and Henrici, R (2020). The Plasmodium falciparum artemisinin susceptibility-associated AP-2 adaptin mu subunit is clathrin-independent and essential for schizont-maturation v2.0. [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00001533.

Tarr, SJ and Conway, DJ (2018). Diversity in gene expression profiles captured through highly resolved whole-transcriptome profiling of clinical and laboratory-adapted malaria parasite isolates. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE113718

Wu, L, van den Hoogen, LL, Slater, H, Walker, PGT, Ghani, AC, Drakeley, CJ and Okell, LC (2015). Comparison of diagnostics for the detection of asymptomatic Plasmodium falciparum infections to inform control and elimination strategies. [Data Collection]. Nature. https://doi.org/10.1136/jech-2018-211746