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Gomes, MC, Brokatzky, D, Bielecka, MK, Wardle, FC and Mostowy, S (2023). Shigella induces epigenetic reprogramming of zebrafish neutrophils. [Data Collection]. NCBI Gene Expression Omnibus. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE217063
London School of Hygiene & Tropical Medicine (2019). Dual RNA-seq of zebrafish larvae infected with Shigella sonnei. [Data Collection]. NIH National Library of Medicine. https://www.ncbi.nlm.nih.gov/bioproject/PRJNA590152
Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). Gene ontology (GO) enrichment analysis results for significantly upregulated genes at all time points. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s003
Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). KEGG and gene ontology (GO) enrichment analyses for significantly differentially expressed genes between low and high PET score groups for the terms and pathways identified in the main analyses. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s005
Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). KEGG pathway enrichment analysis results for significantly differentially expressed genes at all time points. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s004
Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). List of differentially expressed genes at all time points. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s002
Meier, S, Seddon, JA, Maasdorp, E, Kleynhans, L, du Plessis, N, Loxton, AG, Malherbe, ST, Zak, DE, Thompson, E, Duffy, FJ, Kaufmann, SHE, Ottenhoff, THM, Scriba, TJ, Suliman, S, Sutherland, JS, Winter, J, Kuivaniemi, H, Walzl, G and Tromp, G (2022). PET scores for the catalysis study specimens. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278295.s001
Torraca, V, Kaforou, M, Watson, J, Duggan, GM, Guerrero-Gutierrez, H, Krokowski, S, Hollinshead, M, Clarke, TB, Mostowy, RJ, Tomlinson, GS, Sancho-Shimizu, V, Clements, A and Mostowy, S (2019). Shigella sonnei infection of zebrafish reveals that O-antigen mediates neutrophil tolerance and dysentery incidence. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1008006.s007
Wright, K, de Silva, K, Plain, KM, Purdie, AC, Blair, TA, Duggin, IG, Britton, WJ and Oehlers, SH (2021). Source data for graphs. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1009186.s008
Wright, K, de Silva, K, Plain, KM, Purdie, AC, Blair, TA, Duggin, IG, Britton, WJ and Oehlers, SH (2021). miR-206 target prediction results from TargetScan analysis. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1009186.s007