Item Type Date Title No Grouping

superspreading: Understand Individual-Level Variation in Infectious Disease Transmission. (2025) Lambert, Joshua W.; Kucharski, Adam J.; Adam, Dillon C.; Funk, Sebastian; Gupte, Pratik; Gruson, Hugo; Azam, James M.; Hartgerink, Chris

simulist: Simulate Disease Outbreak Line List and Contacts Data. (2025) Lambert, Joshua W.; Tamayo, Carmen; Gruson, Hugo; Gupte, Pratik R.; Kucharski, Adam J.; Hartgerink, Chris; Funk, Sebastian

joshwlambert/DAISIEprepExtra. (2024) Lambert, Joshua W.

epiparameterDB: Database of Epidemiological Parameters. (2024) Lambert, Joshua W.; Kucharski, Adam J.; Tamayo, Carmen

epichains: Simulating and Analysing Transmission Chain Statistics Using Branching Process Models. (2024) Azam, James M.; Funk, Sebastian; Finger, Flavio; Kamvar, Zhian N.; Gruson, Hugo; Mané, Karim; Gupte, Pratik; Lambert, Joshua W.

DAISIEmainland. (2024) Lambert, Joshua W.; Bilderbeek, Richèl; Santos Neves, Pedro

cleanepi: Clean and Standardize Epidemiological Data. (2024) Mané, Karim; Jombart, Thibaut; Bah, Bubacarr; Ahadzie, Bankolé; Mohammed, Nuredin; Degoot, Abdoelnaser M.; Gruson, Hugo; Gupte, Pratik R.; Azam, James M.; Lambert, Joshua W.; Hartgerink, Chris

cfr: Estimate Disease Severity and Case Ascertainment. (2024) Gupte, Pratik R.; Kucharski, Adam J.; Russell, Timothy W.; Lambert, Joshua W.; Gruson, Hugo; Taylor, Tim; Azam, James M.; Degoot, Abdoelnaser M.; Funk, Sebastian

numberize: Convert Words to Numbers in Multiple Languages. (2024) Hartgerink, Chris; Lambert, Joshua W.; Mané, Karim; Gruson, Hugo; Ahadzie, Bankole

finalsize: Calculate the Final Size of an Epidemic. (2024) Gupte, Pratik; Van Leeuwen, Edwin; Kucharski, Adam; Eggo, Rosalind M.; Gruson, Hugo; Jombart, Thibaut; Valle Campos, Andree; Lambert, Joshua W.

epiverse-trace/simulist. (2024) Lambert, Joshua; Gruson, Hugo; Kucharski, Adam J.; Tamayo Cuartero, Carmen

rsetienne/DAISIE. (2023) Neves, Pedro Santos; Lambert, Joshua W.; Etienne, Rampal S.; Bilderbeek, Richel; Xie, Shu; Valente, Luis; Hildenbrandt, H; Scherrer, Raphaël; Yangshen0325

DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction. (2023) Etienne, Rampal S.; Valente, Luis; Phillimore, Albert B.; Haegeman, Bart; Lambert, Joshua W.; Santos Neves, Pedro; Xie, Shu; Bilderbeek, Richèl J.C.; Hildenbrandt, Hanno; Hauffe, Torsten; Laudanno, Giovanni; Kristensen, Nadiah; Scherrer, Raphael

epiverse-trace/epiparameter. (2023) Lambert, Joshua; Gruson, Hugo; Kucharski, Adam J.; Gupte, Pratik; Salmon, Maëlle; Campos, Andree Valle; Monticone, Pietro

epiverse-trace. (2023) Pavlich-Mariscal, Jaime; Eggo, Rosalind M.; Kucharski, Adam J.; Gruson, Hugo; Russell, Timothy W.; Valle Campos, Andree; Cucunubá, Zulma M.; Santos-Vega, Mauricio; Gupte, Pratik; Azam, James; Torres Domínguez, Nicolás; Lambert, Joshua; Gomez, Geraldine; Umaña, Juan D.; Quevedo-Vega, David Santiago; Gámez López, Miguel Enrique; Carnegie, Anna