Data Collection

Shanaube, K, Gachie, T, Hoddinott, G, Schaap, A, Floyd, S, Mainga, T, Bond, V, Hayes, R, Fidler, S and Ayles, H (2022). Depressive symptoms and HIV risk behaviours among adolescents enrolled in the HPTN071 (PopART) trial in Zambia and South Africa. Aggregate dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0278291.s012

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). 99% credible set SNPs for leprosy association at chromosome 10q24. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s016

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Analysis of pleiotropy at the leprosy association at chromosome 10q24. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s018

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Association statistics for imputed classical HLA alleles and leprosy risk in Malawi and Mali. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s022

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Chromatin state at chromosome 10q24. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s020

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Genome-wide association study of leprosy in Malawi and Mali. S2 Table. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s015

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Regulatory function at the chromosome 10q24 leprosy association. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s021

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s023

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali stratified by multibacillary and paucibacillary disease. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s024

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). SNP quality control summary in Malawi and Mali. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s026

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Sample quality control summary in Malawi and Mali. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s025

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Selection signatures at chromosome 10q24. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s019

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Study populations and leprosy association statistics at rs2015583 in the Chinese replication analysis. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s017

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2022). Summary characteristics of AGYW by schooling status at baseline and by invitation to DREAMS. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0255165.s010

Gilchrist, JJ, Auckland, K, Parks, T, Mentzer, AJ, Goldblatt, L, Naranbhai, V, Band, G, Rockett, KA, Toure, OB, Konate, S, Sissoko, S, Djimdé, AA, Thera, MA, Doumbo, OK, Sow, S, Floyd, S, Pönnighaus, JM, Warndorff, DK, Crampin, AC, Fine, PEM, Fairfax, BP and Hill, AVS (2022). Leprosy association statistics for suggestive associations in Malawi. S1 Table. [Data Collection]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s014

Orindi, BO, Ziraba, A, Bruyneel, L, Floyd, S and Lesaffre, E (2021). Invariance of the WHO violence against women instrument among Kenyan adolescent girls and young women: Bayesian psychometric modeling. S1 Dataset. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0258651.s007

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Impact of the DREAMS interventions on educational attainment among adolescent girls and young women: Causal analysis of a prospective cohort in urban Kenya. Analytical datasets. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0255165.s012

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Number and proportions of AGYW aged 15–22 years retained in the study vs those lost to follow up at endline (2019), by AGYW characteristics. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0255165.s008

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Number of interventions accessed by age group, schooling status at baseline, and invitation to DREAMS. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0255165.s009

Mulwa, S, Chimoyi, L, Agbla, S, Osindo, J, Wambiya, EO, Gourlay, A, Birdthistle, I, Ziraba, A and Floyd, S (2021). Results from sensitivity analysis for associations between DREAMS and educational attainment. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0255165.s011

Hensen, B, Ayles, H, Mulubwa, C, Floyd, S, Schaap, A, Chiti, B, Phiri, M, Mwenge, L, Simwinga, M, Fidler, S, Hayes, R, Bond, V and Mwinga, A (2019). Community-based distribution of oral HIV self-testing kits: experimental evidence from Zambia. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/NGY29G

Gourlay, A, Birdthistle, I, Mthiyane, NT, Orindi, BO, Muuo, S, Kwaro, D, Shahmanesh, M, Baisley, K, Ziraba, A and Floyd, S (2019). Awareness and uptake of layered HIV prevention programming for young women: analysis of population-based surveys in three DREAMS settings in Kenya and South Africa. [Data Collection]. BMC Public Health. https://doi.org/10.1186/s12889-019-7766-1

Floyd, S, Schaap, A, Hensen, B and Mulubwa, C (2018). Dataset for: "Community based distribution of oral HIV self-testing kits in Zambia: a cluster-randomised trial nested in four HPTN 071 (PopART) intervention communities". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00000980.

Doyle, AM, Floyd, S, Baisley, K, Orindi, B, Kwaro, D, Mthiyane, TN, Muuo, S, Shahmanesh, M, Ziraba, A and Birdthistle, I (2018). Who are the male sexual partners of adolescent girls and young women? Comparative analysis of population data in three settings prior to DREAMS roll-out. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0198783

Floyd, S, Ayles, H, Schaap, A, Shanaube, K, MacLeod, D, Phiri, M, Griffith, S, Bock, P, Beyers, N, Fidler, S and Hayes, R (2018). Aggregate data for "Towards 90-90: Findings after two years of the HPTN 071 (PopART) cluster-randomized trial of a universal testing-and-treatment intervention in Zambia". [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0197904.s005

Zirba, A, Orindi, B, Muuo, S, Floyd, S, Birdthistle, IJ, Mumah, J, Osindo, J, Njoroge, P and Kabiru, CW (2018). Understanding HIV risks among adolescent girls and young women in informal settlements of Nairobi, Kenya: Lessons for DREAMS. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pone.0197479

Ziraba, A, Orindi, B, Muuo, S, Floyd, S, Birdthistle, IJ, Mumah, J, Osindo, J, Njoroge, P and Kabiru, CW (2018). Understanding HIV risks among adolescent girls and young women in informal settlements of Nairobi, Kenya: Lessons for DREAMS. S7 Table. [Data Collection]. PLOS ONE. https://doi.org/10.1371/journal.pone.0197479.s007

Hayes, R, Floyd, S, Schaap, A, Shanaube, K, Bock, P, Sabapathy, K, Griffith, S, Donnell, D, Piwowar-Manning, E, El-Sadr, W, Beyers, N, Ayles, H and Fidler, S (2017). A universal testing and treatment intervention to improve HIV control: One-year results from intervention communities in Zambia in the HPTN 071 (PopART) cluster-randomised trial. [Data Collection]. Figshare. https://doi.org/10.1371/journal.pmed.1002292.