Item Type Date No Grouping

Additional file 1 of Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data. (2024) Spadar, Anton, Phelan, Jody, Clark, Taane G., Campino, Susana

Additional file 3 of Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data. (2024) Spadar, Anton, Phelan, Jody E., Clark, Taane G., Campino, Susana

Additional file 2 of Large-scale genomic analysis of global Klebsiella pneumoniae plasmids reveals multiple simultaneous clusters of carbapenem-resistant hypervirulent strains. (2023) Spadar, Anton, Perdigão, João, Campino, Susana, Clark, Taane G.

A computational method for predicting the most likely evolutionary trajectories in the stepwise accumulation of resistance mutations. (2022) Eccleston, R. Charlotte, Manko, Emilia, Campino, Susana, Clark, Taane G., Furnham, Nicholas

Getting close to nature – Plasmodium knowlesi reference genome sequences from contemporary clinical isolates. (2021) Damilola R. Oresegun, Peter Thorpe, Benavente, Ernest, Campino, Susana, Fauzi Muh, Moon, Robert W., Clark, Taane, Cox-Singh, Janet

Data for: "Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus". (2021) Spadar, Anton, Phelan, Jody, Diez-Benavente, Ernest, Campos, Monica, Gomez, Lara Ferrero, Mohareb, Fady, Clark, Taane G., Campino, Susana

Study database for: "Adverse pregnancy outcomes are associated with Plasmodium vivax malaria in a prospective cohort of women from the Brazilian Amazon". (2021) Fuehrer, Hans-Peter, Dombrowski, Jamille Gregório, Barateiro, André, Peixoto, Erika Paula Machado, Barros, André Boler Cláudio da Silva, Souza, Rodrigo Medeiros de, Clark, Taane Gregory, Campino, Susana, Wrenger, Carsten, Wunderlich, Gerhard, Palmisano, Giuseppe, Epiphanio, Sabrina, Gonçalves, Lígia Antunes, Marinho, Claudio Romero Farias

Additional file 1: of Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs. (2019) Phelan, Jody, O’Sullivan, Denise M, Machado, Diana, Ramos, Jorge, Oppong, Yaa EA, Campino, Susana, O’Grady, Justin, McNerney, Ruth, Hibberd, Martin L, Viveiros, Miguel, Huggett, Jim F, Clark, Taane G.

Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. (2018) Sepúlveda, Nuno, Phelan, Jody, Diez-Benavente, Ernest, Campino, Susana, Clark, Taane G., Hopkins, Heidi, Sutherland, Colin, Drakeley, Chris J., Beshir, Khalid B.

Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations. (2017) Diez Benavente, Ernest, Florez de Sessions, Paola, Moon, Robert W., Holder, Anthony A., Blackman, Michael J., Roper, Cally, Drakeley, Christopher J., Pain, Arnab, Sutherland, Colin J., Hibberd, Martin L., Campino, Susana, Clark, Taane G.

Whole genome sequences for M.tuberculosis isolates from the TDR strain bank. (2015) Phelan, Jody, Coll, Francesc, Mcnerney, Ruth, Ascher, David B., Pires, Douglas E. V., Furnham, Nick, Coeck, Nele, Hill-Cawthorne, Grant A., Nair, Mridul B., Mallard, Kim, Ramsay, Andrew, Campino, Susana, Hibberd, Martin, Pain, Arnab, Rigouts, Leen, Clark, Taane description

PhyloTrack. (2015) Benavente, Ernest, Coll, Francesc, Furnham, Nick, Mcnerney, Ruth, Glynn, Judith, Campino, Susana, Pain, Arnab, Mohareb, Fady R, Clark, Taane