Data from: Biased estimates of phylogenetic branch lengths resulting from the discretised Gamma model of site rate heterogeneity

Ferretti, L

; Golubchik, T

; Di Lauro, F; Ghafari, M; Villabona-Arenas, , Julian; Atkins, KE

; Fraser, C

and Hall, M

(2026). Data from: Biased estimates of phylogenetic branch lengths resulting from the discretised Gamma model of site rate heterogeneity. [Dataset]. Dryad. https://doi.org/10.5061/dryad.d51c5b0fh

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Simulated data underlying the analyses in the paper 'Biased estimates of phylogenetic branch lengths resulting from the discretised Gamma model of site rate heterogeneity' and PANGEA-HIV IDs for real sequences used.

Keywords

Evolutionary rate; Mathematical and statistical techniques; Phylogenetics; Biological sciences

Item Type	Dataset
Resource Type	Resource Type Resource Description Dataset Quantitative
Capture method	Simulation
Date	27 May 2026
Language(s) of written materials	English
Creator(s)	Ferretti, L; Golubchik, T; Di Lauro, F; Ghafari, M; Villabona-Arenas, , Julian; Atkins, KE ; Fraser, C and Hall, M
LSHTM Faculty/Department	Academic Services & Administration > Directorate
Research Centre	Centre for the Mathematical Modelling of Infectious Diseases
Participating Institutions	University of Oxford, Oxford, United Kingdom; University of Sydney, Sydney, Australia; London School of Hygiene & Tropical Medicine, London, United Kingdom; University of Edinburgh, Edinburgh, Scotland
Funders	Project Funder Grant Number Funder URI UNSPECIFIED Bill and Melinda Gates Foundation OPP1175094 https://doi.org/10.13039/100000865 UNSPECIFIED Bill and Melinda Gates Foundation OPP108436 https://doi.org/10.13039/100000865 UNSPECIFIED Li Ka Shing Foundation UNSPECIFIED https://doi.org/10.13039/100007421 UNSPECIFIED Wellcome Trust 203141/Z/16/Z https://doi.org/10.13039/100010269 UNSPECIFIED Wellcome Trust 206298/Z/17/Z https://doi.org/10.13039/100010269 UNSPECIFIED Wellcome Trust 309205/Z/24/Z https://doi.org/10.13039/100010269 UNSPECIFIED European Research Council 757688 https://doi.org/10.13039/501100000781 UNSPECIFIED UK Research and Innovation EP/Y037375/1 https://doi.org/10.13039/100014013 UNSPECIFIED European Commission 101131463 https://doi.org/10.13039/501100000780 UNSPECIFIED National Health and Medical Research Council GNT2025445 https://doi.org/10.13039/501100000925
Date Deposited	28 May 2026 08:40
Last Modified	29 May 2026 12:04
Publisher	Dryad

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Biased estimates of phylogenetic branch lengths resulting from the discretised Gamma model of site rate heterogeneity.

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Centre for the Mathematical Modelling of Infectious Diseases

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