Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae
Foster-Nyarko, E
, Holt, KE, Cottingham, H, Wick, R, Judd, LM, Lam, M, Wyres, KL, Stanton, T, Tsang, KK, David, S, Bridel, S, Palma, F, Aanensen, DM and Brisse, S
(2023).
Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae.
[Dataset].
Figshare.
https://doi.org/10.6084/m9.figshare.19745608.v2
, Holt, KE, Cottingham, H, Wick, R, Judd, LM, Lam, M, Wyres, KL, Stanton, T, Tsang, KK, David, S, Bridel, S, Palma, F, Aanensen, DM and Brisse, S
(2023).
Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae.
[Dataset].
Figshare.
https://doi.org/10.6084/m9.figshare.19745608.v2
Study typing table produced by Kleborate and study SNP matrix produced by Pathogenwatch.
Keywords
Klebsiella pneumoniae; Oxford Nanopore Sequencing; Bioinformatics; Genomics| Item Type | Dataset |
|---|---|
| Resource Type |
Resource Type Resource Description Dataset Quantitative |
| Capture method | Experiment |
| Collection Period |
From To 2003 2010 |
| Date | 13 March 2023 |
| Language(s) of written materials | English |
| Creator(s) |
Foster-Nyarko, E, Holt, KE, Cottingham, H, Wick, R, Judd, LM, Lam, M, Wyres, KL, Stanton, T, Tsang, KK, David, S, Bridel, S, Palma, F, Aanensen, DM and Brisse, S
|
| LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Department of Infection Biology |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Funders |
Project Funder Grant Number Funder URI |
| Date Deposited | 30 Jun 2023 09:08 |
| Last Modified | 17 Oct 2023 09:45 |
| Publisher | Figshare |
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