S. stercoralis genes (n = 328) differentially expressed in gut-dwelling (dark blue) versus non-gut-dwelling (light blue) life stages of the nematode with those containing predicted epitopes indicated
Marlais, T
, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA
(2023).
S. stercoralis genes (n = 328) differentially expressed in gut-dwelling (dark blue) versus non-gut-dwelling (light blue) life stages of the nematode with those containing predicted epitopes indicated.
[Dataset].
PLOS Neglected Tropical Diseases.
https://doi.org/10.1371/journal.pntd.0010777.s002
, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA
(2023).
S. stercoralis genes (n = 328) differentially expressed in gut-dwelling (dark blue) versus non-gut-dwelling (light blue) life stages of the nematode with those containing predicted epitopes indicated.
[Dataset].
PLOS Neglected Tropical Diseases.
https://doi.org/10.1371/journal.pntd.0010777.s002
Transcriptomic data from Stoltzfus et al. (2012), gut and non-gut groupings and differential analysis from the present study. Gene accession numbers (starting SSTP) are given for WormBase ParaSite or UniProtKB and life stage transcriptomic data accession numbers (starting ERR) for NCBI SRA. Expression levels are in normalized read counts where red is high and white is low.
Keywords
Strongyloides stercoralis, Strongyloides, Proteomes, Parasitic diseases, Helminths, Proteomic databases, Protein expression, Transcriptome analysis| Item Type | Dataset |
|---|---|
| Capture method | Experiment |
| Date | 17 April 2023 |
| Language(s) of written materials | English |
| Creator(s) |
Marlais, T, Bickford-Smith, J, Talavera-López, C, Le, H, Chowdhury, F and Miles, MA
|
| LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Dept of Clinical Research |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom, Institute of Computational Biology, Computational Health Centre, Helmholtz Munich, Neuherberg, Germany |
| Date Deposited | 16 May 2023 10:34 |
| Last Modified | 16 May 2023 11:03 |
| Publisher | PLOS Neglected Tropical Diseases |
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