Item Type Date No Grouping

Dataset

Data and code from "The overlapping global distribution of dengue, chikungunya, Zika and yellow fever". (2025) Lim, Ahyoung, Brady, Oliver J.

Dynamics of SARS-CoV-2 infection over two epidemic waves in Manaus, Brazil: a serological study of seven thousand blood donors. (2024) Alexander, Neal, Dye, Christopher, Busch, Michael P., Buss, Lewis, Prete Jr, Carlos A., Brady, Oliver J., Mee, Paul, Abrahim, Claudia M. M., Crispim, Myuki A. E., da Costa, Allyson G., Salomon, Tassila, Mayaud, Philippe, Oikawa, Márcio K., Faria, Nuno, Sabino, Ester C.

S1 Table for "Assessing vulnerability for future Zika virus outbreaks using seroprevalence data and environmental suitability maps". (2024) Roell, Yannik, Pezzi, Laura, Lozano-Parra, Anyela, Olson, Daniel, Messina, Jane, Quandelacy, Talia, Drexler, Jan Felix, Brady, Oliver, Karimzadeh, Morteza, Jaenisch, Thomas

OpenDengue/master-repo. (2024) Lim, Ahyoung, Brady, Oliver J

obrady/CATI_Vietnam. (2024) Brady, Oliver J.

Dengue virus type 4 isolate DET-P-0428-1 polyprotein (POLY) gene, complete cds; and sfRNA2 lncRNA gene, partial sequence. (2023) Ashall, James, Shah, Sonal, Biggs, Joseph R, Chang, Jui-Ning R, Jafari, Yalda, Brady, Oliver J., Mai, Huynh Kim, Lien, Le Thuy, Do Thai, Hung, Nguyen, Hien Anh Thi, Anh, Dang Duc, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Yoshida, Lay-Myint, Hafalla, Julius Clemence R, Hue, Stephane, Hibberd, Martin L.

Dengue virus type I isolate DEN-P-1098-1 polyprotein (POLY) gene, partial cds. (2023) Ashall, James, Shah, Sonal, Biggs, Joseph R, Chang, Jui-Ning R, Jafari, Yalda, Brady, Oliver J., Mai, Huynh Kim, Lien, Le Thuy, Do Thai, Hung, Nguyen, Hien Anh Thi, Anh, Dang Duc, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Yoshida, Lay-Myint, Hafalla, Julius Clemence R, Hue, Stephane, Hibberd, Martin L.

Projecting the future incidence and burden of dengue in Southeast Asia. (2022) Colón-González, Felipe De Jesus, Gibb, Rory, Khan, Kamran, Watts, Alexander, Lowe, Rachel, Brady, Oliver J.

Demographic characteristics of the reporting study population at enrolment. (2022) Biggs, Joseph, Sy, Ava Kristy, Ashall, James, Santoso, Marsha S, Brady, Oliver J, Reyes, Mary Anne Joy, Quinones, Mary Ann, Jones-Warner, William, Tandoc, Amadou O, Sucaldito, Nemia L, Huynh, Kim Mai, Le, Thuy Lien, Hung, Do Thai, Nguyen, Hien Anh Thi, Dang, Duc Anh, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Menten, Joris, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Masyeni, Sri, Haryanto, Sotianingsih, Yohan, Benediktus, Cutiongco-de la Paz, Eva, Yoshida, Lay-Myint, Hue, Stephane, Capeding, Maria Rosario Z, Padilla, Carmencita D, Sasmono, R Tedjo, Hafalla, Julius Clemence R, Hibberd, Martin L

Sensitivity (95%CI) of NS1 RDTs in capturing DENV1-4 infections stratified by immune status among patients from Vietnam (N:1,217). (2022) Biggs, Joseph, Sy, Ava Kristy, Ashall, James, Santoso, Marsha S, Brady, Oliver J, Reyes, Mary Anne Joy, Quinones, Mary Ann, Jones-Warner, William, Tandoc, Amadou O, Sucaldito, Nemia L, Huynh, Kim Mai, Le, Thuy Lien, Hung, Do Thai, Nguyen, Hien Anh Thi, Dang, Duc Anh, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Menten, Joris, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Masyeni, Sri, Haryanto, Sotianingsih, Yohan, Benediktus, Cutiongco-de la Paz, Eva, Yoshida, Lay-Myint, Hue, Stephane, Capeding, Maria Rosario Z, Padilla, Carmencita D, Sasmono, R Tedjo, Hafalla, Julius Clemence R, Hibberd, Martin L

A summary of data collected from suspected dengue patients included in the study population from Indonesia, Vietnam and the Philippines. (2022) Biggs, Joseph R, Sy, Ava Kristy, Ashall, James, Santoso, Marsha S, Brady, Oliver J, Reyes, Mary Anne Joy, Quinones, Mary Ann, Jones-Warner, William, Tandoc, Amadou O, Sucaldito, Nemia L, Huynh, Kim Mai, Le, Thuy Lien, Hung, Do Thai, Nguyen, Hien Anh Thi, Dang, Duc Anh, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Menten, Joris, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Masyeni, Sri, Haryanto, Sotianingsih, Yohan, Benediktus, Cutiongco-de la Paz, Eva, Yoshida, Lay-Myint, Hue, Stephane, Capeding, Maria Rosario Z, Padilla, Carmencita D, Sasmono, R Tedjo, Hafalla, Julius Clemence R, Hibberd, Martin L

R code for the paper "Probabilistic seasonal dengue forecasting in Vietnam: A modelling study using superensembles". (2021) Colón-González, Felipe J., Soares Bastos, Leonardo, Hofmann, Barbara, Hopkin, Alison, Harpham, Quillon, Crocker, Tom, Amato, Rosanna, Ferrario, Iacopo, Moschini, Francesca, James, Samuel, Malde, Sajni, Ainscoe, Eleanor, Sinh Nam, Vu, Quang Tan, Dang, Duc Khoa, Nguyen, Harrison, Mark, Tsarouchi, Gina, Lumbroso, Darren, Brady, Oliver J., Lowe, Rachel

Data from: Evolution and epidemic spread of SARS-CoV-2 in Brazil. (2020) Candido, Darlan S., Claro, Ingra M., de Jesus, Jaqueline G., Souza, William M., Moreira, Filipe R. R., Dellicour, Simon, Mellan, Thomas A., du Plessis, Louis, Pereira, Rafael H. M., Sales, Flavia C. S., Manuli, Erika R., Thézé, Julien, Almeida, Luiz, Menezes, Mariane T., Voloch, Carolina M., Fumagalli, Marcilio J., Coletti, Thaís M., da Silva, Camila A. M., Ramundo, Mariana S., Amorim, Mariene R., Hoeltgebaum, Henrique H., Mishra, Swapnil, Gill, Mandev S., Carvalho, Luiz M., Buss, Lewis F., Prete, Carlos A., Ashworth, Jordan, Nakaya, Helder I., Peixoto, Pedro S., Brady, Oliver J., Nicholls, Samuel M., Tanuri, Amilcar, Rossi, Átila D., Braga, Carlos K.V., Gerber, Alexandra L., de C. Guimarães, Ana Paula, Gaburo, Nelson, Alencar, Cecila Salete, Ferreira, Alessandro C.S., Lima, Cristiano X., Levi, José Eduardo, Granato, Celso, Ferreira, Giulia M., Francisco, Ronaldo S., Granja, Fabiana, Garcia, Marcia T., Moretti, Maria Luiza, Perroud, Mauricio W., Castiñeiras, Terezinha M. P. P., Lazari, Carolina S., Hill, Sarah C., de Souza Santos, Andreza Aruska, Simeoni, Camila L., Forato, Julia, Sposito, Andrei C., Schreiber, Angelica Z., Santos, Magnun N. N., de Sá, Camila Zolini, Souza, Renan P., Resende-Moreira, Luciana C., Teixeira, Mauro M., Hubner, Josy, Leme, Patricia A. F., Moreira, Rennan G, Nogueira, Maurício L., Ferguson, Neil M, Costa, Silvia F., Proenca-Modena, José Luiz, Vasconcelos, Ana Tereza R., Bhatt, Samir, Lemey, Philippe, Wu, Chieh-Hsi, Rambaut, Andrew, Loman, Nick J., Aguiar, Renato S., Pybus, Oliver G., Sabino, Ester C., Faria, Nuno Rodrigues

Evolution and epidemic spread of SARS-CoV-2 in Brazil. (2020) Candido, Darlan S., Claro, Ingra M., de Jesus, Jaqueline G., Souza, William M., Moreira, Filipe R. R., Dellicour, Simon, Mellan, Thomas A., du Plessis, Louis, Pereira, Rafael H. M., Sales, Flavia C. S., Manuli, Erika R., Thézé, Julien, Almeida, Luiz, Menezes, Mariane T., Voloch, Carolina M., Fumagalli, Marcilio J., Coletti, Thaís M., da Silva, Camila A. M., Ramundo, Mariana S., Amorim, Mariene R., Hoeltgebaum, Henrique H., Mishra, Swapnil, Gill, Mandev S., Carvalho, Luiz M., Buss, Lewis F., Prete, Carlos A., Ashworth, Jordan, Nakaya, Helder I., Peixoto, Pedro S., Brady, Oliver J., Nicholls, Samuel M., Tanuri, Amilcar, Rossi, Átila D., Braga, Carlos K.V., Gerber, Alexandra L., de C. Guimarães, Ana Paula, Gaburo, Nelson, Alencar, Cecila Salete, Ferreira, Alessandro C.S., Lima, Cristiano X., Levi, José Eduardo, Granato, Celso, Ferreira, Giulia M., Francisco, Ronaldo S., Granja, Fabiana, Garcia, Marcia T., Moretti, Maria Luiza, Perroud, Mauricio W., Castiñeiras, Terezinha M. P. P., Lazari, Carolina S., Hill, Sarah C., de Souza Santos, Andreza Aruska, Simeoni, Camila L., Forato, Julia, Sposito, Andrei C., Schreiber, Angelica Z., Santos, Magnun N. N., de Sá, Camila Zolini, Souza, Renan P., Resende-Moreira, Luciana C., Teixeira, Mauro M., Hubner, Josy, Leme, Patricia A. F., Moreira, Rennan G, Nogueira, Maurício L., Ferguson, Neil M, Costa, Silvia F., Proenca-Modena, José Luiz, Vasconcelos, Ana Tereza R., Bhatt, Samir, Lemey, Philippe, Wu, Chieh-Hsi, Rambaut, Andrew, Loman, Nick J., Aguiar, Renato S., Pybus, Oliver G., Sabino, Ester C., Faria, Nuno Rodrigues

Code for simulating release of Wolbachia mosquitoes in Indonesia and assessing their cost effectiveness in different places over time. (2019) Brady, Oliver J., Bastos, Leonardo

obrady/Wolbachia_CE. (2019) Brady, Oliver J., Bastos, Leonardo

Data and code from: Estimating the burden of dengue and the impact of release of wMel Wolbachia infected mosquitoes in Indonesia: a modelling study. (2019) O'reilly, Kathleen, Hendrickx, Emilie, Kharisma, Dinar D., Wilastonegoro, Nandyan N., Carrington, Lauren B., Elyazar, Iqbal R. F., Kucharsk, Adam J., Lowe, Rachel, Flasche, Stefan, Pigott, David M., Reiner Jr, Robert C., Edmunds, John, Hay, Simon I., Yakob, Laith, Shepard, Donald S., Brady, Oliver

The current and future global distribution and population at risk of dengue. (2019) Messina, Jane P, Brady, Oliver J, Golding, Nick, Kraemer, Moritz UG, Wint, G R William, Ray, Sarah E, Pigott, David M, Shearer, Freya M, Johnson, Kimberly, Earl, Lucas, Marczak, Laurie B, Shirude, Shreya, Davis Weaver, Nicole, Gilbert, Marius, Velayudhan, Raman, Jones, Peter, Jaenisch, Thomas, Scott, Thomas W, Reiner Jr, Robert C, Hay, Simon I

obrady/Brazil_microcepahly_analysis_public. (2018) Brady, Oliver J.

Microcephaly and potential exposure data in Brazil 2015-2017. (2018) Brady, Oliver J.

adamkucharski/fiji-denv3-2014. (2018) Kucharski, Adam J, Kama, Mike, Watson, Conall H, Aubry, Maite, Funk, Sebastian, Henderson, Alasdair D, Brady, Oliver J, Vanhomwegen, Jessica, Manuguerra, Jean-Claude, Lau, Colleen L, Edmunds, W John, Aaskov, John, Nilles, Eric James, Cao-Lormeau, Van-Mai, Hue, Stephane, Hibberd, Martin L

Data from: Global yellow fever vaccination coverage from 1970 to 2016: an adjusted retrospective analysis. (2018) Shearer, Freya M, Moyes, Catherine L, Pigott, David M, Brady, Oliver J., Marinho, Fatima, Deshpande, Aniruddha, Longbottom, Joshua, Browne, Annie J, Kraemer, Moritz U G, O'reilly, Kathleen M., Hombach, Joachim, Yactayo, Sergio, de Araújo, Valdelaine E M, da Nóbrega, Aglaêr A, Mosser, Jonathan F, Stanaway, Jeffrey D, Lim, Stephen S, Hay, Simon I, Golding, Nick, Reiner, Robert C

Database of Plasmodium knowlesi infections recorded in humans, macaque reservoirs and vectors. (2016) Shearer, Freya M., Huang, Zhi, Weiss, Daniel J., Wiebe, Antoinette, Gibson, Harry S., Battle, Katherine E., Pigott, David M., Brady, Oliver J., Putaporntip, Chaturong, Jongwutiwes, Somchai, Lau, Yee Ling, Manske, Magnus, Amato, Roberto, Elyazar, Iqbal R. F., Vythilingam, Indra, Bhatt, Samir, Gething, Peter W., Singh, Balbir, Golding, Nick, Hay, Simon I., Moyes, Catherine L.

Data from: The global compendium of Aedes aegypti and Ae. albopictus occurrence. (2015) Kraemer, Moritz U. G., Sinka, Marianne E., Duda, Kirsten A., Mylne, Adrian, Shearer, Freya M., Brady, Oliver J., Messina, Jane P., Barker, Christopher M., Moore, Chester G., Carvalho, Roberta G., Coelho, Giovanini E., Van Bortel, Wim, Hendrickx, Guy, Schaffner, Francis, Wint, G. R. William, Elyazar, Iqbal R. F., Teng, Hwa-Jen, Hay, Simon I.

Data from: Global distribution maps of the Leishmaniases. (2015) Pigott, David M, Bhatt, Samir, Golding, Nick, Duda, Kirsten A., Battle, Katherine E., Brady, Oliver J., Messina, Jane P., Balard, Yves, Bastien, Patrick, Pratlong, Francine, Brownstein, John S., Freifeld, Clark C, Mekaru, Sumiko R., Gething, Peter W., George, Dylan B., Myers, Monica F., Hay, Simon I.

A comprehensive database of the geographic spread of past human Ebola outbreaks. (2014) Mylne, Adrian, Brady, Oliver J., Huang, Zhi, Pigott, David M, Golding, Nick, Kraemer, Moritz U.G., Hay, Simon I.

Source code for analysis of the zoonotic niche of Ebolavirus. (2014) Pigott, David M, Golding, Nick, Mylne, Adrian, Huang, Zhi, Henry, Andrew J, Weiss, Daniel J, Brady, Oliver J., Kraemer, Moritz UG, Smith, David L, Moyes, Catherine L, Bhatt, Samir, Gething, Peter W, Horby, Peter W, Bogoch, Isaac I, Brownstein, John S, Mekaru, Sumiko R, Tatem, Andrew J, Khan, Kamran, Hay, Simon I

Model of adult Aedes aegypti survival/mortality at different temperatures. (2013) Brady, Oliver J.

Model of adult Aedes albopictus survival/mortality at different temperatures. (2013) Brady, Oliver J.