Items where Data Creator is Thomson, Nick"
Number of items: 25.
3 January 2006
The genome of Rhizobium leguminosarum has recognizable core and accessory components. (2006)
Young, J Peter W, Crossman, Lisa C, Johnston, Andrew WB, Thomson, Nick, Ghazoui, Zara F, Hull, Katherine H, Wexler, Margaret, Curson, Andrew RJ, Todd, Jonathan D, Poole, Philip S, Mauchline, Tim H, East, Alison K, Quail, Michael A, Churcher, Carol, Arrowsmith, Claire, Cherevach, Inna, Chillingworth, Tracey, Clarke, Kay, Cronin, Ann, Davis, Paul, Fraser, Audrey, Hance, Zahra, Hauser, Heidi, Jagels, Kay, Moule, Sharon, Mungall, Karen, Norbertczak, Halina, Rabbinowitsch, Ester, Sanders, Mandy, Simmonds, Mark, Whitehead, Sally, Parkhill, Julian
17 July 2009
A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi. (2009)
Perkins, Timothy T., Kingsley, Robert A., Fookes, Maria C., Gardner, Paul P., James, Keith D., Yu, Lu, Assefa, Samuel A., He, Miao, Croucher, Nicholas J., Pickard, Derek J., Maskell, Duncan J., Parkhill, Julian, Choudhary, Jyoti, Thomson, Nicholas R., Dougan, Gordon
3 November 2011
Sequence-Based Analysis Uncovers an Abundance of Non-Coding RNA in the Total Transcriptome of Mycobacterium tuberculosis. (2011)
Arnvig, Kristine B., Comas, Iñaki, Thomson, Nicholas R., Houghton, Joanna, Boshoff, Helena I., Croucher, Nicholas J., Rose, Graham, Perkins, Timothy T., Parkhill, Julian, Dougan, Gordon, Young, Douglas B.
14 November 2013
Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi. (2013)
Bronowski, Christina, Fookes, Maria C., Gilderthorp, Ruth, Ashelford, Kevin E., Harris, Simon R., Phiri, Amos, Hall, Neil, Gordon, Melita A., Wain, John, Hart, Charles A., Wigley, Paul, Thomson, Nicholas R., Winstanley, Craig
2014
Robust Identification of Noncoding RNA from Transcriptomes Requires Phylogenetically-Informed Sampling. (2014)
Lindgreen, Stinus, Umu, Sinan Uğur, Lai, Alicia Sook-Wei, Eldai, Hisham, Liu, Wenting, McGimpsey, Stephanie, Wheeler, Nicole E., Biggs, Patrick J., Thomson, Nick R., Barquist, Lars, Poole, Anthony M., Gardner, Paul P.
14 August 2015
Directional gene flow and ecological separation in Yersinia enterocolitica. (2015)
Reuter, Sandra, Corander, Jukka, de Been, Mark, Harris, Simon, Cheng, Lu, Hall, Miquette, Thomson, Nicholas R., McNally, Alan
24 November 2015
The introduction and establishment of fluoroquinolone resistant Shigella sonnei into Bhutan. (2015)
Chung The, Hao, Rabaa, Maia A., Pham Thanh, Duy, Ruekit, Sirigade, Wangchuk, Sonam, Dorji, Tshering, Pem Tshering, Kinzang, Nguyen Thi Nguyen, To, Voong Vinh, Phat, Ha Thanh, Tuyen, Nguyen Ngoc Minh, Chau, Turner, Paul, Sar, Poda, Thwaites, Guy, Holt, Kathryn E., Thomson, Nicholas R., Bodhidatta, Ladaporn, Mason, Carl Jeffries, Baker, Stephen
2 August 2017
Assessing gut microbiota perturbations during the early phase of infectious diarrhea in Vietnamese children. (2017)
The, Hao Chung, Florez de Sessions, Paola, Jie, Song, Pham Thanh, Duy, Thompson, Corinne N, Nguyen Ngoc Minh, Chau, Chu, Collins Wenhan, Tran, Tuan-Anh, Thomson, Nicholas R, Thwaites, Guy E, Rabaa, Maia A, Hibberd, Martin, Baker, Stephen
26 October 2017
Genomic history of the seventh pandemic of cholera in Africa. (2017)
Weill, François-Xavier, Domman, Daryl, Njamkepo, Elisabeth, Tarr, Cheryl, Rauzier, Jean, Fawal, Nizar, Keddy, Karen H., Salje, Henrik, Moore, Sandra, Mukhopadhyay, Asish K., Bercion, Raymond, Luquero, Francisco J., Ngandjio, Antoinette, Dosso, Mireille, Monakhova, Elena, Garin, Benoit, Bouchier, Christiane, Pazzani, Carlo, Mutreja, Ankur, Grunow, Roland, Sidikou, Fati, Bonte, Laurence, Breurec, Sébastien, Damian, Maria, Njanpop-Lafourcade, Berthe-Marie, Sapriel, Guillaume, Page, Anne-Laure, Hamze, Monzer, Henkens, Myriam, Chowdhury, Goutam, Mengel, Martin, Koeck, Jean-Louis, Fournier, Jean-Michel, Dougan, Gordon, Grimont, Patrick A. D., Parkhill, Julian, Holt, Kathryn E., Piarroux, Renaud, Ramamurthy, Thandavarayan, Quilici, Marie-Laure, Thomson, Nicholas R.
26 November 2017
Integrated view of Vibrio cholerae in the Americas. (2017)
Domman, Daryl, Quilici, Marie-Laure, Dorman, Matthew J., Njamkepo, Elisabeth, Mutreja, Ankur, Mather, Alison E., Delgado, Gabriella, Morales-Espinosa, Rosario, Grimont, Patrick A. D., Lizárraga-Partida, Marcial Leonardo, Bouchier, Christiane, Aanensen, David M., Kuri-Morales, Pablo, Tarr, Cheryl L., Dougan, Gordon, Parkhill, Julian, Campos, Josefina, Cravioto, Alejandro, Weill, François-Xavier, Thomson, Nicholas R.
6 June 2018
Dhaka household cholera dataset. (2018)
Domman, Daryl, Chowdhury, Fahima, Khan, Ashraful I., Dorman, Matthew J., Mutreja, Ankur, Uddin, Muhammad Ikhtear, Paul, Anik, Begum, Yasmin A., Charles, Richelle C., Calderwood, Stephen B., Bhuiyan, Taufiqur R., Harris, Jason B., LaRocque, Regina C., Ryan, Edward T., Qadri, Firdausi, Thomson, Nicholas R.
1 February 2019
Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii. (2019)
Boinett, Christine J., Cain, Amy K., Hawkey, Jane, Do Hoang, Nhu Tran, Khanh, Nhu Nguyen Thi, Thanh, Duy Pham, Dordel, Janina, Campbell, James I., Lan, Nguyen Phu Huong, Mayho, Matthew, Langridge, Gemma C., Hadfield, James, Chau, Nguyen Van Vinh, Thwaites, Guy E., Parkhill, Julian, Thomson, Nicholas R., Holt, Kathryn E., Baker, Stephen
19 February 2019
Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages. (2019)
Musicha, Patrick, Msefula, Chisomo L, Mather, Alison E, Chaguza, Chrispin, Cain, Amy K, Peno, Chikondi, Kallonen, Teemu, Khonga, Margaret, Denis, Brigitte, Gray, Katherine J, Heyderman, Robert S, Thomson, Nicholas R, Everett, Dean B, Feasey, Nicholas A
4 April 2019
Additional materials from The history, genome and biology of NCTC 30: a non-pandemic Vibrio cholerae isolate from World War One. (2019)
Dorman, Matthew J, Kane, Leanne, Domman, Daryl, Turnbull, Jake D, Cormie, Claire, Fazal, Mohammed-Abbas, Goulding, David A, Russell, Julie E, Alexander, Sarah, Thomson, Nicholas R.
10 April 2019
Supporting data for 'High quality reference genomes for toxigenic and non-toxigenic Vibrio cholerae serogroup O139'. (2019)
Dorman, Matthew J, Domman, Daryl, Uddin, Muhammad Ikhtear, Sharmin, Salma, Hassan Afrad, Mokibul, Begum, Yasmin Ara, Qadri, Firdausi, Thomson, Nicholas R
16 January 2020
Data for, "Genomic surveillance for hypervirulence and multi-drug resistance in invasive Klebsiella pneumoniae from south and southeast Asia.". (2020)
Wyres, Kelly L., Nguyen, To N. T., Lam, Margaret M. C., Judd, Louise M., van Vinh Chau, Nguyen, Dance, David A. B., Ip, Margaret, Karkey, Abhilasha, Ling, Clare L., Miliya, Thyl, Newton, Paul N., Lan, Nguyen Phu Huong, Sengduangphachanh, Amphone, Turner, Paul, Veeraraghavan, Balaji, Vinh, Phat Voong, Vongsouvath, Manivanh, Thomson, Nicholas R., Baker, Stephen, Holt, Kathryn E.
1 October 2020
Supporting data for "Genomics of the Argentinian cholera epidemic elucidate the contrasting dynamics of epidemic and endemic Vibrio cholerae". (2020)
Dorman, Matthew J., Domman, Daryl, Poklepovich, Tomás, Tolley, Charlotte, Zolezzi, Gisella, Kane, Leanne, Viñas, María Rosa, Panagópulo, Marcela, Moroni, Miriam, Binsztein, Norma, Caffer, María Inés, Clare, Simon, Dougan, Gordon, Salmond, George P. C., Parkhill, Julian, Campos, Josefina, Thomson, Nicholas R.
15 August 2024
Additional file 2 of Longitudinal analysis within one hospital in sub-Saharan Africa over 20 years reveals repeated replacements of dominant clones of Klebsiella pneumoniae and stresses the importance to include temporal patterns for vaccine design considerations. (2024)
Heinz, Eva, Pearse, Oliver, Zuza, Allan, Bilima, Sithembile, Msefula, Chisomo, Musicha, Patrick, Siyabu, Patriciah, Tewesa, Edith, Graf, Fabrice E., Lester, Rebecca, Lissauer, Samantha, Cornick, Jennifer, Lewis, Joseph M., Kawaza, Kondwani, Thomson, Nicholas R., Feasey, Nicholas A.