EmilieFinch/dengue-singapore
This repo contains code and data to support Finch et al "Climate variation and serotype competition drive dengue outbreak dynamics in Singapore". This study quantifies the role of climate variation and serotype competition in shaping dengue risk in Singapore using over 20 years of weekly case data, and integrates these findings into an early warning system framework able to predict dengue outbreaks up to 2 months ahead. Model fitting is performed in INLA. Climate and dengue case data are available in the data folder. Note that data on dengue serotype frequencies shown in Figure 1 are not included in this repo as they are not publicly available.
Keywords
dengue; Sinapore| Item Type | Dataset |
|---|---|
| Resource Type |
Resource Type Resource Description Software R script |
| Capture method | Aggregation, Other |
| Date | 2 October 2025 |
| Language(s) of written materials | English |
| Creator(s) |
Finch, E |
| LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Date Deposited | 24 Nov 2025 09:44 |
| Last Modified | 24 Nov 2025 09:44 |
| Publisher | Zenodo |
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- Zenodo (Online Data Resource)
- Github (Data)
- Software Heritage Archive (Data)
No files available. Please consult associated links.
- Zenodo (Online Data Resource)
- Github (Data)
- Software Heritage Archive (Data)