Aksamentov, I, Neher, R, Roemer, C, mt-gitlocalize, Parker, AA, Lin, V, Sibley, T, Negrón, DA, Nextstrain bot, Anderson, JS, Snyk bot, Hodcroft, E, Actat, Rubinsteyn, A, Grüning, B, Tegomoh, B, Chen, C, Bottoms, C, Maguire, F, Huddleston, J, Lee, J, Sanderson, T and Harkins, E. 2024. nextstrain/nextclade. [Online]. Zenodo. Available from: https://doi.org/10.5281/zenodo.5731501
Aksamentov, I, Neher, R, Roemer, C, mt-gitlocalize, Parker, AA, Lin, V, Sibley, T, Negrón, DA, Nextstrain bot, Anderson, JS, Snyk bot, Hodcroft, E, Actat, Rubinsteyn, A, Grüning, B, Tegomoh, B, Chen, C, Bottoms, C, Maguire, F, Huddleston, J, Lee, J, Sanderson, T and Harkins, E. nextstrain/nextclade [Internet]. Zenodo; 2024. Available from: https://doi.org/10.5281/zenodo.5731501
Aksamentov, I, Neher, R, Roemer, C, mt-gitlocalize, Parker, AA, Lin, V, Sibley, T, Negrón, DA, Nextstrain bot, Anderson, JS, Snyk bot, Hodcroft, E, Actat, Rubinsteyn, A, Grüning, B, Tegomoh, B, Chen, C, Bottoms, C, Maguire, F, Huddleston, J, Lee, J, Sanderson, T and Harkins, E (2024). nextstrain/nextclade. [Data Collection]. Zenodo. https://doi.org/10.5281/zenodo.5731501
Description
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
Keywords
| Data capture method | Other |
|---|---|
| Date (Date published in a 3rd party system) | 21 October 2024 |
| Language(s) of written materials | English |
| Data Creators | Aksamentov, I, Neher, R, Roemer, C, mt-gitlocalize, Parker, AA, Lin, V, Sibley, T, Negrón, DA, Nextstrain bot, Anderson, JS, Snyk bot, Hodcroft, E, Actat, Rubinsteyn, A, Grüning, B, Tegomoh, B, Chen, C, Bottoms, C, Maguire, F, Huddleston, J, Lee, J, Sanderson, T and Harkins, E |
|---|---|
| LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Department of Infection Biology |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Date Deposited | 22 Oct 2024 10:30 |
|---|---|
| Last Modified | 22 Oct 2024 10:30 |
| Publisher | Zenodo |
