Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study

London School of Hygiene & Tropical Medicine (2023). Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study. [Dataset]. European Nucleotide Archive. https://www.ebi.ac.uk/ena/browser/view/PRJEB60532
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Data collected as part of a pilot study to test the ability to infer who infected whom from cross-sectional pneumococcal sequences using phylogenetic inference.

Alternative Title

Project: PRJEB60532

Keywords

Phylogenetic inference; pneumococcal sequences

Item Type Dataset
Resource Type
Resource Type
Resource Description
Dataset
Quantitative
Capture method Experiment: Laboratory
Date 10 March 2023
Language(s) of written materials English
Creator(s) London School of Hygiene & Tropical Medicine
Associated roles Hackman, J; Sheppard, C; Phelan, J; Jones-Warner, W; Sobkowiak, B; Shah, S; Litt, D; Fry, NK; Toizumi, M; Yoshida, L; Hibberd, ML; Miller, E; Flasche, S and Hué, S
LSHTM Faculty/Department Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology & Dynamics (2023-)
Faculty of Infectious and Tropical Diseases > Department of Infection Biology
Faculty of Infectious and Tropical Diseases > Dept of Disease Control
Participating Institutions London School of Hygiene & Tropical Medicine, London, United Kingdom
Date Deposited 07 May 2024 13:45
Last Modified 11 Sep 2025 14:31
Publisher European Nucleotide Archive

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