katholt/srst2

Inouye, M, Dashnow, H, Pope, B, Wick, R and Holt, KEORCID logo (2021). katholt/srst2. [Dataset]. Github. https://github.com/katholt/srst2
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Short Read Sequence Typing for Bacterial Pathogens. This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.

Keywords

Short Read Sequence; Bacterial pathogens

No files available. Please consult associated links.


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