Additional file 11 of Impact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce Campylobacter

McKenna, A, Ijaz, UZ, Kelly, C, Linton, M, Sloan, WT, Green, BD, Lavery, U, Dorrell, N

, Richmond, A, Corcionivoschi, N and Gundogdu, O

(2020). Additional file 11 of Impact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce Campylobacter. [Dataset]. Figshare. https://doi.org/10.6084/m9.figshare.12936381.v1

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Additional file 11: Supplementary S11-Pairwise Differential Analysis.xlsx: Differential analysis of genera that are up/down-regulated between different groups (Adjusted P values ≤0.05) with at least log2 fold change from the base mean abundances for the samples considered in the first column.

Keywords

Chicken, Microbiome, Campylobacter, Production systems, Environmental filtering, Phylogenetic signal, Competitive exclusion, Diversity

Item Type	Dataset
Capture method	Experiment
Date	10 September 2020
Language(s) of written materials	English
Creator(s)	McKenna, A, Ijaz, UZ, Kelly, C, Linton, M, Sloan, WT, Green, BD, Lavery, U, Dorrell, N , Wren, BW , Richmond, A, Corcionivoschi, N and Gundogdu, O
LSHTM Faculty/Department	Faculty of Infectious and Tropical Diseases > Department of Infection Biology
Participating Institutions	London School of Hygiene & Tropical Medicine, London, United Kingdom
Date Deposited	14 Sep 2022 16:48
Last Modified	21 Sep 2022 14:03
Publisher	Figshare

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Data record - Figshare (Online Data Resource)

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