skiniry/Trips-Viz
Kiniry, SJ and Judge, C
(2022).
skiniry/Trips-Viz.
[Dataset].
Github.
https://github.com/skiniry/Trips-Viz
Trips-viz is a transcriptome browser designed to visualize Ribosome profiling and RNA-seq data at the level of a single gene/transcript isoform as opposed to at the genome level. Trips-viz also provides you the ability to vizualize data from a gene under different conditions, get meta-information at an individual dataset level such as read length distribution or triplet periodicity, and provides the ability to find differentially expressed or translated genes.
Keywords
Ribo-Seq, RNA sequencingItem Type | Dataset |
---|---|
Capture method | Other |
Date | 9 March 2022 |
Geographical area covered (offline during plugin upgrade) |
North Latitude East Longitude South Latitude West Longitude -8.42634 29.9286 -15.3029 17.2723 |
Language(s) of written materials | English |
Creator(s) | Kiniry, SJ and Judge, C |
LSHTM Faculty/Department | Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology (-2023) |
Research Centre | Centre for the Mathematical Modelling of Infectious Diseases |
Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
Date Deposited | 14 Jun 2022 13:10 |
Last Modified | 26 Nov 2024 13:37 |
Publisher | Github |
Explore Further
- Github (Online Data Resource)
- Software Heritage Archive (Data)
No files available. Please consult associated links.
- Github (Online Data Resource)
- Software Heritage Archive (Data)
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